BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043990
(911 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
Length = 940
Score = 1414 bits (3661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/930 (76%), Positives = 781/930 (83%), Gaps = 44/930 (4%)
Query: 13 PSDSSDGYTIDREDADYNDDNDDGDDEASAADSAPSDEDRKSKNVDALVRGNLVVKRQSL 72
PSDSS+ Y +D E+ D +D + A +PSDE+ KSKNVDALVRGNLVVKRQSL
Sbjct: 24 PSDSSEDYALDEEEGDDDDVD------VVQAAQSPSDEELKSKNVDALVRGNLVVKRQSL 77
Query: 73 LPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRL 132
LPRVLSVTEGAA+CRKPFKPP SNGY +GN QL+RRL ARKRFVPWGSSRPVL+ ITNR+
Sbjct: 78 LPRVLSVTEGAAICRKPFKPPSSNGYKDGNQQLSRRLLARKRFVPWGSSRPVLLPITNRI 137
Query: 133 DLPRTVENNVI-EENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREG 191
++ E +V+ E+ TLPPG+DPLVLWQP+E + GN +PI VD LLV+FLRPHQREG
Sbjct: 138 NVSSPFEKDVVVEDTVTLPPGIDPLVLWQPDECDSTAGNFIPIIVDSLLVQFLRPHQREG 197
Query: 192 VQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTP 251
VQFMF+CVSGL +AA I+GCILADDMGLGKTLQSI LLYTLL QGFD KPMV+KAIIVTP
Sbjct: 198 VQFMFDCVSGLHSAANINGCILADDMGLGKTLQSITLLYTLLGQGFDDKPMVRKAIIVTP 257
Query: 252 TSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHS 311
TSLVSNWEAEIKKWVG V+LIALCE+TRDDVVSGIDSF +P S+LQVLIVSYETFRMHS
Sbjct: 258 TSLVSNWEAEIKKWVGESVKLIALCETTRDDVVSGIDSFANPRSNLQVLIVSYETFRMHS 317
Query: 312 SKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNF 352
SKFS ESCDLLICDEAHRLKNDQTLTNR NDLEEFFAMVNF
Sbjct: 318 SKFSHDESCDLLICDEAHRLKNDQTLTNRALAALSCKRRILLSGTPMQNDLEEFFAMVNF 377
Query: 353 TNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLS 412
TNPGILGDAAYFRRYYET IICGREPTATEEEKKLG ERS ELSAKVNQFILRRTNALLS
Sbjct: 378 TNPGILGDAAYFRRYYETPIICGREPTATEEEKKLGAERSGELSAKVNQFILRRTNALLS 437
Query: 413 NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPK 472
NHLPPKI+EVVCCKLTPLQSELYNHFIHSKNVKRAI+EETK+SKILAYITALKKLCNHPK
Sbjct: 438 NHLPPKIVEVVCCKLTPLQSELYNHFIHSKNVKRAITEETKKSKILAYITALKKLCNHPK 497
Query: 473 LIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR 532
LIYDTI+SG PGT+GFEDCIRFFPP MFSGRSG+W+GGDG+W+ELSGKMHVLARLL HLR
Sbjct: 498 LIYDTIRSGTPGTSGFEDCIRFFPPGMFSGRSGTWSGGDGSWIELSGKMHVLARLLAHLR 557
Query: 533 QRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVF 592
QRTDDRIVLVSNYTQTLDLFAQLCRERRYP+LRLDG TSI KRQKLVN FND SK+EFVF
Sbjct: 558 QRTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGATSIGKRQKLVNRFNDQSKDEFVF 617
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR+WRDGQKKRV+IYRFLSTGTIEE
Sbjct: 618 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRDGQKKRVYIYRFLSTGTIEE 677
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
KVYQRQMSKEGLQKVIQ EQ DS+ ++GNFLSTEDLRDLFTF+ D+RSEIHE M+C RC
Sbjct: 678 KVYQRQMSKEGLQKVIQHEQNDSTISEGNFLSTEDLRDLFTFYGDIRSEIHEKMNCDRCL 737
Query: 713 NYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLN 772
DDG ESI DE S ++ +SD+EV DIGGFA +AG LH+LKSSEKQ+GTPLEEDL
Sbjct: 738 FNDDGLESI--MDEDGSVSRRCKSDEEVFDIGGFAKIAGILHELKSSEKQVGTPLEEDLG 795
Query: 773 NWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPKMQATEGNKNPNNHI 832
+WGHHF+S SVPDAILQASAGDEVTFVFTNQVDGKLVPIES SPKM +GN+N ++
Sbjct: 796 SWGHHFHSTSVPDAILQASAGDEVTFVFTNQVDGKLVPIESTASPKMLEIKGNQNQHDGK 855
Query: 833 TNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLSASSQP------KSMRTSLKG---- 882
N R+ L QH KLL+ + + +S + +LSAS +P K RTSLKG
Sbjct: 856 ENM-----SRTSRLFQHQKLLQSISASRDSLEETLSASFKPLEGATVKRRRTSLKGTTDS 910
Query: 883 AIKPKLSFGNQLPLKRFSPDNVE-HDDDFE 911
+K +LS G QLP KR P NVE HDDDFE
Sbjct: 911 TLKSRLSSGTQLPFKRVFPYNVEQHDDDFE 940
>gi|359475198|ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 1400 bits (3624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/901 (77%), Positives = 760/901 (84%), Gaps = 35/901 (3%)
Query: 41 SAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDN 100
SA S SDE RKS+NVDAL+RGNLV++RQSLLPRVLSVT+GAAV RKPFKPP SNGY +
Sbjct: 39 SAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 98
Query: 101 GNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQ 160
NDQL RL ARKRFVPWGSSRP LV ITNR+++ E +V+EE+ +LP G+DPLVLW
Sbjct: 99 RNDQLVHRLWARKRFVPWGSSRPALVLITNRVNISSAAEKDVLEESVSLPAGIDPLVLWH 158
Query: 161 PEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLG 220
PEE + NL+PI VDPLLVRFLRPHQREGVQFMF+CVSGL + A I GCILADDMGLG
Sbjct: 159 PEESEEQADNLMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTANISGCILADDMGLG 218
Query: 221 KTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
KTLQSI LLYTLL QGFDGK MVKKAIIVTPTSLVSNWEAEIKKWVG RVQL+ALCESTR
Sbjct: 219 KTLQSITLLYTLLRQGFDGKAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTR 278
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
DDVV GIDSFT P S LQVLIVSYETFRMHSSKFS S SCDLLICDEAHRLKNDQTLTNR
Sbjct: 279 DDVVFGIDSFTSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNR 338
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDLEEFFAMVNFTNPGILGDA YFRRYYET IICGREPTA
Sbjct: 339 ALAALACKRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAA 398
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEEKKLG ERS+ELS+ VNQFILRRTNALLSNHLPPKI+EVVCC+L+PLQSELYNHFIHS
Sbjct: 399 EEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHFIHS 458
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
KNVK+ I+EE KQSKILAYITALKKLCNHPKLIYDT+KSGN GT+GFEDC+RFFPPEMFS
Sbjct: 459 KNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNQGTSGFEDCMRFFPPEMFS 518
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
GRSG+WTGG+G WVELSGKMHVLARLL HLRQ+TDDRIVLVSNYTQTLDLFAQLCRERRY
Sbjct: 519 GRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRY 578
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
PYLRLDGTTSI+KRQKLVN F+DP K+EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA
Sbjct: 579 PYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 638
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
NDKQAAARVWRDGQKKRV+IYRFLSTGTIEEKV+QRQMSKEGLQKVIQQEQ DS TQGN
Sbjct: 639 NDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLKTQGN 698
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQ-EV 740
FLSTEDLRDLF+FH++VRSEIHE M+C RCQNYD+ ES+ E D S N+ QS Q +
Sbjct: 699 FLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNYDERPESVREEDGFESKNEGCQSYQMDC 758
Query: 741 TDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
DIGGFAG+ GCLHKLK SEKQ+GT LEEDL +WGHHF+S SVPDAI QASAGDEVTFVF
Sbjct: 759 DDIGGFAGITGCLHKLKRSEKQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVF 818
Query: 801 TNQVDGKLVPIESKVSPKMQATEGNKNPNNHITNPKPKLDQRSKLLSQHHKLLKDVPSLE 860
TNQVDGKLVP+ESKV MQ E NKN ++ + KL Q+ LLS+H + V +
Sbjct: 819 TNQVDGKLVPVESKVRANMQGVEANKNQ----SDKRGKLLQKPTLLSKHQQSAPPVSNKG 874
Query: 861 NSAKFSLSASSQP------KSMRTSLKG----AIKPKLSFGNQLPLKRFSPDNVEHDDDF 910
+S S+SS+P KSMRTS KG +KPKLS G+QLPLKR SPD+V+HDDDF
Sbjct: 875 DSITSISSSSSKPFHLAGIKSMRTS-KGTPSVTLKPKLSIGSQLPLKRLSPDSVQHDDDF 933
Query: 911 E 911
E
Sbjct: 934 E 934
>gi|449445882|ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
gi|449497618|ref|XP_004160452.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 1361 bits (3522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/940 (74%), Positives = 773/940 (82%), Gaps = 41/940 (4%)
Query: 1 MEDDEEILSDSDPSDSSDGYTIDREDADYNDDNDDGDDEASAADSAPSDEDRKSKNVDAL 60
MED++EI+ SD SDSSD Y ID + D+ D ++E S++ S SDED KSKNVDAL
Sbjct: 1 MEDEDEIVPASDSSDSSDDY-IDINGEAFQDE--DDEEEQSSSLSPSSDEDLKSKNVDAL 57
Query: 61 VRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGS 120
+RGNLVV+RQSLLPRVLSV EGAAVCRKPFKPPCS+GYD N+QLARRL ARKRFVPWGS
Sbjct: 58 LRGNLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCSSGYDERNNQLARRLWARKRFVPWGS 117
Query: 121 SRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLL 180
+P I L LP+ EN+ +EE+ TLPPG+DPLVLWQPE+ + + NL ITVDPLL
Sbjct: 118 LKPASSVIATNLFLPKAAENDAVEESVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLL 177
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK 240
VRFLRPHQREGVQFMFECVSGL I GCILADDMGLGKTLQSI+LLYTLLCQGFDGK
Sbjct: 178 VRFLRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGK 237
Query: 241 PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
PMVKKAIIVTPTSLVSNWEAEIKKWVG RV LIALCES+R+DVVS IDSF P SSLQVL
Sbjct: 238 PMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVL 297
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I+SYETFRMHSSKFS SESCDLLICDEAHRLKNDQTLTNR N
Sbjct: 298 IISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQN 357
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DLEEFFAMVNFTNPGILGD ++FRRYYE IICGREP ATEEEKKLG +RS+ELS KVNQ
Sbjct: 358 DLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQ 417
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRTNALLSNHLPPKI+EV+CCKL+PLQ++LYNHF+ SKNVKRAI+EE KQ+KILAYI
Sbjct: 418 FILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQSKNVKRAITEELKQAKILAYI 477
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
TALKKLCNHPKLIYDTIKSG+PGT+G E CIRFFPPEMFSGRSG+WTGGDGAWVELSGKM
Sbjct: 478 TALKKLCNHPKLIYDTIKSGSPGTSGLESCIRFFPPEMFSGRSGAWTGGDGAWVELSGKM 537
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
HVLARLL HLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN
Sbjct: 538 HVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNR 597
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
FND SK+EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI
Sbjct: 598 FNDLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 657
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YRFLSTGTIEEKVYQRQMSKEGLQKVIQQE T++ TQ NFLS+EDLRDLF+FHD+VRSE
Sbjct: 658 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSE 717
Query: 702 IHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEK 761
IHE M+C+RCQN E + DE S N QSDQ +DIGGFA LAGCL KLK SE+
Sbjct: 718 IHEKMNCSRCQNCYGRPEDM---DENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQ 774
Query: 762 QLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPKMQA 821
Q+G+PLEEDL NWGHHF S +VPD ILQASAGDEVTFVF+NQVDGKLVP+ES SP+M+
Sbjct: 775 QVGSPLEEDLGNWGHHFDSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKD 834
Query: 822 TEGNKNPNNHITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLSASSQP------KS 875
EGN N + N + Q+ LLSQH K L+ + S E+ K +L +S K
Sbjct: 835 AEGNGNNSRLNQNSR----QKPFLLSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKP 890
Query: 876 MRTSLKGA----IKPKLSFGNQLPLKRFSPDNVEHDDDFE 911
+RTS++G+ +K K S GN LP KR S +V DDFE
Sbjct: 891 VRTSVEGSMHVTLKHKHSLGNYLPQKRMS--DVSECDDFE 928
>gi|147834946|emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
Length = 985
Score = 1285 bits (3324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/838 (75%), Positives = 689/838 (82%), Gaps = 59/838 (7%)
Query: 41 SAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDN 100
SA S SDE RKS+NVDAL+RGNLVV+RQSLLPRVLSVT+GAAV RKPFKPP SNGY +
Sbjct: 39 SAVKSPTSDEGRKSQNVDALLRGNLVVRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 98
Query: 101 GNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQ 160
NDQL RL ARKRFVPWGSSRP LV ITN +++ E +V+EE+ +LP G+DPLVLW
Sbjct: 99 RNDQLVHRLWARKRFVPWGSSRPALVLITNCVNISSAAEKDVLEESVSLPAGIDPLVLWH 158
Query: 161 PEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLG 220
PEE + NL+PI VDPLLVRFLRPHQREGVQFMF+CVSGL + I GCILADDMGLG
Sbjct: 159 PEESEEQADNLMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTVNISGCILADDMGLG 218
Query: 221 KTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
KTLQSI LLYTLL QGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG RVQL+ALCESTR
Sbjct: 219 KTLQSITLLYTLLHQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTR 278
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
DDVV GIDSFT P S LQVLIVSYETFRMHSSKFS S SCDLLICDEAHRLKNDQTLTNR
Sbjct: 279 DDVVFGIDSFTSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNR 338
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDLEEFFAMVNFTNPGILGDA YFRRYYET IICGREPTA
Sbjct: 339 ALAALACKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAA 398
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEEKKLG ERS+ELS+ VNQFILRRTNALLSNHLPPKI+EVVCC+L+PLQSELYNHFIHS
Sbjct: 399 EEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHFIHS 458
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
KNVK+ I+EE KQSKILAYITALKKLCNHPKLIYDT+KSGNPGT+GFEDC+RFFPPEMFS
Sbjct: 459 KNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNPGTSGFEDCMRFFPPEMFS 518
Query: 502 G-------RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
G RSG+WTGG+G WVELSGKMHVLARLL HLRQ+TDDRIVLVSNYTQTLDLFAQ
Sbjct: 519 GRLLFLCVRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQ 578
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
LCRERRYPYLRLDGTTSI+KRQKLVN FNDP K+EFVFLLSSKAGGCGLNLIGGNRLVLF
Sbjct: 579 LCRERRYPYLRLDGTTSINKRQKLVNRFNDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLF 638
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNPANDKQ V+QRQMSKEGLQKVIQQEQ D
Sbjct: 639 DPDWNPANDKQ----------------------------VFQRQMSKEGLQKVIQQEQKD 670
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKND 734
S TQGNFLSTEDLRDLF+FH++VRSEIHE M+C RCQNYD+ ES+ E D S N+
Sbjct: 671 SLKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNYDERPESVREEDGFKSKNEGC 730
Query: 735 QSDQ-EVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAG 793
QS Q + DIGGFAG+ GCLHKLK SEKQ+GTPLEEDL +WGHHF+S SVPDAI QASAG
Sbjct: 731 QSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTPLEEDLGSWGHHFFSTSVPDAIFQASAG 790
Query: 794 DEVTFVFTNQVDGKLVPIESKVSPKMQATEGNKNPNNHITNPKPKLDQRSKLLSQHHK 851
DEVTFVFTNQVDGKLVP+ESKV MQ E NKN ++ + KL Q+ LLS+H +
Sbjct: 791 DEVTFVFTNQVDGKLVPVESKVRANMQGVEANKNQ----SDKRGKLLQKPTLLSKHQQ 844
>gi|145338703|ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana]
gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana]
gi|332642687|gb|AEE76208.1| Rad54-like protein [Arabidopsis thaliana]
Length = 910
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/866 (74%), Positives = 721/866 (83%), Gaps = 30/866 (3%)
Query: 2 EDDEEILSDSDPSDSSDGYTIDREDADYNDDNDDGDDEASAADSAPSDEDRKSKNVDALV 61
E+DEEILS SD DSSD Y D +D++ +DN + +D A S SD DRKSKNV L+
Sbjct: 3 EEDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVV--SLSSDADRKSKNVKDLL 60
Query: 62 RGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSS 121
RGNLVV+RQ LLPRVLSV++GAAVCRKPFKPPCS+GYD+ QL+RRL ARKRFVPWGSS
Sbjct: 61 RGNLVVQRQPLLPRVLSVSDGAAVCRKPFKPPCSHGYDS-TGQLSRRLSARKRFVPWGSS 119
Query: 122 RPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDG-GNLVPITVDPLL 180
PV+V + +L+ +E + EE LPP ++PLVLWQ EE DG N+ I V +L
Sbjct: 120 TPVVVALPTKLEASTNIERDEEEEVVCLPPDIEPLVLWQSEE---DGMSNVTTIMVHSVL 176
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK 240
V+FLRPHQREGVQFMF+CVSGL +A I+GCILADDMGLGKTLQSI LLYTLLCQGFDG
Sbjct: 177 VKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGT 236
Query: 241 PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
PMVKKAIIVTPTSLVSNWEAEIKKWVG R+QLIALCESTRDDV+SGIDSFT P S+LQVL
Sbjct: 237 PMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVL 296
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I+SYETFRMHSSKF SESCDLLICDEAHRLKNDQTLTNR N
Sbjct: 297 IISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQN 356
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DLEEFFAMVNFTNPG LGDAA+FR YYE IICGREPTATEEEK L +RS+ELS+KVNQ
Sbjct: 357 DLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQ 416
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRTNALLSNHLPPKIIEVVCCK+T LQS LYNHFI SKN+KRA+++ KQ+K+LAYI
Sbjct: 417 FILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYI 476
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
TALKKLCNHPKLIYDTIKSGNPGT GFE+C+ FFP EMFSGRSG+WTGGDGAWVELSGKM
Sbjct: 477 TALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKM 536
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
HVL+RLL +LR++TDDRIVLVSNYTQTLDLFAQLCRERRYP+LRLDG+T+ISKRQKLVN
Sbjct: 537 HVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNR 596
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
NDP+K+EF FLLSSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAARVWRDGQKKRV++
Sbjct: 597 LNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYV 656
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YRFLSTGTIEEKVYQRQMSKEGLQKVIQ EQTD+S QGN LSTEDLRDLF+FH DVRSE
Sbjct: 657 YRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSE 716
Query: 702 IHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEK 761
IHE M C+RCQN G E+I EG+E N + Q DQE DIGGFA AGC + LK+SE+
Sbjct: 717 IHEKMSCSRCQNDASGTENIEEGNENNVDDNACQIDQE--DIGGFAKDAGCFNLLKNSER 774
Query: 762 QLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPK-MQ 820
Q+GTPLEEDL +WGHHF S SVPDAILQASAGDEVTFVFTNQVDGKLVPIES VSPK ++
Sbjct: 775 QVGTPLEEDLGSWGHHFTSKSVPDAILQASAGDEVTFVFTNQVDGKLVPIESNVSPKTVE 834
Query: 821 ATEGNKN-PNNHITNPKPKLDQRSKL 845
+ E N+N P N KP+ R L
Sbjct: 835 SEEHNRNQPVNKRAFNKPQQRPREPL 860
>gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
Length = 910
Score = 1258 bits (3256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/931 (70%), Positives = 741/931 (79%), Gaps = 46/931 (4%)
Query: 2 EDDEEILSDSDPSDSSDGYTIDREDADYNDDNDDGDDEASAADSAPSDEDRKSKNVDALV 61
E+DEEILS SD DSSD Y D +D++ ++N D +D A + S SD DRKSKNV+ L+
Sbjct: 3 EEDEEILSSSDCDDSSDSYKDDSQDSEGENENPDCEDLAVVSPS--SDADRKSKNVNDLL 60
Query: 62 RGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSS 121
RGNLVV+RQ LLPRVLSV+EGAAVCRKPFKPPCS+GY N +L+RRL ARKRFVPWGSS
Sbjct: 61 RGNLVVQRQPLLPRVLSVSEGAAVCRKPFKPPCSHGY-NSTGKLSRRLSARKRFVPWGSS 119
Query: 122 RPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDG-GNLVPITVDPLL 180
PV+V + +L+ +E + EE LPP ++PL+LWQ EE DG N+ I V LL
Sbjct: 120 TPVVVALPTKLEASTNIEKDEEEEVVCLPPDIEPLILWQSEE---DGMSNVTTIMVHSLL 176
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK 240
V+FLRPHQREGVQFMF+CVSGL + I+GCILADDMG GKTLQSI LLYTLLCQGFDG
Sbjct: 177 VQFLRPHQREGVQFMFDCVSGLHGSENINGCILADDMGFGKTLQSITLLYTLLCQGFDGT 236
Query: 241 PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
PMVKKAIIVTPTSLVSNWEAEIKKWVG R+QLIALCESTRDDV+SGIDSFT P S+LQVL
Sbjct: 237 PMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVL 296
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I+SYETFRMHSSKF SESCDLLICDEAHRLKNDQTLTNR N
Sbjct: 297 IISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQN 356
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DLEEFFAMVNFTNPG LGDAA+FR YYE IICGREPTATEEEK L +RS+ELS+KVNQ
Sbjct: 357 DLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQ 416
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRTNALLSNHLPPKIIEVVCCK+T LQS LYNHFI SKN+KRA+++ KQ+K+LAYI
Sbjct: 417 FILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYI 476
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
TALKKLCNHPKLIYDTIKSG+PGT GFE+C+ FFP EMFSGRSG+WTGGDGAWVELSGKM
Sbjct: 477 TALKKLCNHPKLIYDTIKSGSPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKM 536
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
HVL+RLL +LR++T+DRIVLVSNYTQTLDLFAQLCRERRYP+LRLDG+T+ISKRQKLVN
Sbjct: 537 HVLSRLLANLRRKTNDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNR 596
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
NDP+K+EF FLLSSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAARVWRDGQKKRV++
Sbjct: 597 LNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYV 656
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YRFLSTGTIEEKVYQRQMSKEGLQKVIQ EQTD++ QGN LSTEDLRDLF+FH DVRSE
Sbjct: 657 YRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNNTRQGNLLSTEDLRDLFSFHGDVRSE 716
Query: 702 IHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEK 761
IHE M C RCQN G E+I EG+E N + Q DQE DIGGFA AGC + LK+SEK
Sbjct: 717 IHEKMSCNRCQNDSAGTENIEEGNENNVDDNACQIDQE--DIGGFAKDAGCYNLLKNSEK 774
Query: 762 QLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPKM-Q 820
Q+GTPLEEDL +WGHHF S SVPDAILQAS GDEVTFVFTNQVDGKLVPIES VSPKM +
Sbjct: 775 QVGTPLEEDLGSWGHHFTSKSVPDAILQASTGDEVTFVFTNQVDGKLVPIESNVSPKMVE 834
Query: 821 ATEGNKNPN-NHITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLSASSQPKSMRTS 879
+ E N+N N KP+ QR + + L+ + E + + LS +
Sbjct: 835 SEEHNRNQTVNKRAFNKPQ--QRPR------EPLQPLSLNETTKRVKLSTYKRLHGTSNI 886
Query: 880 LKGAIKPKLSFGNQLPLKRFSPDNVEHDDDF 910
IK L NQ+ +V HDDDF
Sbjct: 887 DDAQIKMSLQRPNQV--------SVNHDDDF 909
>gi|356495839|ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
max]
Length = 894
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/893 (70%), Positives = 714/893 (79%), Gaps = 57/893 (6%)
Query: 50 EDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNG---NDQLA 106
E+RKS+NVDAL+RGNLVVKRQSLLPR+LSV++GAAVCRKPFKPPCS + + N L
Sbjct: 25 EERKSQNVDALLRGNLVVKRQSLLPRLLSVSQGAAVCRKPFKPPCSKSHASASAYNQDLT 84
Query: 107 RRLCARKRFVPWGSSRPVLVTIT------NRLDLPRTVENNVIEENFTLPPGVDPLVLWQ 160
R+L ARKRFVPWGSS P+ + I ++ ++ V + E +LPPG+DPLVLW
Sbjct: 85 RKLSARKRFVPWGSSSPIPIPIPRSALDDSKFNVAVAVADVAEELKPSLPPGIDPLVLWH 144
Query: 161 PEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLG 220
P++ ++ N ITVDPLLVR+LRPHQREGVQFMF+CVSGL IHGCILADDMGLG
Sbjct: 145 PQDSEDANANFTTITVDPLLVRYLRPHQREGVQFMFDCVSGLSTTPNIHGCILADDMGLG 204
Query: 221 KTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
KTLQSI LLYTLL QGFDGKPMV+KAIIVTPTSLVSNWEAEIKKWVG RV L+ALCESTR
Sbjct: 205 KTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVPLVALCESTR 264
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
+DV+SGID+FT P S+LQVLIVSYETFRMHSSKFS ++SCDLLICDEAHRLKNDQT+TNR
Sbjct: 265 EDVISGIDNFTSPKSNLQVLIVSYETFRMHSSKFSSTDSCDLLICDEAHRLKNDQTITNR 324
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDLEEFFAMVNFTNPGILGD A+FRRYYE IICGREP AT
Sbjct: 325 ALAALPCKRRILLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPAAT 384
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ-----SELYN 436
EEKKLG E+S+ELS VN+FILRRTNALLSNHLPPKI+EVVCCKLTPLQ +EL N
Sbjct: 385 AEEKKLGAEQSAELSVNVNRFILRRTNALLSNHLPPKIVEVVCCKLTPLQNKIIKTELIN 444
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
S+ VKRAI+EE KQSKILAYITALKKLCNHPKLIYDTI+SG+PGT+GFEDCIRFFP
Sbjct: 445 PCPQSQ-VKRAITEELKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFP 503
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
PEM SGRSGSWTGG GAWVELSGKMHVLARLL HLRQRT+DRIVLVSNYTQTLDLFAQLC
Sbjct: 504 PEMLSGRSGSWTGGHGAWVELSGKMHVLARLLAHLRQRTNDRIVLVSNYTQTLDLFAQLC 563
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
RERRYP+LRLDG+TSISKRQKLVN FNDPSK+EFVFLLSSKAGGCGLNLIGGNRLVLFDP
Sbjct: 564 RERRYPHLRLDGSTSISKRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDP 623
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPANDKQAAARVWRDGQKKRV+IYRFLS GTIEEKVYQRQMSKEGLQKVIQQEQTDS
Sbjct: 624 DWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSL 683
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQS 736
QGN LSTE+LRDLFTFH++++SEIHENM C+RCQ + DG S E S + +S
Sbjct: 684 VAQGNLLSTENLRDLFTFHENIKSEIHENMQCSRCQTF-DGPRST----EAQSTITDSES 738
Query: 737 DQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEV 796
D+E +DIGGFA +AGCL LK SEKQ+G+PLEEDL +WGHHF+ SVPDAILQASAGDEV
Sbjct: 739 DEETSDIGGFAEIAGCLQNLKRSEKQVGSPLEEDLGSWGHHFFPTSVPDAILQASAGDEV 798
Query: 797 TFVFTNQVDGKLVPIESKVSPKMQATEGNKNPNNHITNPKPKLDQRSKLLSQHHKLLKDV 856
TFVFTNQV+G+LVP+ES +SPK+Q K+P + K Q+ S H++L
Sbjct: 799 TFVFTNQVNGRLVPVESIMSPKLQ----QKDPKKELLKSKQNGKQKPTPFSLHNRL---- 850
Query: 857 PSLENSAKFSLSASSQPKSMRTSLKGAIKPKLSFGNQ-LPLKRFSPDNVEHDD 908
L ++S + S+ A KP+ S ++ LP KR P N+ D+
Sbjct: 851 ---------PLQSASVGITKNISMNVAFKPQYSLVSKVLPQKRSCPANINDDN 894
>gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
Length = 959
Score = 1241 bits (3212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/980 (67%), Positives = 746/980 (76%), Gaps = 95/980 (9%)
Query: 2 EDDEEILSDSDPSDSSDGYTIDREDADYNDDNDDGDDEASAADSAPSDEDRKSKNVDALV 61
E+DEEILS SD DSSD Y D +D++ +DN + +D A S SD DRKSKNV L+
Sbjct: 3 EEDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVV--SLSSDADRKSKNVKDLL 60
Query: 62 RGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSS 121
RGNLVV+RQ LLPRVLSV++GAAVCRKPFKPPCS+GYD+ QL+RRL ARKRFVPWGSS
Sbjct: 61 RGNLVVQRQPLLPRVLSVSDGAAVCRKPFKPPCSHGYDS-TGQLSRRLSARKRFVPWGSS 119
Query: 122 RPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDG-GNLVPITVDPLL 180
PV+V + +L+ +E + EE LPP ++PLVLWQ EE DG N+ I V +L
Sbjct: 120 TPVVVALPTKLEASTNIERDEEEEVVCLPPDIEPLVLWQSEE---DGMSNVTTIMVHSVL 176
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK 240
V+FLRPHQREGVQFMF+CVSGL +A I+GCILADDMGLGKTLQSI LLYTLLCQGFDG
Sbjct: 177 VKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGT 236
Query: 241 PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
PMVKKAIIVTPTSLVSNWEAEIKKWVG R+QLIALCESTRDDV+SGIDSFT P S+LQVL
Sbjct: 237 PMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVL 296
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I+SYETFRMHSSKF SESCDLLICDEAHRLKNDQTLTNR N
