Query         043989
Match_columns 510
No_of_seqs    164 out of 1843
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 10:20:04 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043989hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.6E-85 5.7E-90  628.0  47.3  452   44-510    25-480 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 3.7E-80 7.9E-85  617.1  46.9  493    5-504    17-520 (543)
  3 PLN02687 flavonoid 3'-monooxyg 100.0 2.7E-79 5.9E-84  609.1  48.7  473   32-510    21-501 (517)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 1.5E-79 3.3E-84  578.4  40.7  460   29-510    16-491 (499)
  5 PLN03234 cytochrome P450 83B1; 100.0 7.9E-79 1.7E-83  605.4  47.1  460   42-510    25-491 (499)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 2.2E-78 4.7E-83  598.8  47.8  462   40-510    26-489 (504)
  7 PLN03112 cytochrome P450 famil 100.0 5.1E-78 1.1E-82  601.3  49.6  475   31-510    18-500 (514)
  8 PLN02183 ferulate 5-hydroxylas 100.0 4.5E-78 9.7E-83  600.2  46.1  456   44-509    35-503 (516)
  9 PTZ00404 cytochrome P450; Prov 100.0 3.1E-77 6.7E-82  591.4  46.0  444   42-507    26-473 (482)
 10 PLN00168 Cytochrome P450; Prov 100.0 1.5E-76 3.2E-81  589.7  49.0  476   28-510    18-509 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 3.6E-76 7.8E-81  586.9  47.1  454   42-504    27-488 (503)
 12 PLN02966 cytochrome P450 83A1  100.0 3.6E-76 7.8E-81  585.1  45.5  453   43-506    27-488 (502)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 4.5E-76 9.8E-81  577.0  36.0  449   43-510    33-488 (497)
 14 PLN02655 ent-kaurene oxidase   100.0 1.8E-74   4E-79  567.5  43.3  446   47-510     1-456 (466)
 15 PLN02290 cytokinin trans-hydro 100.0 9.2E-75   2E-79  578.1  38.8  444   44-510    41-507 (516)
 16 PLN03018 homomethionine N-hydr 100.0 6.8E-73 1.5E-77  560.2  47.5  461   41-506    36-513 (534)
 17 PLN02500 cytochrome P450 90B1  100.0 2.4E-73 5.1E-78  563.8  40.9  421   41-493    34-469 (490)
 18 PF00067 p450:  Cytochrome P450 100.0 3.9E-74 8.5E-79  571.8  32.2  447   47-507     1-457 (463)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 8.4E-73 1.8E-77  519.5  36.9  449   43-510    48-510 (519)
 20 PLN02774 brassinosteroid-6-oxi 100.0 1.6E-72 3.4E-77  553.4  40.1  409   45-493    31-443 (463)
 21 PLN02169 fatty acid (omega-1)- 100.0   3E-72 6.5E-77  553.9  40.3  445   46-510    32-492 (500)
 22 PLN02738 carotene beta-ring hy 100.0 5.3E-71 1.2E-75  552.2  42.5  438   57-510   143-587 (633)
 23 PLN03195 fatty acid omega-hydr 100.0 2.1E-71 4.6E-76  553.5  39.3  450   46-509    31-507 (516)
 24 PLN02196 abscisic acid 8'-hydr 100.0 4.1E-71 8.8E-76  542.8  40.6  419   42-509    32-454 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0   7E-70 1.5E-74  533.5  39.6  417   41-492     3-429 (452)
 26 PLN02987 Cytochrome P450, fami 100.0   4E-69 8.7E-74  526.5  41.7  443   23-509     9-460 (472)
 27 PLN02936 epsilon-ring hydroxyl 100.0 3.4E-69 7.4E-74  532.4  40.8  446   46-509    13-473 (489)
 28 PLN02302 ent-kaurenoic acid ox 100.0 1.5E-68 3.2E-73  532.2  43.3  415   41-491    38-464 (490)
 29 KOG0684 Cytochrome P450 [Secon 100.0 1.8E-68   4E-73  478.2  33.2  438   45-510    31-477 (486)
 30 PLN02426 cytochrome P450, fami 100.0 2.6E-67 5.5E-72  517.8  40.0  432   53-510    49-492 (502)
 31 PLN02648 allene oxide synthase 100.0 6.9E-60 1.5E-64  457.6  31.3  402   42-493    14-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 7.3E-54 1.6E-58  411.1  31.8  359   66-491    24-387 (411)
 33 PF12554 MOZART1:  Mitotic-spin  62.5      25 0.00053   22.0   4.3   44  310-353     5-48  (48)
 34 PF09201 SRX:  SRX;  InterPro:   58.3       9 0.00019   29.8   2.3   22  461-482    18-39  (148)
 35 PF12508 DUF3714:  Protein of u  53.8     3.6 7.8E-05   35.0  -0.5   43  370-414    52-94  (200)
 36 PF05568 ASFV_J13L:  African sw  53.3      12 0.00026   29.2   2.3   29    6-34     22-50  (189)
 37 PRK06789 flagellar motor switc  52.4      16 0.00036   25.3   2.6   40  376-415    21-62  (74)
 38 PF05952 ComX:  Bacillus compet  43.8      22 0.00048   23.1   2.0   24  334-357     5-28  (57)
 39 PF01102 Glycophorin_A:  Glycop  37.8      33 0.00071   26.6   2.6   24   16-39     71-94  (122)
 40 PF03597 CcoS:  Cytochrome oxid  37.5      96  0.0021   19.1   4.1   27   16-42      5-31  (45)
 41 TIGR00847 ccoS cytochrome oxid  37.4      80  0.0017   20.1   3.8   26   16-41      6-31  (51)
 42 KOG3506 40S ribosomal protein   37.2      15 0.00032   23.3   0.5   11  454-464    12-22  (56)
 43 PF05961 Chordopox_A13L:  Chord  33.9 1.2E+02  0.0025   20.5   4.2   26   14-39      2-27  (68)
 44 PHA03049 IMV membrane protein;  33.8 1.2E+02  0.0026   20.3   4.2   22   17-38      5-26  (68)
 45 PF05393 Hum_adeno_E3A:  Human   32.4      74  0.0016   22.7   3.3    6   52-57     66-71  (94)
 46 PF11346 DUF3149:  Protein of u  32.2      60  0.0013   19.6   2.5   28   10-37      7-34  (42)
 47 PF13625 Helicase_C_3:  Helicas  30.5 1.3E+02  0.0029   23.5   5.1   43   63-107    73-115 (129)
 48 PRK14740 kdbF potassium-transp  29.5   1E+02  0.0022   16.7   3.4   23   15-37      2-24  (29)
 49 PF14129 DUF4296:  Domain of un  29.2 2.2E+02  0.0048   20.4   6.3   49  308-356    30-78  (87)
 50 COG0851 MinE Septum formation   29.1 1.1E+02  0.0024   22.0   3.8   21  342-362    36-56  (88)
 51 PF15330 SIT:  SHP2-interacting  29.1 1.3E+02  0.0028   22.8   4.4   41   21-61      9-54  (107)
 52 COG3197 FixS Uncharacterized p  28.3 1.3E+02  0.0029   19.6   3.7   25   16-40      6-30  (58)
 53 PF04688 Phage_holin:  Phage ly  28.3 1.2E+02  0.0026   18.9   3.5   32    6-37      2-33  (47)
 54 PRK09458 pspB phage shock prot  28.2 1.4E+02  0.0031   20.7   4.1   22   17-38      7-28  (75)
 55 PF11227 DUF3025:  Protein of u  27.6      34 0.00074   29.3   1.3   20  417-436   192-211 (212)
 56 TIGR03779 Bac_Flav_CT_M Bacter  26.1      15 0.00033   35.1  -1.1   43  370-414   255-297 (410)
 57 PF13893 RRM_5:  RNA recognitio  25.4 1.8E+02   0.004   18.3   4.4   34   71-104     2-39  (56)
 58 PF14483 Cut8_M:  Cut8 dimerisa  24.8 1.1E+02  0.0024   18.0   2.7   17  334-350    18-35  (38)
 59 PRK05933 type III secretion sy  24.3      76  0.0016   29.2   2.9   44  372-415   316-362 (372)
 60 PF14991 MLANA:  Protein melan-  23.4      27 0.00059   26.2   0.0   23   20-42     32-54  (118)
 61 PF07886 BA14K:  BA14K-like pro  22.6      78  0.0017   17.7   1.7   16  449-464    16-31  (31)
 62 PRK14750 kdpF potassium-transp  22.6 1.4E+02  0.0031   16.1   3.2   21   16-36      3-23  (29)
 63 COG1759 5-formaminoimidazole-4  22.0 1.4E+02   0.003   27.6   4.0   70  373-477   275-351 (361)
 64 PF08285 DPM3:  Dolichol-phosph  22.0 1.3E+02  0.0029   21.9   3.3   28  329-356    54-81  (91)
 65 COG1886 FliN Flagellar motor s  21.1      93   0.002   24.8   2.6   43  373-415    82-126 (136)
 66 COG1707 ACT domain-containing   20.2 1.2E+02  0.0025   24.8   2.9   41   63-103   153-198 (218)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-85  Score=628.01  Aligned_cols=452  Identities=44%  Similarity=0.773  Sum_probs=398.2

Q ss_pred             CCCCCCCCCCcccccccccCCc-hHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCc-cccee
Q 043989           44 TPQPPGPRGLPLIGYLPFLGND-LHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAP-IASLV  121 (510)
Q Consensus        44 ~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~-~~~~~  121 (510)
                      .+.||||+++|++||+.++... .+..+.++.++|||+|.+|+|..++|+|+|++.+++++.+++..|+.|+.. .....
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            6699999999999999999776 999999999999999999999999999999999999999999999999872 23344


Q ss_pred             eecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh
Q 043989          122 STYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLINVIQNMLW  201 (510)
Q Consensus       122 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~~i~~~~f  201 (510)
                      ..+++.+++++++|+.|+.+||.....+++...+++....-.++++.+++.+.+.+.++.||+...+..++.++|++++|
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~f  184 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLF  184 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHh
Confidence            55578899999899999999999999899999999888878999999999998631227999999999999999999999


Q ss_pred             ccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccc-cccccC-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 043989          202 GGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFP-VLSRFD-IQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKG  279 (510)
Q Consensus       202 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  279 (510)
                      |.++. ..+. +....+.+.+.+.......+.+.+++| ++.++. ..+..+........+.++++..|+++++..+   
T Consensus       185 G~rf~-~~~~-~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~---  259 (489)
T KOG0156|consen  185 GRRFE-EEDE-EEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIG---  259 (489)
T ss_pred             CCccc-cCCc-hHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---
Confidence            99998 4432 455668888888888888888888999 566654 3355666666777799999999999988751   


Q ss_pred             CCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC
Q 043989          280 AAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGME  359 (510)
Q Consensus       280 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  359 (510)
                        .  +...|+++.||+...++.... +++++|.+.+..+++||.|||++++.|++.+|++||++|+|+++||++++|.+
T Consensus       260 --~--~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~  334 (489)
T KOG0156|consen  260 --D--EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG  334 (489)
T ss_pred             --c--CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence              1  112899999999866433233 99999999999999999999999999999999999999999999999999988


Q ss_pred             CccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCccccc
Q 043989          360 TFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFLN  439 (510)
Q Consensus       360 ~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  439 (510)
                      +.++.+|+.+||||+|||+||+|++|++|..+||.+.+|+.|+||.|||||.|++|.|++|+||++|+||++|+||||++
T Consensus       335 r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~  414 (489)
T KOG0156|consen  335 RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLD  414 (489)
T ss_pred             CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcC
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCCC
Q 043989          440 DARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       440 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (510)
                      ++   +.......++|||.|+|+|||..+|.+|+..+++.++++|||+++.+ .+++.+. ++++.+++|+
T Consensus       415 ~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl  480 (489)
T KOG0156|consen  415 SN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPL  480 (489)
T ss_pred             Cc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcc
Confidence            64   11235678999999999999999999999999999999999999888 7788888 4778877764


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=3.7e-80  Score=617.07  Aligned_cols=493  Identities=26%  Similarity=0.500  Sum_probs=374.6

Q ss_pred             cccccccccchHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcccccccccCC--chHHHHHHHHhhcC-CeE
Q 043989            5 GYHPCYEKDLNFTAIISALVGMLAVIFFWWKTKRSSKACTPQPPGPRGLPLIGYLPFLGN--DLHKSFTELAGVYG-PVY   81 (510)
Q Consensus         5 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~kyG-~v~   81 (510)
                      +--|+|..+....++.++++.++++++++.....+.+++.+.||||+++|++|++..+..  ..+.++.++.++|| ++|
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~   96 (543)
T PLN02971         17 PGTSSFTNMYLLTTLQALVAITLLMILKKLKSSSRNKKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIA   96 (543)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceE
Confidence            334555544444444333333333444444444444456678999999999999887633  34678889999999 799


Q ss_pred             EEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHH
Q 043989           82 KLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSL  161 (510)
Q Consensus        82 ~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~  161 (510)
                      ++++|++++|+|+||+.+++++.++...|++++........+.+..++++..+|+.|+++||.+.+.++++..++.+.+.
T Consensus        97 ~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~  176 (543)
T PLN02971         97 CVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDN  176 (543)
T ss_pred             EEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            99999999999999999999999887778877653332222222223456667999999999997757777677778888


Q ss_pred             HHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHHHHhccccccCCC---cchHHHHHHHHHHHHHHhhc---CCCc
Q 043989          162 RKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQNMLWGGVLELGER---GTNVVAELKNKLAELMVLVA---TPNI  234 (510)
Q Consensus       162 i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~  234 (510)
                      +.++++.+++.+.+. ..++++|+.+.+.+++++++++++||.++. ...   +.+......+.+...+....   ...+
T Consensus       177 ~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (543)
T PLN02971        177 RAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRLMFGTRTF-SEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCI  255 (543)
T ss_pred             HHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHhCCccc-ccccccccchhHHHHHHHHHHHHHHHhccCCcH
Confidence            888888888887653 345679999999999999999999998764 221   00111122223333332211   1223


Q ss_pred             ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHH
Q 043989          235 SDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKA  314 (510)
Q Consensus       235 ~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~  314 (510)
                      ..++|++++++..+..+...+..+.+.+++...++++++....    +......|+++.|++...+ +....+++++|.+
T Consensus       256 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~d~l~~ll~~~~~-~~~~~ls~~~i~~  330 (543)
T PLN02971        256 SDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWRE----GKRTQIEDFLDIFISIKDE-AGQPLLTADEIKP  330 (543)
T ss_pred             HHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCCCcCHHHHHHhhhcc-cCCCCCCHHHHHH
Confidence            3456666554332334455556777888888888887764321    1012246999999986432 1122489999999


Q ss_pred             HHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccc
Q 043989          315 LIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRS  394 (510)
Q Consensus       315 ~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~  394 (510)
                      ++..+++||+|||+++++|++++|++||++|+|+++||+++++.++.++++++++|||++|||+||||++|+++..++|.
T Consensus       331 ~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~  410 (543)
T PLN02971        331 TIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHV  410 (543)
T ss_pred             hHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCccee
Confidence            99999999999999999999999999999999999999999987788999999999999999999999999999877899


Q ss_pred             cccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHH
Q 043989          395 SIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLM  474 (510)
Q Consensus       395 ~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~  474 (510)
                      +.+|++++||.|||||.|++++|++||||++|+||++|+||||++++.+......+..|+|||+|+|.|+|++||++|++
T Consensus       411 ~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~  490 (543)
T PLN02971        411 ALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITT  490 (543)
T ss_pred             cCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999653221111234579999999999999999999999


Q ss_pred             HHHHHHHHhcceecCCC-CCCCCCcccceEe
Q 043989          475 FVLASLLHSFEWKLPTG-TKLDLSEKFGIVI  504 (510)
Q Consensus       475 ~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~  504 (510)
                      +++++||++|+|++.++ ..++..+.++ ++
T Consensus       491 ~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~  520 (543)
T PLN02971        491 MMLARLLQGFKWKLAGSETRVELMESSH-DM  520 (543)
T ss_pred             HHHHHHHHhCEEEeCCCCCCcchhhhcC-cc
Confidence            99999999999998765 3577777777 54


No 3  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.7e-79  Score=609.08  Aligned_cols=473  Identities=38%  Similarity=0.711  Sum_probs=377.4

Q ss_pred             HHhhcccCCCCCCCCCCCCCCCcccccccccCCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccc
Q 043989           32 FWWKTKRSSKACTPQPPGPRGLPLIGYLPFLGNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFA  111 (510)
Q Consensus        32 ~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~  111 (510)
                      +++...+..++..+.||||.++|++|++..+..+++..+.+++++||++|+++++++++++++||+++++++.++...|.
T Consensus        21 ~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~  100 (517)
T PLN02687         21 LLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFS  100 (517)
T ss_pred             HHhccccCCCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhh
Confidence            33333334445556899999999999998887778999999999999999999999999999999999999998766777


Q ss_pred             cCCCcccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHH
Q 043989          112 NRDAPIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNNNIGKPIDIGELSIST  191 (510)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~  191 (510)
                      +++...........+.++++..+|+.|+++|+.+.+..|+.++++.+.+.+.++++++++.+....+++.+|+.+++..+
T Consensus       101 ~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~  180 (517)
T PLN02687        101 NRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVC  180 (517)
T ss_pred             cCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHH
Confidence            76543322222222345566667999999999998338999999999999999999999999764345789999999999


Q ss_pred             HHHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 043989          192 LINVIQNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQY  271 (510)
Q Consensus       192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  271 (510)
                      ++|+++.++||.++. ..+.......+.+.+..++..........++|++.++......++..+..+.+.+++..+++++
T Consensus       181 t~dvi~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r  259 (517)
T PLN02687        181 TTNALGRAMVGRRVF-AGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEH  259 (517)
T ss_pred             HHHHHHHHHhCcccc-ccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999875 3322123345666666655543332233456655444332233456667788888999999888