Sbjct: 297 IISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQN 356
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DLEEFFAMVNFTNPG LGDAA+FR YYE IICGREPTATEEEK L +RS+ELS+KVNQ
Sbjct: 357 DLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQ 416
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRTNALLSNHLPPKIIEVVCCK+T LQS LYNHFI SKN+KRA+++ KQ+K+LAYI
Sbjct: 417 FILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYI 476
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
TALKKLCNHPKLIYDTIKSGNPGT GFE+C+ FFP EMFSGRSG+WTGGDGAWVELSGKM
Sbjct: 477 TALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKM 536
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
HVL+RLL +LR++TDDRIVLVSNYTQTLDLFAQLCRERRYP+LRLDG+T+ISKRQKLVN
Sbjct: 537 HVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNR 596
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
NDP+K+EF FLLSSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAARVWRDGQKKRV++
Sbjct: 597 LNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYV 656
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV--- 698
YRFLSTGTIEEKVYQRQMSKEGLQKVIQ EQTD+S QGN LSTEDLRDLF+FH DV
Sbjct: 657 YRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRYV 716
Query: 699 ----------------------------------------------RSEIHENMHCTRCQ 712
RSEIHE M C+RCQ
Sbjct: 717 FLLKSGNVLCPLRTSFLYPLLGTDFVPQDDTHSNGLSQSLFSGNVARSEIHEKMSCSRCQ 776
Query: 713 NYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLN 772
N G E+I EG+E N + Q DQE DIGGFA AGC + LK+SE+Q+GTPLEEDL
Sbjct: 777 NDASGTENIEEGNENNVDDNACQIDQE--DIGGFAKDAGCFNLLKNSERQVGTPLEEDLG 834
Query: 773 NWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPK-MQATEGNKN-PNN 830
+WGHHF S SVPDAILQASAGDEVTFVFTNQVDGKLVPIES VSPK +++ E N+N P N
Sbjct: 835 SWGHHFTSKSVPDAILQASAGDEVTFVFTNQVDGKLVPIESNVSPKTVESEEHNRNQPVN 894
Query: 831 HITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLSASSQPKSMRTSLKGAIKPKLSF 890
KP+ QR + + L+ + E + + LS + IK
Sbjct: 895 KRAFNKPQ--QRPR------EPLQPLSLNETTKRVKLSTYKRLHGNSNIDDAQIK----- 941
Query: 891 GNQLPLKRFSPDNVEHDDDF 910
+ L+R + +V HDDDF
Sbjct: 942 ---MSLQRPNLVSVNHDDDF 958
>gi|334185464|ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana]
gi|332642688|gb|AEE76209.1| Rad54-like protein [Arabidopsis thaliana]
Length = 908
Score = 1238 bits (3203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/931 (70%), Positives = 740/931 (79%), Gaps = 48/931 (5%)
Query: 2 EDDEEILSDSDPSDSSDGYTIDREDADYNDDNDDGDDEASAADSAPSDEDRKSKNVDALV 61
E+DEEILS SD DSSD Y D +D++ +DN + +D A S SD DRKSKNV L+
Sbjct: 3 EEDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVV--SLSSDADRKSKNVKDLL 60
Query: 62 RGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSS 121
RGNLVV+RQ LLPRVLSV++GAAVCRKPFKPPCS+GYD+ QL+RRL ARKRFVPWGSS
Sbjct: 61 RGNLVVQRQPLLPRVLSVSDGAAVCRKPFKPPCSHGYDS-TGQLSRRLSARKRFVPWGSS 119
Query: 122 RPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDG-GNLVPITVDPLL 180
PV+V + +L+ +E + EE LPP ++PLVLWQ EE DG N+ I V +L
Sbjct: 120 TPVVVALPTKLEASTNIERDEEEEVVCLPPDIEPLVLWQSEE---DGMSNVTTIMVHSVL 176
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK 240
V+FLRPHQREGVQFMF+CVSGL +A I+GCILADDMGLGKTLQSI LLYTLLCQGFDG
Sbjct: 177 VKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGT 236
Query: 241 PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
PMVKKAIIVTPTSLVSNWEAEIKKWVG R+QLIALCESTRDDV+SGIDSFT P S+LQVL
Sbjct: 237 PMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVL 296
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I+SYETFRMHSSKF SESCDLLICDEAHRLKNDQTLTNR N
Sbjct: 297 IISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQN 356
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DLEEFFAMVNFTNPG LGDAA+FR YYE IICGREPTATEEEK L +RS+ELS+KVNQ
Sbjct: 357 DLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQ 416
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRTNALLSNHLPPKIIEVVCCK+T LQ+ YN + +KRA+++ KQ+K+LAYI
Sbjct: 417 FILRRTNALLSNHLPPKIIEVVCCKMTTLQTT-YNGCL-CMQLKRALADNAKQTKVLAYI 474
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
TALKKLCNHPKLIYDTIKSGNPGT GFE+C+ FFP EMFSGRSG+WTGGDGAWVELSGKM
Sbjct: 475 TALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKM 534
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
HVL+RLL +LR++TDDRIVLVSNYTQTLDLFAQLCRERRYP+LRLDG+T+ISKRQKLVN
Sbjct: 535 HVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNR 594
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
NDP+K+EF FLLSSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAARVWRDGQKKRV++
Sbjct: 595 LNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYV 654
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YRFLSTGTIEEKVYQRQMSKEGLQKVIQ EQTD+S QGN LSTEDLRDLF+FH DVRSE
Sbjct: 655 YRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSE 714
Query: 702 IHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEK 761
IHE M C+RCQN G E+I EG+E N + Q DQE DIGGFA AGC + LK+SE+
Sbjct: 715 IHEKMSCSRCQNDASGTENIEEGNENNVDDNACQIDQE--DIGGFAKDAGCFNLLKNSER 772
Query: 762 QLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPK-MQ 820
Q+GTPLEEDL +WGHHF S SVPDAILQASAGDEVTFVFTNQVDGKLVPIES VSPK ++
Sbjct: 773 QVGTPLEEDLGSWGHHFTSKSVPDAILQASAGDEVTFVFTNQVDGKLVPIESNVSPKTVE 832
Query: 821 ATEGNKN-PNNHITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLSASSQPKSMRTS 879
+ E N+N P N KP+ QR + + L+ + E + + LS +
Sbjct: 833 SEEHNRNQPVNKRAFNKPQ--QRPR------EPLQPLSLNETTKRVKLSTYKRLHGNSNI 884
Query: 880 LKGAIKPKLSFGNQLPLKRFSPDNVEHDDDF 910
IK + L+R + +V HDDDF
Sbjct: 885 DDAQIK--------MSLQRPNLVSVNHDDDF 907
>gi|403399531|sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
Short=OsRad54
gi|144369229|dbj|BAF56217.1| OsRad54 [Oryza sativa Japonica Group]
Length = 980
Score = 1209 bits (3128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/791 (73%), Positives = 655/791 (82%), Gaps = 32/791 (4%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLAR 107
+D +RKS+NVDALVRGNLVV+RQ L+PR+LSV++ AA+ RKPFKPPC NGY N+QLAR
Sbjct: 100 NDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLAR 159
Query: 108 RLCARKRFVPWGSSRPVLVTITNRL-DLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQN 166
RL ARKRFVPWGS +P +TN L P ++ +E +LPPG++PL+LWQPE
Sbjct: 160 RLSARKRFVPWGSVQPF--AVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDK 217
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+ N I VD LLVR+LRPHQREGVQFMF+CVSGLLN GI GCILADDMGLGKTLQSI
Sbjct: 218 ENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSI 277
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
LLYTLLCQGFD KPMVK+A++VTPTSLVSNWE+EI KW+ GRVQL+ALCESTR DV+SG
Sbjct: 278 TLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSG 337
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
I+SF P S LQVLIVSYETFRMHSSKF SCDLLICDEAHRLKNDQTLTN+
Sbjct: 338 IESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALP 397
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDLEEFF+MVNFTNPG+LGDA YFRRYYE IICGREPTA+ EEK L
Sbjct: 398 CKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNL 457
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G ERS+ELSAKVN FILRRTNALLSNHLPPKI+EVVCCKLT LQ+ LYNHFIHSKNVKR
Sbjct: 458 GSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRL 517
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
ISE TKQSK+LAYITALKKLCNHPKLIYDTIKS N G +GF+DC+RFFPPE+FSGRSGSW
Sbjct: 518 ISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSW 577
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
TGG G WVELSGKMHVLARLLGHLR +TDDRIVLVSNYTQTLDLFAQLCRERRYPY+RLD
Sbjct: 578 TGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLD 637
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G TSI+KRQKLVN FNDPS++EFVFLLSSKAGGCGLNL+GGNRL+LFDPDWNPANDKQAA
Sbjct: 638 GATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAA 697
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKKRV+IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ D QG+ LSTED
Sbjct: 698 ARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADGK-MQGSSLSTED 756
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQNYD-----DGAESIGEGDETNSANKNDQSDQEVTD 742
LRDLFTFH+ +RSEIHEN+ C RC N D DG++ E ++N + S D
Sbjct: 757 LRDLFTFHEQIRSEIHENLKCNRC-NKDGCMVLDGSKFDSAATEHEASNSGENS---YID 812
Query: 743 IGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTN 802
IGGF ++GC+ K+ SS +Q+G+P EEDL +WGHH +VPD ILQ S+GDEV+FVFTN
Sbjct: 813 IGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSDPSTVPDTILQCSSGDEVSFVFTN 872
Query: 803 QVDGKLVPIES 813
Q+DGKLVP+ES
Sbjct: 873 QIDGKLVPVES 883
>gi|357143796|ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Brachypodium distachyon]
Length = 965
Score = 1205 bits (3117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/875 (68%), Positives = 683/875 (78%), Gaps = 53/875 (6%)
Query: 3 DDEEILS-DSDPSDSSD----GYTIDREDADYNDDNDDG--DDEA--------------- 40
D+EE+++ SDP +S G +D ++ + +D G DDEA
Sbjct: 16 DEEEVVALSSDPDESESEPEGGAEVDDDEEYVGESSDAGGVDDEAEEGGGGSDNGGGGRL 75
Query: 41 ---SAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNG 97
+ + DE+RKS+NVDALVRGNLVV+RQ L+PR+LSV++ AA+ RKPFKPPC NG
Sbjct: 76 VRGARRGAVAPDEERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCENG 135
Query: 98 YDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLV 157
Y N+ LARRL ARKRFVPWGS +P V I+N ++ +E+ +LPPG++PL+
Sbjct: 136 YSENNEHLARRLSARKRFVPWGSMQPFAV-ISNLPQSSTIASDDSLEKEESLPPGIEPLI 194
Query: 158 LWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDM 217
LWQPE + N I VD LLVR+LRPHQREGVQFMF+CVSGLL+ GI GCILADDM
Sbjct: 195 LWQPEGCDKENNNFAAIEVDNLLVRYLRPHQREGVQFMFDCVSGLLSDDGIAGCILADDM 254
Query: 218 GLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
GLGKTLQSIALLYTLL QGFDGKPMVK+A+IVTPTSLVSNWE+EI KW+ G+VQL+ALCE
Sbjct: 255 GLGKTLQSIALLYTLLAQGFDGKPMVKRAVIVTPTSLVSNWESEISKWLKGKVQLLALCE 314
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
STR DV+SGI SF P S LQVLI+SYETFRMHSSKF SCDLLICDEAHRLKNDQTL
Sbjct: 315 STRADVLSGIGSFLKPLSRLQVLIISYETFRMHSSKFERPASCDLLICDEAHRLKNDQTL 374
Query: 338 TNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
TN+ NDLEEFF+MVNFTNPG+LGDAAYFRRYYE IICGREP
Sbjct: 375 TNKALAALPCTRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDAAYFRRYYEAPIICGREP 434
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
TAT EEKKLG ERS ELSAKVNQFILRRTNALLSNHLPPKI+EVVCCKLTPLQ+ LYNHF
Sbjct: 435 TATAEEKKLGSERSGELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQTTLYNHF 494
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
IHSKNVKR ISEE K+SKILAYITALKKLCNHPKLIYDTIKS G + F+DC+RFFPPE
Sbjct: 495 IHSKNVKRLISEEAKRSKILAYITALKKLCNHPKLIYDTIKSNKSGGSDFDDCLRFFPPE 554
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
+F GRSGSWTGG G WVELSGKMHVLARLLGHLR +TDDRIVLVSNYTQTLDLFAQLCRE
Sbjct: 555 LFQGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRE 614
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
RRYPY+RLDG TSI+KRQKLVN FND S++EFVFLLSSKAGGCGLNL+GGNRLVLFDPDW
Sbjct: 615 RRYPYVRLDGATSINKRQKLVNQFNDLSRDEFVFLLSSKAGGCGLNLVGGNRLVLFDPDW 674
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPANDKQAAARVWRDGQKKRV+IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ ++
Sbjct: 675 NPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQGNTKMQ 734
Query: 679 -QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQS- 736
QG LSTEDLRDLFTFH+ VRSEIHEN+ C RC N D G E+ + N S
Sbjct: 735 DQGCSLSTEDLRDLFTFHEQVRSEIHENLKCNRC-NKDSYMLLDGNSLESAAIEHNKIST 793
Query: 737 --DQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGD 794
++ TDIGGF ++GC+ K+ SS +Q+ P EEDL +WGHH +VPD ILQ+SAGD
Sbjct: 794 SGEKYYTDIGGFGEISGCVQKMNSSNQQIDQPSEEDLGSWGHHSDPSTVPDTILQSSAGD 853
Query: 795 EVTFVFTNQVDGKLVPIESKV---SPKMQATEGNK 826
EV+FVFTNQ+DGKLVP+ES V +P G K
Sbjct: 854 EVSFVFTNQIDGKLVPVESMVRLTTPNGMTASGEK 888
>gi|358343867|ref|XP_003636017.1| DNA repair and recombination protein RAD54-like protein [Medicago
truncatula]
gi|355501952|gb|AES83155.1| DNA repair and recombination protein RAD54-like protein [Medicago
truncatula]
Length = 1004
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/948 (63%), Positives = 690/948 (72%), Gaps = 119/948 (12%)
Query: 52 RKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQ-LARRLC 110
RKS+NV+AL++GNL+VKRQSLLPRV S AA+CRKPFKPP S+ Y+N N+Q LARRL
Sbjct: 46 RKSQNVEALIKGNLIVKRQSLLPRVYSTNGAAAICRKPFKPP-SDAYNNNNNQDLARRLS 104
Query: 111 ARKRFVPWGSSRPVLV----TITNRLDLPRT-VENNVIEENFTLPPGVDPLVLWQP---E 162
ARKRFVPWGS+ P+ + T LDL + + ++ + LPP +DPL+LWQP
Sbjct: 105 ARKRFVPWGSTTPIPIPTSTTPLTELDLNISDHKEEAVKPSPPLPPEIDPLILWQPLHDN 164
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
+P N N I VDPLLVRFLRPHQREGVQFMF+CV+GL I+GCILADDMGLGKT
Sbjct: 165 DPSN--SNFTTIAVDPLLVRFLRPHQREGVQFMFDCVAGLCETPDINGCILADDMGLGKT 222
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
LQSI LLYTL+CQGFDGKPMV+KAIIVTPTSLVSNWEAEIKKWVG RV+L+ALCE+TR D
Sbjct: 223 LQSITLLYTLICQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGDRVRLVALCETTRQD 282
Query: 283 VVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-- 340
V+SGI+SF P QVLIVSYETFRMHS KFS S SCDLLICDEAHRLKNDQT+TN+
Sbjct: 283 VISGINSFKSPQGKFQVLIVSYETFRMHSEKFSSSGSCDLLICDEAHRLKNDQTITNKAL 342
Query: 341 -----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
NDLEEFFAMVNFTNPGILG A+FRR++E IICGREP AT E
Sbjct: 343 AALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGGIAHFRRHFEAPIICGREPAATAE 402
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EKKLG ER++ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS+LY HFI SKN
Sbjct: 403 EKKLGAERTAELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYKHFIQSKN 462
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
VKRAI+EE K SKILAYITALKKLCNHPKLIYDTI+SG+PGT+GFEDCIRFFPP M SGR
Sbjct: 463 VKRAITEELKHSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPNMLSGR 522
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
SGSWTGGDG WVELSGKM VLARLL LRQRT+DRIVLVSNYTQTLDLFAQLCRER+YP+
Sbjct: 523 SGSWTGGDGGWVELSGKMQVLARLLHQLRQRTNDRIVLVSNYTQTLDLFAQLCRERKYPH 582
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
LRLDG TSISKRQKLVN NDPSK+EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPAND
Sbjct: 583 LRLDGATSISKRQKLVNCLNDPSKDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAND 642
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
KQAAARVWRDGQKKRV+IYRFLS VYQRQM+KEGLQKVIQ+EQ DS A Q NFL
Sbjct: 643 KQAAARVWRDGQKKRVYIYRFLS-------VYQRQMAKEGLQKVIQREQNDSVAAQSNFL 695
Query: 684 STEDLRDLFTFHDDVRSEIHE------------------NMHCTR--------------- 710
STEDLR+LFTF ++V+ H H +
Sbjct: 696 STEDLRNLFTFDENVKQVAHAGPSDGPGYTLLGSGQSLGGKHLGKVVGAKAATDGSEHWL 755
Query: 711 CQNYDDGAESIGEGD---ETNSANKNDQ--------------------------SDQEVT 741
C D+ E + GD ETN + ++ D E
Sbjct: 756 CAKNDNEWELVAVGDDQQETNGSEIHENMRCSRCQNNDGPQDTDVLSTMINSECGDDETA 815
Query: 742 DIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFT 801
DIGGFA +AGCL LK+SEKQ+G PLEEDL++WGHH + SVPD +LQASAGDEVTFVFT
Sbjct: 816 DIGGFAEIAGCLGNLKTSEKQVGNPLEEDLSSWGHHLFPTSVPDGVLQASAGDEVTFVFT 875
Query: 802 NQVDGKLVPIESKVSPKMQATEGNKNPNNHITNPKPKLDQRSKLLSQHHKLLKDVPSLEN 861
NQVDGKLVP++S +SPK+Q E +K P ++++S + H+KL+ + S N
Sbjct: 876 NQVDGKLVPVDS-ISPKLQKKELHK--------PSRNVERKSTPFALHNKLVP-LRSASN 925
Query: 862 SAKFSLSAS---------SQPKSMRTSLKGAIKPKLSFGNQLPLKRFS 900
A S S+S + + ++ A+ K S N+LP ++ S
Sbjct: 926 IANVSCSSSIAWTKKAKNCERTTQNIAMSVALNTKHSLVNELPRQKRS 973
>gi|222623720|gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
Length = 952
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/791 (70%), Positives = 627/791 (79%), Gaps = 60/791 (7%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLAR 107
+D +RKS+NVDALVRGNLVV+RQ L+PR+LSV++ AA+ RKPFKPPC NGY N+QLAR
Sbjct: 100 NDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLAR 159
Query: 108 RLCARKRFVPWGSSRPVLVTITNRL-DLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQN 166
RL ARKRFVPWGS +P +TN L P ++ +E +LPPG++PL+LWQPE
Sbjct: 160 RLSARKRFVPWGSVQPF--AVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDK 217
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+ N I VD LLVR+LRPHQREGVQFMF+CVSGLLN GI GCILADDMGLGKTLQSI
Sbjct: 218 ENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSI 277
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
LLYTLLCQGFD KPMVK+A++VTPTSLVSNWE+EI KW+ GRVQL+ALCESTR DV+SG
Sbjct: 278 TLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSG 337
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
I+SF P S LQVLIVSYETFRMHSSKF SCDLLICDEAHRLKNDQTLTN+
Sbjct: 338 IESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALP 397
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDLEEFF+MVNFTNPG+LGDA YFRRYYE IICGREPTA+ EEK L
Sbjct: 398 CKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNL 457
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G ERS+ELSAKVN FILRRTNALLSNHLPPKI+EVVCCKLT LQ+ LYNHFIHSKNVKR
Sbjct: 458 GSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRL 517
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
ISE TKQSK+LAYITALKKLCNHPKLIYDTIKS N G +GF+DC+RFFPPE+FSGRSGSW
Sbjct: 518 ISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSW 577
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
TGG G WVELSGKMHVLARLLGHLR +TDDRIVLVSNYTQTLDLFAQLCRERRYPY+RLD
Sbjct: 578 TGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLD 637
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G TSI+KRQKLVN FNDPS++EFVFLLSSKAGGCGLNL+GGNRL+LFDPDWNPANDKQ
Sbjct: 638 GATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQ-- 695
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
VYQRQMSKEGLQKVIQQEQ D QG+ LSTED
Sbjct: 696 --------------------------VYQRQMSKEGLQKVIQQEQADGK-MQGSSLSTED 728
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQNYD-----DGAESIGEGDETNSANKNDQSDQEVTD 742
LRDLFTFH+ +RSEIHEN+ C RC N D DG++ E ++N + S D
Sbjct: 729 LRDLFTFHEQIRSEIHENLKCNRC-NKDGCMVLDGSKFDSAATEHEASNSGENS---YID 784
Query: 743 IGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTN 802
IGGF ++GC+ K+ SS +Q+G+P EEDL +WGHH +VPD ILQ S+GDEV+FVFTN
Sbjct: 785 IGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSDPSTVPDTILQCSSGDEVSFVFTN 844
Query: 803 QVDGKLVPIES 813
Q+DGKLVP+ES
Sbjct: 845 QIDGKLVPVES 855
>gi|218191620|gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
Length = 952
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/791 (70%), Positives = 627/791 (79%), Gaps = 60/791 (7%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLAR 107
+D +RKS+NVDALVRGNLVV+RQ L+PR+LSV++ AA+ RKPFKPPC NGY N+QLAR
Sbjct: 100 NDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLAR 159
Query: 108 RLCARKRFVPWGSSRPVLVTITNRL-DLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQN 166
RL ARKRFVPWGS +P +TN L P ++ +E+ +LPPG++PL+LWQPE
Sbjct: 160 RLSARKRFVPWGSVQPF--AVTNILPQSPAVSSDDSVEKEESLPPGIEPLILWQPEGCDK 217
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+ N I VD LLVR+LRPHQREGVQFMF+CVSGLLN GI GCILADDMGLGKTLQSI
Sbjct: 218 ENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSI 277
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
LLYTLLCQGFD KPMVK+A++VTPTSLVSNWE+EI KW+ GRVQL+ALCESTR DV+SG
Sbjct: 278 TLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSG 337
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
I+SF P S LQVLIVSYETFRMHSSKF SCDLLICDEAHRLKNDQTLTN+
Sbjct: 338 IESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALP 397
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDLEEFF+MVNFTNPG+LGDA YFRRYYE IICGREPTA+ EEK L
Sbjct: 398 CKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNL 457
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G ERS+ELSAKVN FILRRTNALLSNHLPPKI+EVVCCKLT LQ+ LYNHFIHSKNVKR
Sbjct: 458 GSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRL 517
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
ISE TKQSK+LAYITALKKLCNHPKLIYDTIKS N G +GF+DC+RFFPPE+FSGRSGSW
Sbjct: 518 ISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSW 577
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
TGG G WVELSGKMHVLARLLGHL +TDDRIVLVSNYTQTLDLFAQLCRERRYPY+RLD
Sbjct: 578 TGGGGMWVELSGKMHVLARLLGHLHLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLD 637
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G TSI+KRQKLVN FNDPS++EFVFLLSSKAGGCGLNL+GGNRL+LFDPDWNPANDKQ
Sbjct: 638 GATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQ-- 695
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
VYQRQMSKEGLQKVIQQEQ D QG+ LSTED
Sbjct: 696 --------------------------VYQRQMSKEGLQKVIQQEQADGK-MQGSSLSTED 728
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQNYD-----DGAESIGEGDETNSANKNDQSDQEVTD 742
LRDLFTFH+ VRSEIHEN+ C RC N D DG++ E ++N + S D
Sbjct: 729 LRDLFTFHEQVRSEIHENLKCNRC-NKDGCMVLDGSKFDSAATEHEASNSGENS---YID 784
Query: 743 IGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTN 802
IGGF ++GC+ K+ SS +Q+G+P EEDL +WGHH +VPD ILQ S+GDEV+FVFTN
Sbjct: 785 IGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSDPSTVPDTILQCSSGDEVSFVFTN 844
Query: 803 QVDGKLVPIES 813
Q+DGKLVP+ES
Sbjct: 845 QIDGKLVPVES 855
>gi|46805904|dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
Length = 912
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/791 (65%), Positives = 588/791 (74%), Gaps = 100/791 (12%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLAR 107
+D +RKS+NVDALVRGNLVV+RQ L+PR+LSV++ AA+ RKPFKPPC NGY N+QLAR
Sbjct: 100 NDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLAR 159
Query: 108 RLCARKRFVPWGSSRPVLVTITNRL-DLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQN 166
RL ARKRFVPWGS +P +TN L P ++ +E +LPPG++PL+LWQPE
Sbjct: 160 RLSARKRFVPWGSVQPF--AVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDK 217
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+ N I VD LLVR+LRPHQREGVQFMF+CVSGLLN GI GCILADDMGLGKTLQSI
Sbjct: 218 ENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSI 277
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
LLYTLLCQGFD KPMVK+A++VTPTSLVSNWE+EI KW+ GRVQL+ALCESTR DV+SG
Sbjct: 278 TLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSG 337
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
I+SF P S LQVLIVSYETFRMHSSKF SCDLLICDEAHRLKNDQTLTN+
Sbjct: 338 IESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALP 397
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDLEEFF+MVNFTNPG+LGDA YFRRYYE IICGREPTA+ EEK L
Sbjct: 398 CKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNL 457
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G ERS+ELSAKVN FILRRTNALLSNHLPPKI+EVVCCKLT LQ+ LYNHFIHSKNVKR
Sbjct: 458 GSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRL 517
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
ISE TKQSK+LAYITALKKLCNHPKLIYDTIKS N G +GF+DC+RFFPPE+FSGRSG
Sbjct: 518 ISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSG-- 575
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
TLDLFAQLCRERRYPY+RLD
Sbjct: 576 --------------------------------------FVTLDLFAQLCRERRYPYIRLD 597
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G TSI+KRQKLVN FNDPS++EFVFLLSSKAGGCGLNL+GGNRL+LFDPDWNPANDKQ
Sbjct: 598 GATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQ-- 655
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
VYQRQMSKEGLQKVIQQEQ D QG+ LSTED
Sbjct: 656 --------------------------VYQRQMSKEGLQKVIQQEQADGK-MQGSSLSTED 688
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQNYD-----DGAESIGEGDETNSANKNDQSDQEVTD 742
LRDLFTFH+ +RSEIHEN+ C RC N D DG++ E ++N + S D
Sbjct: 689 LRDLFTFHEQIRSEIHENLKCNRC-NKDGCMVLDGSKFDSAATEHEASNSGENS---YID 744
Query: 743 IGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTN 802
IGGF ++GC+ K+ SS +Q+G+P EEDL +WGHH +VPD ILQ S+GDEV+FVFTN
Sbjct: 745 IGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSDPSTVPDTILQCSSGDEVSFVFTN 804
Query: 803 QVDGKLVPIES 813
Q+DGKLVP+ES
Sbjct: 805 QIDGKLVPVES 815
>gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
Length = 852
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/835 (60%), Positives = 613/835 (73%), Gaps = 72/835 (8%)
Query: 50 EDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRL 109
E+RKS+NV AL+RG+LVVKRQ+L+P+VL+VT+GAAV R+PFK PC G N +D+L RRL
Sbjct: 25 ENRKSENVAALLRGDLVVKRQALIPKVLTVTDGAAVIRRPFKSPCPGGQTN-SDELLRRL 83
Query: 110 CARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGG 169
ARK+FVPW +P+L N LP ++ + E + LP +PLVLWQP+ DG
Sbjct: 84 SARKKFVPW-KRQPLLPLSPNVETLP--IQEDPSEGSIELPDDFEPLVLWQPDG-NEDGA 139
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGL-----LNAAGIHGCILADDMGLGKTLQ 224
+V VDP++ +FLRPHQREGVQFMFECV+GL A GCILADDMGLGKTLQ
Sbjct: 140 TIV---VDPIVAKFLRPHQREGVQFMFECVTGLREFSKAGDAAWSGCILADDMGLGKTLQ 196
Query: 225 SIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
SI LL+TLL QGF G P+ K+ IIVTPTSLVSNWE+EIKKW+GGR +IA+CE++R +V+
Sbjct: 197 SITLLWTLLRQGFQGSPIAKRIIIVTPTSLVSNWESEIKKWLGGRASVIAICEASRAEVL 256
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
+ SF P ++ Q+LI+SYETFR+H+ KF +CDLLICDEAHRLKND TLTN+
Sbjct: 257 QDVASFLSPRNAFQILIISYETFRLHAGKFQKEGACDLLICDEAHRLKNDHTLTNQALAS 316
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
NDLEEF+AMVNFTNPGILGD A FRRYY+ I+ GREP ATEE +
Sbjct: 317 LQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGDVAAFRRYYQNPILRGREPEATEEAR 376
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
KLG+ERS+ELS KVNQFILRRTNALLSNHLPPKI+EVVCCKLT LQ ELY HFIHSKNV+
Sbjct: 377 KLGLERSAELSEKVNQFILRRTNALLSNHLPPKIVEVVCCKLTNLQRELYTHFIHSKNVR 436
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
A+ ++ K++++LA ITALKKLC+HPKLIYDT+++G GFE+C++FFP EM +GR
Sbjct: 437 LALQDKAKRARVLASITALKKLCSHPKLIYDTVRAGGSEAAGFENCMQFFPKEMHTGRG- 495
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
T DG+WV+LSGKM VLARLL +LR++T+DRIVLVSNYTQTLDLFAQLCRER YPY+R
Sbjct: 496 --TPSDGSWVKLSGKMFVLARLLENLRKKTNDRIVLVSNYTQTLDLFAQLCRERNYPYVR 553
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG+TSI KRQKLV FNDPS+NEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ
Sbjct: 554 LDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 613
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT------- 678
AAARVWRDGQKKRV+IYRFL+TGTIEEKVYQRQ+SKEGLQKVI DS A
Sbjct: 614 AAARVWRDGQKKRVYIYRFLATGTIEEKVYQRQISKEGLQKVI---SGDSKAEVRKLIKF 670
Query: 679 --------QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
Q N LSTEDLRDLFT D+ S+ H+ + C RC +
Sbjct: 671 LKRVVVLFQVNALSTEDLRDLFTLR-DISSDTHDTLDCERC----------------DVE 713
Query: 731 NKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA 790
N ++ ++ DIG FAG AGCL + + EKQ+G P EEDL W HH + +VPD ILQ
Sbjct: 714 NVPNELANQLGDIGAFAGTAGCLERQRHWEKQIGEPAEEDLIRWAHHSHPSTVPDVILQW 773
Query: 791 SAGDEVTFVFTNQVDGKLVPIESKVSPKMQATEGNKNPNNHITNPKPKLDQRSKL 845
+AG+EV+FVFT Q+DGK+VPI+S + P A E ++ P Q+ KL
Sbjct: 774 AAGEEVSFVFTCQIDGKVVPIDS-ILPSA-AAEEERDSTRTARTTLPTFAQKRKL 826
>gi|297599954|ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group]
gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa Japonica Group]
Length = 879
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/791 (62%), Positives = 563/791 (71%), Gaps = 133/791 (16%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLAR 107
+D +RKS+NVDALVRGNLVV+RQ L+PR+LSV++ AA+ RKPFKPPC NGY N+QLAR
Sbjct: 100 NDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLAR 159
Query: 108 RLCARKRFVPWGSSRPVLVTITNRL-DLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQN 166
RL ARKRFVPWGS +P +TN L P ++ +E +LPPG++PL+LWQPE
Sbjct: 160 RLSARKRFVPWGSVQPF--AVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDK 217
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+ N I VD LLVR+LRPHQREGVQFMF+CVSGLLN GI GCILADDMGLGKTLQSI
Sbjct: 218 ENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSI 277
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
LLYTLLCQGFD KPMVK+A++VTPTSLVSNWE+EI KW+ GRVQL+ALCESTR DV+SG
Sbjct: 278 TLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSG 337
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
I+SF P S LQVLIVSYETFRMHSSKF SCDLLICDEAHRLKNDQTLTN+
Sbjct: 338 IESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALP 397
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDLEEFF+MVNFTNPG+LGDA YFRRYYE IICGREPTA+ EEK L
Sbjct: 398 CKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNL 457
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G ERS+ELSAKVN FILRRTNALLSNHLPPKI+EVVCCKLT LQ+ LYNHFIHSKNVKR
Sbjct: 458 GSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRL 517
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
ISE TKQSK+LAYITALKKLCNHPKLIYDTIKS N G +GF+DC+RFFPPE+FSGRSG
Sbjct: 518 ISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSG-- 575
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
TLDLFAQLCRERRYPY+RLD
Sbjct: 576 --------------------------------------FVTLDLFAQLCRERRYPYIRLD 597
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G TSI+KRQKLVN FNDPS++EFVFLLSSKAGGCGLNL+GGNRL+LFDPDWNPANDKQ
Sbjct: 598 GATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQ-- 655
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
VYQRQMSKEGLQKVIQQEQ D QG+ LSTED
Sbjct: 656 --------------------------VYQRQMSKEGLQKVIQQEQADGK-MQGSSLSTED 688
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQNYD-----DGAESIGEGDETNSANKNDQSDQEVTD 742
LRDLFTFH+ +RSEIHEN+ C RC N D DG++ E ++N + S D
Sbjct: 689 LRDLFTFHEQIRSEIHENLKCNRC-NKDGCMVLDGSKFDSAATEHEASNSGENS---YID 744
Query: 743 IGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTN 802
IGGF ++GC+ K+ SS +Q V+FVFTN
Sbjct: 745 IGGFGAISGCVQKMNSSNQQ---------------------------------VSFVFTN 771
Query: 803 QVDGKLVPIES 813
Q+DGKLVP+ES
Sbjct: 772 QIDGKLVPVES 782
>gi|302780671|ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
gi|300160409|gb|EFJ27027.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
Length = 1011
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/820 (58%), Positives = 577/820 (70%), Gaps = 102/820 (12%)
Query: 50 EDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRL 109
E+RKS+NV AL+RG+LVVKRQ+L+P+VL+VT+GAAV R+PFK PC G N +D+L RRL
Sbjct: 25 ENRKSENVAALLRGDLVVKRQALIPKVLTVTDGAAVIRRPFKSPCPGGQSN-SDELLRRL 83
Query: 110 CARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGG 169
ARKRFVPW +P+L N LP ++ + E + LP +PLVLWQP+ DG
Sbjct: 84 SARKRFVPW-KRQPLLPLSPNVETLP--IQEDPSEGSVELPDDFEPLVLWQPDG-NEDGA 139
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGL-----LNAAGIHGCILADDMGLGKTLQ 224
+V VDP++ +FLRPHQREGVQFMFECV+GL A GCILADDMGLGKTLQ
Sbjct: 140 TIV---VDPIVAKFLRPHQREGVQFMFECVTGLREFSKAGDAAWSGCILADDMGLGKTLQ 196
Query: 225 SIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
SI LL+TLL QGF G P+ K+ IIVTPTSL
Sbjct: 197 SITLLWTLLRQGFQGSPIAKRIIIVTPTSL------------------------------ 226
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
+LI+SYETFR+H+ KF +CDLLICDEAHRLKND TLTN
Sbjct: 227 --------------ILIISYETFRLHAGKFQKEGACDLLICDEAHRLKNDHTLTNQALAS 272
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+NDLEEF+AMVNFTNPGILG+ A FRRYY+ I+ GREP ATE+ +
Sbjct: 273 LQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGEVAAFRRYYQNPILRGREPEATEDAR 332
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
KLG+ERS+ELS KVNQFILRRTNALLSNHLPPKI+EVVCCKLT LQ ELY HFIHSKNV+
Sbjct: 333 KLGLERSAELSEKVNQFILRRTNALLSNHLPPKIVEVVCCKLTNLQRELYTHFIHSKNVR 392
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
A+ ++ K++++LA ITALKKLC+HPKLIYDT+++G GFE+C++FFP EM +GR
Sbjct: 393 LALQDKAKRARVLASITALKKLCSHPKLIYDTVRAGGSEAAGFENCMQFFPKEMQTGRG- 451
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
T DG+WV+LSGKM VLARLL +LR++T+DRIVLVSNYTQTLDLFAQLCRER YPY+R
Sbjct: 452 --TPSDGSWVKLSGKMFVLARLLENLRKKTNDRIVLVSNYTQTLDLFAQLCRERNYPYVR 509
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG+TSI KRQKLV FNDPS+NEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ
Sbjct: 510 LDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 569
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
AAARVWRDGQKKRV+IYRFL+TGTIEEKVYQRQMSKEGLQKVI + S + N LST
Sbjct: 570 AAARVWRDGQKKRVYIYRFLATGTIEEKVYQRQMSKEGLQKVI----SGDSKAEVNALST 625
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGG 745
EDLRDLFT D+ S+ H+ + C RC + N ++ ++ DIG
Sbjct: 626 EDLRDLFTLR-DISSDTHDTLDCERC----------------DVENVPNELANQLGDIGA 668
Query: 746 FAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVD 805
FA AGCL + + EKQ+G P EEDL W HH + +VPD ILQ +AG+EV+FVFT Q+D
Sbjct: 669 FAKTAGCLERQRHWEKQIGEPAEEDLIRWAHHSHPSTVPDVILQWAAGEEVSFVFTCQID 728
Query: 806 GKLVPIESKVSPKMQATEGNKNPNNHITNPKPKLDQRSKL 845
GK+VPI+S + P A E ++ P Q+ KL
Sbjct: 729 GKVVPIDS-ILPSAAAEE-ERDSTRTARTTLPTFAQKRKL 766
>gi|168051804|ref|XP_001778343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670320|gb|EDQ56891.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 921
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/811 (54%), Positives = 540/811 (66%), Gaps = 131/811 (16%)
Query: 37 DDEASAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSN 96
DDEA E +K++NV AL+RG++ V RQ+LLP+VL+V++ A V R+PFK PC
Sbjct: 56 DDEA---------ESQKAQNVAALIRGDVQVNRQALLPKVLTVSDAAVVIRRPFKSPCPK 106
Query: 97 GYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPL 156
N +L RRL ARKRF+PWG SR L +ITN +P LPPGV+PL
Sbjct: 107 ASSGSNIELLRRLSARKRFIPWGCSRSPLTSITN-TPIPLAPAKEEEPLKIELPPGVEPL 165
Query: 157 VLWQPEEPQNDGGN-------LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA--- 206
VLWQP+E NDGG+ L PI VDP L +FLR HQREGVQFMFECV+GL A
Sbjct: 166 VLWQPDE--NDGGSEEGPAEKLQPIIVDPHLTKFLRQHQREGVQFMFECVAGLRGMAISK 223
Query: 207 ----GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
GCILADDMGLGKTLQSI L++TLL QGFDG+PM + +I+TPTSLVSNWE EI
Sbjct: 224 DEKATSGGCILADDMGLGKTLQSITLMWTLLKQGFDGRPMATRVVIITPTSLVSNWEQEI 283
Query: 263 KKWVG-GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
KW+ V ++A+CESTR DV+ GI +F P + QVLI+SYETFRMH+++F SCD
Sbjct: 284 TKWLSHSTVNVLAMCESTRSDVLQGISTFLSPQNFYQVLIISYETFRMHAARFEKEGSCD 343
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
LLICDEAHRLKND+TLTN+ NDLEEF+AMVNFTNPG+LG+A+
Sbjct: 344 LLICDEAHRLKNDKTLTNQALASLPCFRRVLLSGTPMQNDLEEFYAMVNFTNPGVLGNAS 403
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
FR+YYE I+ GREP AT+E + + IERS+ELS KVNQFILRRTNALLSNHLPPKI+EV
Sbjct: 404 TFRKYYENPILTGREPDATDEARAISIERSAELSEKVNQFILRRTNALLSNHLPPKIVEV 463
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGN 482
VCCKLT LQ+ LY HFI SKNV++A+ ++TK++K+LA ITALKKLCNHPKLIYDTI++G
Sbjct: 464 VCCKLTELQTSLYRHFIRSKNVRQALEDQTKRAKVLASITALKKLCNHPKLIYDTIRAGG 523
Query: 483 PGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLV 542
GF DC++ FPP +
Sbjct: 524 SEAAGFGDCLKLFPPHL------------------------------------------- 540
Query: 543 SNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCG 602
TLDLFAQ+CRER YP++RLDGTTSI KRQKLV+ FNDP++NEF FLLSSKAGGCG
Sbjct: 541 -----TLDLFAQICRERNYPFVRLDGTTSIGKRQKLVSRFNDPNQNEFAFLLSSKAGGCG 595
Query: 603 LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKE 662
LNLIGGNRLVLFDPDWNPA DKQ V+QRQMSKE
Sbjct: 596 LNLIGGNRLVLFDPDWNPATDKQ----------------------------VFQRQMSKE 627
Query: 663 GLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIG 722
GLQKV+ +EQ+ + Q N LST+DLRDLFT +DVRS+ H+++ C RC
Sbjct: 628 GLQKVVDKEQSTDAKAQVNMLSTDDLRDLFTLREDVRSDTHDSISCERCD---------A 678
Query: 723 EGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMS 782
EG + +D S V DIG FA +AGC KL+S E+Q+GTP EEDL +W HH S +
Sbjct: 679 EGGPGEMTSTSDISAVMVEDIGEFAKVAGCAGKLRSWERQVGTPAEEDLLSWAHHSDSST 738
Query: 783 VPDAILQASAGDEVTFVFTNQVDGKLVPIES 813
+PDA+L+A++ ++++F FT Q+DGKL PI+S
Sbjct: 739 IPDAMLEAASRNQISFTFTCQIDGKLTPIDS 769
>gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 1131
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/789 (49%), Positives = 509/789 (64%), Gaps = 75/789 (9%)
Query: 53 KSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCAR 112
K++NV A++ G+L V R+ ++ L + AAV +PF+ P + + +LA+RL +
Sbjct: 49 KARNVQAMLSGSLQVARRPMVSG-LKCQDAAAVLARPFRAPFAGATAGHSAELAKRLAMK 107
Query: 113 KRFVPWG-------SSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQ 165
+RFVPWG + RP+ + + E+ LP GV+PLVLW+
Sbjct: 108 RRFVPWGGTKNIAHAGRPMQIG-----SFSSPMHAKKEEKEEELPEGVEPLVLWE----D 158
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
DGG PI VD +LV++LRPHQREGV+FMFECV GL + G GCILADDMGLGKTLQ
Sbjct: 159 ADGGTNRPIVVDNMLVKWLRPHQREGVKFMFECVMGLRDFDG-RGCILADDMGLGKTLQG 217
Query: 226 IALLYTLLCQGF-DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
I LL+T+LCQG G P K+A+IV PTSLVSNW+ E KW+ GRV+ + +CES+R DV+
Sbjct: 218 ITLLWTMLCQGVVTGTPTAKRALIVCPTSLVSNWDDECNKWLKGRVKTLPICESSRADVI 277
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
S ++ F P ++ QV+IVSYETFR+H+ +F +S L++CDEAHRLKN TLTN+
Sbjct: 278 SSVNRFLSPRNTAQVMIVSYETFRIHAERFGAEDSVQLVMCDEAHRLKNGDTLTNKALQS 337
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
N L+EF++MVNF NPG+LG A F ++YE I+ GREP ATE++
Sbjct: 338 VPCRRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTTAEFHKHYEKPILDGREPDATEKQL 397
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
L ER++ELS VN+F+LRRTN +LS HLPPK++EVVCCKL+PLQ +LY HF+ SK K
Sbjct: 398 ALAQERNAELSELVNKFVLRRTNTILSKHLPPKVVEVVCCKLSPLQQQLYQHFLDSKAAK 457
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTI---KSGNPGTTGFEDCIRFFPPEMFSG 502
A++ K + +LA ITALKKLCNHPKLIYD I K+ GFE C +F P M+
Sbjct: 458 AALT--GKSTMVLAAITALKKLCNHPKLIYDMINAEKNTGSAAAGFESCGAYFQPGMYDV 515
Query: 503 RSGSWTGGDG---AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
R G G W SGK VLARLL LR T DRIV++SNYTQTLDL LC++
Sbjct: 516 RGPHGRGKSGMCDGWEFHSGKFAVLARLLAILRAETKDRIVIISNYTQTLDLVQFLCKQN 575
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
YP+ RLDG TSI+KRQKLV FNDP++N FVFLLSSKAGGCG+NLIGGNRLVLFDPDWN
Sbjct: 576 NYPHCRLDGGTSITKRQKLVRQFNDPTENCFVFLLSSKAGGCGINLIGGNRLVLFDPDWN 635
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PANDKQAAAR WRDGQKK+ ++YR +TG+IEEKV+QRQ+SKE LQ V+ E T ++
Sbjct: 636 PANDKQAAARCWRDGQKKKCYLYRLFATGSIEEKVFQRQLSKESLQNVVNGEGTLEQSS- 694
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC--QNYDDGAESIGEGDETNSANKNDQSD 737
LS +DLR LFT S+ H+++ C +C ++YD
Sbjct: 695 ---LSKDDLRKLFTLDATTVSDTHDSVACEKCPGKHYDG--------------------- 730
Query: 738 QEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVT 797
+ G G G + E+Q E+ L WGHH + ++PD I++ +AGD+V+
Sbjct: 731 --LHGQAGVTGSGGPADDFQPWEEQDDDAEEQKLETWGHHHRACTLPDPIMRRAAGDDVS 788
Query: 798 FVFTNQVDG 806
FVF+ QV+G
Sbjct: 789 FVFSLQVEG 797
>gi|297741293|emb|CBI32424.3| unnamed protein product [Vitis vinifera]
Length = 1112
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/453 (78%), Positives = 384/453 (84%), Gaps = 19/453 (4%)
Query: 41 SAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDN 100
SA S SDE RKS+NVDAL+RGNLV++RQSLLPRVLSVT+GAAV RKPFKPP SNGY +
Sbjct: 33 SAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 92
Query: 101 GNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQ 160
NDQL RL ARKRFVPWGSSRP LV ITNR+++ E +V+EE+ +LP G+DPLVLW
Sbjct: 93 RNDQLVHRLWARKRFVPWGSSRPALVLITNRVNISSAAEKDVLEESVSLPAGIDPLVLWH 152
Query: 161 PEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLG 220
PEE + NL+PI VDPLLVRFLRPHQREGVQFMF+CVSGL + A I GCILADDMGLG
Sbjct: 153 PEESEEQADNLMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTANISGCILADDMGLG 212
Query: 221 KTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
KTLQSI LLYTLL QGFDGK MVKKAIIVTPTSLVSNWEAEIKKWVG RVQL+ALCESTR
Sbjct: 213 KTLQSITLLYTLLRQGFDGKAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTR 272
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
DDVV GIDSFT P S LQVLIVSYETFRMHSSKFS S SCDLLICDEAHRLKNDQTLTNR
Sbjct: 273 DDVVFGIDSFTSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNR 332
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDLEEFFAMVNFTNPGILGDA YFRRYYET IICGREPTA
Sbjct: 333 ALAALACKRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAA 392
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEEKKLG ERS+ELS+ VNQFILRRTNALLSNHLPPKI+EVVCC+L+PLQSELYNHFIHS
Sbjct: 393 EEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHFIHS 452
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
KNVK+ I+EE KQSKILAYITALKKLCNHPK+
Sbjct: 453 KNVKKVINEEMKQSKILAYITALKKLCNHPKVF 485
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/450 (75%), Positives = 377/450 (83%), Gaps = 16/450 (3%)
Query: 473 LIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR 532
LIYDT+KSGN GT+GFEDC+RFFPPEMFSGRSG+WTGG+G WVELSGKMHVLARLL HLR
Sbjct: 668 LIYDTVKSGNQGTSGFEDCMRFFPPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLR 727
Query: 533 QRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVF 592
Q+TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI+KRQKLVN F+DP K+EFVF
Sbjct: 728 QKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVF 787
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV+IYRFLSTGTIEE
Sbjct: 788 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEE 847
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
KV+QRQMSKEGLQKVIQQEQ DS TQGNFLSTEDLRDLF+FH++VRSEIHE M+C RCQ
Sbjct: 848 KVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQ 907
Query: 713 NYDDGAESIGEGDETNSANKNDQSDQ-EVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDL 771
NYD+ ES+ E D S N+ QS Q + DIGGFAG+ GCLHKLK SEKQ+GT LEEDL
Sbjct: 908 NYDERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTALEEDL 967
Query: 772 NNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPKMQATEGNKNPNNH 831
+WGHHF+S SVPDAI QASAGDEVTFVFTNQVDGKLVP+ESKV MQ E NKN
Sbjct: 968 GSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQGVEANKNQ--- 1024
Query: 832 ITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLSASSQP------KSMRTSLKG--- 882
++ + KL Q+ LLS+H + V + +S S+SS+P KSMRTS KG
Sbjct: 1025 -SDKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKPFHLAGIKSMRTS-KGTPS 1082
Query: 883 -AIKPKLSFGNQLPLKRFSPDNVEHDDDFE 911
+KPKLS G+QLPLKR SPD+V+HDDDFE
Sbjct: 1083 VTLKPKLSIGSQLPLKRLSPDSVQHDDDFE 1112
>gi|145349626|ref|XP_001419229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579460|gb|ABO97522.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 983
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/828 (48%), Positives = 513/828 (61%), Gaps = 93/828 (11%)
Query: 53 KSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCAR 112
K+ N+ +LV G L + + R L+V + A ++ FK P N N + +L RRL +R
Sbjct: 43 KAANIASLVNGTLETCARPYV-RGLTVEDPAVTLKRAFKSPFPNA-PNRSAELERRLASR 100
Query: 113 KRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGG--- 169
+ FVPWGS + LP+ + EE LP G++ LVLW+P+ + DGG
Sbjct: 101 RVFVPWGSKASDVARA-----LPKPTQCAATEEAIVLPEGIEDLVLWEPDR-EGDGGETS 154
Query: 170 ------NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTL 223
+ PI VD +L R+LRPHQREGV+FMFECV GL + G GCILADDMGLGKTL
Sbjct: 155 ATAGGASAKPIVVDRMLTRWLRPHQREGVKFMFECVMGLRDFEG-QGCILADDMGLGKTL 213
Query: 224 QSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV 283
Q I LL+TLL QG DG P VK+A+IV PTSLVSNW+ E KW+ GRV+ + +C+STR +V
Sbjct: 214 QGITLLWTLLKQGIDGTPAVKRALIVCPTSLVSNWDDECNKWLNGRVKTLPICDSTRAEV 273
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--- 340
VS + F P QV+IVSYETFR+HS +F+ + DL++CDEAHRLKN +TLTN+
Sbjct: 274 VSSVKQFLAPRHLAQVMIVSYETFRIHSDRFNFDGAVDLIMCDEAHRLKNGETLTNKALC 333
Query: 341 ----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
N L+EF++MV F NPG+LG F + +E I+ GREP ATE+E
Sbjct: 334 SVPCLRRVMLSGTPMQNHLDEFYSMVGFCNPGLLGTPPEFAKKFERPILAGREPDATEKE 393
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+ E +SELS VN+FILRRTN +LS HLPPK++EVVCCKL+PLQ LY HF+ SK
Sbjct: 394 LERAQEANSELSDLVNKFILRRTNTILSKHLPPKVVEVVCCKLSPLQQALYEHFLTSKAA 453
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTI---KSGNPGTTGFEDCIRFFPPEMF- 500
+A++ K + +L ITALKKLCNHPKLIYD I K+ +GF C FF P M+
Sbjct: 454 NQALT--GKATAVLPAITALKKLCNHPKLIYDMINGAKNTGQAASGFSTCAEFFTPGMYD 511
Query: 501 ---SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
G W E SGK VLARLL +LR T DRIV++SNYTQTLDL +CR
Sbjct: 512 GGGGRSGRGGGGMMHGWEEHSGKFAVLARLLANLRAETKDRIVIISNYTQTLDLVGNMCR 571
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
ER YP++RLDG+TSI KRQKLV FNDP+ N FVFLLSSKAGGCG+NLIGGNRLVLFDPD
Sbjct: 572 ERNYPFVRLDGSTSIGKRQKLVKQFNDPTSNSFVFLLSSKAGGCGINLIGGNRLVLFDPD 631
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPANDKQAAAR WRDGQKK+ ++YRFL+ GTIEEKV+QRQ+SKE LQ V+ S
Sbjct: 632 WNPANDKQAAARCWRDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVVN----GSGE 687
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC--QNYDD-GAESIGEGDETNSANKND 734
+ + +S ++LR LF+ S+ H+ C RC +N DD G + E
Sbjct: 688 LEQSVMSKDELRKLFSLDCTTYSDTHDTCGCKRCPARNGDDLGCDPDAE----------- 736
Query: 735 QSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGD 794
K E+Q+ E+ L+ W HH VPD +++ SAG+
Sbjct: 737 ---------------------YKEWEEQIDDADEQKLDEWAHHHRMDKVPDDMMKKSAGE 775
Query: 795 EVTFVFTNQVDGKLVPIESKVSP-----KMQATEGNKNPN--NHITNP 835
+V+FVF+ +V+G + ESK +P +A+E P +H T P
Sbjct: 776 DVSFVFSLKVEGAAID-ESKKAPAPEKKSEEASEKKPTPTMPSHSTRP 822
>gi|255082185|ref|XP_002508311.1| SNF2 super family [Micromonas sp. RCC299]
gi|226523587|gb|ACO69569.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1126
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/815 (49%), Positives = 518/815 (63%), Gaps = 87/815 (10%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLAR 107
S + K NV A++ G+L V+R+ ++ R L AAV +PF+ P + + +LAR
Sbjct: 38 SQAEIKRANVQAMLSGSLQVQRKPMI-RGLQCQNVAAVLAQPFRAPFAGATAGHSAELAR 96
Query: 108 RLCARKRFVPWGSS-------RPVLVT--ITNRLDLPRTVENNVIEENFTLPPGVDPLVL 158
RL AR+RFVPWGS+ RP+ V + L +P+ E+ V EE LPPGV+PLVL
Sbjct: 97 RLAARRRFVPWGSTSNIAHPGRPLGVAGPVGLGLGIPKPAED-VPEE---LPPGVEPLVL 152
Query: 159 WQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
W E +G L P++VD +LV+FLRPHQREGV+FMFECV GL G +GCILADDMG
Sbjct: 153 W--EGFDAEGKELPPVSVDNMLVKFLRPHQREGVKFMFECVMGLRGFEG-NGCILADDMG 209
Query: 219 LGKTLQSIALLYTLLCQGFDGK-PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
LGKTLQ I LL+TLL QG G P+ K+A+IV PTSLVSNW+ E KW+ G+V+ + +CE
Sbjct: 210 LGKTLQGITLLWTLLKQGITGDGPIAKRALIVCPTSLVSNWDDECIKWLKGKVRTMPICE 269
Query: 278 STRDDVVSGIDSFTD--PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
+ R DV+S ++ F + QV+IVSYETFR+H+ +F S DL+ICDEAHRLKN
Sbjct: 270 ANRADVISSMNRFLNYNGHDRAQVMIVSYETFRIHADRFDKPNSVDLIICDEAHRLKNGD 329
Query: 336 TLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
TLTN+ N L+EF++MVNF NPG+LG F + +E I+ GR
Sbjct: 330 TLTNKALGSVPCLRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTGGEFYKKFEKPILDGR 389
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
EP ATE++ L ER+ ELS VN+F+LRRTN +LS HLPPK++EVVCCKL+PLQ +Y
Sbjct: 390 EPDATEKQLALAQERNGELSELVNKFVLRRTNTILSKHLPPKVVEVVCCKLSPLQQMIYR 449
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI---KSGNPGTTGFEDCIR 493
HF+ K K + K + +LA IT LKKLCNHPKLI+D I K+ N G GFE C
Sbjct: 450 HFLSEKAAKTIAT--GKSAMVLAAITGLKKLCNHPKLIHDMISAAKTTNKGAAGFESCAD 507
Query: 494 FFPPEMFSGRSGSWTGGDG------AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
FF ++ + G W SGK VLARLL LR+ T DR+V++SNYTQ
Sbjct: 508 FFGDGLYDSGARGHGRERGGGGLPEGWELHSGKFAVLARLLAILRKETKDRVVIISNYTQ 567
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
TLDL LCR RYP+ RLDG+TSISKRQKLV FNDP+++ FVFLLSSKAGGCG+NLIG
Sbjct: 568 TLDLIQTLCRNNRYPFCRLDGSTSISKRQKLVKRFNDPAEDCFVFLLSSKAGGCGINLIG 627
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
GNRLVLFDPDWNPANDKQAAAR WRDGQKK+ ++YRFL+TG+IEEKV+QRQ+SKE LQ V
Sbjct: 628 GNRLVLFDPDWNPANDKQAAARCWRDGQKKKCYLYRFLATGSIEEKVFQRQLSKESLQNV 687
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDET 727
+ E T ++ +S E+LR LFT D S+ H+ C +C + +
Sbjct: 688 VNGEGTLEQSS----MSKEELRRLFTLDDGTVSDTHDCGGCDKCPSKN------------ 731
Query: 728 NSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAI 787
F GL G ++ E+Q +E DLN WGHH VPD I
Sbjct: 732 ------------------FEGLHGSADG-QTWEEQDDDAVETDLNTWGHHHRMDQVPDPI 772
Query: 788 LQASAGDEVTFVFTNQVDGKLVPIESKVSPKMQAT 822
++ +AGD+V+FVF+ QV+G I K PK AT
Sbjct: 773 MRRAAGDDVSFVFSLQVEG--CAIVDKEKPKEDAT 805
>gi|308807292|ref|XP_003080957.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri]
gi|116059418|emb|CAL55125.1| DNA repair protein RAD54-like (ISS), partial [Ostreococcus tauri]
Length = 816
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/816 (48%), Positives = 496/816 (60%), Gaps = 100/816 (12%)
Query: 48 SDEDRKSKNVDALVRGNLVV------------------KRQSLLPRVLSVTEGAAVCRKP 89
S + K N+ A+V G LVV KR PR G A CR
Sbjct: 25 SQAEVKRANIRAMVEGTLVVSVGAFADGLLVRDPRVVLKRAFKSPRWERRNGGDAKCRHR 84
Query: 90 FKPPCSNGYDNGND--QLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENF 147
+ D+G+D +L RRL AR+ FVPWGS + + P T +EE+
Sbjct: 85 ADETRAKSDDDGDDAPELVRRLAARRVFVPWGSKAS---DVAAAMPKPTTT----LEEHI 137
Query: 148 TLPPGVDPLVLWQPEEPQNDGG------------NLVPITVDPLLVRFLRPHQREGVQFM 195
LP G++ L LW P E + N PI VD +L R+LRPHQREGVQFM
Sbjct: 138 ELPEGIEDLTLWVPGEGERGESGEAVAATTTTHPNAKPIVVDRMLTRWLRPHQREGVQFM 197
Query: 196 FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLV 255
FECV GL + G GCILADDMGLGKTLQ I LL+TLL QGFDG P VK+A+IV PTSLV
Sbjct: 198 FECVMGLRDFDGT-GCILADDMGLGKTLQGITLLWTLLKQGFDGAPAVKRALIVCPTSLV 256
Query: 256 SNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
SNW+ E KW+ GRV+ + +C+STR +VVS I F P QV+IVSYETFR+HS +F+
Sbjct: 257 SNWDDECNKWLKGRVKTLPICDSTRAEVVSSIKMFLAPRHVAQVMIVSYETFRIHSERFN 316
Query: 316 CSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPG 356
+ DL++CDEAHRLKN +TLTN+ N L+EF+AMV+F NPG
Sbjct: 317 FDGAVDLIMCDEAHRLKNGETLTNKALCAVPCLRRVMLSGTPMQNHLDEFYAMVSFCNPG 376
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+LG + F + YE I+ GREP ATE+E + +++LS VN+FILRRTN +LS HLP