Q ss_pred             HhhhcccCCCCCCCCcccHHHHHHhhcccC---CCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHH
Q 043989          272 RNKVSVKGAAGDTEGKKDFLQFLLELQENE---DSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKV  348 (510)
Q Consensus       272 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l  348 (510)
                      ++....     +.+...|+++.+++...++   .++..++++++.+++..+++||+|||+++++|++|+|++||++|+++
T Consensus       260 ~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl  334 (517)
T PLN02687        260 KAAGQT-----GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKA  334 (517)
T ss_pred             HHhccc-----cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHH
Confidence            765421     1234579999999865431   12346999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCC
Q 043989          349 MKELAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDN  428 (510)
Q Consensus       349 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~d  428 (510)
                      ++||+++.+.++.++.+++++||||+|||+||||++|+++..++|++.+|++++|+.||+||.|.++.+++||||++|+|
T Consensus       335 ~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~d  414 (517)
T PLN02687        335 QEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPD  414 (517)
T ss_pred             HHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCC
Confidence            99999999877788999999999999999999999999998778999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCCCC--ccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCC---CCCCCcccceE
Q 043989          429 PLEFQPERFLNDARGF--DYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGT---KLDLSEKFGIV  503 (510)
Q Consensus       429 p~~F~P~R~l~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~  503 (510)
                      |++|+||||++++...  .....+..++|||+|+|+|+|++||++|+++++++||++|++++.++.   ++++...++++
T Consensus       415 p~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  494 (517)
T PLN02687        415 PLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLT  494 (517)
T ss_pred             cccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCccccccee
Confidence            9999999999643211  111234579999999999999999999999999999999999988764   23344456777


Q ss_pred             eecCCCC
Q 043989          504 IKKKEPL  510 (510)
Q Consensus       504 ~~~~~~~  510 (510)
                      ++++.++
T Consensus       495 ~~~~~~~  501 (517)
T PLN02687        495 LQRAVPL  501 (517)
T ss_pred             eecCCCe
Confidence            7776553


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-79  Score=578.41  Aligned_cols=460  Identities=27%  Similarity=0.422  Sum_probs=352.6

Q ss_pred             HHHHHhhcccCCCCCCCCCCCCCCCccccccccc--CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhC
Q 043989           29 VIFFWWKTKRSSKACTPQPPGPRGLPLIGYLPFL--GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDK  106 (510)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~  106 (510)
                      ++++++.+....+. .+.+|||+++|++|+...+  .+.......+...++|+++.++.+-++.++|+||+.+++|+.++
T Consensus        16 l~y~~~~~~~~yw~-rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~   94 (499)
T KOG0158|consen   16 LLYLWLRWTYSYWR-RRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKD   94 (499)
T ss_pred             HHHHHHHhhhhhhc-cCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHh
Confidence            33444433333333 2388999999999999887  23234454454555599999999999999999999999999999


Q ss_pred             CCccccCCCcccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchH
Q 043989          107 DMIFANRDAPIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIG  185 (510)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~  185 (510)
                      .++|.++..........-.....++..+|+.||++|..+.| .|+...++++.+.+.+..+++++.+.+. ..+..+++.
T Consensus        95 F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP-~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~  173 (499)
T KOG0158|consen   95 FDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSP-TFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIK  173 (499)
T ss_pred             CccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhcc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHH
Confidence            88888843211111110011233445569999999999998 9999999999999999999999999875 222578889


Q ss_pred             HHHHHHHHHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHh-hcCCCc----ccccccccccChhHHHHHHHHHHHHH
Q 043989          186 ELSISTLINVIQNMLWGGVLELGERGTNVVAELKNKLAELMVL-VATPNI----SDFFPVLSRFDIQRIERRTMKIFHWF  260 (510)
Q Consensus       186 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~l~~~~~~~~~~~~~~~~~~l  260 (510)
                      +.+.+++.|+|++++||.+.+ +..+  ....+.......+.. .....+    ...+|.+....  .......+..+.+
T Consensus       174 dl~~~yT~DVI~~~AfG~~~~-s~~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~  248 (499)
T KOG0158|consen  174 DLCARYTTDVIGSCAFGLDAN-SLRD--PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFF  248 (499)
T ss_pred             HHHHHHHHHHHhHhhcccchh-hhcC--chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHH
Confidence            999999999999999998877 4443  223444433333332 111111    11223322210  0112223334555


Q ss_pred             HHHHHHHHHHHHhhhcccCCCCCCCCcccHHHHHHhhccc---CCCCC-CCcHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 043989          261 DNIVNCAIEQYRNKVSVKGAAGDTEGKKDFLQFLLELQEN---EDSAS-SISIIQIKALIQDIITGGTDTTTTMVEWTMA  336 (510)
Q Consensus       261 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~-~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~  336 (510)
                      .+.+...++.|.++         ...++|+++.|++++.+   +.... .+|.++|+++++.|++||.||||+++++++|
T Consensus       249 ~~~v~~~v~~R~~~---------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lY  319 (499)
T KOG0158|consen  249 RKLVNSRVEQREKE---------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALY  319 (499)
T ss_pred             HHHHHHHHHHHHhc---------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence            55555555555221         35789999999998753   11122 5999999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceec-CeeeCCCCEEEEe
Q 043989          337 ELMQHPEVMKKVMKELAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIG-GYNIPKGTKLLLN  415 (510)
Q Consensus       337 ~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~-g~~Ip~g~~v~~~  415 (510)
                      +||+||++|+|||+||+++......+++|.+++|+||++||+||||+||+++.. .|.|++|+++. ++.||||+.|.++
T Consensus       320 eLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip  398 (499)
T KOG0158|consen  320 ELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIP  398 (499)
T ss_pred             HHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEee
Confidence            999999999999999999976544599999999999999999999999999995 79999999999 9999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCC
Q 043989          416 VWAIHRDPQFWDNPLEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLD  495 (510)
Q Consensus       416 ~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~  495 (510)
                      ++++||||++||||++|+||||++++.+   ...+..|+|||.|||.|+|.+||.+|+|+.|++||++|+++..+ ..++
T Consensus       399 ~~alH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~  474 (499)
T KOG0158|consen  399 TYALHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTII  474 (499)
T ss_pred             cccccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccC
Confidence            9999999999999999999999976543   33567899999999999999999999999999999999999877 3333


Q ss_pred             CCccc---ceEeecCCCC
Q 043989          496 LSEKF---GIVIKKKEPL  510 (510)
Q Consensus       496 ~~~~~---~~~~~~~~~~  510 (510)
                      . ..+   +.++.|++|+
T Consensus       475 ~-~~~~~~~~~l~pk~gi  491 (499)
T KOG0158|consen  475 P-LEGDPKGFTLSPKGGI  491 (499)
T ss_pred             c-ccCCccceeeecCCce
Confidence            3 555   8889999875


No 5  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=7.9e-79  Score=605.40  Aligned_cols=460  Identities=32%  Similarity=0.610  Sum_probs=370.0

Q ss_pred             CCCCCCCCCCCCcccccccccCC-chHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccce
Q 043989           42 ACTPQPPGPRGLPLIGYLPFLGN-DLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASL  120 (510)
Q Consensus        42 ~~~~~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~  120 (510)
                      ++.+.||||+++|++|++..+.. +++.++.+++++||++|++++++.+.|+++||+++++++.++...|..++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            34567999999999999988854 67889999999999999999999999999999999999998877777666533222


Q ss_pred             eeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHHH
Q 043989          121 VSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQNM  199 (510)
Q Consensus       121 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~~  199 (510)
                      ...+.+..+.+...++.|+++|+.+...+|+++++..+.+.+.++++++++.+.+. .+++.+|+.+++..+++|+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence            21222233334455899999999864348999999999999999999999999754 45678999999999999999999


Q ss_pred             HhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccC-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043989          200 LWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFD-IQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVK  278 (510)
Q Consensus       200 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  278 (510)
                      +||.+++ ....  ....+.+.+.+.........+...+|++..+. +.+..++..++.+.+.++++..++++++...  
T Consensus       185 ~fG~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  259 (499)
T PLN03234        185 AFGKRYN-EYGT--EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR--  259 (499)
T ss_pred             HhCCccc-ccch--hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence            9998876 3322  23445555555443333223334455543321 2233456778888999999999988765421  


Q ss_pred             CCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC
Q 043989          279 GAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGM  358 (510)
Q Consensus       279 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  358 (510)
                         . .....|+++.+++..+++..+..+++++|.+++..+++||+|||+++++|++++|++||++|+++++|++++.++
T Consensus       260 ---~-~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~  335 (499)
T PLN03234        260 ---P-KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD  335 (499)
T ss_pred             ---c-CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence               1 123578999999765432223468999999999999999999999999999999999999999999999999987


Q ss_pred             CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCccc
Q 043989          359 ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFW-DNPLEFQPERF  437 (510)
Q Consensus       359 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~  437 (510)
                      ++.++++++++||||+|||+|+||++|+++..++|.+.+|++++|+.|||||.|+++++.+||||++| +||++|+||||
T Consensus       336 ~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~  415 (499)
T PLN03234        336 KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERF  415 (499)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhh
Confidence            77889999999999999999999999999987679999999999999999999999999999999999 89999999999


Q ss_pred             ccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCC---CCCCCcccceEeecCCCC
Q 043989          438 LNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGT---KLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       438 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~  510 (510)
                      ++++.+.+....+..++|||+|+|+|+|+++|++|+++++++|+++|+++++++.   .+.....+++.++|+++|
T Consensus       416 l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (499)
T PLN03234        416 MKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHL  491 (499)
T ss_pred             cCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCe
Confidence            9754322223345689999999999999999999999999999999999998762   344555678888887764


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.2e-78  Score=598.83  Aligned_cols=462  Identities=37%  Similarity=0.723  Sum_probs=373.1

Q ss_pred             CCCCCCCCCCCCCCcccccccccCCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccc
Q 043989           40 SKACTPQPPGPRGLPLIGYLPFLGNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIAS  119 (510)
Q Consensus        40 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~  119 (510)
                      .....+.||||+++|++|++..+..+.+.++.+++++||++|++++++++.|+|+||+++++++.++...|+.++.....
T Consensus        26 ~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~  105 (504)
T PLN00110         26 PKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA  105 (504)
T ss_pred             hcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence            34445689999999999998877767889999999999999999999999999999999999999877677777653322


Q ss_pred             eeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHH
Q 043989          120 LVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQN  198 (510)
Q Consensus       120 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~  198 (510)
                      .....++.+++++.+|+.|+++|+.+.+.+|+.+.++.+.+.+.+++..+++.+.+. .+|+.+|+.+++..+++|+|++
T Consensus       106 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~  185 (504)
T PLN00110        106 THLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQ  185 (504)
T ss_pred             hhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHH
Confidence            212223334555667999999999998668999999999999999999999998764 4567899999999999999999


Q ss_pred             HHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043989          199 MLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVK  278 (510)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  278 (510)
                      ++||.++. ...+ .....+.+.+...+.......+..++|++.++......++..+..+.+.+++...++++++...  
T Consensus       186 ~~fg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  261 (504)
T PLN00110        186 VILSRRVF-ETKG-SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH--  261 (504)
T ss_pred             HHhCCccc-ccCc-hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence            99998763 2222 2234566666655544333333345665544333333455566677788888888887765432  


Q ss_pred             CCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC
Q 043989          279 GAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGM  358 (510)
Q Consensus       279 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  358 (510)
                         . .....|+++.+++.... +++..++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++++.
T Consensus       262 ---~-~~~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  336 (504)
T PLN00110        262 ---E-RKGNPDFLDVVMANQEN-STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR  336 (504)
T ss_pred             ---c-cccCCChhhHHhhcccc-cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence               1 12346999999975432 234569999999999999999999999999999999999999999999999999987


Q ss_pred             CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccc
Q 043989          359 ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFL  438 (510)
Q Consensus       359 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  438 (510)
                      ++.++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||+
T Consensus       337 ~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  416 (504)
T PLN00110        337 NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFL  416 (504)
T ss_pred             CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccccc
Confidence            77789999999999999999999999999986689999999999999999999999999999999999999999999999


Q ss_pred             cCCCCC-ccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCCC
Q 043989          439 NDARGF-DYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       439 ~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (510)
                      +++... ....+...++|||+|+|.|+|++||.+|+++++++|+++|++++.++.++++...++++++|+.|+
T Consensus       417 ~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (504)
T PLN00110        417 SEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPL  489 (504)
T ss_pred             CCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCc
Confidence            643211 111123579999999999999999999999999999999999998876655555678888887764


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.1e-78  Score=601.29  Aligned_cols=475  Identities=32%  Similarity=0.604  Sum_probs=377.2

Q ss_pred             HHHhhcccCCCCCCCCCCCCCCCcccccccccCCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCcc
Q 043989           31 FFWWKTKRSSKACTPQPPGPRGLPLIGYLPFLGNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIF  110 (510)
Q Consensus        31 ~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~  110 (510)
                      .+|++.+++..++.+.||||+++|++|++..+..+++..+.+++++||++|++++++.+.++++||+.+++++.++...|
T Consensus        18 ~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f   97 (514)
T PLN03112         18 LIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVF   97 (514)
T ss_pred             HHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCccc
Confidence            34444555566667889999999999999888777899999999999999999999999999999999999998877778


Q ss_pred             ccCCCcccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHH
Q 043989          111 ANRDAPIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSI  189 (510)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~  189 (510)
                      ++++.........++..++++..+|+.|+++|+.+.+..|+.++++.+.+.+.++++.+++.+.+. ..++.+|+.+++.
T Consensus        98 ~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~  177 (514)
T PLN03112         98 ASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLG  177 (514)
T ss_pred             ccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHH
Confidence            766554322222233334445567999999999976558999999999999999999999987654 4567899999999


Q ss_pred             HHHHHHHHHHHhccccccCCCc--chHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHH
Q 043989          190 STLINVIQNMLWGGVLELGERG--TNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCA  267 (510)
Q Consensus       190 ~~~~~~i~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~  267 (510)
                      .+++++++.++||.++. ....  .+....+.+.+..++.......+..++|++.++......++..++.+.+.++++..
T Consensus       178 ~~~~~vi~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
T PLN03112        178 AFSMNNVTRMLLGKQYF-GAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKI  256 (514)
T ss_pred             HHHHHHHHHHHcCCccc-cccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998874 2221  12234455555555544332233345565544432233456667778888889999


Q ss_pred             HHHHHhhhcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHH
Q 043989          268 IEQYRNKVSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKK  347 (510)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~  347 (510)
                      ++++++..+..   .......|+++.++++..+ +....++++++.++++.+++||+|||+++++|++++|++||++|++
T Consensus       257 i~~~~~~~~~~---~~~~~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~k  332 (514)
T PLN03112        257 IDEHRRARSGK---LPGGKDMDFVDVLLSLPGE-NGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRK  332 (514)
T ss_pred             HHHHHHhhccc---ccCCccchHHHHHHHhhcc-ccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHH
Confidence            88877653211   1112346999999986533 1223589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCC
Q 043989          348 VMKELAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWD  427 (510)
Q Consensus       348 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~  427 (510)
                      +++||+++++.++.++++++++|||++|||+||||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+
T Consensus       333 l~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~  412 (514)
T PLN03112        333 IQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWD  412 (514)
T ss_pred             HHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCC
Confidence            99999999987778999999999999999999999999999866899999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCCC-c-cCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCC---CCCCCcccce
Q 043989          428 NPLEFQPERFLNDARGF-D-YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGT---KLDLSEKFGI  502 (510)
Q Consensus       428 dp~~F~P~R~l~~~~~~-~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~  502 (510)
                      ||++|+||||.++.+.. . ......+++|||+|+|+|||++||++|++++++++|++|+|++..+.   .+.....+++
T Consensus       413 dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  492 (514)
T PLN03112        413 DVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGM  492 (514)
T ss_pred             ChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCc
Confidence            99999999987532111 1 01234579999999999999999999999999999999999987653   3444556788


Q ss_pred             EeecCCCC
Q 043989          503 VIKKKEPL  510 (510)
Q Consensus       503 ~~~~~~~~  510 (510)
                      ++++++++
T Consensus       493 ~~~~~~~~  500 (514)
T PLN03112        493 TMPKAKPL  500 (514)
T ss_pred             ccccCCCe
Confidence            88776653


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=4.5e-78  Score=600.23  Aligned_cols=456  Identities=38%  Similarity=0.689  Sum_probs=358.5

Q ss_pred             CCCCCCCCCCcccccccccCCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceeee
Q 043989           44 TPQPPGPRGLPLIGYLPFLGNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVST  123 (510)
Q Consensus        44 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~  123 (510)
                      .+.||||+++|++|++..+....+.++.+++++||++|++++++.+.|+|+||+++++++.++...|+.++.........
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~  114 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLT  114 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccc
Confidence            46899999999999988776556778999999999999999999999999999999999998766676665432222121


Q ss_pred             cCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc
Q 043989          124 YGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLINVIQNMLWGG  203 (510)
Q Consensus       124 ~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~  203 (510)
                      .++.+.+++.+|+.|+++|+.+...+|+.+.++.+.+. .++++.+++.+... .|+++|+.+++..+++|++++++||.
T Consensus       115 ~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~vi~~~~fG~  192 (516)
T PLN02183        115 YDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN-IGKPVNIGELIFTLTRNITYRAAFGS  192 (516)
T ss_pred             cCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc-CCCcEeHHHHHHHHHHHHHHhHhhcC
Confidence            12234455667999999999854348999999988875 56889999998653 46789999999999999999999998


Q ss_pred             ccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-CC
Q 043989          204 VLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGA-AG  282 (510)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~-~~  282 (510)
                      +.+ ..     ...+.+.+..+............+|++.++......++..+..+.+.+++...+++++++..+... ..
T Consensus       193 ~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  266 (516)
T PLN02183        193 SSN-EG-----QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADND  266 (516)
T ss_pred             ccc-ch-----HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            765 21     134555555444443333334456665543222234566677788888888888887664321111 01


Q ss_pred             CCCCcccHHHHHHhhcccCC---------CCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHH
Q 043989          283 DTEGKKDFLQFLLELQENED---------SASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELA  353 (510)
Q Consensus       283 ~~~~~~d~l~~ll~~~~~~~---------~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  353 (510)
                      ..+...|+++.+++...++.         ....++++++.+++..+++||+|||+++++|++|+|++||++|+|+++||+
T Consensus       267 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~  346 (516)
T PLN02183        267 SEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELA  346 (516)
T ss_pred             cccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            11234689999998543210         123589999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCC
Q 043989          354 EVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQ  433 (510)
Q Consensus       354 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~  433 (510)
                      ++++.++.++++++++||||+|||+||||++|+++.. .|++.+|++++|+.|||||.|.++.+++||||++|+||++|+
T Consensus       347 ~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~  425 (516)
T PLN02183        347 DVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFK  425 (516)
T ss_pred             HHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccC
Confidence            9998667789999999999999999999999999987 599999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCC---CCCCcccceEeecCCC
Q 043989          434 PERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTK---LDLSEKFGIVIKKKEP  509 (510)
Q Consensus       434 P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~  509 (510)
                      ||||++++.. +...+...|+|||+|+|.|+|++||++|+++++++|+++|++++.++..   +.....|+.+..++++
T Consensus       426 PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (516)
T PLN02183        426 PSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATR  503 (516)
T ss_pred             chhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCC
Confidence            9999964321 1123456799999999999999999999999999999999999877642   3344456666544444