Sbjct: 377 LLGTPSEFSKKYERPILAGREPYATEKELERAQMANTDLSELVNKFILRRTNTILSKHLP 436
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
PK++EVVCCKL+PLQ LY HF+ SK +A++ K + +L I ALKKL NHPKLI+D
Sbjct: 437 PKVVEVVCCKLSPLQQALYEHFLTSKAATQALT--GKATAVLPAINALKKLVNHPKLIFD 494
Query: 477 TIK----SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG--AWVELSGKMHVLARLLGH 530
I +G+ GF C FF P M+ G + GG W E SGK VLARLL +
Sbjct: 495 MINGAKNTGSAAANGFNTCAEFFEPGMYGGGTSRRGGGRMCPGWEEHSGKFAVLARLLAN 554
Query: 531 LRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF 590
LR T DRIV++SNYTQTLDL AQ+C ER YP++RLDG T+I KRQKLV FNDP+ N F
Sbjct: 555 LRSETKDRIVIISNYTQTLDLIAQMCIERHYPFVRLDGGTTIGKRQKLVKEFNDPTSNSF 614
Query: 591 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 650
VFLLSSKAGGCG+NLIGGNRLVLFDPDWNPANDKQAAAR WRDGQKK+ ++YRFL+ GTI
Sbjct: 615 VFLLSSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARCWRDGQKKKCYLYRFLAAGTI 674
Query: 651 EEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
EEKV+QRQ+SKE LQ V+ S + +ST++LR LF+ S+ H+ C R
Sbjct: 675 EEKVFQRQLSKESLQNVVN----GSGELEQAVMSTDELRKLFSLDCTTCSDTHDTCGCKR 730
Query: 711 CQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEED 770
C + + E +E K E+Q+ E+
Sbjct: 731 CPKREGNDLMLDEDEE-----------------------------YKFWEEQIDEADEQK 761
Query: 771 LNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDG 806
L+ W HH VPD IL+ SAGD+V+FVF+ +V+G
Sbjct: 762 LDEWAHHHRIDKVPDDILKKSAGDDVSFVFSLKVEG 797
>gi|412993466|emb|CCO13977.1| DNA repair and recombination protein RAD54 [Bathycoccus prasinos]
Length = 1135
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/738 (49%), Positives = 461/738 (62%), Gaps = 57/738 (7%)
Query: 105 LARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEP 164
L R + ARK F+P+GS +++LPR + ++ E+ LP GV+ LVLWQ E+
Sbjct: 102 LQRAILARKIFIPFGSKL--------KVELPRIIPSDADAEDIVLPEGVEELVLWQDEDK 153
Query: 165 QNDGG--NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
+ + +L + VD +L R+LRPHQREGV F++ECV GL G GCILADDMGLGKT
Sbjct: 154 EREEAKSSLPAVKVDNMLTRWLRPHQREGVSFLYECVMGLRGFEGA-GCILADDMGLGKT 212
Query: 223 LQSIALLYTLLCQGF--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
LQ+IAL++TLL D KP VKK +IV PTSLV+NW+AE KW+ G+V+ +C +R
Sbjct: 213 LQAIALMWTLLNTSIEEDQKPTVKKVVIVCPTSLVANWDAECIKWLKGKVKTTPICGDSR 272
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
D S + F P S QVLIVSYETFR++ +F+ SC L+ICDEAHRLKN +TLTN+
Sbjct: 273 ADAESAVKMFLAPQSRSQVLIVSYETFRIYHERFTTESSCQLVICDEAHRLKNGETLTNQ 332
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
N L+EF++MV+F NPGILG F + YE I+ GREP AT
Sbjct: 333 ALAKMACKRRIMLSGTPMQNHLDEFYSMVSFCNPGILGTTKEFAKKYERPILAGREPYAT 392
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ E ER+ LS VN+FILRRTN +LS HLPPK+IE+VCCK TPLQ +Y H +
Sbjct: 393 DAELAKANERNEMLSVIVNKFILRRTNTILSKHLPPKVIEIVCCKTTPLQRSIYEHLLSE 452
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIK-----SGNPGTTGFEDCIRFFP 496
K R + KQ +LA ITALKKLCNHPKLI+D I+ G +D + +
Sbjct: 453 K--ARIAQKTGKQMDVLACITALKKLCNHPKLIFDAIREKKYAGKTDGGNAIDDNLTPYF 510
Query: 497 PEMFSGRSGSWTGGDG-----AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
++ G G G W GK VLARLL LR T DRIV++SNYTQTLDL
Sbjct: 511 HGLYDGGGSGRGGRAGGQMCEGWEWHGGKFAVLARLLHQLRTETSDRIVIISNYTQTLDL 570
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
LCR+ YP LRLDG TSI+KRQKLVN FND + NEF+FLLSSKAGGCG+NL+GGNRL
Sbjct: 571 VEILCRQNNYPSLRLDGGTSINKRQKLVNAFNDLTNNEFIFLLSSKAGGCGINLVGGNRL 630
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
VLFDPDWNPANDKQAAAR WRDGQKK+ + YRFLS+GTIEEKV+QRQ++K+ L V+
Sbjct: 631 VLFDPDWNPANDKQAAARCWRDGQKKKCYEYRFLSSGTIEEKVFQRQLAKQALTSVVDGR 690
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSAN 731
S + ++TEDL+ LF+ + S+ H CTRC D I E T N
Sbjct: 691 ---GSGLEQMSMTTEDLQQLFSLDVECPSDTHRTCDCTRCP---DVHRKIEENTTTTMMN 744
Query: 732 KNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQAS 791
+ S ++ + G ++ EKQL E LN W HH+ VPDA L+ +
Sbjct: 745 HSSISSED-------NAIGGGVNDPLPEEKQLEDFDEAKLNTWAHHYRMSHVPDAQLRKA 797
Query: 792 AGDEVTFVFTNQVDGKLV 809
AG++VTFVF+ +VDG +
Sbjct: 798 AGEDVTFVFSLEVDGARI 815
>gi|301122241|ref|XP_002908847.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
T30-4]
gi|262099609|gb|EEY57661.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
T30-4]
Length = 1076
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/852 (44%), Positives = 499/852 (58%), Gaps = 112/852 (13%)
Query: 27 ADYNDDNDDGDDEASAADSAPSDEDRKSKNVDALVRG-NLVVKRQSLLPRVLSVTEG-AA 84
A DD++D +E+ AA+ N AL G +L VKR L V+ E A
Sbjct: 25 AQPQDDDEDAYEESDAAN-----------NRQALRSGASLSVKRLPFLSFVVMEPERRAQ 73
Query: 85 VCRKPFKPPCSNGYDNGNDQLARRLCARKRF---VPWGS----------SRPVLVTITNR 131
R+PFK PC G G Q + RL K WGS PV V +
Sbjct: 74 RVRRPFKSPCGEG---GRSQESNRLLQTKTLGMRRRWGSLVLKPMVRHDMPPVEVDVEEI 130
Query: 132 LDLPRTVENNVIEENFTLPPGVD---PLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQ 188
V E P D PLVLWQ + + + + V ++ +FLRPHQ
Sbjct: 131 ETPIEPEPIAVEEPVPATAPVADAPPPLVLWQSKTDPD-----IKVVVPEIVGKFLRPHQ 185
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAII 248
REGVQFMF+CV + G GCILADDMGLGKTLQSI L+YTLL G D KP V +AI+
Sbjct: 186 REGVQFMFDCVCQVKGFDG-QGCILADDMGLGKTLQSITLMYTLLLTGMDMKPTVNRAIV 244
Query: 249 VTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTD------PCSSLQVLIV 302
V PTSLV NW+ EI KW+ GRV+ +AL E+ R+ V+ GI+ F + P S QVLI+
Sbjct: 245 VCPTSLVKNWDDEIIKWLHGRVKTVALFEAKRETVIKGINQFIEGSKRPRPGFSAQVLII 304
Query: 303 SYETFRMHSSKFSCSESC-DLLICDEAHRLKNDQTLTNR-------------------ND 342
SYETFRMH+ KF+ + +C DLLICDEAHRLKN + N+ ND
Sbjct: 305 SYETFRMHAQKFADTPACCDLLICDEAHRLKNANSQINKALSSLACRKRVLLSGTPMQND 364
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
LEEFFAMV+FTNP ILG + FR+ Y I+ GREP +T+ E+++ S+ L VNQF
Sbjct: 365 LEEFFAMVDFTNPNILGTPSEFRKNYLGPILIGREPDSTDRERQVAQSCSAMLCEIVNQF 424
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
ILRR N L + HLPPK+++V+CC L+PLQ +LYNHF+ S + + + + +L+ IT
Sbjct: 425 ILRRGNILNAKHLPPKLMQVICCPLSPLQDKLYNHFLSSSACRDMMKRSS--ANVLSSIT 482
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG---------- 512
ALKKLCNHP LI+D + N GF +C ++F S G GGD
Sbjct: 483 ALKKLCNHPLLIFDEMGKTNTKLPGFSNCAQYFTAAKSSKEGG---GGDSRHRRGGFGGR 539
Query: 513 -AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
+ E SGKM +L RL+ +R+ T DRIV+VSNYTQTLD+ + LC+ER P++RLDGTTS
Sbjct: 540 TCYPEWSGKMLLLDRLMFSMRKTTTDRIVIVSNYTQTLDVVSTLCQERHLPFVRLDGTTS 599
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
KR+KLV+ FN+P+ N F LLSSKAGGCGLNLIG NRLVLFDPDWNPA DKQAAARVW
Sbjct: 600 AKKRKKLVDTFNEPTTNSFALLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARVW 659
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
R+GQKK ++YRFL+TGT+EEK++QRQ+SKEGLQ ++ ++ + N LS++DL+ L
Sbjct: 660 REGQKKMCYVYRFLATGTLEEKIFQRQLSKEGLQNIVDDKE------EVNSLSSKDLKRL 713
Query: 692 FTFHDDVRSEIHENMHCTRCQNYDDGAESIGE---GDETNSANKNDQSDQEVT------- 741
F F D S+ H+ + C RCQ + E+ E N A D+++T
Sbjct: 714 FVFRKDTMSDTHDQLKCDRCQWRNTSNETSAEIAIDAAENEARNEISPDRDITSDEDVDQ 773
Query: 742 DIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQAS----AGDEVT 797
DI K Q+G P EEDLN+WGHH SV D ++Q + D V+
Sbjct: 774 DID------------KGYHPQIGMPPEEDLNSWGHHRSYASVDDEVMQTALQQVQNDLVS 821
Query: 798 FVFTNQVDGKLV 809
F F+ ++D +L+
Sbjct: 822 FAFSCRIDWELL 833
>gi|348676261|gb|EGZ16079.1| hypothetical protein PHYSODRAFT_560615 [Phytophthora sojae]
Length = 1087
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/844 (44%), Positives = 499/844 (59%), Gaps = 103/844 (12%)
Query: 34 DDGDDEASAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLP-RVLSVTEGAAVCRKPFKP 92
D+ +D AD+A + + +S G+L VKR L V+ A R+ FK
Sbjct: 33 DEDNDAYEDADAASNRQALRSG-------GSLSVKRLPFLSFLVMEPERRAQHVRRQFKS 85
Query: 93 PCSNGYDNGNDQLARRLCARKRF---VPWGSSRPVLVTITNRLDLPRTVENNVIEENFTL 149
PC G G Q + RL K WGS+ +V R DLP + E
Sbjct: 86 PCGEG---GRTQESNRLLQTKTLGMRRRWGSALKPMV----RHDLPPVEVDVEEVETLVE 138
Query: 150 PPGVDP----------------LVLWQPE-EPQNDGGNLVPITVDPLLVRFLRPHQREGV 192
P LVLWQ E +P+ + + V ++ +FLRPHQREGV
Sbjct: 139 PEPPAVEEAPVAAAPAAEAPPPLVLWQSETDPE------IKVVVPEIVGKFLRPHQREGV 192
Query: 193 QFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPT 252
QFMF+CV + G GCILADDMGLGKTLQSI L+YTLL G D +P VK+AI+V PT
Sbjct: 193 QFMFDCVCQVRGFDG-QGCILADDMGLGKTLQSITLMYTLLMTGMDMQPTVKRAIVVCPT 251
Query: 253 SLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTD------PCSSLQVLIVSYET 306
SLV NW+ EI KW+ GRV+ +AL E+ R+ V+ GI+ F + P S QVLI+SYET
Sbjct: 252 SLVKNWDDEIIKWLHGRVKTVALYEAKRETVIKGINQFIEGSKRPRPGFSAQVLIISYET 311
Query: 307 FRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
FRMH+ KF+ E C+LLICDEAHRLKN + N+ NDLEEF
Sbjct: 312 FRMHAQKFADTPECCELLICDEAHRLKNANSQINKALSSLACRKRVLLSGTPMQNDLEEF 371
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
FAMV+FTNP ILG + FR+ Y I+ GREP +T+ E+ + S+ L VNQFILRR
Sbjct: 372 FAMVDFTNPNILGTPSEFRKNYLGPILVGREPDSTDRERGVAQSCSAMLCEIVNQFILRR 431
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
N L + HLPPK+++V+CC L+PLQ +LY HF+ S + + ++ + +L+ ITALKK
Sbjct: 432 GNILNAKHLPPKLMQVICCPLSPLQEQLYMHFLSSSACRDMMKRQS--ANVLSSITALKK 489
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS--------WTGGDGAWVELS 518
LCNHP LI+D + N GF +C ++F S +G GG + E S
Sbjct: 490 LCNHPLLIFDEMGKTNTKLPGFSNCAQYFSAAKESRDTGGDNGLHRRGGFGGRTCYPEWS 549
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM +L RL+ +R+ T DRIV+VSNYTQTLD+ + LC+ER P++RLDGTTS KR+KL
Sbjct: 550 GKMLLLDRLMFAMRKTTTDRIVIVSNYTQTLDVVSTLCQERHLPFVRLDGTTSAKKRKKL 609
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V+ FNDP+ N F FLLSSKAGGCGLNLIG NRLVLFDPDWNPA DKQAAARVWR+GQKK
Sbjct: 610 VDTFNDPTTNSFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARVWREGQKKM 669
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV 698
++YRFL+TGT+EEK++QRQ+SKEGLQ ++ ++ + N LS++DL+ LF F D
Sbjct: 670 CYVYRFLATGTLEEKIFQRQLSKEGLQNIVDDKE------EVNSLSSKDLKRLFVFRKDT 723
Query: 699 RSEIHENMHCTRCQ--------NYDDGAESIGEGDETNSANKNDQS-DQEVTDIGGFAGL 749
S+ H+ + C RCQ +I + DE + N+ S D+ +D
Sbjct: 724 LSDTHDQLKCDRCQWRGDGDAGGDAASVITIDDDDENGKESGNETSPDRSTSDEDNDKDA 783
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQAS----AGDEVTFVFTNQVD 805
C H Q+G P EEDLN+WGHH SV D ++QA+ D V+F F+ ++D
Sbjct: 784 DKCYH------PQIGMPPEEDLNSWGHHRAYASVDDEVMQAALQQVQNDLVSFAFSCRID 837
Query: 806 GKLV 809
+L+
Sbjct: 838 WELL 841
>gi|302845062|ref|XP_002954070.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f.
nagariensis]
gi|300260569|gb|EFJ44787.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f.
nagariensis]
Length = 520
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/523 (62%), Positives = 388/523 (74%), Gaps = 32/523 (6%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ VDP+LVRFLRPHQREGVQFMF+CV+G G GCILADDMGLGKTLQ I LL+TLL
Sbjct: 2 VVVDPMLVRFLRPHQREGVQFMFDCVTGQ-RLEGKQGCILADDMGLGKTLQGITLLWTLL 60
Query: 234 CQG---FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
G G P+ ++AIIV PTSLVSNW+ E KW+ GR++ +A+CESTR+DVV+ I F
Sbjct: 61 TSGHSLLGGCPIARRAIIVCPTSLVSNWDNECTKWLQGRLKTLAMCESTREDVVANIGMF 120
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------- 340
P + +VLI+SYETFRMH+ + SCDLL+CDEAHRLKND TLTNR
Sbjct: 121 LHPSNVYKVLIISYETFRMHAERLQVPGSCDLLVCDEAHRLKNDATLTNRALDNLPCKRR 180
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
N L+EFFAMV+F NPG+LG FR+YYE I+ GREP A E+ LG ER
Sbjct: 181 VLLSGTPMQNHLDEFFAMVDFCNPGVLGAPTQFRKYYELPILAGREPDAAPEQVVLGEER 240
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
S ELS N FILRRTN LLS HLPPK+IEVVCC+LT LQ +LY+HF+ SK +R ++
Sbjct: 241 SRELSGLTNNFILRRTNKLLSQHLPPKVIEVVCCRLTELQRQLYHHFLQSKAARRVLNGR 300
Query: 452 TKQSKILAYITALKKLCNHPKLIYDTI-KSGNPGTTGFEDCIR----FFPPEMF-SGRSG 505
T S +L+ IT+LKKLCNHPKLIYD + + +PG C+ FPP +F +GR G
Sbjct: 301 T--SGVLSAITSLKKLCNHPKLIYDAVHRRFSPGHVRSCSCLSDVGSLFPPGLFDNGRVG 358
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
G W LSGKM VLAR+L L T DRIVLVSNYT +LDLFAQLCRER YP++R
Sbjct: 359 R-GGMAAGWETLSGKMAVLARMLHVLYTETHDRIVLVSNYTSSLDLFAQLCRERGYPFVR 417
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDGTT+I+KRQKLV FNDP++ +F FLLSSKAGGCGLNLIG NRLVLFDPDWNPAND+Q
Sbjct: 418 LDGTTTINKRQKLVKVFNDPAERQFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDQQ 477
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
AAARVWRDGQ+KRVF+YRFLSTG+IEEKVYQRQ+SKEGL++++
Sbjct: 478 AAARVWRDGQRKRVFVYRFLSTGSIEEKVYQRQLSKEGLKQLV 520
>gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus
siliculosus]
Length = 1510
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 342/733 (46%), Positives = 456/733 (62%), Gaps = 80/733 (10%)
Query: 50 EDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRL 109
++ K N AL +G++ V R LL L+V G + FK P + + L RR
Sbjct: 60 QEMKRVNTAALRQGSVSVVRAPLLG-CLTVPRGGGLVVGAFKLPGGARRTDESKGLLRRK 118
Query: 110 CARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVD-------------PL 156
G RPV +++ P + V E F L G D PL
Sbjct: 119 SL-------GVRRPVTFMTSSKFRPPSPPDAAVSGE-FDLQEGEDEGDGKGAEADTFEPL 170
Query: 157 VLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADD 216
VLW+ E P D I+VDP L +FLRPHQREGVQFMFECV G+ G GCILADD
Sbjct: 171 VLWE-EGPGEDDHR---ISVDPRLCKFLRPHQREGVQFMFECVMGMREFEG-SGCILADD 225
Query: 217 MGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL 275
MGLGKTLQSIA+L+TLL QG G+P V++A++V PTSLV NWEAEI KW+ G ++IAL
Sbjct: 226 MGLGKTLQSIAVLWTLLKQGKAKGQPAVRRAVVVCPTSLVKNWEAEIDKWLKGDCRVIAL 285
Query: 276 CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKF--SCSESCDLLICDEAHRLKN 333
E+TR+ VV I+ F +VLIVSYETFR+HS +F CDLLICDEAHRLKN
Sbjct: 286 SETTREQVVQSINLFL-ASMVYRVLIVSYETFRLHSKRFYAKADTCCDLLICDEAHRLKN 344
Query: 334 DQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
+T TN+ NDLEEF+AM +FTNPG+LG + FR+ + + I+
Sbjct: 345 AETATNQALSALKCRKRVLLSGTPMQNDLEEFYAMTDFTNPGVLGSGSSFRKKFLSPILA 404
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL 434
GREP+AT+++ + + +E+S VN+FILRRTN + + HLPPK+++VVCC+LTP+Q+++
Sbjct: 405 GREPSATDKQVERAQKCQNEMSTVVNEFILRRTNNINAKHLPPKLVQVVCCRLTPVQTKI 464
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRF 494
Y H + SK ++ ++ KQ+ IL+ I A++KLCNHPKL+ + + G+ +
Sbjct: 465 YKHLLSSKEIRHILN--GKQTNILSSIGAMQKLCNHPKLLVEGAAGRDSGS--HAEIASM 520
Query: 495 FPPEMFSGRSGSWTGG-------------------DGAWVELSGKMHVLARLLGHLRQRT 535
P E S + + G G + E SGKM L RL+ +R
Sbjct: 521 LPAETSSSSALAEGVGGRGMSGGGGFGRRSSGGMQKGVFPEWSGKMETLFRLMREMRNTG 580
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLS 595
DDRIV+VSN+T +LDL +CRE +P++RLDG+T +SKRQK+VN FN+P F FLLS
Sbjct: 581 DDRIVVVSNFTSSLDLIGSMCRENSWPFVRLDGSTGVSKRQKMVNAFNEPGPQSFAFLLS 640
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCGLNLIGGNRLVLFDPDWNPA DKQAAARVWRDGQKKR F+YRF+STGTIEEKV+
Sbjct: 641 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVF 700
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
QRQ+SKEGLQ ++ ++ + N LS++DL+DLF ++ S+ H+ + C RC N D
Sbjct: 701 QRQLSKEGLQNIVDDKE------EVNSLSSKDLKDLFKLYEGTPSDTHDKLRCKRC-NID 753
Query: 716 DGAESIGEGDETN 728
+ +++ + DE
Sbjct: 754 EAVQAVKDIDEAG 766
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 760 EKQLGTPLEEDLNNWGHHFYSMSVPDAILQAS---AGDE-VTFVFTNQVDGKLVPIE 812
++Q+G P EEDLN+W HH+ + + D + + + GD V+FVF +V L+ ++
Sbjct: 999 QEQMGMPKEEDLNSWSHHYSTDTADDPVFRGAMMGTGDSLVSFVFGLEVTWDLLSVQ 1055
>gi|159489044|ref|XP_001702507.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280529|gb|EDP06286.1| predicted protein [Chlamydomonas reinhardtii]
Length = 533
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 324/551 (58%), Positives = 387/551 (70%), Gaps = 43/551 (7%)
Query: 179 LLVRFLRPHQREGVQFMFECVSG-LLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGF 237
+L RFLRPHQREGVQFMF+CV+G L GCILADDMGLGKTLQ I LL+TLL G
Sbjct: 1 MLTRFLRPHQREGVQFMFDCVTGQRLEGKHGAGCILADDMGLGKTLQGITLLWTLLGGGH 60
Query: 238 DGK---PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC 294
P+ ++AIIV PTSLVSNW+ E KW+ GR+ +A+CES+R+DV S I F D
Sbjct: 61 PLLGGVPLARRAIIVCPTSLVSNWDNECSKWLKGRLTTLAMCESSREDVCSSIALFLDSS 120
Query: 295 SS--LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------ 340
++ +VLI+SYETFRMH+ KF +CDLL+CDEAHRLKND TLTNR
Sbjct: 121 NTGLHRVLIISYETFRMHADKFQVPHACDLLMCDEAHRLKNDATLTNRALDNMPCKRRVL 180
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N L+EFFAMV+F NPG+LG AA FRR YE I+ GREP AT E+ LG ERS+
Sbjct: 181 LSGTPMQNHLDEFFAMVDFCNPGVLGSAAEFRRRYEAPILAGREPDATPEQVALGEERSA 240
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
ELS N+FILRRTN LLS HLPPK+IEVVCC+LT LQ LY HF+ SK +R ++
Sbjct: 241 ELSGLTNRFILRRTNKLLSQHLPPKVIEVVCCRLTELQRALYIHFLQSKAARRVLNAGKT 300
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
S +L+ IT+LKKLCNHPKLIYD + G G E I F G G
Sbjct: 301 TSGVLSAITSLKKLCNHPKLIYDAAAAAAAGEDG-EGKIEGFEVGPAEGAVG-------- 351
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
GKM VLAR+L L T DRIVLVSNYT TLDLF LCRER YP++RLDGTT+I+
Sbjct: 352 -----GKMAVLARMLHVLYTETTDRIVLVSNYTSTLDLFVALCRERGYPFVRLDGTTTIN 406
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
KRQKLV FNDP + +F FLLSSKAGGCGLNLIG NRLVLFDPDWNPAND QAAARVWRD
Sbjct: 407 KRQKLVKVFNDPVEKQFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDAQAAARVWRD 466
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
GQ+KRVF+YRFLSTG+IEEKV+QRQMSKEGL++++ + + N +++EDLR+LF+
Sbjct: 467 GQRKRVFVYRFLSTGSIEEKVFQRQMSKEGLKQLVGK----TGKAAANVMTSEDLRELFS 522
Query: 694 FHDDVRSEIHE 704
+ D S+ +E
Sbjct: 523 LNADSPSDTYE 533
>gi|384252522|gb|EIE25998.1| hypothetical protein COCSUDRAFT_40188 [Coccomyxa subellipsoidea
C-169]
Length = 1034
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 367/827 (44%), Positives = 455/827 (55%), Gaps = 188/827 (22%)
Query: 65 LVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPV 124
L V+R++LLP++L V A R FK P N +
Sbjct: 139 LQVQRKALLPKILDVNNAEATLRSAFKSPFPNAPARSD---------------------- 176
Query: 125 LVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFL 184
+E EE LVLW+P P DG P+ VD +L ++L
Sbjct: 177 -------------MEAEDPEER---------LVLWEPP-PYADGS---PVAVDGMLTKWL 210
Query: 185 RPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG---FDGKP 241
RPHQREGV FMFECV+GL + G +GCILADDMGLGKTLQ I+LL+TLL G G+P
Sbjct: 211 RPHQREGVAFMFECVTGLRDFGG-NGCILADDMGLGKTLQGISLLWTLLQSGHALLGGEP 269
Query: 242 MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLI 301
+ K+ II PTSLVSNW++E KW+ GRV+ + L ES+RDDV+S I F P + QVLI
Sbjct: 270 LAKRVIICCPTSLVSNWDSECGKWLKGRVRTLPLSESSRDDVISSISDFLRPNTMYQVLI 329
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------ND 342
+SYETFR+H+ + +CDLLICDEAHRLKNDQTL N+ N
Sbjct: 330 LSYETFRLHAERLKGEHACDLLICDEAHRLKNDQTLINKALDSLACKRRVLLSGTPMQNH 389
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L+EF+AMVNF NPG+LG + FRR+YE I+ GREP A+EE G ERSSELSA V
Sbjct: 390 LDEFYAMVNFCNPGVLGTPSQFRRHYEGPIVAGREPDASEEVVAKGAERSSELSAIV--- 446
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAY 460
+EVVCC+ +PLQ ELYNHF+ S +R +S E + K L
Sbjct: 447 -----------------VEVVCCRPSPLQVELYNHFLASNAAQRVLSAEKTKGKASALTA 489
Query: 461 ITALKKLCNHPKLIYDTI--KSGNP---------------------GTTGFEDCIRFFPP 497
I AL+KLC HPKLIYD I SG T +DC +FFPP
Sbjct: 490 INALRKLCGHPKLIYDLIHPTSGKAPAEADGFKASRVIIPFCMADLWTEARKDCAQFFPP 549
Query: 498 EMFS-GRSG--------SW---TGGDGAWVEL-----------SGKMHVLARLLGHLRQR 534
+F GR+G W +G G L +GKM VL +L LR
Sbjct: 550 GLFDDGRAGRSRGILPQGWDALSGTSGRPFSLCCLSLCTGKFPAGKMAVLGCMLALLRP- 608
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLL 594
T +RIV+VSN TQ LDL QLCRER YP LRLDGTT++ KR K+V FN +FVFLL
Sbjct: 609 TGERIVVVSNSTQVLDLIGQLCRERSYPALRLDGTTTLKKRAKMVQQFNT-ELGQFVFLL 667
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
SSKAGGCG+NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV++Y+FL+TGTIEEKV
Sbjct: 668 SSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYKFLTTGTIEEKV 727
Query: 655 YQRQMSKEGLQKVIQQ-----------EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
+QRQ++KEGLQ+V+ + D +S EDLRDLFT S+
Sbjct: 728 FQRQLAKEGLQQVVNNTGAAASASAGSDAGDGGGIAAAAMSAEDLRDLFTLRLHTASDTF 787
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQL 763
++M C + E EG SA D +
Sbjct: 788 DSM-CDNDDDEAPDDEGSNEG----SAAAVD----------------------------I 814
Query: 764 GTPLEEDLNNWGHHFYSMSVPDAILQASAGD---EVTFVFTNQVDGK 807
G+P EEDL +WG H + +VPDAI+ +V+FVF+ +V GK
Sbjct: 815 GSPAEEDLKSWGQHTSTSTVPDAIMHTIGQQLPGQVSFVFSCKVAGK 861
>gi|325190695|emb|CCA25191.1| DNA repair and recombination protein RAD54 putative [Albugo
laibachii Nc14]
Length = 910
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 337/787 (42%), Positives = 469/787 (59%), Gaps = 99/787 (12%)
Query: 88 KPFKPPCSNGYDNGNDQLA--RRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEE 145
+PF+ P + +++L+ + L R+R V S + D +E +I++
Sbjct: 66 QPFRNPWKHSRSTESERLSNIKTLGVRRRLVSIHSGPIQNCDLQIETDYVEPLEPAIIQQ 125
Query: 146 NFTLPPGV-----DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVS 200
+ P + +PL+LWQ EE + + V +L +FLRPHQR+GVQF+F+CV+
Sbjct: 126 LEEIEPEIQKPSFEPLILWQHEEEKERR-----VVVPDILTKFLRPHQRDGVQFLFDCVA 180
Query: 201 GLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFD--GKPMVKKAIIVTPTSLVSNW 258
+ NA G GCILADDMGLGKTLQSI L++TLL KP + + IIV PTSLV NW
Sbjct: 181 DVENA-GRFGCILADDMGLGKTLQSITLMHTLLETSMQDPTKPTIHRVIIVCPTSLVKNW 239
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTD----------PCSSLQVLIVSYETFR 308
EI+KW+ R++ IAL ES R+ V+ I F D P SS +VLI+SYETFR
Sbjct: 240 NDEIQKWLQNRIKTIALFESNREHVIKEIYRFIDSSCHPHHRTSPTSS-KVLILSYETFR 298
Query: 309 MHSSKF-SCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFA 348
MH++KF S + CDLLICDEAHRLKN + NR NDLEEF+A
Sbjct: 299 MHAAKFHSTPKCCDLLICDEAHRLKNSHSQINRALAALACRRRVLLSGTPMQNDLEEFYA 358
Query: 349 MVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTN 408
MV+FTNP ILG A FR+ + I+ GREP AT++E+ L S L VNQFILRR N
Sbjct: 359 MVDFTNPDILGTPAKFRKQFMGPILRGREPDATDKEQSLAQGCSWTLCNIVNQFILRRGN 418
Query: 409 ALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLC 468
L + HLPPK+++V+CC L+ LQ +LY F+ SK ++ + ++ +L ITALKKLC
Sbjct: 419 TLNAKHLPPKLMQVICCPLSSLQEKLYKRFLESKAMRNIMKQQN--VNVLPSITALKKLC 476
Query: 469 NHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE---------LSG 519
NHP L++ + GFEDC + E + ++T G A+ SG
Sbjct: 477 NHPLLLFKDDGTALLKLPGFEDCQQIIASE----QKNNFTSGQRAFSTNQKQTCHPGWSG 532
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
K+ +L L+ +R+ T +RIV+VSNYTQTLDL + LC ER +P++RLDGT S KRQ++V
Sbjct: 533 KLQLLDHLMQMMRKETKERIVVVSNYTQTLDLVSLLCSERNWPFVRLDGTISPKKRQQMV 592
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ FNDP+ + F FLLSSKAGGCGLNLIG NRLVLFDPDWNPA DKQAAARVWR+GQK+
Sbjct: 593 DVFNDPTTHSFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARVWREGQKQMC 652
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
++YRFL+TG++EEK++QRQ+SKEGLQ ++ + + N LS++DL+ LF +
Sbjct: 653 YVYRFLATGSLEEKIFQRQLSKEGLQSIVDDKD------EVNSLSSKDLKKLFVLQEATE 706
Query: 700 SEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSS 759
S+ H+ + CTRC+ + E D + + N + ++ +++ H+ +
Sbjct: 707 SDTHDRLRCTRCK------WRLQENDIDSMRSPNAELNEAISE-------TPLSHEYFHA 753
Query: 760 EKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGD-----------------EVTFVFTN 802
Q+G P EEDLNNWGHH SV D I+Q + ++F F+
Sbjct: 754 --QIGLPREEDLNNWGHHRCYDSVDDEIMQKAMRQLQLSPDWKLQSREKSKVPISFAFSC 811
Query: 803 QVDGKLV 809
++D +L+
Sbjct: 812 RIDSELL 818
>gi|209880656|ref|XP_002141767.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
gi|209557373|gb|EEA07418.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
Length = 851
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 333/765 (43%), Positives = 445/765 (58%), Gaps = 105/765 (13%)
Query: 76 VLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLP 135
+L+V G + +PFK P S G+ G+ ++R+ R +P S ++ I N P
Sbjct: 36 MLNVDSGKPITLRPFKSPMS-GHIPGSSVESQRMTLGCR-IPRDSLYGNVLKIPNFKLSP 93
Query: 136 RTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFM 195
+ E+ L +D L+LW+P+E NDG + I VD +L ++LR HQR GV+FM
Sbjct: 94 KIGEDLPALSEHAL---IDRLILWEPKE--NDGTH--KIEVDNILTKWLREHQRSGVKFM 146
Query: 196 FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLV 255
FEC+ GL G HGCILADDMGLGKTLQSI +L+TLL QGFDGKP V+KA++V P SLV
Sbjct: 147 FECLMGLRAFEG-HGCILADDMGLGKTLQSITILWTLLNQGFDGKPAVRKAVVVCPASLV 205
Query: 256 SNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
NW EI+KW+ G+ A+ E R+ V+S F S +VLI SYETFRMH+S
Sbjct: 206 KNWAYEIEKWLLGKCPCTAVAEKDREKVISMFAGFKYDRVS-RVLIASYETFRMHASNLD 264
Query: 316 CSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPG 356
DL+ICDEAHRLKND+T T+ +NDL EF+++V+ NP
Sbjct: 265 -GVPIDLIICDEAHRLKNDKTKTSIAINNLPAKKRLLLSGTPIQNDLIEFYSLVSLANPQ 323
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
LGD + FR+ Y I+ GREP ATE ++ L +R ELS N FILRR N LL+ LP
Sbjct: 324 ALGDVSTFRKIYANPILEGREPDATEYQQDLAAQRLQELSNITNLFILRRANTLLAKVLP 383
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK---------QSKILAYITALKKL 467
PKII + C+LTP QS LY F+ S ++ + ET ++L+ I +L KL
Sbjct: 384 PKIILNIFCRLTPFQSYLYKKFLRSAACRKMLDTETSCGNSRPIGLTGQVLSSIQSLMKL 443
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT-GGDGAWV----------- 515
CNHP LI KS GFE C ++ +S S+T GG G+ V
Sbjct: 444 CNHPSLIKP--KSSGSYGRGFEGCEKYLE----QAQSKSYTSGGFGSGVLSRRKVGNNRS 497
Query: 516 ------ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
++SGK+++L+RLL +R+ TDDR+VLVSNYTQTLD+F +LCR+ + P +RLDG+
Sbjct: 498 AYESRPDISGKLYLLSRLLFQIRRSTDDRVVLVSNYTQTLDVFERLCRDLQVPCVRLDGS 557
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
TSI+KR +V FNDP+ N F FLLSSKAGGCG+NLIG NRLV+FDPDWNPANDKQA AR
Sbjct: 558 TSITKRHSMVKIFNDPNSNSFAFLLSSKAGGCGINLIGANRLVMFDPDWNPANDKQALAR 617
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYRF STGTIEEK+YQRQ+ K+GL ++ D+ +S + +R
Sbjct: 618 VWRDGQKKNCYIYRFFSTGTIEEKIYQRQLCKDGLSAMLVTTSGDNQLKDA--ISADLVR 675
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
DLF ++ S+ HE + C+RC N Q++ +
Sbjct: 676 DLFVLREETISDTHEMIQCSRCYT-------------------NGQTNYMI--------- 707
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGD 794
QL E++LN W H+ + VPD +L + +
Sbjct: 708 -----------PQLEELEEDNLNTWAHYHDVLQVPDEVLAETLAE 741
>gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502]
gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis]
Length = 877
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/788 (42%), Positives = 441/788 (55%), Gaps = 130/788 (16%)
Query: 61 VRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGS 120
VR + +S + +LSV G V + F+ P S VP S
Sbjct: 21 VRQTEIALIRSPIMSMLSVESGKPVMFQSFRSPMSG------------------HVPGVS 62
Query: 121 SRPVLVTITNRLDLPRTVENNVIEENFTLPPGVD---------------PLVLWQPEEPQ 165
+T+ R+ T N++ + F LPP D PL+LW E
Sbjct: 63 LESRKMTLGVRIPRDSTYCNSIKQPGFKLPPKADDGSPKGEPEPQVNINPLILWISSE-- 120
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
DG V I VD +L ++LR HQR+GV F+FEC+ GL + G +GCILADDMGLGKTLQS
Sbjct: 121 -DGEKRV-IEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDG-NGCILADDMGLGKTLQS 177
Query: 226 IALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
I +L+TLL QGFDGKP V+KA++V P SLV NW +EI+KW+ G+ + + E R+ VVS
Sbjct: 178 ITILWTLLNQGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKCTPVAERDREKVVS 237
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
F S ++LI SYETFRMH + DL+ICDEAHRLKND+T T
Sbjct: 238 AFAGFKYDTMS-RILIASYETFRMHVEQLD-GVPIDLVICDEAHRLKNDKTKTAMAINNL 295
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL EF+++V+ NP +LGD + F++ Y I+ GREP A+E +++
Sbjct: 296 PAKKRLLLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYANPILEGREPDASEYQQE 355
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
L +R ELS N FILRR N LL+ LPPKII + C LTP+Q+ LY F+ S K+
Sbjct: 356 LATQRLQELSNITNHFILRRANTLLAKVLPPKIILNIFCNLTPIQNYLYRRFLRSSACKK 415
Query: 447 AISEETK------QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF 500
+ ++ ++L+ I +L KLCNHP LI SG G GFE ++ EM
Sbjct: 416 LLDSDSTGNPTGLTGQVLSSIQSLMKLCNHPTLIRPKT-SGGYGK-GFEGSEKYL--EMI 471
Query: 501 SGRSGSW-TGGD-------GAWVE------------LSGKMHVLARLLGHLRQRTDDRIV 540
GRS S +GG+ G+ + LSGK+++L+RLL H+R T DR+V
Sbjct: 472 HGRSASGESGGEYKKRVTVGSSIRNSNRTGFSSKPNLSGKLYLLSRLLFHIRSNTKDRVV 531
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
LVSNYTQTLD+F LCR+ + P +RLDG+TSI++R LV FNDP+ N F FLLSSKAGG
Sbjct: 532 LVSNYTQTLDVFECLCRDLQVPCVRLDGSTSITRRHNLVKTFNDPNSNSFAFLLSSKAGG 591
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
CG+NLIG NRLV+FDPDWNPANDKQA ARVWRDGQKK +IYR STGTIEEK+YQRQ+
Sbjct: 592 CGINLIGANRLVMFDPDWNPANDKQALARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQLC 651
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
K+GL ++ ++ +S + +RDLFT +D S+ H+ + C RC
Sbjct: 652 KDGLSAMLVTSGGNNELKDS--ISADLVRDLFTLKEDTISDTHDMIQCNRCH-------- 701
Query: 721 IGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYS 780
D S Q + + G LE+DLN WGH+
Sbjct: 702 -------------DSSGQPLDMVPQTTG------------------LEDDLNTWGHYHSF 730
Query: 781 MSVPDAIL 788
+PD IL
Sbjct: 731 SEIPDEIL 738
>gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
Length = 877
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/788 (41%), Positives = 441/788 (55%), Gaps = 130/788 (16%)
Query: 61 VRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGS 120
VR + +S + +LSV G V + F+ P S VP S
Sbjct: 21 VRQTEIALIRSPIMSMLSVESGKPVMFQSFRSPMSG------------------HVPGVS 62
Query: 121 SRPVLVTITNRLDLPRTVENNVIEENFTLPP---------------GVDPLVLWQPEEPQ 165
+T+ R+ T N++ + F LPP V+PL+LW E
Sbjct: 63 LESRKMTLGVRIPRDSTYCNSIKQPGFKLPPKADDSSPKGEPEPQVNVNPLILWISSE-- 120
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
DG V I VD +L ++LR HQR+GV F+FEC+ GL + G +GCILADDMGLGKTLQS
Sbjct: 121 -DGEKRV-IEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDG-NGCILADDMGLGKTLQS 177
Query: 226 IALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
I +L+TLL QGFDGKP V+KA++V P SLV NW +EI+KW+ G+ + + E R+ VVS
Sbjct: 178 ITILWTLLNQGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKCTPVAERDREKVVS 237
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
F S ++LI SYETFRMH + DL+ICDEAHRLKND+T T
Sbjct: 238 AFAGFKYDTMS-RILIASYETFRMHVEQLD-GVPIDLVICDEAHRLKNDKTKTAMAINNL 295
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL EF+++V+ NP +LGD + F++ Y I+ GREP A+E +++
Sbjct: 296 PAKKRLLLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYANPILEGREPDASEYQQE 355
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
L +R ELS N FILRR N LL+ LPPKII + C LTP+Q+ LY F+ S K+
Sbjct: 356 LATQRLQELSNITNHFILRRANTLLAKVLPPKIILNIFCNLTPIQNYLYRRFLRSSACKK 415
Query: 447 AISEETK------QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF 500
+ ++ ++L+ I +L KLCNHP LI G GFE ++ EM
Sbjct: 416 LLDSDSTGNPTGLTGQVLSSIQSLMKLCNHPTLIRPKTSGGY--GKGFEGSEKYL--EMI 471
Query: 501 SGRSGSW-TGGD-------GAWVE------------LSGKMHVLARLLGHLRQRTDDRIV 540
GRS S +GG+ G+ + LSGK+++L+RLL H+R T DR+V
Sbjct: 472 HGRSVSGESGGEYKKRVTIGSSIRNSNRTGFSSKPNLSGKLYLLSRLLFHIRSNTKDRVV 531
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
LVSNYTQTLD+F LCR+ + P +RLDG+TSI++R LV FNDP+ N F FLLSSKAGG
Sbjct: 532 LVSNYTQTLDVFECLCRDLQVPCVRLDGSTSITRRHNLVKTFNDPNSNSFAFLLSSKAGG 591
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
CG+NLIG NRLV+FDPDWNPANDKQA ARVWRDGQKK +IYR STGTIEEK+YQRQ+
Sbjct: 592 CGINLIGANRLVMFDPDWNPANDKQALARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQLC 651
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
K+GL ++ ++ +S + +RDLFT +D S+ H+ + C RC +D +
Sbjct: 652 KDGLSAMLVTSGGNNELKDS--ISADLVRDLFTLKEDTISDTHDMIQCNRC--HDSNGQP 707
Query: 721 IGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYS 780
+ +T T LE+DLN WGH+
Sbjct: 708 LDMVPQT-------------------------------------TGLEDDLNTWGHYHSF 730
Query: 781 MSVPDAIL 788
+PD IL
Sbjct: 731 SEIPDEIL 738
>gi|156086958|ref|XP_001610886.1| DNA repair and recombination protein RAD54-like [Babesia bovis
T2Bo]
gi|154798139|gb|EDO07318.1| DNA repair and recombination protein RAD54-like , putative [Babesia
bovis]
Length = 824
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 344/811 (42%), Positives = 457/811 (56%), Gaps = 110/811 (13%)
Query: 76 VLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLP 135
+L V G +PFK P G+ G +LA+R R G RP+ N L P
Sbjct: 42 MLHVDSGPVTVFQPFKSPVE-GHLPGVSELAKRKTLGCRIRNLG--RPL-----NLLHSP 93
Query: 136 RTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFM 195
++ +LPP V+PLVL+ E D V I VDP+L RFLR HQR+GVQF+
Sbjct: 94 VGAAKPTEADDSSLPP-VNPLVLYTSPE---DAEVQVKIEVDPMLSRFLRDHQRQGVQFV 149
Query: 196 FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLV 255
F+C+ GL G GCILADDMGLGKTLQSI +++TLL G +GKP +K IV P SLV
Sbjct: 150 FDCLMGLKEFNG-QGCILADDMGLGKTLQSITVMWTLLNNGLNGKPAARKCAIVCPASLV 208
Query: 256 SNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
+NWE+EIKKW+ G+ A+ E ++ VVS F S V+I SYETFR+H+ K
Sbjct: 209 NNWESEIKKWLKGKCPCTAVAEGVKEKVVSKFTGFKYDRQS-NVIISSYETFRLHAKKLE 267
Query: 316 CSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPG 356
DL+ICDEAHRLKND+TLT+ +NDL EF+A+V+ NP
Sbjct: 268 -GVPIDLVICDEAHRLKNDKTLTSVAIQNLPAKMRLMLSGTPIQNDLNEFYALVSLCNPN 326
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+LGD + FR++Y I+ GREP AT+ ++++ ER ++LS NQF+LRRTN LLS LP
Sbjct: 327 VLGDISNFRKHYANPILLGREPDATKAQQEIAAERLADLSYITNQFVLRRTNTLLSKVLP 386
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI-SEETKQSKILAYITALKKLCNHPKLIY 475
PKI V C LT Q +Y + +S + ++ I S E +K L I +L K+CNHP LI
Sbjct: 387 PKINMNVFCNLTETQKIIYTSYTNSASCRKLINSGEVVMTKSLGVILSLMKVCNHPGLIK 446
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
S + T ++ I+ + + ELS K VL RLL ++R+ T
Sbjct: 447 ---PSPSKKPTKADELIK-----EIHANYNTLQKNRSCYPELSAKTLVLFRLLHNIRRTT 498
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLS 595
DRIV++SNYTQTLD+F ++C++ YP +RLDGT SI KR KLV FNDP+ + F FLLS
Sbjct: 499 SDRIVIISNYTQTLDVFERMCKQCNYPCVRLDGTLSIKKRHKLVTTFNDPNSHSFAFLLS 558
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCG+NLIG NRLVLFDPDWNPANDKQA ARVWRDGQ+K +IYRF STGTIEEK+Y
Sbjct: 559 SKAGGCGINLIGANRLVLFDPDWNPANDKQALARVWRDGQRKTCYIYRFFSTGTIEEKIY 618
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
QRQ+ K+GL ++ TD + LS E LR+LF F +D S+ H+++ CTRC
Sbjct: 619 QRQICKDGLSAML---VTDGENEIKDSLSGEYLRNLFEFKEDTISDTHDSLSCTRCN--- 672
Query: 716 DGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWG 775
E+ G +T F +E+DL W
Sbjct: 673 ---ETTGHVPQT----------------ADF--------------------VEDDLLTWA 693
Query: 776 HHFYSMSVPDAILQASA--------GDE----VTFVFTNQVDGK--------LVPIESKV 815
HH ++PD L+++ DE V+FV + V+ K V E V
Sbjct: 694 HHTDLNTLPDPCLKSAIFENNPPVQTDEGYTPVSFVMSCLVEFKESQTPQQRPVNTEPAV 753
Query: 816 SPK-MQATEGNKNPNNHITNPKPKLDQRSKL 845
P+ ++ + +N N TN K K Q+ K+
Sbjct: 754 KPQPLKESNSQENKRNATTNNK-KASQKRKI 783
>gi|428179712|gb|EKX48582.1| hypothetical protein GUITHDRAFT_68686, partial [Guillardia theta
CCMP2712]
Length = 524
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 289/530 (54%), Positives = 360/530 (67%), Gaps = 64/530 (12%)
Query: 182 RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKP 241
RFLR HQR+GVQFMFECV+GL N G +GC+LADDMGLGKT QS+ LL+TLL QG +GKP
Sbjct: 1 RFLREHQRQGVQFMFECVTGLRNFGG-YGCVLADDMGLGKTFQSVTLLWTLLTQGIEGKP 59
Query: 242 MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQ--LIALCESTRDDVVSGIDSFTDPCSSLQ- 298
+ +A ++ PTSLV NW EI KW+G R+ ++AL ES R+DV+ I+ +T +
Sbjct: 60 TITRAAVICPTSLVKNWANEITKWLGDRLDGGVLALSESAREDVIDAINRYTRKGIYQRE 119
Query: 299 -----VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------- 340
VLI+SYETFR+H+ +F C S AHRLKND+T+TN+
Sbjct: 120 RKFPPVLIISYETFRIHAGRFHCHTSAICCKWTRAHRLKNDKTITNKALASLPCLRRVLL 179
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
NDLEEFFAMV+FTNPG+LG AA FR+ Y++ I+ GREP ATE +++ G E
Sbjct: 180 SGTPMQNDLEEFFAMVDFTNPGVLGTAAQFRKMYQSPILTGREPDATESQREKGNEAQGA 239
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
LS VN FILRRTN LLS HLPPK++++VCCKL+PLQ +LY SK+V R K
Sbjct: 240 LSNLVNIFILRRTNELLSKHLPPKVVQLVCCKLSPLQIQLYRAISSSKDVMRMCKGTGKT 299
Query: 455 SK-ILAYITALKKLCNHPKLIYDTIKSGN--PGTTGFEDCIRFFPPEMFSGRSGSWTGGD 511
+K +LA IT+LKKLCNHPKLI+D I++ P + + E+ S R G
Sbjct: 300 TKQVLACITSLKKLCNHPKLIFDVIRAAQSMPALSSY------IVSEL-SVRLG------ 346
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
+ SGK+ VL R+L L +RIVL+SNYTQTLDLF +CR YP++RLDGTTS
Sbjct: 347 ----QFSGKLAVLERMLHILYHEKKERIVLISNYTQTLDLFQNICRTCNYPFVRLDGTTS 402
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
+ KRQKLV+ FNDP++++F FLLSSKAGGCGLNL+G +RLVLFDPDWNPANDKQAAAR+W
Sbjct: 403 VKKRQKLVDVFNDPTQHQFAFLLSSKAGGCGLNLVGASRLVLFDPDWNPANDKQAAARIW 462
Query: 632 RDGQKKRVFIYRFLSTGTIEEK----------------VYQRQMSKEGLQ 665
RDGQK+RVF YRF STGTIEEK VYQRQ+SKEGLQ
Sbjct: 463 RDGQKRRVFEYRFFSTGTIEEKARKRADCRGSETFFTQVYQRQLSKEGLQ 512
>gi|84998504|ref|XP_953973.1| recombinational repair (RAD54 ) protein [Theileria annulata]
gi|65304971|emb|CAI73296.1| recombinational repair (RAD54 homologue) protein [Theileria
annulata]
Length = 806
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 339/774 (43%), Positives = 450/774 (58%), Gaps = 89/774 (11%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLAR 107
S+ED S N + N+ + R L LSV G + KPFK P G+ G + ++
Sbjct: 17 SEED--SNNGNGYYGSNICLIRAPLF-NFLSVEAGTPIILKPFKSPLE-GHQPGVSEESQ 72
Query: 108 RLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQND 167
R R S L+ P ++E+ LPP +PLVL+ +P+++
Sbjct: 73 RKTLGCRIKSDTKSFLKDFRTGIYLEKPESLED--------LPPD-NPLVLYT-SDPEDE 122
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
V I VD +L RFLR HQR+GVQF+F+C+ GL G GCILADDMGLGKTLQSI
Sbjct: 123 VQ--VEIKVDSILSRFLRDHQRQGVQFIFDCLMGLKGFNG-RGCILADDMGLGKTLQSIT 179
Query: 228 LLYTLLCQGFDGKP----------MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
+++TLL QG D KP +K I+ P SLV+NWE+EIKKW+ G+ A+ E
Sbjct: 180 VMWTLLNQGLDNKPGKTHNYTSSTAARKCAIICPASLVNNWESEIKKWLRGKCPCTAVAE 239
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
S+++ V+S F +S +V+I SYET+R+H S + DLLICDEAHRLKND+T
Sbjct: 240 SSKEKVISSFQGFKYDRTS-KVIISSYETYRLHCSYLE-GVNIDLLICDEAHRLKNDKTR 297
Query: 338 TNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T++ NDL EF+++V+ NP +LGD FRR + I+ GREP
Sbjct: 298 TSQSISTSSAQMRLMLSGTPIQNDLNEFYSLVSLCNPDVLGDVNNFRRNFANPILIGREP 357
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
AT E++ ER +ELS NQF+LRRTNALL+ LPPKII V C LT +Q ++Y F
Sbjct: 358 YATPAEQQKASERLAELSNITNQFVLRRTNALLAKVLPPKIILNVFCNLTDVQKDIYKSF 417
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
++SK K ++++ +S+ L+ I +L KLCNHP L IK G G D
Sbjct: 418 VNSKRWKNIMNQDRVESRALSAIQSLMKLCNHPYL----IKRG--GLMSSPDVDSLLLDI 471
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
+ +S + +LSGK VL RLL +R+ ++DR+V++SNYTQTLDLF +LC+E
Sbjct: 472 ENATKSSKYK---CCRCDLSGKFLVLFRLLYQIRKNSNDRVVIISNYTQTLDLFERLCKE 528
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
YP+ RLDG TSI KR KLV FNDP+ N FVFLLSSKAGGCG+NLIG NRLVLFDPDW
Sbjct: 529 CSYPFERLDGGTSIKKRHKLVTTFNDPNSNSFVFLLSSKAGGCGINLIGANRLVLFDPDW 588
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPANDKQA ARVWRDGQ K +IYRF STGTIEEK+YQRQ+ K+GL ++ TD
Sbjct: 589 NPANDKQALARVWRDGQTKVCYIYRFFSTGTIEEKIYQRQICKDGLSSML---VTDGINE 645
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQ 738
+ LS E L++LF + ++V S+ H+ + C RC +++DG Q D
Sbjct: 646 LKDSLSGEYLKNLFEYKEEVLSDTHDLIECKRC-SHEDGMFL-------------KQKDM 691
Query: 739 EVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASA 792
L +H QL LE+DLN W HH ++PD L +A
Sbjct: 692 ----------LGTVMHV-----PQLKEFLEDDLNTWAHHADLTTIPDQYLVNAA 730
>gi|237837635|ref|XP_002368115.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|211965779|gb|EEB00975.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|221509119|gb|EEE34688.1| transcriptional regulator atrx, putative [Toxoplasma gondii VEG]
Length = 873
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 339/821 (41%), Positives = 471/821 (57%), Gaps = 96/821 (11%)
Query: 31 DDNDDGDDEASAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPF 90
DD+ DG+ + A PS + LVR ++P +LSV +G ++ +PF
Sbjct: 33 DDSKDGETPSDAG--PPSGLFGGRTSCVCLVRA-------PIMP-LLSVEKGPSILFRPF 82
Query: 91 KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLP 150
K P +++ R+ T + L R+ V + F P
Sbjct: 83 KSPLKGHQPGVSEESLRK--------------------TLGVRLKRSSAFAVASKQFKSP 122
Query: 151 PGV---------DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSG 201
P +PLVL+ P D + + VDP+L R+LR HQR+GV+FMF+C+ G
Sbjct: 123 PPAPTSQALPEANPLVLYIPPP---DRPHEKKVEVDPMLTRWLREHQRQGVKFMFDCLMG 179
Query: 202 LLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG-KPMVKKAIIVTPTSLVSNWEA 260
L G GCILADDMGLGKTLQSI +L+TLL Q +G +P V++A++V P SLV+NW A
Sbjct: 180 LKEFQG-EGCILADDMGLGKTLQSITILWTLLEQNIEGTQPAVRRAVVVCPASLVNNWAA 238
Query: 261 EIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC 320
EI+KW+ GR + ++ ++ VVS + F S ++LI SYETFRMH +
Sbjct: 239 EIQKWLQGRCGCTPVADNCKEKVVSKFEGFKYDRQS-RILIASYETFRMHVHRLE-GVPI 296
Query: 321 DLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDA 361
D+++CDEAHRLKND+T T+ +NDL+EFFA+V+ NP ++GDA
Sbjct: 297 DMVVCDEAHRLKNDKTKTSLAIIELPAKKRLLLSGTPIQNDLDEFFALVSLCNPNVVGDA 356
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
FRR Y I+ GREP ATE++++L ER +ELS+ N FILRRTN+LL+ LPPK++
Sbjct: 357 HTFRRRYANPILVGREPDATEDQQQLAAERLTELSSLTNLFILRRTNSLLAKVLPPKVVL 416
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETK-----QSKILAYITALKKLCNHPKLIYD 476
V C+LTPLQ E Y F+ SK+ ++ + E + ++L+ I L KLCNHP L+
Sbjct: 417 NVFCRLTPLQKEFYRSFLSSKSCRKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLV-- 474
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
KS GFE C ++F G+ E+SGK+ +LARLL +R T+
Sbjct: 475 --KSQAQMLQGFEKCEKYFSELDLEGQKAR---SRMVRTEISGKLLLLARLLDVIRTTTN 529
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP-SKNEFVFLLS 595
D+IVL+SNYTQTLDLF ++CR+ YP +RLDG TSI KR ++ FNDP + + FVFLLS
Sbjct: 530 DKIVLISNYTQTLDLFDRMCRDCGYPVMRLDGQTSIKKRHAMITKFNDPMNPHSFVFLLS 589
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCG+NLIG NRLVLFDPDWNPANDKQA ARVWRDGQKK +IYRF STGTIEEK+Y
Sbjct: 590 SKAGGCGVNLIGANRLVLFDPDWNPANDKQALARVWRDGQKKSCYIYRFFSTGTIEEKIY 649
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
QRQ+ K+GL ++ +D + LSTE ++DLF +D S+ H+ + C RC
Sbjct: 650 QRQICKDGLSAML---VSDGENQIKDSLSTELVKDLFRLREDTLSDTHDMLECRRCGCRA 706
Query: 716 DGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWG 775
G + EG+ K ++++E+ L S + E+DL W
Sbjct: 707 AGQDVENEGENERREAKRRETEEEM---------------LGSVPQLDEDFDEDDLVTWA 751
Query: 776 HHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVS 816
HH SVPD L+ +A V + ++ D +++ E +S
Sbjct: 752 HHRDLASVPDPCLRQAALACVDPLACDREDEEMISSEQPIS 792
>gi|221488620|gb|EEE26834.1| DNA repair and recombination protein RAD54, putative [Toxoplasma
gondii GT1]
Length = 872
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 339/821 (41%), Positives = 471/821 (57%), Gaps = 97/821 (11%)
Query: 31 DDNDDGDDEASAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPF 90
DD+ DG+ + A PS + LVR ++P +LSV +G ++ +PF
Sbjct: 33 DDSKDGETPSDAG--PPSGLFGGRTSCVCLVRA-------PIMP-LLSVEKGPSILFRPF 82
Query: 91 KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLP 150
K P +++ R+ T + L R+ V + F P
Sbjct: 83 KSPLKGHQPGVSEESLRK--------------------TLGVRLKRSSAFAVASKQFKSP 122
Query: 151 PGV---------DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSG 201
P +PLVL+ P D + + VDP+L R+LR HQR+GV+FMF+C+ G
Sbjct: 123 PPAPTSQALPEANPLVLYIPPP---DRPHEKKVEVDPMLTRWLREHQRQGVKFMFDCLMG 179
Query: 202 LLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG-KPMVKKAIIVTPTSLVSNWEA 260
L G GCILADDMGLGKTLQSI +L+TLL Q +G +P V++A++V P SLV+NW A
Sbjct: 180 LKEFQG-EGCILADDMGLGKTLQSITILWTLLEQNIEGTQPAVRRAVVVCPASLVNNWAA 238
Query: 261 EIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC 320
EI+KW+ GR + ++ ++ VVS + F S ++LI SYETFRMH +
Sbjct: 239 EIQKWLQGRCGCTPVADNCKEKVVSKFEGFKYDRQS-RILIASYETFRMHVHRLE-GVPI 296
Query: 321 DLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDA 361
D+++CDEAHRLKND+T T+ +NDL+EFFA+V+ NP ++GDA
Sbjct: 297 DMVVCDEAHRLKNDKTKTSLAIIELPAKKRLLLSGTPIQNDLDEFFALVSLCNPNVVGDA 356
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
FRR Y I+ GREP ATE++++L ER +ELS+ N FILRRTN+LL+ LPPK++
Sbjct: 357 HTFRRRYANPILVGREPDATEDQQQLAAERLTELSSLTNLFILRRTNSLLAKVLPPKVVL 416
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETK-----QSKILAYITALKKLCNHPKLIYD 476
V C+LTPLQ E Y F+ SK+ ++ + E + ++L+ I L KLCNHP L+
Sbjct: 417 NVFCRLTPLQKEFYRSFLSSKSCRKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLV-- 474
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
KS GFE C ++F G+ E+SGK+ +LARLL +R T+
Sbjct: 475 --KSQAQMLQGFEKCEKYFSELDLEGQKAR---SRMVRTEISGKLLLLARLLDVIRTTTN 529
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP-SKNEFVFLLS 595
D+IVL+SNYTQTLDLF ++CR+ YP +RLDG TSI KR ++ FNDP + + FVFLLS
Sbjct: 530 DKIVLISNYTQTLDLFDRMCRDCGYPVMRLDGQTSIKKRHAMITKFNDPMNPHSFVFLLS 589
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCG+NLIG NRLVLFDPDWNPANDKQA ARVWRDGQKK +IYRF STGTIEEK+Y
Sbjct: 590 SKAGGCGVNLIGANRLVLFDPDWNPANDKQALARVWRDGQKKSCYIYRFFSTGTIEEKIY 649
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
QRQ+ K+GL ++ +D + LSTE ++DLF +D S+ H+ + C RC
Sbjct: 650 QRQICKDGLSAML---VSDGENQIKDSLSTELVKDLFRLREDTLSDTHDMLECRRC---- 702
Query: 716 DGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWG 775
G + G+ E N+ ++ +E + L S + E+DL W
Sbjct: 703 -GCRAAGQDVENEGENERREAKRETEE-----------EMLGSVPQLDEDFDEDDLVTWA 750
Query: 776 HHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVS 816
HH SVPD L+ +A V + ++ D +++ E +S
Sbjct: 751 HHRDLASVPDPCLRQAALACVDPLACDREDEEMISSEQPIS 791
>gi|403221169|dbj|BAM39302.1| recombinational repair protein [Theileria orientalis strain
Shintoku]
Length = 788
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 338/812 (41%), Positives = 454/812 (55%), Gaps = 120/812 (14%)
Query: 64 NLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARR--LCARKRFVPWGSS 121
N+ + R LL +L+V G + KPFK P G + ++R L R R +
Sbjct: 9 NICLIRAPLLS-LLTVEAGTPIWLKPFKSPLEGHTPVGISEESQRKTLGCRIR----TDT 63
Query: 122 RPVLVTI-TNRLDLPRTVENNVIEENFTLPPGVDPLVLW--QPEEPQNDGGNLVPITVDP 178
+ L T + R VIE+ LPP +PLVL+ PE+P V I VD
Sbjct: 64 KSFLKDFRTGTYEEKR----EVIED---LPPD-NPLVLYTSAPEDPVQ-----VTIKVDS 110
Query: 179 LLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFD 238
+L RFLR HQR+GVQF+F+C+ GL + G GCILADDMGLGKTLQSI +++TLL QG D
Sbjct: 111 ILSRFLRDHQRQGVQFIFDCLMGLKDFEG-RGCILADDMGLGKTLQSITVMWTLLNQGLD 169
Query: 239 GKP----------MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
KP +K I+ P SLV+NWE+EIKKW+ G+ A+ +S+R+ V+S +
Sbjct: 170 NKPGKKEKRNWSVAARKCAIICPASLVNNWESEIKKWLRGKCPCTAIADSSRERVISSFE 229
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
F +S +V+I SYET+RMH + DLLICDEAHRLKND+T T++
Sbjct: 230 GFKYDRNS-RVIISSYETYRMHCGYLE-GVNIDLLICDEAHRLKNDKTRTSQSISASSAK 287
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL EF+++++ NP +LGD FR+ + I+ GREP AT E++
Sbjct: 288 MRLMLSGTPIQNDLNEFYSLISLCNPDVLGDVNNFRKNFANPILIGREPDATPAEQQKAS 347
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER ELS NQF+LRRTNALL+ LPPKII V CKL+ +Q +LY FI SK K I+
Sbjct: 348 ERLLELSNITNQFVLRRTNALLAKVLPPKIIMNVFCKLSDVQKKLYRSFITSKKCKNMIN 407
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
+ET L I +L KLCNHP L+ +P I S
Sbjct: 408 QETVPKSGLTAIQSLMKLCNHPYLLKKGGVLSSPDVDSLLTAIE----------DNSKNK 457
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGK +L RLL H+R+ ++DR+V++SNYTQTLDLF +LC+E +YP+ RLDG
Sbjct: 458 YKNCRSDLSGKFLLLFRLLYHIRRSSNDRVVIISNYTQTLDLFERLCKECKYPFERLDGA 517
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
TSI KR KLV FNDP+ N F+FLLSSKAGGCG+NLIG NRLVLFDPDWNPANDKQA AR
Sbjct: 518 TSIKKRHKLVTSFNDPNSNSFIFLLSSKAGGCGINLIGANRLVLFDPDWNPANDKQALAR 577
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVY-----------QRQMSKEGLQKVIQQEQTDSSAT 678
VWRDGQ K +IYRF S+GTIEEK+Y QRQ+ K+GL ++ TD +
Sbjct: 578 VWRDGQNKVCYIYRFFSSGTIEEKIYQVSSQCRLRWTQRQICKDGLSSML---VTDGTNE 634
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQ 738
+ LS E L+++F + ++V S+ H+ + C RC
Sbjct: 635 LKDSLSGELLKNIFDYKEEVISDTHDLIECKRC--------------------------- 667
Query: 739 EVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAIL-QASAGDEVT 797
T+ G + QL LE+DLN W HH +VPD L +A+ E
Sbjct: 668 -YTEEGQLPHVP-----------QLKEFLEDDLNTWAHHADLTTVPDEYLVKAALSKEPA 715
Query: 798 FVFTN-QVDGKLVPIESKVSPKMQATEGNKNP 828
+ + +VD +P+ +S +++ + + P
Sbjct: 716 VEYEDAEVDVNFMPVSFVMSCRIEFEKVQETP 747
>gi|156369786|ref|XP_001628155.1| predicted protein [Nematostella vectensis]
gi|156215124|gb|EDO36092.1| predicted protein [Nematostella vectensis]
Length = 756
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/753 (41%), Positives = 437/753 (58%), Gaps = 90/753 (11%)
Query: 74 PRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITN--- 130
P+ L ++ P++ P S + N + ++ A + + S+P V I N
Sbjct: 31 PKQLEAEPPSSQFLSPYRKPLSPLPSHANGGTSGKISAHEALIRSLLSKPFKVPIPNYKG 90
Query: 131 ---------RLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNL--------VP 173
R PR ++ EE D LVL++P P L V
Sbjct: 91 SSLSRGLGLRRKGPRRSLHDPYEE--------DALVLYEPP-PLTAQQQLSMDIEKQEVH 141
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ VDPLL + LRPHQREGV+F+++C +G G +GCI+AD+MGLGKTLQ I L++TLL
Sbjct: 142 VVVDPLLCKVLRPHQREGVKFLYDCTTGA-RIQGSYGCIMADEMGLGKTLQCITLIWTLL 200
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDP 293
QG +P+V K IIV P+SLV NW E+ KW+G R+ +A+ ++D++ ++ +
Sbjct: 201 RQGPSAQPIVSKVIIVAPSSLVKNWYNELYKWLGNRINALAIDSGSKDEIDRNLERYMSQ 260
Query: 294 CSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------- 340
S VLI+SYETFR+H++ + S L+ICDE HRLKN ++ T +
Sbjct: 261 QGSRTPTPVLIISYETFRLHAAALH-NGSVGLVICDEGHRLKNLESQTYQALNKLNATRR 319
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
NDL E+F++V+F N GILG + F+R +ET I+ GR+ AT+ E K GIER