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.1e-77  Score=591.35  Aligned_cols=444  Identities=25%  Similarity=0.425  Sum_probs=354.1

Q ss_pred             CCCCCCCCCCCCcccccccccCCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCccccee
Q 043989           42 ACTPQPPGPRGLPLIGYLPFLGNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLV  121 (510)
Q Consensus        42 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~  121 (510)
                      .....+|||+++|++|++..+..+++..+.+++++||++|++++++.+.|+++||+++++++.++...|..++.......
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            34567899999999999988877889999999999999999999999999999999999999876656665544322211


Q ss_pred             eecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHHHH
Q 043989          122 STYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQNML  200 (510)
Q Consensus       122 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~~~  200 (510)
                      .. .+.+++.. +|+.|+++|+.+.+ .|+...++.+.+.+.+.++.+++.+.+. ..++.+|+.+++.++++|+++.++
T Consensus       106 ~~-~~~~l~~~-~g~~w~~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  182 (482)
T PTZ00404        106 GT-FYHGIVTS-SGEYWKRNREIVGK-AMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYI  182 (482)
T ss_pred             ec-cCCceecc-ChHHHHHHHHHHHH-HHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Confidence            12 24565544 69999999999988 8999999999999999999999999754 356779999999999999999999


Q ss_pred             hccccccCCCc--chHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043989          201 WGGVLELGERG--TNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVK  278 (510)
Q Consensus       201 fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  278 (510)
                      ||.+++ ..++  .+....+.+.+..++.......+...++++..+ .........+..+.+.+++++.++++++..+  
T Consensus       183 fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  258 (482)
T PTZ00404        183 FNEDIS-FDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTID--  258 (482)
T ss_pred             hccccc-cccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--
Confidence            999876 3221  122345555555555443332222222322211 1111223345566777777777766554321  


Q ss_pred             CCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC
Q 043989          279 GAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGM  358 (510)
Q Consensus       279 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  358 (510)
                           .....|+++.++++..+   ......+++++++..+++||+|||+++++|++|+|++||++|+|+++||+++++.
T Consensus       259 -----~~~~~dll~~ll~~~~~---~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~  330 (482)
T PTZ00404        259 -----PEVPRDLLDLLIKEYGT---NTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG  330 (482)
T ss_pred             -----CCCcccHHHHHHHHhcc---CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC
Confidence                 12357999999986432   1122345689999999999999999999999999999999999999999999987


Q ss_pred             CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCccc
Q 043989          359 ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTI-GGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERF  437 (510)
Q Consensus       359 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  437 (510)
                      +..++++++++||||+|||+||||++|+++..++|.+.+|+++ +|+.|||||.|.++.+++||||++||||++|+||||
T Consensus       331 ~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRw  410 (482)
T PTZ00404        331 RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRF  410 (482)
T ss_pred             CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcccc
Confidence            6678999999999999999999999999997668999999999 999999999999999999999999999999999999


Q ss_pred             ccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecC
Q 043989          438 LNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKK  507 (510)
Q Consensus       438 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  507 (510)
                      ++..       .+..++|||+|+|.|||++||++|+++++++++++|+++..++.+++....++++++|.
T Consensus       411 l~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  473 (482)
T PTZ00404        411 LNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLKPN  473 (482)
T ss_pred             CCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeecCC
Confidence            8531       34579999999999999999999999999999999999987776554445667777643


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.5e-76  Score=589.73  Aligned_cols=476  Identities=27%  Similarity=0.476  Sum_probs=364.2

Q ss_pred             HHHHHHhhcccCCCCCCCCCCCCCCCcccccccccC---CchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHH
Q 043989           28 AVIFFWWKTKRSSKACTPQPPGPRGLPLIGYLPFLG---NDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVR  104 (510)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~  104 (510)
                      ++++++....+..++..+.||||+++|++|++..+.   .+++..+.+++++||++|++++++.+.|+++||+++++++.
T Consensus        18 ~~~~~~~~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~   97 (519)
T PLN00168         18 LLLLLGKHGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALV   97 (519)
T ss_pred             HHHhhhhhhccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHH
Confidence            333334444445555667899999999999987653   34778899999999999999999999999999999999999


Q ss_pred             hCCCccccCCCcccceeeecCCCcccc-CCCChHHHHHHh-hhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCc
Q 043989          105 DKDMIFANRDAPIASLVSTYGGNDIAG-ADYGPNWRKLRK-IFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKP  181 (510)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~w~~~Rk-~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~  181 (510)
                      ++...|+.++........+. +.+++. ..+|+.|+++|| ++.+ .|+.+.++++.+.+.++++.+++.+.+. ..++.
T Consensus        98 ~~~~~f~~rp~~~~~~~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~-~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~  175 (519)
T PLN00168         98 ERGAALADRPAVASSRLLGE-SDNTITRSSYGPVWRLLRRNLVAE-TLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAA  175 (519)
T ss_pred             hcCCccccCCcccchhhhcc-CCCceeCCCCCHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            88777876655332222221 123332 356999999987 4555 9999999999999999999999999764 33456


Q ss_pred             cchHHHHHHHHHHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHhh-cCCCcccccccccccChhHHHHHHHHHHHHH
Q 043989          182 IDIGELSISTLINVIQNMLWGGVLELGERGTNVVAELKNKLAELMVLV-ATPNISDFFPVLSRFDIQRIERRTMKIFHWF  260 (510)
Q Consensus       182 vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l  260 (510)
                      +|+.+.+..++.++++.++||.+++ ...    ...+........... ....+..++|.+.+.......++..++.+.+
T Consensus       176 v~~~~~~~~~~~~ii~~~~fG~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~  250 (519)
T PLN00168        176 PRVVETFQYAMFCLLVLMCFGERLD-EPA----VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQ  250 (519)
T ss_pred             cCHHHHHHHHHHHHHHHHHcCCCcC-hhh----HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHH
Confidence            8999999999999999999998875 211    122323322222111 1222334456543322222234556678888


Q ss_pred             HHHHHHHHHHHHhhhcccCCCC--C---CCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHH
Q 043989          261 DNIVNCAIEQYRNKVSVKGAAG--D---TEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTM  335 (510)
Q Consensus       261 ~~~~~~~i~~~~~~~~~~~~~~--~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l  335 (510)
                      .+++..+++++++........+  .   .....|+++.|++....++.+..+++++++++++++++||+|||+++++|++
T Consensus       251 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l  330 (519)
T PLN00168        251 KELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIM  330 (519)
T ss_pred             HHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence            9999999988876432100000  0   1124689999998654322335699999999999999999999999999999


Q ss_pred             HHHhcChHHHHHHHHHHHHHhCC-CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEE
Q 043989          336 AELMQHPEVMKKVMKELAEVVGM-ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLL  414 (510)
Q Consensus       336 ~~L~~~p~~q~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~  414 (510)
                      ++|++||++|+++++||+++++. .+.++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|++
T Consensus       331 ~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~  410 (519)
T PLN00168        331 AELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNF  410 (519)
T ss_pred             HHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEE
Confidence            99999999999999999999975 35689999999999999999999999999888789999999999999999999999


Q ss_pred             ehhhhccCCCCCCCCCCCCCcccccCCCCC--cc-CCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCC
Q 043989          415 NVWAIHRDPQFWDNPLEFQPERFLNDARGF--DY-SGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTG  491 (510)
Q Consensus       415 ~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~--~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~  491 (510)
                      +.+++||||++|+||++|+||||++++...  +. ...+..++|||+|+|+|||++||++|+++++++|+++|+|++.++
T Consensus       411 ~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  490 (519)
T PLN00168        411 MVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPG  490 (519)
T ss_pred             ChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCC
Confidence            999999999999999999999999642211  11 122457999999999999999999999999999999999998776


Q ss_pred             CCCCCCcccceEeecCCCC
Q 043989          492 TKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~  510 (510)
                      ..++....++++..+++|+
T Consensus       491 ~~~~~~~~~~~~~~~~~~~  509 (519)
T PLN00168        491 DEVDFAEKREFTTVMAKPL  509 (519)
T ss_pred             CcCChhhhceeEEeecCCc
Confidence            5555444456666666553


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.6e-76  Score=586.93  Aligned_cols=454  Identities=35%  Similarity=0.578  Sum_probs=346.3

Q ss_pred             CCCCCCCCCCCCcccccccccCCc-hHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccce
Q 043989           42 ACTPQPPGPRGLPLIGYLPFLGND-LHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASL  120 (510)
Q Consensus        42 ~~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~  120 (510)
                      ++.+.||||+++|++|++..+..+ .+..+.+++++||++|++++++++.|+|+||+.+++++.++...+.+++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            446789999999999999877544 5688999999999999999999999999999999999987766666554332222


Q ss_pred             eeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc--CCCCccchHHHHHHHHHHHHHH
Q 043989          121 VSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN--NIGKPIDIGELSISTLINVIQN  198 (510)
Q Consensus       121 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~--~~~~~vdl~~~~~~~~~~~i~~  198 (510)
                      .....+.+.+++.+|+.|+++||.+...+|+.+.++.+.+.+.++++.+++.+...  ..++.+|+.++++.+++|+++.
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            22111234455667999999999987448999999999999999999999999754  1245689999999999999999


Q ss_pred             HHhccccccCCCcchHHHHHHHHHHHHHHhhcC--CCcccccccccccChhHHHHHHHHHHHHHHH-HHHHHHHHHHhhh
Q 043989          199 MLWGGVLELGERGTNVVAELKNKLAELMVLVAT--PNISDFFPVLSRFDIQRIERRTMKIFHWFDN-IVNCAIEQYRNKV  275 (510)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~~~~~~  275 (510)
                      ++||.+++ ..++ .....+.............  ..+...+|++.+.. ....+........... +.+..++++++..
T Consensus       187 ~~fG~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        187 MMFDRRFE-SEDD-PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHhCCCcc-cccc-hhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999887 4333 2233333333322222211  11223344433211 1111222222222222 3344566655432


Q ss_pred             cccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 043989          276 SVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEV  355 (510)
Q Consensus       276 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~  355 (510)
                      +..+  .+.+...|+++.|+++..+    +.++++++..++..+++||+|||+++++|++|+|++||++|++|++||+++
T Consensus       264 ~~~~--~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v  337 (503)
T PLN02394        264 SAKG--MDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTV  337 (503)
T ss_pred             hhcc--CCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            2110  0122357899999986542    358999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCc
Q 043989          356 VGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPE  435 (510)
Q Consensus       356 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  435 (510)
                      ++.++.++++++++||||+|||+||||++|+++...+|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||
T Consensus       338 ~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~Pe  417 (503)
T PLN02394        338 LGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPE  417 (503)
T ss_pred             hCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCcc
Confidence            98777789999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCC-CCCCCcccc-eEe
Q 043989          436 RFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGT-KLDLSEKFG-IVI  504 (510)
Q Consensus       436 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~-~~~  504 (510)
                      ||+++++.........+++|||+|+|+|+|++||.+|+++++++++++|++++.+|. .++..+.+| ..+
T Consensus       418 Rwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  488 (503)
T PLN02394        418 RFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSL  488 (503)
T ss_pred             ccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceee
Confidence            999653321112235679999999999999999999999999999999999988775 356555564 444


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.6e-76  Score=585.14  Aligned_cols=453  Identities=32%  Similarity=0.588  Sum_probs=353.8

Q ss_pred             CCCCCCCCCCCccccccccc-CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCccccee
Q 043989           43 CTPQPPGPRGLPLIGYLPFL-GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLV  121 (510)
Q Consensus        43 ~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~  121 (510)
                      ..+.||||+++|++|+++.+ ..+++..+.+++++||++|++++++.+.|+|+||+.+++++.++...|.+++.......
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~  106 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF  106 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence            34679999999999999887 44688899999999999999999999999999999999999987766765543322222


Q ss_pred             eecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHHHH
Q 043989          122 STYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQNML  200 (510)
Q Consensus       122 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~~~  200 (510)
                      ...+..++.+..+|+.|+++|+.+...+|+..++..+.+.+.++++++++.|.+. ..++.+|+.+++..+++|+++.++
T Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~  186 (502)
T PLN02966        107 ISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQA  186 (502)
T ss_pred             eccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHH
Confidence            2223333444556999999999944349999999999999999999999999764 445689999999999999999999


Q ss_pred             hccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccC-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 043989          201 WGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFD-IQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKG  279 (510)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  279 (510)
                      ||.+++ ..+.  ....+.+.+...........+..++|++..+. +....+......+.+.++++..++++.....   
T Consensus       187 fG~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---  260 (502)
T PLN02966        187 FGKKYN-EDGE--EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR---  260 (502)
T ss_pred             hCCccC-ccch--HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence            999886 3332  23445555555444333333333445432111 1111223334455666777777766543211   


Q ss_pred             CCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC
Q 043989          280 AAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGME  359 (510)
Q Consensus       280 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  359 (510)
                        . .....|+++.+++..+++.....++.+++.++++.+++||+|||+++++|++|+|++||++|+|+++||+++.+.+
T Consensus       261 --~-~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~  337 (502)
T PLN02966        261 --V-KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK  337 (502)
T ss_pred             --c-ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc
Confidence              0 1234689999997654322234689999999999999999999999999999999999999999999999998642


Q ss_pred             --CccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCcc
Q 043989          360 --TFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFW-DNPLEFQPER  436 (510)
Q Consensus       360 --~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R  436 (510)
                        +.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++++++||||++| |||++|+|||
T Consensus       338 ~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR  417 (502)
T PLN02966        338 GSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPER  417 (502)
T ss_pred             CCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhh
Confidence              3579999999999999999999999999987689999999999999999999999999999999999 9999999999


Q ss_pred             cccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCC---CCCCcccceEeec
Q 043989          437 FLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTK---LDLSEKFGIVIKK  506 (510)
Q Consensus       437 ~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~  506 (510)
                      |++++..  ....+..++|||+|+|+|+|++||.+|+++++++||++|+|++.++..   ++....+|++..+
T Consensus       418 wl~~~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~  488 (502)
T PLN02966        418 FLEKEVD--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHK  488 (502)
T ss_pred             hcCCCCC--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeecc
Confidence            9964321  122456799999999999999999999999999999999999887742   3334455666533


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.5e-76  Score=577.00  Aligned_cols=449  Identities=29%  Similarity=0.487  Sum_probs=355.5

Q ss_pred             CCCCCCCCCCCcccccccccC---CchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccc
Q 043989           43 CTPQPPGPRGLPLIGYLPFLG---NDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIAS  119 (510)
Q Consensus        43 ~~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~  119 (510)
                      ....+|||+++|++|++..+.   .....++.++..+||++|+.|++|.++++++||+.+++|+.++.....+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            445799999999999998873   35677888999999999999999999999999999999997655444444443312


Q ss_pred             eeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHH
Q 043989          120 LVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLINVIQNM  199 (510)
Q Consensus       120 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~~i~~~  199 (510)
                      ... +.|.|+++.. |+.|+++||++.+ .|+...++.+...+.++...++..+.....++.+|+.+.++++++|+|+.+
T Consensus       113 ~~~-~lG~gll~~~-g~~W~~~Rk~~~~-~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  113 LKP-WLGDGLLFSD-GEKWHKHRKLLTP-AFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHH-HhcCccccCC-chHHHHHHhhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            212 2345888777 9999999999998 999999999999999999888887766433444999999999999999999


Q ss_pred             HhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccc-cccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043989          200 LWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFP-VLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVK  278 (510)
Q Consensus       200 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  278 (510)
                      +||.... ..+. +....+.+++......+....   ..| +..++...+..++..++.+.++++++++|++|+++..+.
T Consensus       190 ~~G~~~~-~~~~-~~~~~~~~a~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~  264 (497)
T KOG0157|consen  190 AMGPESL-DAEG-PELFEYVQAFDDLTELISKRI---NLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKE  264 (497)
T ss_pred             hcCCccc-cccC-CcccHHHHHHHHHHHHHHHHH---cCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9992221 1111 233445555554444333211   123 222222222568889999999999999999999876532


Q ss_pred             CCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC
Q 043989          279 GAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGM  358 (510)
Q Consensus       279 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  358 (510)
                      .... .....|+++.+....     +..+++++|++++.+|++||+||||++++|++++|+.||++|+++++|++++++.
T Consensus       265 ~~~~-~~~~~d~L~~~~~~~-----~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~  338 (497)
T KOG0157|consen  265 GSGE-EKKRLDFLDTLLLEE-----DKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGN  338 (497)
T ss_pred             CCcc-cchhhhHHHHHHHhc-----cCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC
Confidence            2111 245678888633221     1579999999999999999999999999999999999999999999999999974


Q ss_pred             C-CccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeeeCCCCEEEEehhhhccCCCCCC-CCCCCCCc
Q 043989          359 E-TFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTI-GGYNIPKGTKLLLNVWAIHRDPQFWD-NPLEFQPE  435 (510)
Q Consensus       359 ~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~Ip~g~~v~~~~~~~~~d~~~~~-dp~~F~P~  435 (510)
                      . ..++....++|+||++||+||||||||+|.. .|++.+|+++ +||.||||+.|.++++++|||+.+|+ ||++||||
T Consensus       339 ~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~Pe  417 (497)
T KOG0157|consen  339 RDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPE  417 (497)
T ss_pred             CCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCcc
Confidence            3 3334444446999999999999999999988 5999999999 58999999999999999999999995 99999999


Q ss_pred             ccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCCC
Q 043989          436 RFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       436 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (510)
                      ||+++....  ..++.+|+|||+|||.|+|++||++|||+++++++++|+|++..+..  ....+.++++|++|+
T Consensus       418 Rf~~~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl  488 (497)
T KOG0157|consen  418 RFLDGEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGL  488 (497)
T ss_pred             ccCCCCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCe
Confidence            999643321  23467899999999999999999999999999999999999887754  456679999999875


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.8e-74  Score=567.54  Aligned_cols=446  Identities=28%  Similarity=0.485  Sum_probs=354.8

Q ss_pred             CCCCCCCcccccccccC-CchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceeeecC
Q 043989           47 PPGPRGLPLIGYLPFLG-NDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVSTYG  125 (510)
Q Consensus        47 ~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~  125 (510)
                      ||||+++|++|++..+. .+++..+.+++++||++|++++++++.++|+||+++++++.++...|+.++..........+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998875 45889999999999999999999999999999999999999877777766543222212111