Sbjct: 320 VLLSGTPIQNDLLEYFSLVHFVNQGILGTVSEFKRKFETPILRGRDADATDAEHKKGIER 379
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
+EL++ VN+ I+RRT A+LS +LP K+ +VVCC+LT LQ+ +Y IHSK +K ++E
Sbjct: 380 LTELASLVNKCIIRRTAAILSKYLPIKVEQVVCCRLTALQTAIYKRLIHSKALKIKLAEG 439
Query: 452 TK------QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
+K + L +IT+LKKLCNHP+LIY+ + + GFE + FP + F ++
Sbjct: 440 SKGKPGGVSTSSLGFITSLKKLCNHPELIYEKAQMED---EGFEGVLEMFP-QKFDLKN- 494
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
ELSGKM VL +L + +DD++VLVSNYTQTLDLF +LCR+RRY ++R
Sbjct: 495 -------VQPELSGKMQVLDYILAVTKATSDDKVVLVSNYTQTLDLFEKLCRQRRYQHVR 547
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG+ SI KRQK+V+ FNDP +F+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND Q
Sbjct: 548 LDGSMSIKKRQKIVDRFNDPKGGDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 607
Query: 626 AAARVWRDGQKKR--------VFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
A ARVWRDGQKK+ VFIYR LSTGTIEEK++QRQ K+ L + E+ +
Sbjct: 608 AMARVWRDGQKKKAIFDLLLQVFIYRLLSTGTIEEKIFQRQAHKKALSSCVVDEEENVE- 666
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNY------DDGAESIGEGDETNSAN 731
S E LRDLF +++ S+ H+ C RC N G + N
Sbjct: 667 ---KHFSVEQLRDLFRLNEETLSDTHDKFKCRRCVNNIQAHPPPQGTDCTANLSLWNHCA 723
Query: 732 KNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLG 764
+ + +G++ H+ KS EKQLG
Sbjct: 724 SSKGLEDTFLKGAWSSGISFVFHQ-KSHEKQLG 755
>gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864]
Length = 941
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 292/659 (44%), Positives = 402/659 (61%), Gaps = 75/659 (11%)
Query: 83 AAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNV 142
++ KPFK P +NG N AR L RK V R L +
Sbjct: 186 GSILTKPFKVPLANGE---NYIPARGLGMRKPLV-----RCALHS--------------- 222
Query: 143 IEENFTLPPGVDPLVLWQPEE----PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFEC 198
P LVL+ PE+ P + V + VDP+L + LR HQREGV+F+++
Sbjct: 223 -------PDDEGALVLFAPEKTSALPLDPKTKEVHVVVDPMLTKVLRLHQREGVKFLYDA 275
Query: 199 VSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
V G + G GCI+AD+MGLGKTLQ ++L++TLL QG +G P ++KA+I+ P SLV NW
Sbjct: 276 VMGDI-VEGYQGCIMADEMGLGKTLQCVSLIWTLLRQGRNGMPTIEKAVIICPASLVKNW 334
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFS 315
E++KW+ G+VQ + + ++ + S +++F + L +LI+SYETFR+H +
Sbjct: 335 HNELQKWLQGKVQSLPVDGGDKEKIESNLNNFINCTGRLLNQPILIISYETFRIHVDILA 394
Query: 316 CSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPG 356
S+ L+ICDE HRLKN Q+ T + NDL E+F+++ FTNPG
Sbjct: 395 -SKPVGLVICDEGHRLKNAQSQTFQALNQLKTDRRVLLSGTPIQNDLTEYFSLLLFTNPG 453
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+LG A FRR +E I+ GRE +AT++EK++G E+ EL+ VN+FI+RRTN+LLS +LP
Sbjct: 454 LLGTQAEFRRRFENPILRGREASATDKEKEIGTEKLQELAKIVNKFIIRRTNSLLSKYLP 513
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI---LAYITALKKLCNHPKL 473
K+ +VVC KL+PLQ++LY I SK VK+ I+ + L IT LKKLCNHP L
Sbjct: 514 TKVDQVVCIKLSPLQTQLYEALIKSKAVKKLIASSASDGQTAASLGSITLLKKLCNHPDL 573
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
IY+ + F + + FPPE T SGK VL +L +++
Sbjct: 574 IYEACQEN------FRELLPLFPPEYGVKNKRGRTFNPAH----SGKFQVLDTMLAYVKS 623
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
T+DR+VL+SNYTQT+DLF L R R Y ++RLDGT S+ RQKLV+ FN+PS N F+FL
Sbjct: 624 TTNDRVVLISNYTQTIDLFEDLARLRGYRFVRLDGTLSVKARQKLVDEFNNPSSNVFLFL 683
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LSSKAGGCG+NLIGGNRLVLFDPDWNPA+D QA ARVWRDGQKK+V++YRFL TGTIEEK
Sbjct: 684 LSSKAGGCGINLIGGNRLVLFDPDWNPASDGQAMARVWRDGQKKKVYLYRFLGTGTIEEK 743
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
++QRQ K L + E+ + ++E+LRDLFT ++ S+ H+ +C C+
Sbjct: 744 IFQRQAHKMALSSCVVDEEENVE----RHFTSENLRDLFTLNNTTSSDTHDRFNCEPCK 798
>gi|224008985|ref|XP_002293451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970851|gb|EED89187.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 543
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 285/561 (50%), Positives = 361/561 (64%), Gaps = 43/561 (7%)
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
V P+L ++LRPHQREGVQFM++CV GL + G GCILADDMGLGKTLQS+ L++TLL
Sbjct: 1 VPPVLAKWLRPHQREGVQFMYDCVMGLKDFQG-AGCILADDMGLGKTLQSVTLIWTLLQT 59
Query: 236 GFDGKPM--VKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTD 292
G + + I+V P SLV NW+ E KW+G G V+ +AL ES R V ID F
Sbjct: 60 GITANNIRTCNRIIVVCPCSLVKNWDNEFIKWLGPGVVKTLALAESDRKTVEKNIDCFVK 119
Query: 293 PCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTN------------ 339
VLI SYET R H + + + CDLL+CDEAHRLKN + T+
Sbjct: 120 T-KMFNVLICSYETLRTHVGRLTKYKDCCDLLVCDEAHRLKNRENQTSMALNSLPVRRRV 178
Query: 340 -------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
+NDLEEF+AMV+FTNPGILG FRR I+ GREP ATE++K +E
Sbjct: 179 LLTGTPMQNDLEEFYAMVDFTNPGILGTQEDFRRKMLYPILRGREPDATEKQKTRMMEIQ 238
Query: 393 SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET 452
+++S VN+FILRR N L + HLPPK+++VVCC LT +QS +Y H +SK ++ + +
Sbjct: 239 NDMSTTVNEFILRRVNTLNAQHLPPKLVQVVCCNLTEIQSNMYAHLCNSKAMQHVL--DG 296
Query: 453 KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
KQ L I L KLCNHP L+ + S PG G +F P E G +
Sbjct: 297 KQVNCLGSIQMLMKLCNHPSLVVNEKSSAAPGADGIA---KFMPYEAIRGDRNA-----P 348
Query: 513 AWVELSGKMHVLARLLGHLRQ--RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
ELSGKM VL RL+ +R+ +D+IV+VSNYTQTLDL ++CRE + + RLDG+
Sbjct: 349 VMPELSGKMFVLFRLMREMRRPGNGNDKIVIVSNYTQTLDLIGRMCRENNWGFCRLDGSI 408
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
S+ KRQK+ + FNDPS + FLLSSKAGGCGLNLIGGNRLVLFDPDWNPA DKQAAAR
Sbjct: 409 SMKKRQKMCDEFNDPSSSLVAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARC 468
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
WRDGQKKR F YRFL+TGT+EEK++QRQ+SKEGLQ V+ + Q N LST+DL++
Sbjct: 469 WRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKD------QVNSLSTKDLKN 522
Query: 691 LFTFHDDVRSEIHENMHCTRC 711
LF S+ H+ + C RC
Sbjct: 523 LFKLRSGTPSDTHDKLKCERC 543
>gi|350424065|ref|XP_003493677.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
impatiens]
Length = 748
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 300/690 (43%), Positives = 406/690 (58%), Gaps = 96/690 (13%)
Query: 150 PPGVDPLVLWQPEEPQ-------NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LV++ P E + LV + VDPLL LRPHQREGV+FM+ECV+G
Sbjct: 113 PEEANALVVYSPPELSEHEKLKIDQSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGK 172
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
G +GCI+AD+MGLGKTLQ I LL+TLL QG + KP+++KAIIV P+SLV NW EI
Sbjct: 173 -RIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEI 231
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSE 318
KW+ RVQ +A+ + D+ + + F C + +LI+SYETFR+H+ E
Sbjct: 232 FKWLKNRVQPLAIDGGNKTDIDTKLTGFMKTYGRRCIN-PILIISYETFRLHAQVLHQDE 290
Query: 319 SCDLLICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILG 359
L++CDE HRLKN Q L N +NDL E+F++V+F N G+LG
Sbjct: 291 -VGLVLCDEGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLG 349
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A FR+ +E I+ G++ AT+ E+KL ER +EL + VN+ ++RRT+ALLS +LP K
Sbjct: 350 TAQEFRKKFEIPILRGQDAAATDTERKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKY 409
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK------ILAYITALKKLCNHPKL 473
VVC ++ LQ++LYN FI S +V++++ E + SK LA IT LKKLC HP L
Sbjct: 410 ELVVCIRMGKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDL 469
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
+YD I + GFE+ + PP +S + ELSGK+ VL LL ++
Sbjct: 470 VYDKILEK---SDGFENAAKLMPPN-YSTKE--------IMPELSGKLMVLDCLLASIKT 517
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
T+D+IVLVSNYTQTLDLF +LC +R Y Y+RLDGT +I KR K+V FNDP+ N+F+F+
Sbjct: 518 TTNDKIVLVSNYTQTLDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFIFM 577
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK FIYRFL TGTIEEK
Sbjct: 578 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIEEK 637
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
++QRQ K+ L + ++ D + + DLRDLF ++ S+ H C RC N
Sbjct: 638 IFQRQAHKKALSSTVVDQEEDVA----RHFTLNDLRDLFKLEENTISDTHAKFKCKRCIN 693
Query: 714 YDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNN 773
G E G ++++ DL++
Sbjct: 694 ---GIEVKGPPEQSDC--------------------------------------NSDLSD 712
Query: 774 WGHHFYSMSVPDAILQASAGDEVTFVFTNQ 803
W H + +PD L+ ++FVF ++
Sbjct: 713 WRHIYNPRPLPDIPLRQCWSCGISFVFCHR 742
>gi|401408081|ref|XP_003883489.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
gi|325117906|emb|CBZ53457.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
Length = 713
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 295/641 (46%), Positives = 401/641 (62%), Gaps = 58/641 (9%)
Query: 179 LLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFD 238
+L R+LR HQR+GV+FMF+C+ GL + G GCILADDMGLGKTLQSI +L+TLL Q +
Sbjct: 1 MLTRWLREHQRQGVKFMFDCLMGLKDFQG-EGCILADDMGLGKTLQSITILWTLLEQNIE 59
Query: 239 G-KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL 297
G +P V++A++V P SLV+NW AEI+KW+ GR + ++ +D VVS + F S
Sbjct: 60 GTQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKDKVVSKFEGFKYDRQS- 118
Query: 298 QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------------ 339
++LI SYETFR+H + D+++CDEAHRLKND+T T+
Sbjct: 119 RILIASYETFRVHVHRLE-GVPIDMVVCDEAHRLKNDKTKTSLAIIELPAKKRLLLSGTP 177
Query: 340 -RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
+NDL+EFFA+V+ NP ++GDA FR+ Y I+ GREP ATE++++L R +ELS+
Sbjct: 178 IQNDLDEFFALVSLCNPNVVGDAHTFRKRYANPILIGREPDATEDQQQLAAARLTELSSL 237
Query: 399 VNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK----- 453
N FILRRTN+LL+ LPPK++ V C+LTPLQ E Y F+ SK+ ++ + E +
Sbjct: 238 TNMFILRRTNSLLAKVLPPKVVLNVFCRLTPLQKEFYRSFLSSKSCRKIFAAEAEGKSGF 297
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
++L+ I L KLCNHP L+ KS GFE C ++F G+
Sbjct: 298 TGRVLSSIQGLMKLCNHPSLV----KSQAQMLQGFEKCEKYFSELDLEGQKAR---SRLV 350
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
E+SGK+ +LARLL +R T+D+IVL+SNYTQTLDLF ++CR+ YP +RLDG TSI
Sbjct: 351 RPEISGKLLLLARLLDVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRLDGQTSIK 410
Query: 574 KRQKLVNHFNDP-SKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR ++ FNDP + FVFLLSSKAGGCG+NLIG NRLVLFDPDWNPANDKQA ARVWR
Sbjct: 411 KRHAMITKFNDPMNPQSFVFLLSSKAGGCGVNLIGANRLVLFDPDWNPANDKQALARVWR 470
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
DGQKK +IYRF STGTIEEK+YQRQ+ K+GL ++ +D + LSTE ++DLF
Sbjct: 471 DGQKKPCYIYRFFSTGTIEEKIYQRQICKDGLSAML---VSDGENQIKDSLSTELVKDLF 527
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
+D S+ H+ + C RC G + N+ + +E +
Sbjct: 528 RLREDTVSDTHDMLDCERC----------GFASRRDVENEGENGRREAS--------TET 569
Query: 753 LHKLKSSEKQLGTPL-EEDLNNWGHHFYSMSVPDAILQASA 792
H++++ QL E+DL W HH S+PD L+ +A
Sbjct: 570 EHEIRNFVPQLEEDFDEDDLLTWAHHSDLASLPDPCLRQAA 610
>gi|340726376|ref|XP_003401535.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
terrestris]
Length = 746
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 298/690 (43%), Positives = 404/690 (58%), Gaps = 96/690 (13%)
Query: 150 PPGVDPLVLWQPEEPQ-------NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LV++ P E + LV + VDPLL LRPHQREGV+FM+ECV+G
Sbjct: 111 PEEANALVVYSPPELSEHEKLKIDQSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGK 170
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
G +GCI+AD+MGLGKTLQ I LL+TLL QG + KP+++KAIIV P+SLV NW EI
Sbjct: 171 -RIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEI 229
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSE 318
KW+ RVQ +A+ + D+ + + F C + +LI+SYETFR+H+ +
Sbjct: 230 FKWLKNRVQPLAIDGGNKVDIDTKLTGFMKTYGRRCIN-PILIISYETFRLHAQVLH-QD 287
Query: 319 SCDLLICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILG 359
L++CDE HRLKN Q L N +NDL E+F++V+F N G+LG
Sbjct: 288 EVGLVLCDEGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLG 347
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A FR+ +E I+ G++ AT+ E+KL ER +EL + VN+ ++RRT+ALLS +LP K
Sbjct: 348 TAQEFRKKFEIPILRGQDAAATDTERKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKY 407
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK------ILAYITALKKLCNHPKL 473
VVC ++ LQ++LYN FI S +V++++ E + SK LA IT LKKLC HP L
Sbjct: 408 ELVVCIRMGKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDL 467
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
+YD I + GFE+ + PP + ELSGK+ VL LL ++
Sbjct: 468 VYDKILEK---SDGFENAAKLMPPNYNTKE---------IMPELSGKLMVLDCLLASIKT 515
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
T+D+IVLVSNYTQTLDLF +LC +R Y Y+RLDGT +I KR K+V FNDP+ N+F+F+
Sbjct: 516 TTNDKIVLVSNYTQTLDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFIFM 575
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK FIYRFL TGTIEEK
Sbjct: 576 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIEEK 635
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
++QRQ K+ L + ++ D + + DLRDLF ++ S+ H C RC N
Sbjct: 636 IFQRQAHKKALSSTVVDQEEDVA----RHFTLNDLRDLFKLEENTISDTHAKFKCKRCVN 691
Query: 714 YDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNN 773
G E G ++++ DL++
Sbjct: 692 ---GIEVKGPPEQSDC--------------------------------------NSDLSD 710
Query: 774 WGHHFYSMSVPDAILQASAGDEVTFVFTNQ 803
W H + +PD L+ ++FVF ++
Sbjct: 711 WRHIYNPRHLPDIPLRQCWSCGISFVFCHR 740
>gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos
saltator]
Length = 679
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 286/613 (46%), Positives = 385/613 (62%), Gaps = 55/613 (8%)
Query: 150 PPGVDPLVLWQPEEPQND-------GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + L+++ P E LV + +DPLL LRPHQREGV+FM+ECV+G
Sbjct: 45 PNEANALIVYSPPEMSEHERLKADLCKQLVHVVIDPLLCNVLRPHQREGVKFMYECVTGK 104
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ I LL+TLL QG + KP++ KAIIV P+SLV NW EI
Sbjct: 105 -RIEDAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEI 163
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSS---LQVLIVSYETFRMHSSKFSCSES 319
KW+ RV +A+ + D+ + + SF + +LI+SYETFR+H+ +E
Sbjct: 164 YKWLNNRVSALAIDGGKKKDIDTKLISFMKTYNGRCVYPILIISYETFRLHAHVLHQNE- 222
Query: 320 CDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGD 360
L++CDE HRLKN + T + NDL E+F++V+F N G+LG
Sbjct: 223 VGLVLCDEGHRLKNSENQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGT 282
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
A FRR +ET I+ G++ AT+EE+KL ER S+L + VN+ ++RRT+ALLS +LP K
Sbjct: 283 AQEFRRKFETPILRGQDAEATDEERKLAEERLSDLVSVVNKCLIRRTSALLSKYLPLKHE 342
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK-----ILAYITALKKLCNHPKLIY 475
VVC K+ LQ+ LY FIHS ++K+++ + K LA IT LKKLCNHP LIY
Sbjct: 343 LVVCIKMGELQTRLYKSFIHSDSIKKSMEDSDNSKKGGSLSALAAITLLKKLCNHPDLIY 402
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
D IK + GFE+ R P +S + +LSGK+ VL LL ++ T
Sbjct: 403 DKIKER---SDGFENAARLLPAN-YSTKE--------LLPDLSGKLMVLDCLLASIKTTT 450
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLS 595
+D+IVLVSNYTQTLDLF +LC +R Y Y+RLDGT +I KR K+V++FN S ++F+F+LS
Sbjct: 451 NDKIVLVSNYTQTLDLFEKLCHKRGYNYVRLDGTMTIKKRSKVVDNFNSESSSDFIFMLS 510
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK F+YRFLSTGTIEEK++
Sbjct: 511 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIF 570
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
QRQ K+ L + ++ D + + DLRDLF ++ S+ H C RC N
Sbjct: 571 QRQAHKKALSSTVVDQEDDVA----RHFTQTDLRDLFKLEENTVSDTHAKFKCKRCIN-- 624
Query: 716 DGAESIGEGDETN 728
G E+ G ++++
Sbjct: 625 -GIETKGPSEQSD 636
>gi|354470052|ref|XP_003497406.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 1
[Cricetulus griseus]
gi|354470056|ref|XP_003497407.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 2
[Cricetulus griseus]
Length = 744
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 274/564 (48%), Positives = 367/564 (65%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 138 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 196
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP ++KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 197 LLRQSPECKPEIEKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDRKLEGFM 256
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H + L+ICDE HRLKN + T +
Sbjct: 257 NQRGARVPSPILIISYETFRLHVGVLK-KGNVGLVICDEGHRLKNSENQTYQALDSLNTS 315
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++LG
Sbjct: 316 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILRSRDAAASEADRQLGE 375
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + +
Sbjct: 376 ERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELR 435
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD SG GFED + FPP S
Sbjct: 436 EGKMSVSSLSSITSLKKLCNHPALIYDKCVSGE---DGFEDTLDIFPPGYTS-------- 484
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 485 -KAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 543
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 544 MSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 603
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 604 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 659
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT + S+ H+ +HC RC N
Sbjct: 660 ELFTLDEASLSDTHDRLHCRRCVN 683
>gi|219123447|ref|XP_002182036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406637|gb|EEC46576.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 545
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/563 (49%), Positives = 363/563 (64%), Gaps = 43/563 (7%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ V P+L ++LRPHQREGVQF++ECV GL + G HGCILADDMGLGKTLQS+ L++TLL
Sbjct: 1 VYVPPVLAKWLRPHQREGVQFIYECVMGLKDFNG-HGCILADDMGLGKTLQSVTLIHTLL 59
Query: 234 CQGF--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSF 290
G +G P K+ I+V P SLV NWE E KW+G G V+ +A+ E+ R V +D+F
Sbjct: 60 KTGITANGAPTAKRVIVVCPCSLVKNWENEFVKWLGPGVVKTLAIAEADRKTVERNLDTF 119
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTNR--------- 340
V+I SYE R H + S ++ CDLL+CDEAHRLKN T+R
Sbjct: 120 VRT-KIFNVMIASYECIRTHVGRLSKHADCCDLLVCDEAHRLKNSDNQTSRALNSLPVRR 178
Query: 341 ----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIE 390
NDL+EF+AMV+FTNPGILG FRR I+ GREP A++ +K ++
Sbjct: 179 RVLLTGTPMQNDLQEFYAMVDFTNPGILGTPEEFRRKTLFPILRGREPDASDAQKHKMMQ 238
Query: 391 RSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
+++S VN FILRR N L + HLPPK+++VVCC LT +Q +Y H ++SK+++ +
Sbjct: 239 IQNDMSRIVNDFILRRVNTLNAQHLPPKLVQVVCCNLTEIQQNMYQHLVNSKDMQHVL-- 296
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ KQ L+ I L KL NHP L PG G + + P E GR G +
Sbjct: 297 DGKQVNCLSSIQMLMKLANHPSLA----SMAAPGADGIAKFLPYVPGE-GGGRRGDFAPV 351
Query: 511 DGAWVELSGKMHVLARLLGHLRQ--RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
W SGKM VL RL+ +R+ +D+IV+VSNYTQTLDL ++CRE + + RLDG
Sbjct: 352 RPEW---SGKMFVLYRLMKEMRKPGNGNDKIVIVSNYTQTLDLIGRMCRENSWGFCRLDG 408
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
+ ++ KRQK+ + FNDP+ FLLSSKAGGCGLNLIGGNRLVLFDPDWNPA DKQAAA
Sbjct: 409 SITMKKRQKMCDEFNDPNSPLVAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAA 468
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R WRDGQKKR F YRFL+TGT+EEK++QRQ+SKEGLQ V+ ++ Q N LST+DL
Sbjct: 469 RCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKE------QTNQLSTKDL 522
Query: 689 RDLFTFHDDVRSEIHENMHCTRC 711
++LF S+ H+ + C RC
Sbjct: 523 KNLFKLRTGTPSDTHDKLRCERC 545
>gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein, partial
[Ascaris suum]
Length = 755
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/603 (46%), Positives = 377/603 (62%), Gaps = 54/603 (8%)
Query: 150 PPGVDPLVLWQPEEPQ-------NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P LVL+ P E ++ V + VDP+L LRPHQREGV+FM++C +G+
Sbjct: 122 PYAEGALVLYTPPEISAHDALKIDEKTKKVHVVVDPVLAAILRPHQREGVKFMYDCTTGM 181
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ I LL+TLL Q D KPM+ K +IV P+SLV NW+ EI
Sbjct: 182 -RIENAYGCIMADEMGLGKTLQCITLLWTLLRQSPDAKPMISKVVIVCPSSLVKNWDKEI 240
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSE 318
KW+GGRV + + ++++ ++SF CS+ VLI+SYETFR+H+ E
Sbjct: 241 AKWLGGRVNSLPIDSGGKEEIDRNLESFLSQMGSRCST-PVLIISYETFRLHAEVLLRKE 299
Query: 319 SCDLLICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILG 359
L+ICDE HRLKN Q L+ +NDL E++++VNF NPG+LG
Sbjct: 300 -VGLVICDEGHRLKNSDNQTYQALSGLKCERRVLISGTPIQNDLLEYYSLVNFVNPGLLG 358
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A F+R +E I+ GR+ AT+ ++ G E +E+++ VN+ I+RRT++LL+ +LP K
Sbjct: 359 TAQEFKRRFENVILRGRDADATDAQRAKGDEALAEMASIVNKCIIRRTSSLLTKYLPVKY 418
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ--SKILAYITALKKLCNHPKLIYDT 477
+VCCKLT LQ +LY I SK +K S + L++IT LKKLCNHP+L+YD
Sbjct: 419 ELIVCCKLTDLQEKLYQKLISSKRLKEDTSRSDGKITGTALSFITNLKKLCNHPQLVYDK 478
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
+ G F+ C+ FP FS ++ SGKM VL LL +Q T+D
Sbjct: 479 CQKNEEG---FQGCLELFPSG-FSDKTFEPA--------FSGKMKVLDYLLAVTKQTTND 526
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+ VLVSNYTQT+D F +LC+ RRY Y+RLDG++SI +R K+V FNDP+ +E+VFLLSSK
Sbjct: 527 KFVLVSNYTQTIDSFVELCKLRRYGYVRLDGSSSIKQRAKIVEKFNDPTSSEYVFLLSSK 586
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCGLNLIG NRLV+FDPDWNPAND QA AR+WRDGQKK FIYR L+TGTIEEK++QR
Sbjct: 587 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARIWRDGQKKHCFIYRLLATGTIEEKMFQR 646
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG 717
Q K+ L + E+ D + S + LR LF + S+ H + CTRC N G
Sbjct: 647 QTHKKALSSCVVDEEVDVA----RHFSKDQLRHLFELKTGIASDTHNTLKCTRCVN---G 699
Query: 718 AES 720
ES
Sbjct: 700 IES 702
>gi|432853422|ref|XP_004067699.1| PREDICTED: DNA repair and recombination protein RAD54-like [Oryzias
latipes]
Length = 733
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 294/683 (43%), Positives = 399/683 (58%), Gaps = 94/683 (13%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNL---------VPITVDPLLVRFLRPHQREGVQFMFECVS 200
P D LVL++P P +L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 101 PFAEDALVLYEP--PNLSAHDLIRADKDKLPVHVVVDPVLGKVLRPHQREGVRFLWECVT 158
Query: 201 GLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEA 260
G G HGCI+AD+MGLGKTLQ IAL++TLL Q DGKP + KAI+V+P+SLV NW
Sbjct: 159 GR-RIPGSHGCIMADEMGLGKTLQCIALVWTLLRQSPDGKPEIDKAIVVSPSSLVRNWYN 217
Query: 261 EIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV----LIVSYETFRMHSSKFSC 316
E+ KW+GGRV +A+ +++++ + +F + L+V LI+SYETFR+H++
Sbjct: 218 EVGKWLGGRVSPVAIDGGSKEEIDRQLVNFVSQ-NGLRVPTPILIISYETFRLHAAVLH- 275
Query: 317 SESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGI 357
L+ICDE HRLKN T + NDL E+F++V+F N GI
Sbjct: 276 RGRVGLVICDEGHRLKNADNQTYQALNAMKAQRRVLISGTPIQNDLLEYFSLVHFVNAGI 335
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG A F++ +E I+ GR+ A++ +++ G E+ EL VN+ ++RRT+ +LS +LP
Sbjct: 336 LGSAQDFKKRFELPILKGRDADASDADRRAGEEKLKELIGIVNRCLIRRTSDILSKYLPV 395
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K+ +VVCC+LTPLQ+ELY F+ + + + + L+ IT+LKKLCNHP LI+D
Sbjct: 396 KVEQVVCCRLTPLQAELYRLFLRQAKPLQTLQQGSMNVSSLSSITSLKKLCNHPTLIHDK 455
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
SG GF+ + FPP S +LSGKM VL +L R T D
Sbjct: 456 CVSGE---EGFDGALDLFPPGYSSKEVEP---------QLSGKMLVLDYILAMTRTTTSD 503
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
++VLVSNYTQTLDLF +LCR RRY Y+RLDG+ SI KR K+V FN PS +F+F+LSSK
Sbjct: 504 KVVLVSNYTQTLDLFEKLCRSRRYLYVRLDGSMSIKKRAKMVERFNSPSSPDFIFMLSSK 563
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK ++YR L+TGTIEEK+ QR
Sbjct: 564 AGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYVYRLLTTGTIEEKILQR 623
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG 717
Q K+ L + E+ D S +LR+LFT +++ S+ H+ C RC N
Sbjct: 624 QAHKKALSSCVVDEEQDVE----RHFSLGELRELFTLNEETASDTHDKFRCRRCVN-GRQ 678
Query: 718 AESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHH 777
EG + S DL+ W H
Sbjct: 679 VRPPAEGADCTS----------------------------------------DLSQWNHC 698
Query: 778 FYSMSVPDAILQASAGDEVTFVF 800
F + D +L+AS V+FVF
Sbjct: 699 FDKRGLLDPVLKASWDAAVSFVF 721
>gi|345780848|ref|XP_532592.3| PREDICTED: DNA repair and recombination protein RAD54-like [Canis
lupus familiaris]
Length = 747
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 286/654 (43%), Positives = 388/654 (59%), Gaps = 84/654 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLIWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 260 NQRGVRVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+E +++LG
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 379 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLKQAKPAEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT LKKLCNHP LIYD GFE + FPP +S ++
Sbjct: 439 EGKMTVSSLSSITLLKKLCNHPALIYDKCVEEE---DGFEGALEIFPP-TYSAKALE--- 491
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 492 -----PQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 546
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+P +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 547 MSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 606
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 607 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 662
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+LFT + S+ H+ + C RC N
Sbjct: 663 ELFTLDEASLSDTHDRLRCRRCVNN----------------------------------- 687
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
H+++ G+ DL W H+ + D +LQA +A +TFVF
Sbjct: 688 ----HQVRPPPD--GSDCTSDLAQWNHNTDKRGLKDEVLQAAWDAASTAITFVF 735
>gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi]
gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi]
Length = 865
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/592 (47%), Positives = 373/592 (63%), Gaps = 54/592 (9%)
Query: 156 LVLWQPEE-PQNDGGNL-------VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG 207
LVL+ P E +D L V + VDP L LRPHQREGV+FM++CV+G+
Sbjct: 216 LVLFTPPELSAHDALKLDTTNKQKVHVVVDPTLSAVLRPHQREGVKFMYDCVTGV-RIPS 274
Query: 208 IHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
HGCI+AD+MGLGKTLQ I L++TLL QG D KP + K +IV P+SLV NW+ EI+KW+G
Sbjct: 275 AHGCIMADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKTVIVCPSSLVKNWDKEIRKWLG 334
Query: 268 GRVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
GRV + + +D++ ++ F C + VLI+SYETFR+H+S E L+
Sbjct: 335 GRVNALPVDSGGKDEIDRNLEKFMSQMGVRCPT-PVLIISYETFRLHASILLQKE-IGLI 392
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN T + NDL E+++++NF NPG+LG A+ F
Sbjct: 393 ICDEGHRLKNSDNQTYQALFGLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEF 452
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
+R +E I+ GR+ AT+ +++ G +E+S+ V++ I+RRT+ALL+ +LP K ++C
Sbjct: 453 KRRFENIILRGRDADATDAQREKGDTALTEMSSIVSKCIIRRTSALLTKYLPVKYELIIC 512
Query: 425 CKLTPLQSELYNHFI--HSKNVKRAISEETKQS-KILAYITALKKLCNHPKLIYDTIKSG 481
CKLT LQ +LY I SK K+ ++E K + L++IT LKKLCNHP+LI + +
Sbjct: 513 CKLTELQEKLYRQLISAFSKGGKQKVTEGDKITGTALSFITNLKKLCNHPQLILNKCQKK 572
Query: 482 NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
GFEDC++ FP E G SGKM VL LL R T+D+ VL
Sbjct: 573 E---EGFEDCLKLFPGEF----------GKKFEPAFSGKMKVLDYLLAATRATTNDKFVL 619
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGC 601
VSNYTQT+D F +LC+ RRYPY+RLDGT +I +R KLV FNDP E+VFLLSSKAGGC
Sbjct: 620 VSNYTQTIDAFVELCQLRRYPYIRLDGTCTIKQRAKLVEKFNDPESVEYVFLLSSKAGGC 679
Query: 602 GLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSK 661
GLNLIG NRL++FDPDWNPAND QA ARVWRDGQKK FIYR LSTG+IEEK++QRQ K
Sbjct: 680 GLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKNCFIYRLLSTGSIEEKMFQRQAHK 739
Query: 662 EGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ L + E +D + S + LR LF DV S+ H ++ C RC N
Sbjct: 740 KALSSCVVDEISDVA----RHFSKDQLRHLFDLKADVASDTHHSLKCDRCVN 787
>gi|71033369|ref|XP_766326.1| DNA repair protein Rad54 [Theileria parva strain Muguga]
gi|68353283|gb|EAN34043.1| DNA repair protein rad54, putative [Theileria parva]
Length = 786
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 325/761 (42%), Positives = 431/761 (56%), Gaps = 111/761 (14%)
Query: 63 GNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARR--LCARKRFVPWGS 120
N+ + R L L+V G + KPFK P G+ G + ++R L R +
Sbjct: 30 SNICLIRAPLF-NFLTVEAGTPIILKPFKSPLE-GHQPGVSEESQRKTLGCRIKSDTKSF 87
Query: 121 SRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLL 180
R I L+ P ++E+ LPP +PLVL+ + D V I VD +L
Sbjct: 88 LRDFRAGIY--LEKPESLED--------LPPD-NPLVLYTSDP---DAEVQVEIKVDSIL 133
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK 240
RFLR HQR+GVQF+F+C+ GL G GCILADDMGLGKTLQSI +++TLL QG D K
Sbjct: 134 SRFLRDHQRQGVQFIFDCLMGLKGFNG-RGCILADDMGLGKTLQSITVMWTLLNQGLDNK 192
Query: 241 P----------MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
P +K I+ P SLV+NWE+EIKKW+ GR + ES+++ V+S F
Sbjct: 193 PGKALNYSSSTAARKCAIICPASLVNNWESEIKKWLRGRCPCTPVAESSKEKVISSFQGF 252
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------- 340
+S +V+I SYET+R+H S + DLLICDEAHRLKND+T T++
Sbjct: 253 KYDRTS-RVIISSYETYRLHCSYLE-GVNIDLLICDEAHRLKNDKTRTSQSISNSSAKMR 310
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
NDL EF+++V+ NP +LGD FRR + S ER
Sbjct: 311 LMLSGTPIQNDLNEFYSLVSLCNPDVLGDVNSFRRNFAAS------------------ER 352
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
+ELS NQF+LRRTNALL+ LPPKII V C LT +Q ++Y F+ S+ K ++++
Sbjct: 353 LAELSNITNQFVLRRTNALLAKVLPPKIILNVFCNLTDVQKDIYKSFVTSRRWKNIMNQD 412
Query: 452 TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGD 511
T S+ L+ I +L KLCNHP L+ K G G++ D + + +S +
Sbjct: 413 TVVSRALSAIQSLMKLCNHPFLL----KRG--GSSPDVDSLLLDIEN--ATKSSKYKC-- 462
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
+LSGK VL RLL +R+ +DR+V++SNYTQTLDLF +LC+E YP+ RLDGTTS
Sbjct: 463 -CRCDLSGKFLVLYRLLYQIRRHGNDRVVIISNYTQTLDLFERLCKECNYPFERLDGTTS 521
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
I KR KLV FNDP+ N F+FLLSSKAGGCG+NLIG NRLVLFDPDWNPANDKQA ARVW
Sbjct: 522 IKKRHKLVTTFNDPNSNSFIFLLSSKAGGCGINLIGANRLVLFDPDWNPANDKQALARVW 581
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
RDGQ K +IYRF STGTIEEK+YQRQ+ K+GL ++ TD + LS E L++L
Sbjct: 582 RDGQTKVCYIYRFFSTGTIEEKIYQRQICKDGLSSML---VTDGINELKDSLSGEYLKNL 638
Query: 692 FTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAG 751
F + +++ S+ H+ + C RC N D G F L
Sbjct: 639 FEYKENIISDTHDLIECKRCSNQD----------------------------GKFVKLII 670
Query: 752 CLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASA 792
L + Q LE+DLN W HH ++PD L ++A
Sbjct: 671 TLGPVMHV-PQDKDFLEDDLNTWAHHSDLTTIPDEYLVSAA 710
>gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 745
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 280/598 (46%), Positives = 375/598 (62%), Gaps = 52/598 (8%)
Query: 150 PPGVDPLVLWQPEE-------PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + L+L+ P E N LV + VDP+L LRPHQREGV+FM++CV+G+
Sbjct: 108 PDEPNALILFSPPEFSAHEKLKTNSEEQLVHVVVDPMLSNVLRPHQREGVKFMYDCVTGV 167
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ I L++TLL QG D KP+++KAI+V P+SLV NW EI
Sbjct: 168 -KIENAYGCIMADEMGLGKTLQCITLMWTLLKQGPDCKPLIEKAIVVAPSSLVKNWYNEI 226
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV---LIVSYETFRMHSSKFSCSES 319
KW+ GRV +A+ ++DD+ + SF + S V LI+SYETFR+H E
Sbjct: 227 NKWLKGRVNALAIDSGSKDDIDRNLQSFMNTYSRRPVNPILIISYETFRLHVKVLHKGE- 285
Query: 320 CDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGD 360
L++CDE HRLKN + T + NDL E+F++++F N GILG
Sbjct: 286 VGLVLCDEGHRLKNHENQTYQALMGLNAKRRVLLSGTPIQNDLLEYFSLIHFVNQGILGT 345
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
AA FR+ +E I+ G++ +T EE+K G E +++A VN+ ++RRT ALLS +LP K
Sbjct: 346 AAEFRKKFEIPILRGQDANSTIEERKKGQECLEQMAALVNRCLIRRTAALLSKYLPVKTE 405
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK-----ILAYITALKKLCNHPKLIY 475
+V+C LT LQ +LY FI S +K+ + EE K L+ IT LKKLCNHP L+Y
Sbjct: 406 QVICITLTGLQKQLYEDFIASDALKKTVREEKNSKKGMSLTALSAITTLKKLCNHPDLVY 465
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
+ I T GFE+ +++ P E + ++ E+SGK+ L LL ++ T
Sbjct: 466 ENIMKQ---TEGFENALKYLP-EKYDIKN--------VRPEMSGKLMFLDTLLALIKATT 513
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLS 595
+D+IVLVSNYTQTLDLF +L R R Y Y+RLDG+ +I KR K+V FNDP +F+F+LS
Sbjct: 514 NDKIVLVSNYTQTLDLFEKLSRFRNYQYVRLDGSMTIKKRGKVVEKFNDPESKDFIFMLS 573
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK FIYR LSTGTIEEK++
Sbjct: 574 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIF 633
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
QRQ K+ L + + D + S ++LRDLF +S+ H+ CTRC N
Sbjct: 634 QRQAHKKALSSTVVDNEEDVA----RHFSRDELRDLFKLETGTQSDTHDKFKCTRCMN 687
>gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex
echinatior]
Length = 681
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 292/662 (44%), Positives = 394/662 (59%), Gaps = 91/662 (13%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSG--LLNAAGIHGCILADDMGLGKTLQSIAL 228
LV + VDP+L LRPHQREGV+FM+ECV+G + NA +GCI+AD+MGLGKTLQ I L
Sbjct: 76 LVHVVVDPVLCNVLRPHQREGVKFMYECVTGKRIENA---YGCIMADEMGLGKTLQCITL 132
Query: 229 LYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
L+TLL QG + KP+++KA+IV P+SLV NW EI KW+ V +A+ + D+ + +
Sbjct: 133 LWTLLKQGPEAKPLIEKAVIVAPSSLVKNWYNEINKWLNNMVNTLAIDGGKKADIDTQLI 192
Query: 289 SFTDP---CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
F C + +LI+SYETFR+H+ E L++CDE HRLKN + T +
Sbjct: 193 RFMKTYGRCVT-PILIISYETFRLHAHVLHQDE-VGLVLCDEGHRLKNSENQTYQSLMGL 250
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL E+F++V+F N G+LG A FRR YET I+ G++ AT+ E+
Sbjct: 251 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATDAERT 310
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ ER S+L + VN+ ++RRT+ALLS +LP K VVC K+ LQ++LY +FI S ++KR
Sbjct: 311 VAQERLSDLVSIVNKCLIRRTSALLSKYLPLKHELVVCIKMGELQTQLYKNFIQSDSIKR 370
Query: 447 AISE-----ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++ E +T LA IT LKKLCNHP LIYD IK G E PP +S
Sbjct: 371 SMEENDNPKKTGSLSALAAITLLKKLCNHPDLIYDKIKEK---ADGLEKAASLLPPN-YS 426
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ ELSGK+ VL LL ++ T+D+IVLVSNYTQTLDLF +LC +R Y
Sbjct: 427 AKE--------LMPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKRSY 478
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
Y+RLDGT +I KR K+V++FN S N+F+F+LSSKAGGCGLNLIG NRLV+FDPDWNPA
Sbjct: 479 NYVRLDGTMTIKKRAKVVDNFNSDSSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 538
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
ND QA ARVWRDGQKK F+YRFLSTGTIEEK++QRQ K+ L + ++ D +
Sbjct: 539 NDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVA----R 594
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVT 741
+ DLRDLF ++ S+ H C RC N G E+ G ++++
Sbjct: 595 HFTINDLRDLFKLEENTVSDTHAKFKCKRCIN---GIEAKGPSEQSDC------------ 639
Query: 742 DIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFT 801
DL++W H +PD L+ ++FVF
Sbjct: 640 --------------------------NSDLSDWRHSHNPRHLPDIPLRQCWASGISFVFH 673
Query: 802 NQ 803
++
Sbjct: 674 HR 675
>gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca]
Length = 716
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 284/654 (43%), Positives = 387/654 (59%), Gaps = 84/654 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 111 VHVVVDPVLSKVLRPHQREGVKFLWECVTSR-RVPGSHGCIMADEMGLGKTLQCITLMWT 169
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + +P + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 170 LLRQSPECRPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 229
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 230 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 288
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N G+LG A F++++E I+ GR+ A+E +++LG
Sbjct: 289 RRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKHFELPILKGRDAAASEADRQLGE 348
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 349 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELR 408
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT LKKLCNHP LIYD GFE + FPP S
Sbjct: 409 EGKMSVSSLSSITLLKKLCNHPALIYDKCVEEE---DGFEGALEIFPPGYSS-------- 457
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 458 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 516
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+P +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 517 MSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 576
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 577 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEPDVE----RHFSLGELK 632
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+LFT + S+ H+ + C RC N
Sbjct: 633 ELFTLDEASLSDTHDRLRCRRCVNN----------------------------------- 657
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
H+++ + G+ DL W H+ + D +LQA +A +TFVF
Sbjct: 658 ----HQVRPAPD--GSDCTSDLAQWNHNTDKRGLKDEVLQAAWDAASTAITFVF 705
>gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Ailuropoda melanoleuca]
Length = 838
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 284/654 (43%), Positives = 387/654 (59%), Gaps = 84/654 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 232 VHVVVDPVLSKVLRPHQREGVKFLWECVTSR-RVPGSHGCIMADEMGLGKTLQCITLMWT 290
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + +P + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 291 LLRQSPECRPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 350
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 351 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 409
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N G+LG A F++++E I+ GR+ A+E +++LG
Sbjct: 410 RRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKHFELPILKGRDAAASEADRQLGE 469
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 470 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELR 529
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT LKKLCNHP LIYD GFE + FPP S
Sbjct: 530 EGKMSVSSLSSITLLKKLCNHPALIYDKCVEEE---DGFEGALEIFPPGYSS-------- 578
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 579 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 637
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+P +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 638 MSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 697
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 698 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEPDVE----RHFSLGELK 753
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+LFT + S+ H+ + C RC N
Sbjct: 754 ELFTLDEASLSDTHDRLRCRRCVNN----------------------------------- 778
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
H+++ + G+ DL W H+ + D +LQA +A +TFVF
Sbjct: 779 ----HQVRPAPD--GSDCTSDLAQWNHNTDKRGLKDEVLQAAWDAASTAITFVF 826
>gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa]
gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa]
Length = 755
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/613 (46%), Positives = 384/613 (62%), Gaps = 54/613 (8%)
Query: 150 PPGVDPLVLWQPEE-PQNDGGNL------VPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P LVL+ P E +D L V I VDP+L LRPHQREGV+FM++CV+G+
Sbjct: 101 PYAEGALVLFTPPELSAHDALKLDATNKQVHIVVDPMLSAILRPHQREGVKFMYDCVTGV 160
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
HGCI+AD+MGLGKTLQ I L++TLL QG D KP + KA+IV P+SLV NW+ EI
Sbjct: 161 -RIPSAHGCIMADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKAVIVCPSSLVKNWDKEI 219
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSE 318
+KW+GGRV + + +D++ ++ F C + VLI+SYETFR+H+S E
Sbjct: 220 RKWLGGRVNALPVDSGGKDEIDRNLEKFMSQMGVRCPT-PVLIISYETFRLHASILLQKE 278
Query: 319 SCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILG 359
L+ICDE HRLKN T + NDL E+++++NF NPG+LG
Sbjct: 279 -IGLIICDEGHRLKNSDNQTYQALFGLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLG 337
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A+ F+R +E I+ GR+ AT+ +++ G +E+S+ V++ ++RRT+ALL+ +LP K
Sbjct: 338 TASEFKRRFENIILRGRDADATDAQREKGDAALTEMSSIVSRCVIRRTSALLTKYLPVKY 397
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNV--KRAISEETKQS-KILAYITALKKLCNHPKLIYD 476
++CCKLT LQ +LY I + ++ K+ ++E K + L++IT LKKLCNHP+LI++
Sbjct: 398 ELIICCKLTELQEKLYRQLISTFSMGGKQKVTEGDKITGTALSFITNLKKLCNHPQLIFN 457
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
+ GFE C++ FP E G SGKM VL LL R T+
Sbjct: 458 KCQKKE---EGFEGCLKLFPGEF----------GRKFEPAFSGKMKVLDYLLAATRTTTN 504
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSS 596
D+ VLVSNYTQT+D F +LC+ RRYPY+RLDGT +I +R KLV FNDP E+VFLLSS
Sbjct: 505 DKFVLVSNYTQTIDAFVELCQLRRYPYIRLDGTCTIKQRAKLVEKFNDPKSVEYVFLLSS 564
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
KAGGCGLNLIG NRL++FDPDWNPAND QA ARVWRDGQ+K FIYR L++G+IEEK++Q
Sbjct: 565 KAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQRKNCFIYRLLASGSIEEKMFQ 624
Query: 657 RQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD 716
RQ K+ L + E +D + S + LR LF D+ S+ H ++ C RC N +
Sbjct: 625 RQAHKKALSSCVIDEASDVA----RHFSKDQLRHLFDLKADIASDTHHSLKCNRCVNGVE 680
Query: 717 GAESIGEGDETNS 729
E E D TNS
Sbjct: 681 YREPHEEAD-TNS 692
>gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus]
Length = 755
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/566 (48%), Positives = 364/566 (64%), Gaps = 44/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 149 VHVVVDPVLSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 207
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 208 LLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 267
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 268 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTR 326
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++LG
Sbjct: 327 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDAAASEADRQLGE 386
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL+ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 387 ERLRELTGVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELH 446
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP G
Sbjct: 447 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGALDIFPP-----------G 492
Query: 510 GDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+ +E LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLD
Sbjct: 493 YNSKAIEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLD 552
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT SI KR K+V FN P+ +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 553 GTMSIKKRAKVVERFNSPTSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 612
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +
Sbjct: 613 ARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGE 668
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LFT + S+ H+ +HC RC N
Sbjct: 669 LKELFTLEEASLSDTHDKLHCRRCVN 694
>gi|178056748|ref|NP_001116655.1| DNA repair and recombination protein RAD54-like [Sus scrofa]
gi|168084900|dbj|BAG09488.1| DNA repair protein RAD54 [Sus scrofa]
Length = 747
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 274/564 (48%), Positives = 363/564 (64%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPVLSKVLRPHQREGVRFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALNSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N G+LG A F++ +E I+ GR+ A+EE+++LG
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKRFELPILKGRDAAASEEDRRLGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 379 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD G G D FFPP S
Sbjct: 439 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFAGALD---FFPPGYSS-------- 487
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 488 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 546
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 547 MSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 606
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 607 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 662
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT + S+ H+ + C RC N
Sbjct: 663 ELFTLDEASLSDTHDRLRCRRCVN 686
>gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis]
Length = 749
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/622 (45%), Positives = 392/622 (63%), Gaps = 58/622 (9%)
Query: 150 PPGVDPLVLWQPEEPQ-------NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LV++ P E ++ LV + VDPLL LRPHQREGV+FM+ECV+G
Sbjct: 115 PDEPNALVVYAPPEMSEHESLKVDETKKLVHVVVDPLLCNVLRPHQREGVKFMYECVTGK 174
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ I LL+TLL QG + KP+++KAIIV P+SLV NW EI
Sbjct: 175 -RIEEAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEI 233
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSE 318
KW+ RV+ +A+ ++ ++ + + F C++ +LI+SYETFR+H+ +
Sbjct: 234 FKWLQNRVKPLAIDGGSKSEIDAKLTGFMKTYGRRCAT-PILIISYETFRLHAHVLH-QD 291
Query: 319 SCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILG 359
L++CDE HRLKN + T + NDL E+F++++F N G+LG
Sbjct: 292 DVGLVLCDEGHRLKNSENQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLIHFVNSGLLG 351
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
AA FR+ +E I+ G++ AT++E+++ ER +EL VN+ ++RRT+ALLS +LP K
Sbjct: 352 TAAEFRKKFENPILRGQDAGATDKERQIAQERLTELVTVVNKCLIRRTSALLSKYLPLKH 411
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK----ILAYITALKKLCNHPKLIY 475
VVC K+TPLQ++LY +FI S ++K+++ ++ K L+ IT LKKLCNHP L+Y
Sbjct: 412 ELVVCIKMTPLQTQLYKNFIKSDSIKKSMQDDGTAKKGSLSALSAITLLKKLCNHPDLVY 471
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
+ I+ + GFE + P +S + ELSGK+ VL LL ++ T
Sbjct: 472 EKIQEN---SDGFEGAAKLLPAN-YSTKE--------VMPELSGKLMVLDCLLAFIKSTT 519
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLS 595
D+IVLVSNYTQTLDLF +LC +R+Y Y+RLDGT SI KR K+V++FN+P +F+F+LS
Sbjct: 520 TDKIVLVSNYTQTLDLFERLCAKRKYKYVRLDGTMSIKKRAKVVDNFNNPDSGDFIFMLS 579
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCGLNL+G NRLV+FDPDWNPAND QA ARVWRDGQKK F+YRFL TGTIEEK++
Sbjct: 580 SKAGGCGLNLVGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLCTGTIEEKIF 639
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
QRQ K+ L + + D + + DLRDLF+ + S+ H C RC N
Sbjct: 640 QRQAHKKALSSTVVDQDEDVA----RHFTQNDLRDLFSLEESTVSDTHSKFKCKRCIN-- 693
Query: 716 DGAESIGEGDETNSANKNDQSD 737
G E +G NS +D SD
Sbjct: 694 -GIEV--KGPPENSDCTSDLSD 712
>gi|403291754|ref|XP_003936932.1| PREDICTED: DNA repair and recombination protein RAD54-like [Saimiri
boliviensis boliviensis]
Length = 747
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/590 (47%), Positives = 373/590 (63%), Gaps = 49/590 (8%)
Query: 154 DPLVLWQPEEPQNDGGNL--------VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
D LVL++P P + L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPP-PLSAHDQLKLDKEKFPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RI 173
Query: 206 AGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 265
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW
Sbjct: 174 PGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKW 233
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDL 322
+GGR+Q +A+ ++D++ ++ F + + +LI+SYETFR+H S L
Sbjct: 234 LGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQ-KGSVGL 292
Query: 323 LICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAY 363
+ICDE HRLKN + T + NDL E+F++V+F N GILG A
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 352
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VV
Sbjct: 353 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
CC+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LIYD
Sbjct: 413 CCRLTPLQTELYKRFLRQAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVEQE- 471
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
GFE + FPP S +LSGKM VL +L R R+ D++VLVS
Sbjct: 472 --DGFEGALDLFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVS 520
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
NYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGL
Sbjct: 521 NYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGL 580
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+
Sbjct: 581 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA 640
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
L + E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 641 LSSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|195116621|ref|XP_002002852.1| GI10760 [Drosophila mojavensis]
gi|292630864|sp|B4KHL5.1|RAD54_DROMO RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|193913427|gb|EDW12294.1| GI10760 [Drosophila mojavensis]
Length = 783
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/641 (44%), Positives = 397/641 (61%), Gaps = 57/641 (8%)
Query: 103 DQLARRLCARKRFVPWGSSRPVLVTITNR-LDLPRTVENNVIEENFTLPPGVDPLVLWQP 161
+Q ++ ARK VP + P NR L + RT+ + + P + LVL+ P
Sbjct: 66 EQAIAKVLARKFKVPIANYVPDYGG--NRTLGVRRTIVRRALHD----PQACNALVLYVP 119
Query: 162 ------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
E D + V + VDP+L LRPHQREGV+FM+ECV G +GCI+A
Sbjct: 120 PAYTEHERMSMDPSKVQVHVVVDPILSNVLRPHQREGVRFMYECVEG--KRGNFNGCIMA 177
Query: 215 DDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
D+MGLGKTLQ + L +TLL Q D KP + KAIIV+P+SLV NWE E KW+ GR+ +A
Sbjct: 178 DEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIIVSPSSLVKNWEKEFTKWLHGRMHCLA 237
Query: 275 LCESTRDDVVSGIDSF---TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
+ +++D ++ F T VL++SYETFR+++ C ++ICDE HRL
Sbjct: 238 MEGGSKEDTTRALEQFAMNTATRCGTPVLLISYETFRLYAHIL-CKTEVGMVICDEGHRL 296
Query: 332 KNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN LT + NDL E+F++VNF NP +LG AA F+R +E SI
Sbjct: 297 KNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSI 356
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
+ G+ +T+ E++ ++++ EL VNQ I+RRTN +L+ +LP K VVC KLTP+Q
Sbjct: 357 LRGQNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCVKLTPVQL 416