Q ss_pred             CCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc---CCCCccchHHHHHHHHHHHHHHHHhc
Q 043989          126 GNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN---NIGKPIDIGELSISTLINVIQNMLWG  202 (510)
Q Consensus       126 ~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~---~~~~~vdl~~~~~~~~~~~i~~~~fG  202 (510)
                      +..+++.++|+.|+++|+.+.+.+++...++.+.+.+.+.++.+++.+.+.   ..++.||+.+++..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            223444456899999999887768888888888888888888888887643   24578999999999999999999999


Q ss_pred             cccccCCCcchH------HHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043989          203 GVLELGERGTNV------VAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVS  276 (510)
Q Consensus       203 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  276 (510)
                      .+++ .....+.      ...+...+...+.......+..++|.+++++.....+...+....+.++++.+++++++...
T Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVE-SVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccc-cccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            8876 3221111      12233333444433333333456676655544333344444445566788888887776532


Q ss_pred             ccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHh
Q 043989          277 VKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVV  356 (510)
Q Consensus       277 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  356 (510)
                      .      .....|+++.+++..      ..++++++.++++++++||+|||+++++|++++|++||++|+++++||+++.
T Consensus       240 ~------~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~  307 (466)
T PLN02655        240 R------GEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVC  307 (466)
T ss_pred             C------CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            1      123468999999754      2489999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcc
Q 043989          357 GMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPER  436 (510)
Q Consensus       357 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R  436 (510)
                      +.+. ++++++++||||+||++||||++|+++...+|++.+|++++|+.|||||.|+++.+++||||++|+||++|+|||
T Consensus       308 ~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR  386 (466)
T PLN02655        308 GDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPER  386 (466)
T ss_pred             CCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccc
Confidence            8644 899999999999999999999999999887899999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCCC
Q 043989          437 FLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       437 ~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (510)
                      |++++..   ......++|||+|+|.|||++||..|+++++++||++|++++.++.. +....+++++++++|+
T Consensus       387 ~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~  456 (466)
T PLN02655        387 FLGEKYE---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPL  456 (466)
T ss_pred             cCCCCcc---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCc
Confidence            9965321   11235799999999999999999999999999999999999877643 2345678888888774


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=9.2e-75  Score=578.14  Aligned_cols=444  Identities=23%  Similarity=0.366  Sum_probs=344.1

Q ss_pred             CCCCCCCCCCcccccccccCC-------------------chHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHH
Q 043989           44 TPQPPGPRGLPLIGYLPFLGN-------------------DLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVR  104 (510)
Q Consensus        44 ~~~~pgp~~~p~~G~~~~~~~-------------------~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~  104 (510)
                      .+.||||+++|++||+..+..                   .....+.+|.++||++|++++|+.+.|+++||+.+++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            347999999999999877632                   2223567899999999999999999999999999999998


Q ss_pred             hCCCccccCCCcccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-C-CCCcc
Q 043989          105 DKDMIFANRDAPIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-N-IGKPI  182 (510)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~-~~~~v  182 (510)
                      ++.. +..++...........+.++++. +|+.|+++||.+.+ .|+..+++.+.+.+.++++.+++.+.+. + +++.+
T Consensus       121 ~~~~-~~~r~~~~~~~~~~~~g~~l~~~-~g~~Wk~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        121 KYNT-VTGKSWLQQQGTKHFIGRGLLMA-NGADWYHQRHIAAP-AFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             cCCC-CCCCcchhhhHHHHHhcCCcccc-CchHHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            7643 43343221111111123565544 69999999999987 8999999999999999999999999764 2 23579


Q ss_pred             chHHHHHHHHHHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHH
Q 043989          183 DIGELSISTLINVIQNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDN  262 (510)
Q Consensus       183 dl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~  262 (510)
                      |+.+++..+++|++++++||.+++ ..+  +    +.+....+............+|++.+++ .+..++..+..+.+.+
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~-~~~--~----~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~  269 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYE-KGK--Q----IFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVER  269 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccc-cch--H----HHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHH
Confidence            999999999999999999998875 221  1    1122222211111111111234433332 2223455666788889


Q ss_pred             HHHHHHHHHHhhhcccCCCCCCCCcccHHHHHHhhcccC-CCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcC
Q 043989          263 IVNCAIEQYRNKVSVKGAAGDTEGKKDFLQFLLELQENE-DSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQH  341 (510)
Q Consensus       263 ~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~  341 (510)
                      ++.+.++++++......   ......|+++.+++...+. .++..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       270 ~~~~~i~~~~~~~~~~~---~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~  346 (516)
T PLN02290        270 LLMEIIQSRRDCVEIGR---SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASN  346 (516)
T ss_pred             HHHHHHHHHHHHhhccc---CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            99999988876543110   1123579999999864321 1233588999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhcc
Q 043989          342 PEVMKKVMKELAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHR  421 (510)
Q Consensus       342 p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~  421 (510)
                      |++|+|+++||+++++.+ .++++++++||||+|||+||||++|+++. ++|.+.+|++++|+.|||||.|.++.+++||
T Consensus       347 P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~r  424 (516)
T PLN02290        347 PTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHH  424 (516)
T ss_pred             HHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcC
Confidence            999999999999999854 78999999999999999999999999986 4899999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCccc
Q 043989          422 DPQFW-DNPLEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKF  500 (510)
Q Consensus       422 d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  500 (510)
                      ||++| +||++|+||||++++.     .....++|||.|+|.|+|++||++|+++++++|+++|++++.++...  ....
T Consensus       425 dp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~--~~~~  497 (516)
T PLN02290        425 SEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRH--APVV  497 (516)
T ss_pred             ChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCccc--Cccc
Confidence            99999 8999999999995321     12357999999999999999999999999999999999998776432  2233


Q ss_pred             ceEeecCCCC
Q 043989          501 GIVIKKKEPL  510 (510)
Q Consensus       501 ~~~~~~~~~~  510 (510)
                      +++++|++++
T Consensus       498 ~~~~~p~~~~  507 (516)
T PLN02290        498 VLTIKPKYGV  507 (516)
T ss_pred             eeeecCCCCC
Confidence            6777777653


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=6.8e-73  Score=560.25  Aligned_cols=461  Identities=25%  Similarity=0.427  Sum_probs=344.3

Q ss_pred             CCCCCCCCCCCCCcccccccccC-Cch-HHHHHHHHhhc-CCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcc
Q 043989           41 KACTPQPPGPRGLPLIGYLPFLG-NDL-HKSFTELAGVY-GPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPI  117 (510)
Q Consensus        41 ~~~~~~~pgp~~~p~~G~~~~~~-~~~-~~~~~~~~~ky-G~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~  117 (510)
                      +...+.||||+++|++|+++.+. ..+ ..++.++.++| |+||+++++++++|+|+||+.+++++.++...|+.++...
T Consensus        36 ~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~  115 (534)
T PLN03018         36 DRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLS  115 (534)
T ss_pred             CCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCch
Confidence            33345799999999999998863 222 23455666665 7999999999999999999999999998777787776543


Q ss_pred             cceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHH
Q 043989          118 ASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVI  196 (510)
Q Consensus       118 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i  196 (510)
                      .....+.++.++++..+|+.|+++|+.+.+.+++......+.+.+.++++.+++.+.+. ..++.+|+.+++.++++|++
T Consensus       116 ~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  195 (534)
T PLN03018        116 IMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVT  195 (534)
T ss_pred             hhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHH
Confidence            32222222234666666999999999999844555555555566667788999998753 34567999999999999999


Q ss_pred             HHHHhccccccCCC-----cchHHHHHHHHHHHHHHhh---cCCCcccccc-cccccChhHHHHHHHHHHHHHHHHHHHH
Q 043989          197 QNMLWGGVLELGER-----GTNVVAELKNKLAELMVLV---ATPNISDFFP-VLSRFDIQRIERRTMKIFHWFDNIVNCA  267 (510)
Q Consensus       197 ~~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~~~  267 (510)
                      ++++||.+++ ..+     +......+...........   ......+.+| +++++...+...+.......+.++++..
T Consensus       196 ~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (534)
T PLN03018        196 MRMLFGRRHV-TKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPI  274 (534)
T ss_pred             HHHHhCCccc-cccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHH
Confidence            9999999875 211     1111111222222222211   1111112233 3332222222344555567788888888


Q ss_pred             HHHHHhhhcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHH
Q 043989          268 IEQYRNKVSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKK  347 (510)
Q Consensus       268 i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~  347 (510)
                      ++++++.....   .......|+++.|++...+ +....++++++++++..+++||+|||+++++|++++|++||++|++
T Consensus       275 i~~~~~~~~~~---~~~~~~~d~l~~ll~~~~~-~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~k  350 (534)
T PLN03018        275 IDERVELWREK---GGKAAVEDWLDTFITLKDQ-NGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRK  350 (534)
T ss_pred             HHHHHHHhhhc---cCCCCcccHHHHHHHhhcc-cCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHH
Confidence            88887643210   1112346999999986532 1112489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCC
Q 043989          348 VMKELAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWD  427 (510)
Q Consensus       348 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~  427 (510)
                      +++||+++++.++.++.+++++||||+|||+||||++|+++...+|++.+|++++||.|||||.|+++.+++||||++|+
T Consensus       351 l~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~  430 (534)
T PLN03018        351 ALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWK  430 (534)
T ss_pred             HHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCC
Confidence            99999999987778899999999999999999999999999887799999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCCC---ccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCC-CCCCCcccceE
Q 043989          428 NPLEFQPERFLNDARGF---DYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGT-KLDLSEKFGIV  503 (510)
Q Consensus       428 dp~~F~P~R~l~~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~  503 (510)
                      ||++|+||||+++++..   .....+..++|||+|+|.|||++||.+|+++++++|+++|++++.++. +++.....+++
T Consensus       431 ~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  510 (534)
T PLN03018        431 DPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASL  510 (534)
T ss_pred             CccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccce
Confidence            99999999999643210   001234579999999999999999999999999999999999987663 44444444555


Q ss_pred             eec
Q 043989          504 IKK  506 (510)
Q Consensus       504 ~~~  506 (510)
                      ..|
T Consensus       511 ~~p  513 (534)
T PLN03018        511 LMA  513 (534)
T ss_pred             ecC
Confidence            543


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.4e-73  Score=563.82  Aligned_cols=421  Identities=21%  Similarity=0.324  Sum_probs=328.8

Q ss_pred             CCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCC
Q 043989           41 KACTPQPPGPRGLPLIGYLPFL-----GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDA  115 (510)
Q Consensus        41 ~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~  115 (510)
                      ++..+.||||+++|++|++..+     .+.++.++.++.++||++|+++++++++|+++||+++++++.++...|+.+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            4445689999999999997643     13567788999999999999999999999999999999999987666643322


Q ss_pred             cccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhh-hHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHH
Q 043989          116 PIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDD-CYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLIN  194 (510)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~  194 (510)
                      .....  ..++.++++. +|+.|+++|+.+.+ .|+...++. +.+.+.+.+..+++.+.   .++.+|+.+.++.+++|
T Consensus       114 ~~~~~--~~g~~~~~~~-~g~~wr~~Rk~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~vd~~~~~~~~~~~  186 (490)
T PLN02500        114 RSIGG--ILGKWSMLVL-VGDMHRDMRSISLN-FLSHARLRTHLLKEVERHTLLVLDSWK---ENSTFSAQDEAKKFTFN  186 (490)
T ss_pred             hHHHH--HhCccccccc-CCHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHhC---CCCCEEehHHHHHHHHH
Confidence            11111  1232345544 69999999999987 888888876 46777777777777764   34579999999999999


Q ss_pred             HHHHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043989          195 VIQNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNK  274 (510)
Q Consensus       195 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  274 (510)
                      ++++++||.+.+ ..+    ...+...+.........  ....+|...       .++..++.+.+.+++...++++++.
T Consensus       187 vi~~~~fg~~~~-~~~----~~~~~~~~~~~~~~~~~--~~~~~p~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~  252 (490)
T PLN02500        187 LMAKHIMSMDPG-EEE----TEQLKKEYVTFMKGVVS--APLNFPGTA-------YRKALKSRATILKFIERKMEERIEK  252 (490)
T ss_pred             HHHHHHhCCCCC-chH----HHHHHHHHHHHHhhhhc--chhcCCCcc-------cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998754 211    22333333333222111  001122211       2344556788888888888887765


Q ss_pred             hcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 043989          275 VSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAE  354 (510)
Q Consensus       275 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  354 (510)
                      ..+.   .......|+++.+++.       ..++++++++++..+++||+|||+++++|++++|++||++|+|+++||++
T Consensus       253 ~~~~---~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~  322 (490)
T PLN02500        253 LKEE---DESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLE  322 (490)
T ss_pred             hhcc---cCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence            4211   1112346999999973       24889999999999999999999999999999999999999999999999


Q ss_pred             HhC-----CCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCC
Q 043989          355 VVG-----METFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNP  429 (510)
Q Consensus       355 ~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp  429 (510)
                      +.+     .++.++++++++||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|+++.+++||||++|+||
T Consensus       323 v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP  401 (490)
T PLN02500        323 IARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQP  401 (490)
T ss_pred             HhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCc
Confidence            863     134689999999999999999999999999986 79999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCcc----CCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCC
Q 043989          430 LEFQPERFLNDARGFDY----SGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTK  493 (510)
Q Consensus       430 ~~F~P~R~l~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  493 (510)
                      ++|+||||++++.....    ...+..++|||+|+|.|+|++||.+|+++++++|+++|+|++.++..
T Consensus       402 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~  469 (490)
T PLN02500        402 QLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ  469 (490)
T ss_pred             cccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc
Confidence            99999999964322110    01346799999999999999999999999999999999999876643


No 18 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3.9e-74  Score=571.79  Aligned_cols=447  Identities=33%  Similarity=0.595  Sum_probs=364.1

Q ss_pred             CCCCCCCcccccccccC--CchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCccccee--e
Q 043989           47 PPGPRGLPLIGYLPFLG--NDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLV--S  122 (510)
Q Consensus        47 ~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~--~  122 (510)
                      ||||+++|++|+...+.  +++++++.+++++||+||+++++++++++|+||+.+++++..+...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999885  7889999999999999999999999999999999999999998766655433222211  1


Q ss_pred             ecCCCccccCCCChHHHHHHhhhhhhccCcc-hhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHHHH
Q 043989          123 TYGGNDIAGADYGPNWRKLRKIFVGKMMSNA-SLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQNML  200 (510)
Q Consensus       123 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~-~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~~~  200 (510)
                      ...+.++++.. ++.|+.+|+.+.+ .|+.. .+ ++.+.+.+.++.+++.+... ..++.+|+.++++.+++|++++++
T Consensus        81 ~~~~~~l~~~~-~~~~~~~R~~~~~-~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGLFFSD-GERWRRQRRLLAP-AFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSSTTSS-HHHHHHHHHHHHH-HHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccc-ccccccccccccc-cccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            23456666554 7999999999998 67666 66 89999999999999999876 223479999999999999999999


Q ss_pred             hccccccCCCcchHHHHHHHHHHHHHHhhcCC--CcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043989          201 WGGVLELGERGTNVVAELKNKLAELMVLVATP--NISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVK  278 (510)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  278 (510)
                      ||.+++ ..++ .....+.+.+..+...+...  .+...+|++.+++ ....+...++.+.+.++++..++++++.....
T Consensus       158 fG~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (463)
T PF00067_consen  158 FGKDFG-SLDD-EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDDG  234 (463)
T ss_dssp             HSSHHH-GTTH-HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS
T ss_pred             ccceee-eccc-ccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence            999876 3443 23345556666655443221  1233456554443 44566777788999999999999999887511


Q ss_pred             CCCCCCCCcccHHHHHHhhc-ccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhC
Q 043989          279 GAAGDTEGKKDFLQFLLELQ-ENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVG  357 (510)
Q Consensus       279 ~~~~~~~~~~d~l~~ll~~~-~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  357 (510)
                           .....|+++.++... +. +....++.+++.++++.+++||+|||+.+++|++++|++||++|+++++||+++.+
T Consensus       235 -----~~~~~d~l~~ll~~~~~~-~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  308 (463)
T PF00067_consen  235 -----DESRRDLLDSLLQASSDS-DGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG  308 (463)
T ss_dssp             -----SSSCSSHHHHHHHHHHTT-TTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT
T ss_pred             -----cccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                 246789999999986 22 11247999999999999999999999999999999999999999999999999998


Q ss_pred             CCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCccc
Q 043989          358 METFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERF  437 (510)
Q Consensus       358 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  437 (510)
                      +++.++.+++++||||+|||+||||++|+++..++|++.+|++++||.|||||.|+++.+++|+||++|+||++|+||||
T Consensus       309 ~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~  388 (463)
T PF00067_consen  309 DGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERF  388 (463)
T ss_dssp             TSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            77889999999999999999999999999996668999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCccc-ceEeecC
Q 043989          438 LNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKF-GIVIKKK  507 (510)
Q Consensus       438 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~  507 (510)
                      ++++.  .....+..++|||+|+|.|||++||++|++++++++|++||+++.++...+..... +++.+|+
T Consensus       389 ~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  457 (463)
T PF00067_consen  389 LDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPK  457 (463)
T ss_dssp             BTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEES
T ss_pred             ccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCC
Confidence            97643  11235678999999999999999999999999999999999999877555444443 4444443


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.4e-73  Score=519.51  Aligned_cols=449  Identities=24%  Similarity=0.384  Sum_probs=370.8

Q ss_pred             CCCCCCCCCCCccccccccc----CCchHHHHHHHHhhcCCeEEEE-cCCeeEEEECCHHHHHHHHHhCCCccccCC-Cc
Q 043989           43 CTPQPPGPRGLPLIGYLPFL----GNDLHKSFTELAGVYGPVYKLW-LGNKLFVVVSSPSLAKEVVRDKDMIFANRD-AP  116 (510)
Q Consensus        43 ~~~~~pgp~~~p~~G~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~-~~  116 (510)
                      +...+|||+++|++|.+..+    ..+.|+.+..++++||+||+.. +|+...|++.||++++.++++++. +..++ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            34578999999999988743    3578999999999999999999 788899999999999999999873 34442 11


Q ss_pred             ccc--eeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-C---CCCccchHHHHHH
Q 043989          117 IAS--LVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-N---IGKPIDIGELSIS  190 (510)
Q Consensus       117 ~~~--~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~---~~~~vdl~~~~~~  190 (510)
                      ..+  ....+++...++..+|++|.+.|..+++..+++++++.|.+.+.+.++++++.++.. +   +....|+.+.+.+
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence            111  111223333344556999999999999999999999999999999999999999876 3   2346799999999


Q ss_pred             HHHHHHHHHHhccccccCCC-cchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 043989          191 TLINVIQNMLWGGVLELGER-GTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIE  269 (510)
Q Consensus       191 ~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  269 (510)
                      ++++.||.++||.+++.-.+ ..+....+.+++.+++......   .+.|.++++..++.+++..++.+.+.++....|+
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id  283 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYID  283 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999994322 2356778888888887755432   2345555555677789999999999999999999


Q ss_pred             HHHhhhcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHH
Q 043989          270 QYRNKVSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVM  349 (510)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~  349 (510)
                      ...++.++....+  ....+.+..++..       +.++.+++..+++.+++||.||||.++.|+||+|++||++|++|+
T Consensus       284 ~~l~~l~~~~~~~--~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  284 NALEELEKQDSAG--SEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHHhccccc--cchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            9998876432211  1223344444432       236789999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCC
Q 043989          350 KELAEVVGM-ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDN  428 (510)
Q Consensus       350 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~d  428 (510)
                      +|+.++..+ ++.++.+++.+||||.||||||+||||++++. .|...+|.+++||.|||||.|.++.+..-+||++|++
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            999999987 68899999999999999999999999999998 5999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCC
Q 043989          429 PLEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKE  508 (510)
Q Consensus       429 p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  508 (510)
                      |++|+||||++++.   ...++..++|||.|+|+|+||+||++||.++|+.++++|+++..++.+++  ..+..+..|+.
T Consensus       434 p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~--~~~~~il~P~~  508 (519)
T KOG0159|consen  434 PEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVE--YVYRFILVPNR  508 (519)
T ss_pred             ccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCcc--ceeEEEEcCCC
Confidence            99999999997652   13467899999999999999999999999999999999999987765554  55666666666


Q ss_pred             CC
Q 043989          509 PL  510 (510)
Q Consensus       509 ~~  510 (510)
                      |+
T Consensus       509 ~l  510 (519)
T KOG0159|consen  509 PL  510 (519)
T ss_pred             Cc
Confidence            54


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.6e-72  Score=553.37  Aligned_cols=409  Identities=20%  Similarity=0.296  Sum_probs=328.0

Q ss_pred             CCCCCCCCCcccccccccCCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceeeec
Q 043989           45 PQPPGPRGLPLIGYLPFLGNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVSTY  124 (510)
Q Consensus        45 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~  124 (510)
                      +.||||+++|++|++..+.++...++.+++++||++|+++++++++++|+||+.+++++.++...+..+.......  .+
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~--~l  108 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD--IL  108 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH--Hh
Confidence            5788999999999988876667788999999999999999999999999999999999988766554332221111  12


Q ss_pred             CCCccccCCCChHHHHHHhhhhhhccCcchhhh-hHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc
Q 043989          125 GGNDIAGADYGPNWRKLRKIFVGKMMSNASLDD-CYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLINVIQNMLWGG  203 (510)
Q Consensus       125 ~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~  203 (510)
                      |+.+++. .+|+.|+++|+.+.+ .|++..++. +.+.+.+.++++++++.   .++.+|+.+.+..+++++++.++||.
T Consensus       109 g~~~~~~-~~g~~w~~~R~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~g~  183 (463)
T PLN02774        109 GTCNIAA-VHGSTHRYMRGSLLS-LISPTMIRDHLLPKIDEFMRSHLSGWD---GLKTIDIQEKTKEMALLSALKQIAGT  183 (463)
T ss_pred             Cccchhh-cCCHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhhC---CCCCEEeeHHHHHHHHHHHHHHHcCC
Confidence            3334544 469999999999987 899988875 68888888888888774   23579999999999999999999997


Q ss_pred             ccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 043989          204 VLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGAAGD  283 (510)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  283 (510)
                      +..      .....+.+.+..+.   ... +  .+|.  +++.. ..++..++.+.+.+++.+.++++++..        
T Consensus       184 ~~~------~~~~~~~~~~~~~~---~~~-~--~~~~--~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~--------  240 (463)
T PLN02774        184 LSK------PISEEFKTEFFKLV---LGT-L--SLPI--DLPGT-NYRSGVQARKNIVRMLRQLIQERRASG--------  240 (463)
T ss_pred             CCh------HHHHHHHHHHHHHh---ccc-c--cCCc--CCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence            543      11222332222221   110 0  1121  11111 124556678888888988888876431        


Q ss_pred             CCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC---CC
Q 043989          284 TEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGM---ET  360 (510)
Q Consensus       284 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~---~~  360 (510)
                       +..+|+++.+++...   .+..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+.   ++
T Consensus       241 -~~~~d~l~~ll~~~~---~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~  316 (463)
T PLN02774        241 -ETHTDMLGYLMRKEG---NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPED  316 (463)
T ss_pred             -CCcccHHHHHHhCcc---CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCC
Confidence             234699999997432   23358999999999999999999999999999999999999999999999999863   35


Q ss_pred             ccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccC
Q 043989          361 FVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFLND  440 (510)
Q Consensus       361 ~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  440 (510)
                      .++++++++||||+|||+|+||++|+++.. +|++.+|++++||.||||+.|+++++++||||++|+||++|+||||+++
T Consensus       317 ~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~  395 (463)
T PLN02774        317 PIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDK  395 (463)
T ss_pred             CCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCC
Confidence            688999999999999999999999999866 6999999999999999999999999999999999999999999999964


Q ss_pred             CCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCC
Q 043989          441 ARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTK  493 (510)
Q Consensus       441 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  493 (510)
                      +.    . ....++|||+|+|.|||++||.+|++++++.|+++|++++.++.+
T Consensus       396 ~~----~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~  443 (463)
T PLN02774        396 SL----E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK  443 (463)
T ss_pred             Cc----C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc
Confidence            31    1 123599999999999999999999999999999999999987754


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3e-72  Score=553.87  Aligned_cols=445  Identities=19%  Similarity=0.302  Sum_probs=333.3

Q ss_pred             CCCCCCCCcccccccccC---CchHHHHHHHHhhcCCeEE---EEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccc
Q 043989           46 QPPGPRGLPLIGYLPFLG---NDLHKSFTELAGVYGPVYK---LWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIAS  119 (510)
Q Consensus        46 ~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~---~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~  119 (510)
                      ..|||+++|++|++..+.   ....+++.++.++||..++   .|+++.++++|+||+.+++|+.++...+.++......
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            578899999999987662   2244555555566887665   5788999999999999999998876666554322111


Q ss_pred             eeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhh--HHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHH
Q 043989          120 LVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDC--YSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVI  196 (510)
Q Consensus       120 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~--~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i  196 (510)
                        ....|.+++++ +|+.|+++||.+.+ .|+...+...  .+.+.++++.+++.+.+. ..++.+|+.+.+.++++|+|
T Consensus       112 --~~~~g~gl~~~-~g~~Wr~~Rk~l~p-~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        112 --FDVLGEGILTV-DFELWEDLRKSNHA-LFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             --HHhhcCccccc-CcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence              12235677766 49999999999987 8888776542  366667778888888654 45678999999999999999


Q ss_pred             HHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCccccccccc----ccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043989          197 QNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLS----RFDIQRIERRTMKIFHWFDNIVNCAIEQYR  272 (510)
Q Consensus       197 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~----~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  272 (510)
                      ++++||.+.+ ..+.......+.............   ..+.|++.    .+...+..++..++.+.+.+++..+|++++
T Consensus       188 ~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        188 SILMTGYDPM-SLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HhheeCCCcc-ccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998775 322111112333333332221111   11123211    111122346677888999999999999887


Q ss_pred             hhhcccCCCCCCCCcccHHHHHHhhcccC-CCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHH
Q 043989          273 NKVSVKGAAGDTEGKKDFLQFLLELQENE-DSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKE  351 (510)
Q Consensus       273 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~E  351 (510)
                      +...+..  +.+...+|+++.+++...++ .....++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|
T Consensus       264 ~~~~~~~--~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        264 KEEISRA--ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHhhccc--cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            6532110  10122479999999864321 11234788999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCce-ecCeeeCCCCEEEEehhhhccCCCCC-CCC
Q 043989          352 LAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSST-IGGYNIPKGTKLLLNVWAIHRDPQFW-DNP  429 (510)
Q Consensus       352 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~-i~g~~Ip~g~~v~~~~~~~~~d~~~~-~dp  429 (510)
                      |++++      +++++++||||+||++||||++|+++... |.+.+|.+ ++|+.|||||.|++++|++||||++| +||
T Consensus       342 i~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP  414 (500)
T PLN02169        342 INTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDA  414 (500)
T ss_pred             HHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCCh
Confidence            99864      57899999999999999999999999885 77766655 49999999999999999999999999 899


Q ss_pred             CCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCC
Q 043989          430 LEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEP  509 (510)
Q Consensus       430 ~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  509 (510)
                      ++|+||||++++.... ...+.+|+|||+|+|+|+|++||++|+|+++++||++|++++.++.++  ....+++++|++|
T Consensus       415 ~~F~PeRfl~~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~g  491 (500)
T PLN02169        415 LDFKPERWISDNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKHG  491 (500)
T ss_pred             hhcCccccCCCCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCCC
Confidence            9999999996533211 123567999999999999999999999999999999999998766544  3455688888877


Q ss_pred             C
Q 043989          510 L  510 (510)
Q Consensus       510 ~  510 (510)
                      +
T Consensus       492 l  492 (500)
T PLN02169        492 L  492 (500)
T ss_pred             E
Confidence            4


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5.3e-71  Score=552.18  Aligned_cols=438  Identities=25%  Similarity=0.438  Sum_probs=330.7

Q ss_pred             cccccc-CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceeeecCCCccccCCCC
Q 043989           57 GYLPFL-GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVSTYGGNDIAGADYG  135 (510)
Q Consensus        57 G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  135 (510)
                      |++..+ ++.++..+.+++++||+||++++++.++++|+||+.+++|+..+...+.++....... . ..+.++++ .+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~-~-~~g~~l~~-~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILE-F-VMGKGLIP-ADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHh-h-ccCCceec-CCc
Confidence            443444 5667889999999999999999999999999999999999987765565543221111 1 12355554 469


Q ss_pred             hHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHHHHhccccccCCC-cch
Q 043989          136 PNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQNMLWGGVLELGER-GTN  213 (510)
Q Consensus       136 ~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~-~~~  213 (510)
                      +.|+.+|+.+.+ +|+...+..+.+.+.++++.+++++.+. ..++.+|+...+..+++|+|+.++||.+++ ... +.+
T Consensus       220 e~wr~rRr~l~p-~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~-~~~~~~~  297 (633)
T PLN02738        220 EIWRVRRRAIVP-ALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFD-SLSNDTG  297 (633)
T ss_pred             HHHHHHHHhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcc-ccccchH
Confidence            999999999998 8999999999999999999999999765 457789999999999999999999999887 332 212


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC----CCCCCCccc
Q 043989          214 VVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGA----AGDTEGKKD  289 (510)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~d  289 (510)
                      ....+.+.+...............+|.+..++  ...++..++.+.+.++...+++.+++..++...    ........|
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~d  375 (633)
T PLN02738        298 IVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPS  375 (633)
T ss_pred             HHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccch
Confidence            22233333322211111110001122222121  112344455566666666666654432221100    001123468


Q ss_pred             HHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCccchhhccC
Q 043989          290 FLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGMETFVEEFHLAK  369 (510)
Q Consensus       290 ~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~  369 (510)
                      +++.|++..      ..++++++.++++.+++||+|||+++++|++|+|++||++|+|||+||+++++ ++.++++++++
T Consensus       376 il~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~k  448 (633)
T PLN02738        376 ILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKK  448 (633)
T ss_pred             HHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHcc
Confidence            999999753      24889999999999999999999999999999999999999999999999998 46789999999


Q ss_pred             ChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCCCccCCC
Q 043989          370 LKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFLNDARGFDYSGN  449 (510)
Q Consensus       370 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~  449 (510)
                      ||||+|||+|+|||+|+++.. +|++.+|.+++||.|||||.|.++.+.+||||++||||++|+||||+.++........
T Consensus       449 LPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~  527 (633)
T PLN02738        449 LKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQ  527 (633)
T ss_pred             CHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCC
Confidence            999999999999999999986 5999999999999999999999999999999999999999999999843211111223


Q ss_pred             CceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCCC
Q 043989          450 NFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       450 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (510)
                      ...++|||.|+|.|+|++||++|++++++.|+++|+|++.++.+ +.....++++.|++++
T Consensus       528 ~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l  587 (633)
T PLN02738        528 NFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGL  587 (633)
T ss_pred             CCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCc
Confidence            45799999999999999999999999999999999999877642 2233345666666553


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.1e-71  Score=553.45  Aligned_cols=450  Identities=20%  Similarity=0.293  Sum_probs=330.9

Q ss_pred             CCCCCCCCcccccccccCCchHHHHHHHHhhc---CCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceee
Q 043989           46 QPPGPRGLPLIGYLPFLGNDLHKSFTELAGVY---GPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVS  122 (510)
Q Consensus        46 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~  122 (510)
                      .+|||+++|++|+++.+..+ +..+.++.++|   |++|++++++.+.++++||+.+++|+.++...+.+......... 
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~-  108 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME-  108 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH-
Confidence            37899999999998655333 23455666666   79999999999999999999999999876444543322111110 


Q ss_pred             ecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHH-HHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHHHH
Q 043989          123 TYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLR-KQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQNML  200 (510)
Q Consensus       123 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i-~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~~~  200 (510)
                      ...+.++++ .+|+.|+++||.+.+ .|+.++++.+.+.+ .+.++.+++.+.+. ..++.+|+.++++.+++|+++.++
T Consensus       109 ~~~g~~l~~-~~g~~w~~~Rr~l~~-~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        109 VLLGDGIFN-VDGELWRKQRKTASF-EFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             HHhcCeeec-cCcHHHHHHHHhcch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            112355554 569999999999988 89999999998876 56667777766543 345679999999999999999999


Q ss_pred             hccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 043989          201 WGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGA  280 (510)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  280 (510)
                      ||.+++ ..+.......+.+.++..........+ ..++.+.++......+...+..+.+.+++...++++++.......
T Consensus       187 fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  264 (516)
T PLN03195        187 FGVEIG-TLSPSLPENPFAQAFDTANIIVTLRFI-DPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARK  264 (516)
T ss_pred             hCCCcc-ccccCCCccHHHHHHHHHHHHHHHHHh-cchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            999887 332200011233333332221110000 001111111111122344566778888888888887765421100


Q ss_pred             CCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC--
Q 043989          281 AGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGM--  358 (510)
Q Consensus       281 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~--  358 (510)
                       .......|+++.+++...+  .+..+++++++++++.+++||+|||+++++|++|+|++||++|+|+++||+++.+.  
T Consensus       265 -~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  341 (516)
T PLN03195        265 -SGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERA  341 (516)
T ss_pred             -ccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccc
Confidence             0112357999999975432  23468999999999999999999999999999999999999999999999987642  


Q ss_pred             ------------------CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeeeCCCCEEEEehhhh
Q 043989          359 ------------------ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTI-GGYNIPKGTKLLLNVWAI  419 (510)
Q Consensus       359 ------------------~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~Ip~g~~v~~~~~~~  419 (510)
                                        ++.++++++++||||+|||+||||++|+++.. +|.+.+|..+ +|+.|||||.|.++.+++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~  420 (516)
T PLN03195        342 KEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSM  420 (516)
T ss_pred             ccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhh
Confidence                              24578999999999999999999999999988 4767777665 999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCc
Q 043989          420 HRDPQFW-DNPLEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSE  498 (510)
Q Consensus       420 ~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  498 (510)
                      ||||++| +||++|+||||++++..  ....+..++|||+|+|.|+|++||++|++++++.++++|++++.++.++.  .
T Consensus       421 h~dp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~  496 (516)
T PLN03195        421 GRMEYNWGPDAASFKPERWIKDGVF--QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVK--Y  496 (516)
T ss_pred             ccChhhhccChhhcCCcccCCCCCc--CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcce--e
Confidence            9999999 99999999999963210  11234579999999999999999999999999999999999987664332  3


Q ss_pred             ccceEeecCCC
Q 043989          499 KFGIVIKKKEP  509 (510)
Q Consensus       499 ~~~~~~~~~~~  509 (510)
                      ....+..|+.+
T Consensus       497 ~~~~~~~~~~~  507 (516)
T PLN03195        497 RMMTILSMANG  507 (516)
T ss_pred             eeeeEEecCCC
Confidence            33455666655


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4.1e-71  Score=542.84  Aligned_cols=419  Identities=22%  Similarity=0.300  Sum_probs=335.1

Q ss_pred             CCCCCCCCCCCCccccccccc-CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccce
Q 043989           42 ACTPQPPGPRGLPLIGYLPFL-GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASL  120 (510)
Q Consensus        42 ~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~  120 (510)
                      ...+.||||+++|++|+...+ .++++.++.+++++||++|+++++++++|+++||+.+++++.++...+.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            346789999999999998765 5688999999999999999999999999999999999999988766553  2211111


Q ss_pred             eeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHH
Q 043989          121 VSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLINVIQNML  200 (510)
Q Consensus       121 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~~i~~~~  200 (510)
                      ....|+.++++ .+|+.|+++||.+.+ .|++.+++.+.+.+.++++++++.|.    ++.+|+.++++.+++++++.++
T Consensus       110 ~~~~g~~~l~~-~~g~~w~~~Rk~l~~-~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~v~~~~~~~~~~~~v~~~~~  183 (463)
T PLN02196        110 ERMLGKQAIFF-HQGDYHAKLRKLVLR-AFMPDAIRNMVPDIESIAQESLNSWE----GTQINTYQEMKTYTFNVALLSI  183 (463)
T ss_pred             HHHcCcccccc-cCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHcCC----CCeEEeHHHHHHHHHHHHHHHH
Confidence            11223344544 469999999999998 89999999999999999999988773    3578999999999999999999


Q ss_pred             hccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 043989          201 WGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGA  280 (510)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  280 (510)
                      ||.+.. .     ....+.+....+...      ...+|+.  ++. ...++..++.+.+.+++.+.++++++..     
T Consensus       184 fG~~~~-~-----~~~~~~~~~~~~~~~------~~~~~~~--~p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----  243 (463)
T PLN02196        184 FGKDEV-L-----YREDLKRCYYILEKG------YNSMPIN--LPG-TLFHKSMKARKELAQILAKILSKRRQNG-----  243 (463)
T ss_pred             cCCCCc-h-----HHHHHHHHHHHHhcc------hhccccc--CCC-ccchHHHHHHHHHHHHHHHHHHHHhhcC-----
Confidence            997653 1     112222222111110      1112321  111 1124556777888888888888776532     


Q ss_pred             CCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC--
Q 043989          281 AGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGM--  358 (510)
Q Consensus       281 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~--  358 (510)
                          ....|+++.+++.      ...++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+.  
T Consensus       244 ----~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  313 (463)
T PLN02196        244 ----SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKE  313 (463)
T ss_pred             ----CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccc
Confidence                2346899999863      2358999999999999999999999999999999999999999999999998763  


Q ss_pred             -CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCccc
Q 043989          359 -ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERF  437 (510)
Q Consensus       359 -~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  437 (510)
                       ++.++++++++||||+|||+||||++|+++.. .|.+.+|++++||.|||||.|.++++++|+||++|+||++|+||||
T Consensus       314 ~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRf  392 (463)
T PLN02196        314 EGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRF  392 (463)
T ss_pred             cCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhh
Confidence             35688999999999999999999999999987 4999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCC
Q 043989          438 LNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEP  509 (510)
Q Consensus       438 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  509 (510)
                      +++.       .+..++|||+|+|.|+|++||++|++++++.|+++|++++.++. .+  ..+..+..|+.+
T Consensus       393 l~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~--~~~~~~~~p~~~  454 (463)
T PLN02196        393 EVAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NG--IQYGPFALPQNG  454 (463)
T ss_pred             cCCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cc--eEEcccccCCCC
Confidence            9531       34579999999999999999999999999999999999987652 22  234445556654


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=7e-70  Score=533.49  Aligned_cols=417  Identities=20%  Similarity=0.292  Sum_probs=327.2

Q ss_pred             CCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCC
Q 043989           41 KACTPQPPGPRGLPLIGYLPFL-----GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDA  115 (510)
Q Consensus        41 ~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~  115 (510)
                      +++.+.||||.++|++|+++.+     ..+++.++.++.++||+||++++++++.|+++||+++++++.++...++.+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4556689999999999998876     24688899999999999999999999999999999999999988766654422


Q ss_pred             cccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhh-hHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHH
Q 043989          116 PIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDD-CYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLIN  194 (510)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~  194 (510)
                      .....  .+|..+++ ..+|+.|+++|+.+.+ .|+...+.. ..+.+.+.+.++++.+.   .++.+|+.+.+..++++
T Consensus        83 ~~~~~--l~g~~~~~-~~~g~~wr~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  155 (452)
T PLN03141         83 KSLTE--LMGKSSIL-LINGSLQRRVHGLIGA-FLKSPHLKAQITRDMERYVSESLDSWR---DDPPVLVQDETKKIAFE  155 (452)
T ss_pred             hhHHH--HhCccccc-ccCcHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhcc---CCCCEEhHHHHHHHHHH
Confidence            11111  12333444 4469999999999987 777776665 35566666666666552   35679999999999999


Q ss_pred             HHHHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043989          195 VIQNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNK  274 (510)
Q Consensus       195 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  274 (510)
                      ++++++||.+.+ .     ....+.+.+..+......      +|.+  ++... ..+..++.+.+.+++...|+++++.
T Consensus       156 vi~~~~~G~~~~-~-----~~~~~~~~~~~~~~~~~~------~~~~--~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        156 VLVKALISLEPG-E-----EMEFLKKEFQEFIKGLMS------LPIK--LPGTR-LYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHHcCCCch-H-----HHHHHHHHHHHHhhhHHh------CccC--CCchH-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999997654 1     122333333333222111      1211  11111 2344567888999999999988765


Q ss_pred             hcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 043989          275 VSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAE  354 (510)
Q Consensus       275 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  354 (510)
                      ..... +.......|+++.+++..     +..+++++++++++.+++||+|||+++++|++++|++||++|+++++|+++
T Consensus       221 ~~~~~-~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~  294 (452)
T PLN03141        221 MKNKE-EDETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMK  294 (452)
T ss_pred             HhccC-ccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            43110 000012468999999753     235899999999999999999999999999999999999999999999998


Q ss_pred             HhC----CCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCC
Q 043989          355 VVG----METFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPL  430 (510)
Q Consensus       355 ~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~  430 (510)
                      +.+    .+..++.+++++||||+|||+|+||++|+++.+ +|.+.+|++++||.||||+.|+++.+++|+||++|+||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~  373 (452)
T PLN03141        295 LKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPY  373 (452)
T ss_pred             HHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCcc
Confidence            753    245688999999999999999999999999755 799999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCC
Q 043989          431 EFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGT  492 (510)
Q Consensus       431 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  492 (510)
                      +|+||||++++.      .+..|+|||+|+|.|+|++||.+|+++++++|+++|+++++++.
T Consensus       374 ~F~PeRfl~~~~------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~  429 (452)
T PLN03141        374 QFNPWRWQEKDM------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT  429 (452)
T ss_pred             ccCcccccCCCC------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC
Confidence            999999996421      34579999999999999999999999999999999999987663


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=4e-69  Score=526.53  Aligned_cols=443  Identities=20%  Similarity=0.291  Sum_probs=334.2

Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcccccccccC-----CchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHH
Q 043989           23 LVGMLAVIFFWWKTKRSSKACTPQPPGPRGLPLIGYLPFLG-----NDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPS   97 (510)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~   97 (510)
                      ++..++++++++.++.+ ..+.+.||||.++|++|++..+.     .++..++.++.++||++|+++++++++++|+||+
T Consensus         9 ~~~~~~~~~~~~~~~~~-~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe   87 (472)
T PLN02987          9 LLSSLAAIFFLLLRRTR-YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPE   87 (472)
T ss_pred             HHHHHHHHHHHHHHhhc-cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHH
Confidence            33344444444444433 33445799999999999987752     4578889999999999999999999999999999


Q ss_pred             HHHHHHHhCCCccccCCCcccceeeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHH-HHHHHHHHHHHHHHhc
Q 043989           98 LAKEVVRDKDMIFANRDAPIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYS-LRKQEFKNTIRDVYNN  176 (510)
Q Consensus        98 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~-~i~~~~~~ll~~l~~~  176 (510)
                      .+++++.++...|..+......  ..+|+.++++. +|+.|+++|+++.+ +++.+.+..+.. .+.+.++..++.|   
T Consensus        88 ~~~~il~~~~~~f~~~~~~~~~--~~lg~~~l~~~-~g~~wr~~R~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~---  160 (472)
T PLN02987         88 TNRFILQNEGKLFECSYPGSIS--NLLGKHSLLLM-KGNLHKKMHSLTMS-FANSSIIKDHLLLDIDRLIRFNLDSW---  160 (472)
T ss_pred             HHHHHHhCCCceEEecCcHHHH--HHhCccccccc-CcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHhh---
Confidence            9999999887777544321111  11244566655 59999999999765 555445544331 1223333333333   


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHH
Q 043989          177 NIGKPIDIGELSISTLINVIQNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKI  256 (510)
Q Consensus       177 ~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~  256 (510)
                        ++.+++.+.+.+++++++++++||.+.+ ..     ...+.+.+.......    ....+|++.     ...++..++
T Consensus       161 --~~~v~~~~~~~~~t~~vi~~~~fg~~~~-~~-----~~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~  223 (472)
T PLN02987        161 --SSRVLLMEEAKKITFELTVKQLMSFDPG-EW-----TESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQA  223 (472)
T ss_pred             --ccceehHHHHHHHHHHHHHHHHcCCCCh-HH-----HHHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHH
Confidence              1468999999999999999999997654 11     122222222221111    111234331     224567778


Q ss_pred             HHHHHHHHHHHHHHHHhhhcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 043989          257 FHWFDNIVNCAIEQYRNKVSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMA  336 (510)
Q Consensus       257 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~  336 (510)
                      .+.+.+++.++++++++...     ......+|+++.+++..      ..+++++++++++.+++||+|||+++++|+++
T Consensus       224 ~~~~~~~~~~~i~~r~~~~~-----~~~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~  292 (472)
T PLN02987        224 RTKVAEALTLVVMKRRKEEE-----EGAEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVK  292 (472)
T ss_pred             HHHHHHHHHHHHHHHHhhhh-----ccCcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence            88999999999998876542     11123579999999753      24899999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHHhC---CCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEE
Q 043989          337 ELMQHPEVMKKVMKELAEVVG---METFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLL  413 (510)
Q Consensus       337 ~L~~~p~~q~~l~~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~  413 (510)
                      +|++||++|+++++|++++.+   .+..++++++++|||++||++||||++|+++.. +|++.+|++++||.||||+.|+
T Consensus       293 ~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~  371 (472)
T PLN02987        293 FLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVF  371 (472)
T ss_pred             HHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEE
Confidence            999999999999999999875   235678899999999999999999999999865 6999999999999999999999


Q ss_pred             EehhhhccCCCCCCCCCCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCC
Q 043989          414 LNVWAIHRDPQFWDNPLEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTK  493 (510)
Q Consensus       414 ~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  493 (510)
                      ++.+.+|+||++|+||++|+||||+++...   ......++|||+|+|.|||++||.+|++++++.|+++|++++.++..
T Consensus       372 ~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~  448 (472)
T PLN02987        372 ASFRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK  448 (472)
T ss_pred             EehHHhhCCcccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc
Confidence            999999999999999999999999964321   11235799999999999999999999999999999999999877654


Q ss_pred             CCCCcccceEeecCCC
Q 043989          494 LDLSEKFGIVIKKKEP  509 (510)
Q Consensus       494 ~~~~~~~~~~~~~~~~  509 (510)
                      +..    ..+.+|+++
T Consensus       449 ~~~----~~~~~p~~~  460 (472)
T PLN02987        449 LVF----FPTTRTQKR  460 (472)
T ss_pred             eee----cccccCCCC
Confidence            321    335566554


No 27 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.4e-69  Score=532.42  Aligned_cols=446  Identities=23%  Similarity=0.376  Sum_probs=342.2

Q ss_pred             CCCCCCCCccccccccc-----CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccce
Q 043989           46 QPPGPRGLPLIGYLPFL-----GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASL  120 (510)
Q Consensus        46 ~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~  120 (510)
                      .-.|-.+||++|..+..     ++.++..+.+++++||++|++++++.+.++++||+++++|+++....|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34567889999988765     5678899999999999999999999999999999999999987655676554322111


Q ss_pred             eeecCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHH-HHHHHHHHHHHHHHhc-CCCCccchHHHHHHHHHHHHHH
Q 043989          121 VSTYGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYS-LRKQEFKNTIRDVYNN-NIGKPIDIGELSISTLINVIQN  198 (510)
Q Consensus       121 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~-~i~~~~~~ll~~l~~~-~~~~~vdl~~~~~~~~~~~i~~  198 (510)
                       . ..+.++++ .+|+.|+++||.+.+ .|+...++.+.+ .+.++++.+++.+.+. .+++.+|+.++++.+++|+++.
T Consensus        93 -~-~~~~~i~~-~~g~~wk~~Rk~l~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         93 -F-LFGSGFAI-AEGELWTARRRAVVP-SLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             -H-HhcCcccc-CCchHHHHHHHhhcC-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence             1 12355554 459999999999998 888888887655 6788899999999765 4567899999999999999999


Q ss_pred             HHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCccccccccccc---ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043989          199 MLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRF---DIQRIERRTMKIFHWFDNIVNCAIEQYRNKV  275 (510)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  275 (510)
                      ++||.+++ ..+..   ..+.+.+...+..... .....+|++...   ......++..++.+.+.+++...++++++..
T Consensus       169 ~~fG~~~~-~~~~~---~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~  243 (489)
T PLN02936        169 SVFNYNFD-SLTTD---SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIV  243 (489)
T ss_pred             HHcCCCcc-ccccC---cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999887 33221   1222222222221111 011123322100   0112235566778888888888888777644


Q ss_pred             cccCCC---CC--CCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHH
Q 043989          276 SVKGAA---GD--TEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMK  350 (510)
Q Consensus       276 ~~~~~~---~~--~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~  350 (510)
                      ++....   ..  .+...|+++.|++...      .++.++|.++++.+++||+|||+++++|++|+|++||++|+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        244 EAEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             hhcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            321110   00  1234789999997532      378999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCC
Q 043989          351 ELAEVVGMETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPL  430 (510)
Q Consensus       351 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~  430 (510)
                      ||+++++. ..++++++++||||+|||+||||++|+++...+|.+..|+.++|+.||+|+.|+++.+++||||++|+||+
T Consensus       318 Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  396 (489)
T PLN02936        318 ELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAE  396 (489)
T ss_pred             HHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCcc
Confidence            99999874 56789999999999999999999999999887676677788899999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCC
Q 043989          431 EFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEP  509 (510)
Q Consensus       431 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  509 (510)
                      +|+||||++++...........++|||+|+|.|||++||++|+++++++|+++|+++++++.++.  ...++++.|+++
T Consensus       397 ~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~  473 (489)
T PLN02936        397 EFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV--MTTGATIHTTNG  473 (489)
T ss_pred             ccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc--eecceEEeeCCC
Confidence            99999999643211112224579999999999999999999999999999999999988765442  233555656554


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.5e-68  Score=532.23  Aligned_cols=415  Identities=23%  Similarity=0.363  Sum_probs=328.6

Q ss_pred             CCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHhhcCC--eEEEEcCCeeEEEECCHHHHHHHHHhCCCccccC
Q 043989           41 KACTPQPPGPRGLPLIGYLPFL-----GNDLHKSFTELAGVYGP--VYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANR  113 (510)
Q Consensus        41 ~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~  113 (510)
                      ....+.||||+++|++|++..+     ..+++.++.+++++||+  +|++++++.+.++++||+.+++++.+++ .|.++
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccC
Confidence            3445689999999999998765     34688899999999997  7999999999999999999999998764 45433


Q ss_pred             CCcccceeeecCCCccccCCCChHHHHHHhhhhhhcc-CcchhhhhHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHH
Q 043989          114 DAPIASLVSTYGGNDIAGADYGPNWRKLRKIFVGKMM-SNASLDDCYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTL  192 (510)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~-~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~  192 (510)
                      .......  .+|...+. ..+|+.|+++|+.+.+ .| +++.++.+.+.+.+++.++++.+..   ++.+|+.++++.++
T Consensus       117 ~~~~~~~--~~g~~~~~-~~~g~~w~~~R~~~~~-~f~~~~~l~~~~~~i~~~v~~~~~~~~~---~~~v~~~~~~~~~~  189 (490)
T PLN02302        117 WPESTVE--LIGRKSFV-GITGEEHKRLRRLTAA-PVNGPEALSTYIPYIEENVKSCLEKWSK---MGEIEFLTELRKLT  189 (490)
T ss_pred             CchhHHH--Hhcccccc-ccCcHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCEehHHHHHHHH
Confidence            2221111  12333333 4469999999999998 66 5788999999999999999998853   24699999999999


Q ss_pred             HHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043989          193 INVIQNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYR  272 (510)
Q Consensus       193 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  272 (510)
                      ++++++++||.+.+ .     ....+...+.........  +...+|..       ..++..++.+.+.+++.+.+++++
T Consensus       190 ~~vi~~~~~G~~~~-~-----~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        190 FKIIMYIFLSSESE-L-----VMEALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHHcCCCCh-H-----HHHHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998754 1     112222222222111111  01111211       123444566778888888888887


Q ss_pred             hhhcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHH
Q 043989          273 NKVSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKEL  352 (510)
Q Consensus       273 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei  352 (510)
                      +....    +..+...|+++.++++..+  ++..+++++++++++.+++||+|||+++++|++++|++||++|+++++|+
T Consensus       255 ~~~~~----~~~~~~~d~l~~ll~~~~~--~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~  328 (490)
T PLN02302        255 NSRKQ----NISPRKKDMLDLLLDAEDE--NGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQ  328 (490)
T ss_pred             Hhhhc----cCCCCcCCHHHHHHhhhcc--CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            65321    1123457999999986543  23458999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCC----CccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCC
Q 043989          353 AEVVGME----TFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDN  428 (510)
Q Consensus       353 ~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~d  428 (510)
                      +++.+..    ..++++++++||||+|||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+|
T Consensus       329 ~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~d  407 (490)
T PLN02302        329 EEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPN  407 (490)
T ss_pred             HHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCC
Confidence            9998642    1378899999999999999999999999886 6999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCC
Q 043989          429 PLEFQPERFLNDARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTG  491 (510)
Q Consensus       429 p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~  491 (510)
                      |++|+||||++.+      ..+..++|||+|+|.|+|++||.+|+++++++++++|++++.++
T Consensus       408 P~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  464 (490)
T PLN02302        408 PKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP  464 (490)
T ss_pred             ccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence            9999999999532      23457999999999999999999999999999999999998754


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-68  Score=478.25  Aligned_cols=438  Identities=25%  Similarity=0.380  Sum_probs=346.3

Q ss_pred             CCCCCCCC-CcccccccccCCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceeee
Q 043989           45 PQPPGPRG-LPLIGYLPFLGNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVST  123 (510)
Q Consensus        45 ~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~  123 (510)
                      +.||--++ +|++|+...+++++.+++++.++|||+||++.++|+.+.++.||+....++.++...++............
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            35555444 79999999999999999999999999999999999999999999999999988754454333332333334


Q ss_pred             cCCCccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHH-HHhcCCCCccchHHHHHHHHHHHHHHHHhc
Q 043989          124 YGGNDIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRD-VYNNNIGKPIDIGELSISTLINVIQNMLWG  202 (510)
Q Consensus       124 ~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~-l~~~~~~~~vdl~~~~~~~~~~~i~~~~fG  202 (510)
                      | |.++....++....++.+.+.. .+....++++.+.|.+++.+.++. +.  ++|..-.+.+.+..+++.+.-.++||
T Consensus       111 F-g~~v~~d~~~~~~~e~~~~~k~-~L~~~~lk~~~e~m~~el~~~f~~~~~--~s~~~d~l~~~~~~ii~tAs~~ll~~  186 (486)
T KOG0684|consen  111 F-GKGVVYDVPNHVMMEQKKFFKS-ALGGVALKSLVELMLEELHAYFETSLG--ESGETDGLYTFCRLIIFTASRLLLGG  186 (486)
T ss_pred             c-CCCccccCCCchHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHhcccc--cccchhHhhhhhHHHhhhhHHHhhhh
Confidence            4 3566666667888888888877 888999999999999999988887 32  35566667888888888887777777


Q ss_pred             cccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 043989          203 GVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGAAG  282 (510)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  282 (510)
                      +... ..+.  ....+...++.-+.     .+...||.  +++... .++..++++.+.+.....+.++++..+      
T Consensus       187 e~r~-~~d~--~~a~l~~dLd~~F~-----~~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s------  249 (486)
T KOG0684|consen  187 EVRD-QLDA--DVAKLYHDLDQGFQ-----PFDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASIS------  249 (486)
T ss_pred             hhhh-hhcc--hHHHHHHHHhcccc-----chHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhccc------
Confidence            6554 3222  11222222222111     12233552  222222 345568889999999999998888652      


Q ss_pred             CCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCc-
Q 043989          283 DTEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGMETF-  361 (510)
Q Consensus       283 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~-  361 (510)
                        ...+|+++.+++...   ++...+++++....+.++|||..||+.+.+|++++|++|||+++.+++|+.+++|...+ 
T Consensus       250 --~~~~dmlq~l~~~y~---dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~  324 (486)
T KOG0684|consen  250 --KWDNDMLQSLMEKYK---DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEK  324 (486)
T ss_pred             --cccHHHHHHHHHHhh---cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCC
Confidence              355799999998332   35678999999999999999999999999999999999999999999999999987554 


Q ss_pred             cchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceecC----eeeCCCCEEEEehhhhccCCCCCCCCCCCCCccc
Q 043989          362 VEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGG----YNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERF  437 (510)
Q Consensus       362 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g----~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  437 (510)
                      ++++.+++||.|++||+|||||+||.+..+ |.+.+|.++.+    |.||+|.+|+++++.+|+||+||+||++|+|+||
T Consensus       325 l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf  403 (486)
T KOG0684|consen  325 LTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRF  403 (486)
T ss_pred             CCHHHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhc
Confidence            999999999999999999999999888775 99999999955    9999999999999999999999999999999999


Q ss_pred             ccCCCCCccCCCC--ceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCCC
Q 043989          438 LNDARGFDYSGNN--FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       438 l~~~~~~~~~~~~--~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (510)
                      ++++++....+..  ..|||||+|+|.|||++||.+|+|+++..+|++||+++.+|..++++.. .++++|+.++
T Consensus       404 ~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s-~~v~~P~g~v  477 (486)
T KOG0684|consen  404 LKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYS-RMVMQPEGDV  477 (486)
T ss_pred             cCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHH-HhhcCCCCCc
Confidence            9765433222222  3469999999999999999999999999999999999999833333333 5588888774


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.6e-67  Score=517.84  Aligned_cols=432  Identities=18%  Similarity=0.227  Sum_probs=326.8

Q ss_pred             CcccccccccCCchHHHHHHHHhhcC-CeEEEEcCCeeEEEECCHHHHHHHHHhCCCccccCCCcccceeeecCCCcccc
Q 043989           53 LPLIGYLPFLGNDLHKSFTELAGVYG-PVYKLWLGNKLFVVVSSPSLAKEVVRDKDMIFANRDAPIASLVSTYGGNDIAG  131 (510)
Q Consensus        53 ~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (510)
                      .++.|++.....+..+++..+.++++ .+++++..+.  ++++||+.+++++..+...|.+......... ...|.++++
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~-~~~g~gi~~  125 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILG-DLLGRGIFN  125 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHH-HhcCCceee
Confidence            55788877655566777777888887 5788876564  8999999999999877555654432211111 112467665


Q ss_pred             CCCChHHHHHHhhhhhhccCcchhhhhH--HHHHHHHHHHHHHHHhc---CCCCccchHHHHHHHHHHHHHHHHhccccc
Q 043989          132 ADYGPNWRKLRKIFVGKMMSNASLDDCY--SLRKQEFKNTIRDVYNN---NIGKPIDIGELSISTLINVIQNMLWGGVLE  206 (510)
Q Consensus       132 ~~~g~~w~~~Rk~~~~~~~~~~~l~~~~--~~i~~~~~~ll~~l~~~---~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~  206 (510)
                      . +|+.|+++||.+.+ .|+.+.++.+.  +.+.+..+.+++.+.+.   +.+..+|+.++++++++|+|+.++||.+++
T Consensus       126 ~-~g~~wk~~Rk~l~~-~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        126 V-DGDSWRFQRKMASL-ELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             c-CcHHHHHHHHHhHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            4 59999999999987 89888888764  56677777888877653   224679999999999999999999999886


Q ss_pred             cCCCcchHHHHHHHHHHHHHHhhcCCCccccccccc---ccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 043989          207 LGERGTNVVAELKNKLAELMVLVATPNISDFFPVLS---RFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGAAGD  283 (510)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~---~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  283 (510)
                       ..+.......+.+.++......... ....+|+++   ++...+..++..++.+.+.+++.++|+++++..        
T Consensus       204 -~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~--------  273 (502)
T PLN02426        204 -CLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG--------  273 (502)
T ss_pred             -ccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence             3332111223444444333211100 001112211   111112345667788889999999999887642        


Q ss_pred             CCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC-Ccc
Q 043989          284 TEGKKDFLQFLLELQENEDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGME-TFV  362 (510)
Q Consensus       284 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-~~~  362 (510)
                      .....|+++.++++..        +++++.++++++++||+|||+++++|++|+|++||++|+++++||+++.+.+ ..+
T Consensus       274 ~~~~~dll~~ll~~~~--------~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~  345 (502)
T PLN02426        274 FSASKDLLSRFMASIN--------DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAA  345 (502)
T ss_pred             cCCcchHHHHHHhcCC--------CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCC
Confidence            1235799999997532        5789999999999999999999999999999999999999999999988753 368


Q ss_pred             chhhccCChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCcccccC
Q 043989          363 EEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTI-GGYNIPKGTKLLLNVWAIHRDPQFW-DNPLEFQPERFLND  440 (510)
Q Consensus       363 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~Ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~  440 (510)
                      +++++++||||+|||+||||++|+++.. .|.+.+|.++ +|+.||+||.|.++.+++||||++| +||++|+||||+++
T Consensus       346 t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~  424 (502)
T PLN02426        346 SFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKN  424 (502)
T ss_pred             CHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCC
Confidence            9999999999999999999999999987 4999998887 9999999999999999999999999 99999999999964


Q ss_pred             CCCCccCCCCceeeeccCCCCCCccHHHHHHHHHHHHHHHHHhcceecCCCCCCCCCcccceEeecCCCC
Q 043989          441 ARGFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWKLPTGTKLDLSEKFGIVIKKKEPL  510 (510)
Q Consensus       441 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (510)
                      +.  .....+..++|||+|+|.|+|++||.+|++++++.++++|++++.++.........+++++|++++
T Consensus       425 ~~--~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl  492 (502)
T PLN02426        425 GV--FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGL  492 (502)
T ss_pred             CC--cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCE
Confidence            21  112234579999999999999999999999999999999999986542212123346788887764


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=6.9e-60  Score=457.56  Aligned_cols=402  Identities=16%  Similarity=0.202  Sum_probs=295.2

Q ss_pred             CCCCCCCCCCCCccccccccc-----CCchHHHHHHHHhhcCC-eEEEEcCCeeE-------EEECCHHHHHHHHHh---
Q 043989           42 ACTPQPPGPRGLPLIGYLPFL-----GNDLHKSFTELAGVYGP-VYKLWLGNKLF-------VVVSSPSLAKEVVRD---  105 (510)
Q Consensus        42 ~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~i~dp~~v~~i~~~---  105 (510)
                      .+.+.|||+.+||++|+++.+     ..++..++.+.++|||+ ||++.++|.++       |+++||+.++.++.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            444569999999999999854     44568999999999999 99999998666       999999999999985   


Q ss_pred             -CCCccccCCCcccceeeecCCC--ccccCCCChHHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhc-CCCCc
Q 043989          106 -KDMIFANRDAPIASLVSTYGGN--DIAGADYGPNWRKLRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNN-NIGKP  181 (510)
Q Consensus       106 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~  181 (510)
                       ++..+..... ... . .+|+.  ..+...+|+.|+++|+++.+ .|+ ..++.+.+.|.+.++++++.|... ..+.+
T Consensus        94 ~~~~~~~~~~~-~~~-~-l~G~~~~~s~~~~~g~~H~r~Rrll~~-~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~  168 (480)
T PLN02648         94 DKRDVFTGTYM-PST-A-FTGGYRVLSYLDPSEPKHAKLKSFLFE-LLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGK  168 (480)
T ss_pred             cccccceeeec-cCc-c-ccCCceeeeecCCCCchHHHHHHHHHH-HHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCC
Confidence             4433433222 111 1 33444  13345569999999999998 888 477889999999999999999653 34557


Q ss_pred             cchHHHHHHHHHHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHhhcCCCcccccccccccChhHHHHH---------
Q 043989          182 IDIGELSISTLINVIQNMLWGGVLELGERGTNVVAELKNKLAELMVLVATPNISDFFPVLSRFDIQRIERR---------  252 (510)
Q Consensus       182 vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~---------  252 (510)
                      +|+.+.++.+++|++++++||.+.+ ..   .....+......+....       .+|..... .....++         
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~-~~---~l~~~~~~~~~~~~~~~-------~~p~~~~~-l~~~~~~~i~~~~~~~  236 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPS-ET---ALGSDGPALIQKWLALQ-------LAPLASTG-LPHVLEELLLHTFPLP  236 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcc-hh---hhccchhHHHHHHHHHH-------hhHHHHcC-chHHHHHHhhcccCCc
Confidence            9999999999999999999998665 21   11111222222111100       01110000 0000000         


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCcccHHHHHHhhcccCCCCCCCcHHHHHHHHHH-HHHhcccchH
Q 043989          253 ---TMKIFHWFDNIVNCAIEQYRNKVSVKGAAGDTEGKKDFLQFLLELQENEDSASSISIIQIKALIQD-IITGGTDTTT  328 (510)
Q Consensus       253 ---~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~-~~~Ag~~tt~  328 (510)
                         ..+..+.+.++++                       +.++.+++...+    .++++++++++++. ..+++++|++
T Consensus       237 ~~~~~~~~~~~~~~~~-----------------------~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~  289 (480)
T PLN02648        237 FFLVKSDYDKLYDFFR-----------------------ASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFK  289 (480)
T ss_pred             hhhhhccHHHHHHHHH-----------------------HHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHH
Confidence               0000111111111                       112234433222    24899999999875 4466777888


Q ss_pred             HHHHHHHHHHhcChH-HHHHHHHHHHHHhCC-CCccchhhccCChhHHHHHHhhcCCCCCCCCCCccccccCceec----
Q 043989          329 TMVEWTMAELMQHPE-VMKKVMKELAEVVGM-ETFVEEFHLAKLKYLDAVVKETLRLHPALPLLVPRSSIQSSTIG----  402 (510)
Q Consensus       329 ~~l~~~l~~L~~~p~-~q~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~----  402 (510)
                      ++++|++|+|++||+ +|+++++||+.+.+. +..++++++++||||+|||+||||++|+++... |++.+|++++    
T Consensus       290 ~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~  368 (480)
T PLN02648        290 IFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDA  368 (480)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCc
Confidence            899999999999995 999999999999863 457899999999999999999999999999875 8899999995    


Q ss_pred             CeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCCCccCCCCceeeec---------cCCCCCCccHHHHHHHH
Q 043989          403 GYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFLNDARGFDYSGNNFQYLPF---------GSGRRMCAGIALAERML  473 (510)
Q Consensus       403 g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~~~  473 (510)
                      ||.||||+.|+++.+.+||||++|+||++|+|+||++++..     ....+++|         |+|+|.|+|++||++|+
T Consensus       369 g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~  443 (480)
T PLN02648        369 AFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVA  443 (480)
T ss_pred             eEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCccHHHHHHHH
Confidence            79999999999999999999999999999999999864321     11234444         67789999999999999


Q ss_pred             HHHHHHHHHhcc-eecCCCCC
Q 043989          474 MFVLASLLHSFE-WKLPTGTK  493 (510)
Q Consensus       474 ~~~l~~ll~~f~-~~~~~~~~  493 (510)
                      ++++++|+++|+ +++.+|..
T Consensus       444 ~~~la~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        444 RLFVAELFLRYDSFEIEVDTS  464 (480)
T ss_pred             HHHHHHHHHHhCEEeecCCcc
Confidence            999999999998 99887743


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=7.3e-54  Score=411.06  Aligned_cols=359  Identities=29%  Similarity=0.421  Sum_probs=289.9

Q ss_pred             hHHHHHHHHhhcCCeEEEEcCCee--EEEECCHHHHHHHHHhCCCccccCCCcccc---eeeecCCCccccCCCChHHHH
Q 043989           66 LHKSFTELAGVYGPVYKLWLGNKL--FVVVSSPSLAKEVVRDKDMIFANRDAPIAS---LVSTYGGNDIAGADYGPNWRK  140 (510)
Q Consensus        66 ~~~~~~~~~~kyG~v~~~~~~~~~--~v~i~dp~~v~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~w~~  140 (510)
                      .......+.+.||.++..+..+..  .+++++++++++++.++. .+++.......   ....+ +.+.+...+|+.|.+
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL-GDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc-cccceeecCCHHHHH
Confidence            344455677889988888766654  799999999999999874 12222111111   11222 233244556999999


Q ss_pred             HHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccccccCCCcchHHHHHHH
Q 043989          141 LRKIFVGKMMSNASLDDCYSLRKQEFKNTIRDVYNNNIGKPIDIGELSISTLINVIQNMLWGGVLELGERGTNVVAELKN  220 (510)
Q Consensus       141 ~Rk~~~~~~~~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  220 (510)
                      +||++++ .|+++.++.+.+.+.+.++++++.+ .. . ...++.+.+..+++++|+ .+||.+.+ +      ...+..
T Consensus       102 ~Rkl~~~-~F~~~~~~~~~~~i~~~~~~~~~~~-~~-~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~-~------~~~~~~  169 (411)
T COG2124         102 LRKLLAP-AFTPRALRGYRPLIREIADRLLDDL-WQ-G-GADLVLDFAAELTLRVIA-ELLGVPLE-D------RPQLLR  169 (411)
T ss_pred             HHHHhcc-ccCHHHHHHHHHHHHHHHHHHHHhc-cc-C-CchhHHHHhhhhhHHHHH-HHhCCCHH-H------HHHHHH
Confidence            9999998 9999999999999999999999999 32 3 678899999999999999 99998766 1      122222


Q ss_pred             HHHHHHHhhcCCCcccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCcccHHHHHHhhccc
Q 043989          221 KLAELMVLVATPNISDFFPVLSRFDIQRIERRTMKIFHWFDNIVNCAIEQYRNKVSVKGAAGDTEGKKDFLQFLLELQEN  300 (510)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~  300 (510)
                      ........   .     .|...   ......+..++.+.+.++++.+|++++..           ..+|+++.|+.+.++
T Consensus       170 ~~~~~~~~---~-----~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~-----------~~~dlls~l~~a~~~  227 (411)
T COG2124         170 WSDALLLR---L-----DPDLG---PEEPWRRARAARRELDAYLRALIAERRAA-----------PRDDLLSLLLSAEDD  227 (411)
T ss_pred             HHHHHHhc---c-----CcccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC-----------CcccHHHHHHHHhhC
Confidence            22222111   0     01111   11123567788899999999999998832           458999999998765


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCccchhhccCChhHHHHHHhh
Q 043989          301 EDSASSISIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVVGMETFVEEFHLAKLKYLDAVVKET  380 (510)
Q Consensus       301 ~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Et  380 (510)
                        ++..++++||.++++++++||||||+++++|++|.|++||++++++++|.+.                ||++++++|+
T Consensus       228 --~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~  289 (411)
T COG2124         228 --GGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEET  289 (411)
T ss_pred             --CCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHH
Confidence              2226999999999999999999999999999999999999999999998664                8999999999


Q ss_pred             cCCCCCCCCCCccccccCceecCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCCCccCCCCceeeeccCCC
Q 043989          381 LRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFLNDARGFDYSGNNFQYLPFGSGR  460 (510)
Q Consensus       381 lRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~  460 (510)
                      ||++||++. ++|.+.+|++++|+.||+|+.|+++++++||||++|+||++|||+||.            ..++|||+|+
T Consensus       290 LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~  356 (411)
T COG2124         290 LRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGP  356 (411)
T ss_pred             HHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCC
Confidence            999999999 579999999999999999999999999999999999999999999997            3599999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHhcceecCCC
Q 043989          461 RMCAGIALAERMLMFVLASLLHSFEWKLPTG  491 (510)
Q Consensus       461 r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~  491 (510)
                      |.|+|.+||.+|++++++.++++|++....+
T Consensus       357 H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         357 HRCLGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            9999999999999999999999999876665


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=62.53  E-value=25  Score=21.99  Aligned_cols=44  Identities=27%  Similarity=0.397  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHH
Q 043989          310 IQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELA  353 (510)
Q Consensus       310 ~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  353 (510)
                      -++..++..++=.|.|..+-.+.-.|...--||+....+-+|++
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            45666777777788888888888888888889999998888863


No 34 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=58.34  E-value=9  Score=29.84  Aligned_cols=22  Identities=18%  Similarity=0.372  Sum_probs=16.8

Q ss_pred             CCCccHHHHHHHHHHHHHHHHH
Q 043989          461 RMCAGIALAERMLMFVLASLLH  482 (510)
Q Consensus       461 r~C~G~~~A~~~~~~~l~~ll~  482 (510)
                      -.|.|+.||+.++-.++.+++.
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIt   39 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLIT   39 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHH
T ss_pred             ecccchHHHHHHHHHHHHHHhc
Confidence            4799999999999999999998


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=53.77  E-value=3.6  Score=34.99  Aligned_cols=43  Identities=30%  Similarity=0.302  Sum_probs=31.8

Q ss_pred             ChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEE
Q 043989          370 LKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLL  414 (510)
Q Consensus       370 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~  414 (510)
                      -..+.|||.|+.-+..-...-  =+..+|..++|..||+||.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            446789999998776554332  1257899999999999997644


No 36 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=53.27  E-value=12  Score=29.18  Aligned_cols=29  Identities=17%  Similarity=0.376  Sum_probs=18.5

Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHh
Q 043989            6 YHPCYEKDLNFTAIISALVGMLAVIFFWW   34 (510)
Q Consensus         6 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~   34 (510)
                      ..|+|.+...+.+|+.+++++++++++++
T Consensus        22 ~~psffsthm~tILiaIvVliiiiivli~   50 (189)
T PF05568_consen   22 TPPSFFSTHMYTILIAIVVLIIIIIVLIY   50 (189)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788877777777766665555444443


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=52.40  E-value=16  Score=25.27  Aligned_cols=40  Identities=15%  Similarity=0.181  Sum_probs=32.6

Q ss_pred             HHHhhcCCCCCCCCCCccccccCcee--cCeeeCCCCEEEEe
Q 043989          376 VVKETLRLHPALPLLVPRSSIQSSTI--GGYNIPKGTKLLLN  415 (510)
Q Consensus       376 ~i~EtlRl~p~~~~~~~R~~~~~~~i--~g~~Ip~g~~v~~~  415 (510)
                      -++|.+.+.+-+..-.-|.+.++..+  +|..|..|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            47899999998877777777776554  99999999999875


No 38 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=43.75  E-value=22  Score=23.12  Aligned_cols=24  Identities=33%  Similarity=0.576  Sum_probs=18.5

Q ss_pred             HHHHHhcChHHHHHHHHHHHHHhC
Q 043989          334 TMAELMQHPEVMKKVMKELAEVVG  357 (510)
Q Consensus       334 ~l~~L~~~p~~q~~l~~Ei~~~~~  357 (510)
                      .+.||.+||++.+++.+.=.+.+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            567999999999999875444443


No 39 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=37.82  E-value=33  Score=26.58  Aligned_cols=24  Identities=8%  Similarity=0.246  Sum_probs=12.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccC
Q 043989           16 FTAIISALVGMLAVIFFWWKTKRS   39 (510)
Q Consensus        16 ~~~l~~~~~~~~~~~~~~~~~~~~   39 (510)
                      +..++.+++.+++++|++.+++++
T Consensus        71 ~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   71 FGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc
Confidence            555666655555555555545444


No 40 
>PF03597 CcoS:  Cytochrome oxidase maturation protein cbb3-type;  InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase. 
Probab=37.50  E-value=96  Score=19.12  Aligned_cols=27  Identities=22%  Similarity=0.475  Sum_probs=17.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCC
Q 043989           16 FTAIISALVGMLAVIFFWWKTKRSSKA   42 (510)
Q Consensus        16 ~~~l~~~~~~~~~~~~~~~~~~~~~~~   42 (510)
                      +...++++++++.+..++|..++.+..
T Consensus         5 ~lip~sl~l~~~~l~~f~Wavk~GQfd   31 (45)
T PF03597_consen    5 ILIPVSLILGLIALAAFLWAVKSGQFD   31 (45)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence            445556666677777777777665533


No 41 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=37.35  E-value=80  Score=20.08  Aligned_cols=26  Identities=27%  Similarity=0.461  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCC
Q 043989           16 FTAIISALVGMLAVIFFWWKTKRSSK   41 (510)
Q Consensus        16 ~~~l~~~~~~~~~~~~~~~~~~~~~~   41 (510)
                      +...++++++++.+..++|..++.+.
T Consensus         6 ~LIpiSl~l~~~~l~~f~Wavk~GQf   31 (51)
T TIGR00847         6 ILIPISLLLGGVGLVAFLWSLKSGQY   31 (51)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCC
Confidence            44555667777777777777776543


No 42 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=37.20  E-value=15  Score=23.34  Aligned_cols=11  Identities=45%  Similarity=0.957  Sum_probs=9.2

Q ss_pred             eeccCCCCCCc
Q 043989          454 LPFGSGRRMCA  464 (510)
Q Consensus       454 ~~Fg~G~r~C~  464 (510)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999984


No 43 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=33.95  E-value=1.2e+02  Score=20.52  Aligned_cols=26  Identities=12%  Similarity=0.246  Sum_probs=11.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHhhcccC
Q 043989           14 LNFTAIISALVGMLAVIFFWWKTKRS   39 (510)
Q Consensus        14 ~~~~~l~~~~~~~~~~~~~~~~~~~~   39 (510)
                      ++-.+++.+.+.++.++++-.+++.+
T Consensus         2 I~d~iLi~ICVaii~lIlY~iYnr~~   27 (68)
T PF05961_consen    2 IGDFILIIICVAIIGLILYGIYNRKK   27 (68)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            33344444444444444454444433


No 44 
>PHA03049 IMV membrane protein; Provisional
Probab=33.80  E-value=1.2e+02  Score=20.29  Aligned_cols=22  Identities=14%  Similarity=0.241  Sum_probs=9.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhccc
Q 043989           17 TAIISALVGMLAVIFFWWKTKR   38 (510)
Q Consensus        17 ~~l~~~~~~~~~~~~~~~~~~~   38 (510)
                      .+++.+.+.++.++++-.+++.
T Consensus         5 ~~l~iICVaIi~lIvYgiYnkk   26 (68)
T PHA03049          5 IILVIICVVIIGLIVYGIYNKK   26 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc
Confidence            3344444444444444444443


No 45 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=32.42  E-value=74  Score=22.67  Aligned_cols=6  Identities=50%  Similarity=0.766  Sum_probs=3.4

Q ss_pred             CCcccc
Q 043989           52 GLPLIG   57 (510)
Q Consensus        52 ~~p~~G   57 (510)
                      .-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            356666


No 46 
>PF11346 DUF3149:  Protein of unknown function (DUF3149);  InterPro: IPR021494  This bacterial family of proteins has no known function. 
Probab=32.25  E-value=60  Score=19.64  Aligned_cols=28  Identities=14%  Similarity=0.252  Sum_probs=20.5

Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHhhcc
Q 043989           10 YEKDLNFTAIISALVGMLAVIFFWWKTK   37 (510)
Q Consensus        10 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~   37 (510)
                      |+++.+.+.+++++..+....++.++..
T Consensus         7 F~s~vGL~Sl~vI~~~igm~~~~~~~F~   34 (42)
T PF11346_consen    7 FGSDVGLMSLIVIVFTIGMGVFFIRYFI   34 (42)
T ss_pred             hcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7788888888888877777776654433


No 47 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=30.54  E-value=1.3e+02  Score=23.53  Aligned_cols=43  Identities=21%  Similarity=0.411  Sum_probs=32.8

Q ss_pred             CCchHHHHHHHHhhcCCeEEEEcCCeeEEEECCHHHHHHHHHhCC
Q 043989           63 GNDLHKSFTELAGVYGPVYKLWLGNKLFVVVSSPSLAKEVVRDKD  107 (510)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~v~~i~~~~~  107 (510)
                      ..+....+.+|.++||.+-- . .+...+...|++.++++..++.
T Consensus        73 P~~v~~~i~~w~~~~g~v~l-~-~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   73 PQNVEQSIEDWARRYGRVRL-Y-KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             CHHHHHHHHHHHHhcCCEEE-e-cCeEEEEECCHHHHHHHHhChh
Confidence            35677889999999999733 2 2456777899999999987753


No 48 
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=29.51  E-value=1e+02  Score=16.71  Aligned_cols=23  Identities=4%  Similarity=-0.010  Sum_probs=11.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhcc
Q 043989           15 NFTAIISALVGMLAVIFFWWKTK   37 (510)
Q Consensus        15 ~~~~l~~~~~~~~~~~~~~~~~~   37 (510)
                      +|+.-++..+.+.++.++++...
T Consensus         2 ~~~~wls~a~a~~Lf~YLv~ALl   24 (29)
T PRK14740          2 TVLDWLSLALATGLFVYLLVALL   24 (29)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHh
Confidence            45555555555555555554433


No 49 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=29.17  E-value=2.2e+02  Score=20.44  Aligned_cols=49  Identities=14%  Similarity=0.097  Sum_probs=40.2

Q ss_pred             cHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHh
Q 043989          308 SIIQIKALIQDIITGGTDTTTTMVEWTMAELMQHPEVMKKVMKELAEVV  356 (510)
Q Consensus       308 ~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  356 (510)
                      ............++.=+..++....-.+.+-++||+..+++.+.+.+-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            3455556666778888999999999999999999999999998887654


No 50 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=29.12  E-value=1.1e+02  Score=21.99  Aligned_cols=21  Identities=24%  Similarity=0.479  Sum_probs=16.7

Q ss_pred             hHHHHHHHHHHHHHhCCCCcc
Q 043989          342 PEVMKKVMKELAEVVGMETFV  362 (510)
Q Consensus       342 p~~q~~l~~Ei~~~~~~~~~~  362 (510)
                      |++.+.+|+||.+++...-.+
T Consensus        36 pd~l~~Lr~eIl~VI~KYV~i   56 (88)
T COG0851          36 PDYLEQLRKEILEVISKYVQI   56 (88)
T ss_pred             cchHHHHHHHHHHHHHHHhee
Confidence            899999999999988654333


No 51 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=29.10  E-value=1.3e+02  Score=22.81  Aligned_cols=41  Identities=24%  Similarity=0.340  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCC----CCC-CCcccccccc
Q 043989           21 SALVGMLAVIFFWWKTKRSSKACTPQPP----GPR-GLPLIGYLPF   61 (510)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p----gp~-~~p~~G~~~~   61 (510)
                      +++++++++.++.|+..++..+.....+    ++. .-|+-||+-.
T Consensus         9 llLll~l~asl~~wr~~~rq~k~~~~~~~~~~~~~E~~p~YgNL~~   54 (107)
T PF15330_consen    9 LLLLLSLAASLLAWRMKQRQKKAGQYSERRSEQPTEDDPCYGNLEL   54 (107)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccccCCCCccccCCCCCCcccccccc
Confidence            3334444455556666666555443321    111 3566666443


No 52 
>COG3197 FixS Uncharacterized protein, possibly involved in nitrogen fixation [Inorganic ion transport and metabolism]
Probab=28.34  E-value=1.3e+02  Score=19.55  Aligned_cols=25  Identities=24%  Similarity=0.448  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCC
Q 043989           16 FTAIISALVGMLAVIFFWWKTKRSS   40 (510)
Q Consensus        16 ~~~l~~~~~~~~~~~~~~~~~~~~~   40 (510)
                      +..-++++++++.+..|+|..+..+
T Consensus         6 ~Lipvsi~l~~v~l~~flWavksgQ   30 (58)
T COG3197           6 ILIPVSILLGAVGLGAFLWAVKSGQ   30 (58)
T ss_pred             eHHHHHHHHHHHHHHHHHHhcccCC
Confidence            3445566677777777888777654


No 53 
>PF04688 Phage_holin:  Phage lysis protein, holin;  InterPro: IPR006479 This entry represents the Bacteriophage SP-beta, BhlB, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=28.31  E-value=1.2e+02  Score=18.91  Aligned_cols=32  Identities=22%  Similarity=0.585  Sum_probs=20.5

Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHhhcc
Q 043989            6 YHPCYEKDLNFTAIISALVGMLAVIFFWWKTK   37 (510)
Q Consensus         6 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   37 (510)
                      ++|.=.+.-.+..+++.++.++..++.||.+-
T Consensus         2 ~~plpi~e~~i~~~~s~v~t~~~~l~awwKNN   33 (47)
T PF04688_consen    2 KSPLPIDEEQINQLISAVFTIVTALYAWWKNN   33 (47)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            34444555567677777777777777777553


No 54 
>PRK09458 pspB phage shock protein B; Provisional
Probab=28.15  E-value=1.4e+02  Score=20.74  Aligned_cols=22  Identities=18%  Similarity=0.456  Sum_probs=12.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhccc
Q 043989           17 TAIISALVGMLAVIFFWWKTKR   38 (510)
Q Consensus        17 ~~l~~~~~~~~~~~~~~~~~~~   38 (510)
                      +.-+++++.+++.+++++..+.
T Consensus         7 ~~PliiF~ifVaPiWL~LHY~s   28 (75)
T PRK09458          7 AIPLTIFVLFVAPIWLWLHYRS   28 (75)
T ss_pred             HHhHHHHHHHHHHHHHHHhhcc
Confidence            3444555666666666665544


No 55 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.65  E-value=34  Score=29.32  Aligned_cols=20  Identities=40%  Similarity=0.943  Sum_probs=17.8

Q ss_pred             hhhccCCCCCCCCCCCCCcc
Q 043989          417 WAIHRDPQFWDNPLEFQPER  436 (510)
Q Consensus       417 ~~~~~d~~~~~dp~~F~P~R  436 (510)
                      +.-|.|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            45599999999999999988


No 56 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=26.09  E-value=15  Score=35.14  Aligned_cols=43  Identities=26%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             ChhHHHHHHhhcCCCCCCCCCCccccccCceecCeeeCCCCEEEE
Q 043989          370 LKYLDAVVKETLRLHPALPLLVPRSSIQSSTIGGYNIPKGTKLLL  414 (510)
Q Consensus       370 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~Ip~g~~v~~  414 (510)
                      -..+.|||.|+.-+.--...-  =+..+|+.++|..||+||.|.-
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEE
Confidence            456789999998777544322  1257899999999999997643


No 57 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=25.38  E-value=1.8e+02  Score=18.30  Aligned_cols=34  Identities=24%  Similarity=0.233  Sum_probs=23.7

Q ss_pred             HHHHhhcCCeEEEEcCC----eeEEEECCHHHHHHHHH
Q 043989           71 TELAGVYGPVYKLWLGN----KLFVVVSSPSLAKEVVR  104 (510)
Q Consensus        71 ~~~~~kyG~v~~~~~~~----~~~v~i~dp~~v~~i~~  104 (510)
                      .+..++||+|-++.+..    .-+|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            46778999998876533    34555689998888875


No 58 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.81  E-value=1.1e+02  Score=18.00  Aligned_cols=17  Identities=24%  Similarity=0.581  Sum_probs=11.3

Q ss_pred             HHHHHh-cChHHHHHHHH
Q 043989          334 TMAELM-QHPEVMKKVMK  350 (510)
Q Consensus       334 ~l~~L~-~~p~~q~~l~~  350 (510)
                      .+..++ +||++++.+++
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            333444 79999887764


No 59 
>PRK05933 type III secretion system protein; Validated
Probab=24.27  E-value=76  Score=29.17  Aligned_cols=44  Identities=20%  Similarity=0.240  Sum_probs=34.9

Q ss_pred             hHHHHHHhhcCCCCCCCCCCcccc-cc--CceecCeeeCCCCEEEEe
Q 043989          372 YLDAVVKETLRLHPALPLLVPRSS-IQ--SSTIGGYNIPKGTKLLLN  415 (510)
Q Consensus       372 ~l~a~i~EtlRl~p~~~~~~~R~~-~~--~~~i~g~~Ip~g~~v~~~  415 (510)
                      -...-|+|.|+|.+.+..-+-|.+ -+  |+.++|..|.+|..|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            357779999999998877665664 34  556699999999999886


No 60 
>PF14991 MLANA:  Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=23.37  E-value=27  Score=26.23  Aligned_cols=23  Identities=26%  Similarity=0.587  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHhhcccCCCC
Q 043989           20 ISALVGMLAVIFFWWKTKRSSKA   42 (510)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~   42 (510)
                      +++++++++++-.|+.++++..+
T Consensus        32 L~VILgiLLliGCWYckRRSGYk   54 (118)
T PF14991_consen   32 LIVILGILLLIGCWYCKRRSGYK   54 (118)
T ss_dssp             -----------------------
T ss_pred             HHHHHHHHHHHhheeeeecchhh
Confidence            44555566666667766654433


No 61 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=22.60  E-value=78  Score=17.69  Aligned_cols=16  Identities=31%  Similarity=0.814  Sum_probs=13.1

Q ss_pred             CCceeeeccCCCCCCc
Q 043989          449 NNFQYLPFGSGRRMCA  464 (510)
Q Consensus       449 ~~~~~~~Fg~G~r~C~  464 (510)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3457999999999994


No 62 
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=22.59  E-value=1.4e+02  Score=16.12  Aligned_cols=21  Identities=19%  Similarity=0.395  Sum_probs=10.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc
Q 043989           16 FTAIISALVGMLAVIFFWWKT   36 (510)
Q Consensus        16 ~~~l~~~~~~~~~~~~~~~~~   36 (510)
                      +..+...++.++++.++.+..
T Consensus         3 ~~vi~g~llv~lLl~YLvYAL   23 (29)
T PRK14750          3 FSIVCGALLVLLLLGYLVYAL   23 (29)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            344454555555555555543


No 63 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=22.03  E-value=1.4e+02  Score=27.64  Aligned_cols=70  Identities=20%  Similarity=0.287  Sum_probs=41.1

Q ss_pred             HHHHHHhhcCCCCCC---CCCCccccccCcee----cCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCCCc
Q 043989          373 LDAVVKETLRLHPAL---PLLVPRSSIQSSTI----GGYNIPKGTKLLLNVWAIHRDPQFWDNPLEFQPERFLNDARGFD  445 (510)
Q Consensus       373 l~a~i~EtlRl~p~~---~~~~~R~~~~~~~i----~g~~Ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~  445 (510)
                      -+.+++.|..+.||.   |+.+.-.++.|.++    =.-+|.+||.|.++                              
T Consensus       275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------  324 (361)
T COG1759         275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------  324 (361)
T ss_pred             HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------
Confidence            366788888888865   33322233444444    12467888877663                              


Q ss_pred             cCCCCceeeeccCCCCCCccHHHHHHHHHHHH
Q 043989          446 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVL  477 (510)
Q Consensus       446 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l  477 (510)
                        +++.+++-||  .=+..|+++|. |+|..+
T Consensus       325 --GspYs~l~~~--~pms~GrRIA~-EIk~A~  351 (361)
T COG1759         325 --GSPYSNLYWG--EPMSTGRRIAR-EIKEAI  351 (361)
T ss_pred             --CCcchhhhcC--CCcchhhHHHH-HHHHHH
Confidence              1223344444  33668999998 777654


No 64 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=21.96  E-value=1.3e+02  Score=21.94  Aligned_cols=28  Identities=25%  Similarity=0.376  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHHHh
Q 043989          329 TMVEWTMAELMQHPEVMKKVMKELAEVV  356 (510)
Q Consensus       329 ~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  356 (510)
                      .++.|.++-.-+.||..+.|++||+++-
T Consensus        54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   54 FTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            4455555555567999999999999874


No 65 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=21.15  E-value=93  Score=24.78  Aligned_cols=43  Identities=16%  Similarity=0.194  Sum_probs=35.1

Q ss_pred             HHHHHHhhcCCCCCCCCCCccccccCcee--cCeeeCCCCEEEEe
Q 043989          373 LDAVVKETLRLHPALPLLVPRSSIQSSTI--GGYNIPKGTKLLLN  415 (510)
Q Consensus       373 l~a~i~EtlRl~p~~~~~~~R~~~~~~~i--~g~~Ip~g~~v~~~  415 (510)
                      ...-++|-++|.+....-..+.+-+++.|  +|+.|-+|..|.+.
T Consensus        82 ~~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          82 TKMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            35568999999998877777878776665  99999999999874


No 66 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=20.16  E-value=1.2e+02  Score=24.82  Aligned_cols=41  Identities=27%  Similarity=0.337  Sum_probs=31.8

Q ss_pred             CCchHHHHHHHHhhcC-CeEEEEcCCe----eEEEECCHHHHHHHH
Q 043989           63 GNDLHKSFTELAGVYG-PVYKLWLGNK----LFVVVSSPSLAKEVV  103 (510)
Q Consensus        63 ~~~~~~~~~~~~~kyG-~v~~~~~~~~----~~v~i~dp~~v~~i~  103 (510)
                      ++...+..+++.+++| +|+++.++|.    --++++||-.+--+.
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGvla  198 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGVLA  198 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhhhh
Confidence            6678888999999999 8999987663    257889987665543


Done!