Query: 433 ELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
++Y +F+ S V+R++++ +++ + LA IT LKKLCNHP LIY+ I + GFE+
Sbjct: 417 QIYTNFLKSDQVRRSLADCNEKASLTALADITTLKKLCNHPDLIYEKIAAKE---KGFEN 473
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
PP ++ D ELSGK +L +L +R +DD++VL+SNYTQTLD
Sbjct: 474 SQNVLPP--------NYKPKD-VNPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLD 524
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
LF QL R+R+Y Y+RLDGT +I KR K+V+ FNDPS + F+F+LSSKAGGCGLNLIG NR
Sbjct: 525 LFEQLARKRKYTYVRLDGTMTIKKRSKVVDRFNDPSTDCFLFMLSSKAGGCGLNLIGANR 584
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L +FDPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ K+ L I
Sbjct: 585 LFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTI-- 642
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
D++ + + +DL+DLF+F +V S+ H + C RC
Sbjct: 643 --IDNNESSEKHFTRDDLKDLFSFEANVLSDTHNKLKCKRC 681
>gi|426215442|ref|XP_004001981.1| PREDICTED: DNA repair and recombination protein RAD54-like [Ovis
aries]
Length = 749
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/564 (48%), Positives = 365/564 (64%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F+++CV+G G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 142 VHVVVDPILSKVLRPHQREGVEFLWKCVTGR-RIPGSHGCIMADEMGLGKTLQCITLMWT 200
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 201 LLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 260
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 261 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 319
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+EE++++G
Sbjct: 320 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEEDRRVGE 379
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ ELY F+ +
Sbjct: 380 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQIELYKRFLRQAKPAEELR 439
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP S
Sbjct: 440 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGTLDIFPPGYNS-------- 488
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 489 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 547
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 548 MSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 607
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 608 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 663
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT + S+ H+ + C RC N
Sbjct: 664 ELFTLDEANLSDTHDRLRCRRCVN 687
>gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti]
gi|108881922|gb|EAT46147.1| AAEL002647-PA [Aedes aegypti]
Length = 791
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 306/757 (40%), Positives = 420/757 (55%), Gaps = 109/757 (14%)
Query: 121 SRPVLVTITNR--------LDLPRTVENNVIEENFTLPPGVDPLVLWQPEEP------QN 166
SRP V I N L + R + + F + LVL+ PEE ++
Sbjct: 66 SRPFKVPIANYVPEHTTRCLGMKRPAARRALHDPF----ACNALVLYTPEELTEHDKLKS 121
Query: 167 DGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
D G + V + VDPLL LRPHQREGV+FM+ECV+G GCI+AD+MGLGKTLQ
Sbjct: 122 DPGKIQVHVMVDPLLGNILRPHQREGVRFMYECVTG--KRGDFQGCIMADEMGLGKTLQC 179
Query: 226 IALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
I LL+TLL Q D KP + KA+IV P+SLV NW E KW+G RV +A+ +++
Sbjct: 180 ITLLWTLLRQSPDCKPTINKAVIVCPSSLVKNWYKEFGKWLGCRVNCLAIDGGSKEHTTK 239
Query: 286 GIDSFTDPCSSLQ---VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-- 340
++ F S VLI+SYETFR++S + SE ++CDE HRLKN + LT +
Sbjct: 240 ELEQFMANQSMRHGTPVLIISYETFRLYSHILNNSE-VGAVLCDEGHRLKNCENLTYQAL 298
Query: 341 -----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
NDL E++++++F NPG+LG FRR +E I+ G++ ATE
Sbjct: 299 MGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTNEFRRQFENPILRGQDANATES 358
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E++ ER EL+A+VN+ ++RRT+ALL+ +LP K VVC K+T +Q+ELY F+ S +
Sbjct: 359 ERQKATERLQELTAQVNRCMIRRTSALLTKYLPIKFEMVVCVKMTEIQTELYKSFLQSDS 418
Query: 444 VKRAISEETKQSK---ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF 500
++R++ E+ + L+ IT+LKKLCNHP L+Y+ I+ GFE+ + P
Sbjct: 419 IRRSMLEKAQVKASLTALSNITSLKKLCNHPDLVYEKIQER---ADGFENAHKILPSNYS 475
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
S E GK+ VL +L ++ TDD+IVLVSNYTQTLDLF +LCR+R
Sbjct: 476 SKELRP---------EFGGKLMVLDCMLASIKMNTDDKIVLVSNYTQTLDLFEKLCRKRG 526
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y Y+RLDG+ +I KR K+V+ FN P EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNP
Sbjct: 527 YCYVRLDGSMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 586
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
AND+QA ARVWRDGQKK FIYR L+TGTIEEK++QRQ K+ L + D
Sbjct: 587 ANDEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKALSNTVVDNDEDGE---- 642
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEV 740
+ +DL+DLF + S+ H C RC N N K D +
Sbjct: 643 RHFTQDDLKDLFRLDESTISDTHSKFKCKRCVN--------------NIQMKLPPEDSDC 688
Query: 741 TDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQAS--AGDEVTF 798
T DL++W H + +PD IL S V+F
Sbjct: 689 TS---------------------------DLSHWYHCSNNKGIPDDILSKSWDMTKCVSF 721
Query: 799 VFTNQVDGKLVP---IESKVSPKMQATEGNKNPNNHI 832
VF ++ + +V E K + ++ +G K H+
Sbjct: 722 VFHHRSNSAVVEQQIAEQKRAEALKGKDGKKGDEEHV 758
>gi|296207850|ref|XP_002750833.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Callithrix jacchus]
Length = 746
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/590 (47%), Positives = 373/590 (63%), Gaps = 49/590 (8%)
Query: 154 DPLVLWQPEEPQNDGGNL--------VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
D LVL++P P + L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 115 DALVLYEPP-PLSAHDQLKLDKEKFPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RI 172
Query: 206 AGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 265
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW
Sbjct: 173 PGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKW 232
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDL 322
+GGR+Q +A+ ++DD+ ++ F + + +LI+SYETFR+H S L
Sbjct: 233 LGGRIQPLAIDGGSKDDIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQ-KGSVGL 291
Query: 323 LICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAY 363
+ICDE HRLKN + T + NDL E+F++V+F N GILG A
Sbjct: 292 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 351
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VV
Sbjct: 352 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 411
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
CC+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 412 CCRLTPLQTELYKRFLRQAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIHDKCVEGE- 470
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
GFE + FPP S +LSGKM VL +L R + D++VLVS
Sbjct: 471 --DGFEGALDLFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSCSSDKVVLVS 519
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
NYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGL
Sbjct: 520 NYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGL 579
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+
Sbjct: 580 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA 639
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
L + E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 640 LSSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 685
>gi|201066350|ref|NP_001128432.1| DNA repair and recombination protein RAD54-like [Rattus norvegicus]
gi|197246624|gb|AAI69034.1| Rad54l protein [Rattus norvegicus]
Length = 748
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/566 (48%), Positives = 368/566 (65%), Gaps = 44/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H + L+ICDE HRLKN + T +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVEVLK-KGNVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++LG
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQLGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + +
Sbjct: 379 ERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELH 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD + GFE + FPP G
Sbjct: 439 EGKMSVSSLSSITSLKKLCNHPALIYDKCVAEE---DGFEGTLGIFPP-----------G 484
Query: 510 GDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+ VE LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLD
Sbjct: 485 YNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLD 544
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 545 GTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 604
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +
Sbjct: 605 ARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGE 660
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LFT + S+ H+ +HC RC N
Sbjct: 661 LKELFTLDEASLSDTHDRLHCRRCVN 686
>gi|440907311|gb|ELR57471.1| DNA repair and recombination protein RAD54-like protein, partial
[Bos grunniens mutus]
Length = 749
Score = 521 bits (1341), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/564 (48%), Positives = 364/564 (64%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 142 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 200
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 201 LLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 260
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 261 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 319
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+EE++++G
Sbjct: 320 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEEDRRVGE 379
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ ELY F+ +
Sbjct: 380 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQIELYKRFLRQAKPAEELR 439
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP S
Sbjct: 440 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGTLDIFPPGYNS-------- 488
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 489 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 547
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 548 MSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 607
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 608 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 663
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT + S+ H+ + C RC N
Sbjct: 664 ELFTLDEAKLSDTHDRLRCRRCVN 687
>gi|216548186|ref|NP_003570.2| DNA repair and recombination protein RAD54-like [Homo sapiens]
gi|216548193|ref|NP_001136020.1| DNA repair and recombination protein RAD54-like [Homo sapiens]
gi|51316508|sp|Q92698.2|RAD54_HUMAN RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=RAD54 homolog; Short=hHR54; Short=hRAD54
gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|111307699|gb|AAI21061.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|111309424|gb|AAI21060.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|119627335|gb|EAX06930.1| RAD54-like (S. cerevisiae), isoform CRA_b [Homo sapiens]
Length = 747
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/589 (47%), Positives = 374/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + S +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LIYD G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R R+ D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|1495483|emb|CAA66379.1| RAD54 [Homo sapiens]
Length = 747
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/589 (47%), Positives = 374/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + S +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LIYD G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R R+ D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|328705070|ref|XP_001948023.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Acyrthosiphon pisum]
Length = 751
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 281/602 (46%), Positives = 367/602 (60%), Gaps = 58/602 (9%)
Query: 150 PPGVDPLVLWQPEEPQNDGGN---------LVPITVDPLLVRFLRPHQREGVQFMFECVS 200
P D L+L+ P PQ + LV + VDP L + LRPHQREGV+FM+ECV+
Sbjct: 93 PTAPDALILYIP--PQISAHDILKMDKDKILVNVVVDPALSKILRPHQREGVKFMYECVT 150
Query: 201 GLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEA 260
G+ G +GCI+AD+MGLGKTLQ I L++TLL QG D P + KAIIVTP+SLV NW
Sbjct: 151 GV-RIEGAYGCIMADEMGLGKTLQCITLMWTLLKQGPDASPTIHKAIIVTPSSLVKNWCN 209
Query: 261 EIKKWVGGRVQLIALCESTRDDVVSGIDSFT--------DPCSSLQVLIVSYETFRMHSS 312
EIKKW+GGR+ + + ++ V I F DP +L++SYETFR H+S
Sbjct: 210 EIKKWLGGRIGALPVDGGGKEQVDKVITGFVQARGRRTVDP-----ILVISYETFRSHAS 264
Query: 313 KFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFT 353
+E L++CDE HRLKN + T R NDL E+F++V+F
Sbjct: 265 LLQNAEDIGLVLCDEGHRLKNCENQTYRSLMALKAKRRVLLSGTPIQNDLLEYFSLVHFV 324
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
N GILG A FRR YET I+ G++ AT+ E+K ER +L + VN+ ++RRT+ALLS
Sbjct: 325 NEGILGTAQEFRRQYETPIVRGQDSCATDSERKKAAERLEQLISLVNRCLIRRTSALLSK 384
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI--SEETKQSKILAYITALKKLCNHP 471
+LP K VVC KLTPLQ++LY H + S V ++I ++ S LA IT LKKLC HP
Sbjct: 385 YLPVKTEHVVCIKLTPLQTDLYLHLLKSDMVTKSIKGNDGKVTSNALAAITLLKKLCAHP 444
Query: 472 KLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL 531
LI D I +G + GFE+ PP + S +ELS K+ VL +L +
Sbjct: 445 DLIIDKIMNG---SDGFENSKHLLPPTYIAAHSKK-----KLMIELSSKLMVLDTMLAVI 496
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV 591
+ T DR+VL+SNYTQTL+LF +L + R Y ++RLDG+ + KR K V+ N P+ F+
Sbjct: 497 KTTTTDRVVLISNYTQTLELFERLAKLRNYTFVRLDGSMTAKKRAKAVDDINSPTSGVFL 556
Query: 592 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIE 651
F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK F+YRFL+TG+IE
Sbjct: 557 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLATGSIE 616
Query: 652 EKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
EK+ QRQ K+ L + D + +LR LF D S+ HE + CTRC
Sbjct: 617 EKMMQRQAHKKALSSSV----VDCEEDVARHFTVSELRTLFNLRQDTISDTHEKIKCTRC 672
Query: 712 QN 713
N
Sbjct: 673 IN 674
>gi|195539537|ref|NP_001124238.1| DNA repair and recombination protein RAD54-like [Bos taurus]
gi|119935983|gb|ABM06051.1| RAD54-like protein [Bos taurus]
gi|296488837|tpg|DAA30950.1| TPA: RAD54-like [Bos taurus]
Length = 749
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/564 (48%), Positives = 364/564 (64%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 142 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 200
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 201 LLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 260
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 261 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 319
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+EE++++G
Sbjct: 320 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEEDRRVGE 379
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ ELY F+ +
Sbjct: 380 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQIELYKRFLRQAKPAEELR 439
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP S
Sbjct: 440 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGTLDIFPPGYNS-------- 488
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 489 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 547
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 548 MSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 607
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 608 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 663
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT + S+ H+ + C RC N
Sbjct: 664 ELFTLDEAKLSDTHDRLRCRRCVN 687
>gi|431896848|gb|ELK06112.1| DNA repair and recombination protein RAD54-like protein [Pteropus
alecto]
Length = 761
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 289/654 (44%), Positives = 385/654 (58%), Gaps = 84/654 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 155 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLIWT 213
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 214 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 273
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 274 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 332
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ ATE +++LG
Sbjct: 333 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAYEFKKHFELPILKGRDAAATEADRQLGE 392
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP K +VVCC+LTPLQ+ELY F+ +
Sbjct: 393 ERLRELTSIVNRCLIRRTSDILSKYLPVKFEQVVCCRLTPLQTELYQRFLRQAKPADELR 452
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP S
Sbjct: 453 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGTLDIFPPGYSSKTIAP--- 506
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 507 ------QLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 560
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 561 MSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 620
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 621 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 676
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+LFT + S+ H+ + C+RC N N Q Q
Sbjct: 677 ELFTLDEASLSDTHDRLRCSRCVN-------------------NHQVRQPPD-------- 709
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
G+ DL W H + D +LQA +A +TFVF
Sbjct: 710 --------------GSDCTSDLAQWNHSTDKRGLKDEVLQAAWDAATTAITFVF 749
>gi|395537346|ref|XP_003770664.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Sarcophilus harrisii]
Length = 822
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 288/622 (46%), Positives = 390/622 (62%), Gaps = 49/622 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+G G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 219 VHVVVDPILSKILRPHQREGVKFLWECVTGR-RIPGSHGCIMADEMGLGKTLQCITLMWT 277
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ +++++ + SF
Sbjct: 278 LLRQSPESKPEIDKAVVVSPSSLVRNWSNEVHKWLGGRIQPLAIDGGSKEEIDQKLGSFM 337
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ S +LI+SYETFR+H+ S L+ICDE HRLKN + T +
Sbjct: 338 NQRGSRVPSPILIISYETFRLHAEALQ-RGSVGLVICDEGHRLKNSENQTYQALNSLNTS 396
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F+R++E I+ GR+ A+E ++ G
Sbjct: 397 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAARQKGE 456
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 457 ERLRELVGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYRRFLQQAKPAEELR 516
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIY+ G +G D FPP +S +S
Sbjct: 517 EGKMSVSSLSSITSLKKLCNHPGLIYEKCVEEEEGFSGTLD---LFPPG-YSCKS----- 567
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R+ + D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 568 ---VEPQLSGKMLVLDYILAVTRRTSSDKVVLVSNYTQTLDLFEKLCRLRRYLYVRLDGT 624
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+PS +F+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 625 MSIKKRAKVVERFNNPSSPDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 684
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +LR
Sbjct: 685 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQTHKKALSSCVVDEEQDVE----RHFSLGELR 740
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN------YDDGAESIGE-GDETNSANKNDQSDQEVTD 742
+LFT ++ S+ H+ + C RC N DG++ + +SA+K SD EV
Sbjct: 741 ELFTLNEVTPSDTHDKLRCRRCVNGRQVRPPPDGSDCTSDLAQWHHSADKRGLSD-EVLL 799
Query: 743 IGGFAGLAGCLHKLKSSEKQLG 764
A + H+ +S E+Q G
Sbjct: 800 AAWDAAVTFAFHQ-RSHEEQRG 820
>gi|332808861|ref|XP_513146.3| PREDICTED: DNA repair and recombination protein RAD54-like isoform
2 [Pan troglodytes]
Length = 747
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/589 (47%), Positives = 374/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + S +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELLESKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R R+ D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|432111345|gb|ELK34622.1| DNA repair and recombination protein RAD54-like protein [Myotis
davidii]
Length = 747
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 288/656 (43%), Positives = 388/656 (59%), Gaps = 88/656 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F+++CV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWDCVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H+ S L+ICDE HRLKN + T +
Sbjct: 260 NQRGARVPSPILIISYETFRLHAGVLR-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+E E++LG
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEAERQLGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 379 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYQRFLRQAKPAEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP G
Sbjct: 439 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGALDIFPP-----------G 484
Query: 510 GDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+E LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLD
Sbjct: 485 YSSKVLEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLD 544
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 545 GTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 604
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +
Sbjct: 605 ARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGE 660
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFA 747
L++LFT + S+ H+ + C RC N
Sbjct: 661 LKELFTLDEASLSDTHDRLRCRRCVNN--------------------------------- 687
Query: 748 GLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
H+++ G+ DL W H + D +LQA +A +TFVF
Sbjct: 688 ------HQIRPPPD--GSDCTSDLAQWNHSTDKRGLRDEVLQAAWDAASTAITFVF 735
>gi|426329478|ref|XP_004025767.1| PREDICTED: DNA repair and recombination protein RAD54-like [Gorilla
gorilla gorilla]
Length = 747
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 278/589 (47%), Positives = 375/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + + +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R R+ D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS ++FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSSDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|410261060|gb|JAA18496.1| RAD54-like [Pan troglodytes]
gi|410351929|gb|JAA42568.1| RAD54-like [Pan troglodytes]
Length = 747
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/589 (47%), Positives = 374/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + S +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R R+ D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|410967175|ref|XP_003990097.1| PREDICTED: DNA repair and recombination protein RAD54-like [Felis
catus]
Length = 747
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/657 (43%), Positives = 384/657 (58%), Gaps = 84/657 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+ GR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLAGRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 260 NQRGTRVPSPILIISYETFRLHVGILQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++LG
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQLGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
+R EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LT LQ+ELY F+ +
Sbjct: 379 DRLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTSLQTELYKKFLRQAKPAEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT LKKLCNHP LIYD GFE + FPP S
Sbjct: 439 EGKMSVSSLSSITLLKKLCNHPALIYDKCVEEE---GGFEGALEIFPPGYSS-------- 487
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 488 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 546
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+P +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 547 MSIKKRAKIVERFNNPLSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 606
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 607 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 662
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+LFT + S+ H+ + C RC N
Sbjct: 663 ELFTLDEASLSDTHDRLRCCRCVNN----------------------------------- 687
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVFTNQ 803
H+++ G+ DL W H+ + D +LQA +A +TFVF Q
Sbjct: 688 ----HQVRPPPD--GSDCTSDLAQWNHNTDKRGLKDEVLQAAWDAASTAITFVFHQQ 738
>gi|158258659|dbj|BAF85300.1| unnamed protein product [Homo sapiens]
Length = 747
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/589 (47%), Positives = 373/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + S +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LIYD G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R R+ D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++L + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELLILDEASLSDTHDRLHCRRCVN 686
>gi|321465306|gb|EFX76308.1| RAD54, DNA repair and recombination protein [Daphnia pulex]
Length = 748
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 292/659 (44%), Positives = 390/659 (59%), Gaps = 87/659 (13%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L + LRPHQREGV+FM++CV+GL +GCI+AD+MGLGKTLQ I LL+TLL QG D
Sbjct: 149 LTKVLRPHQREGVKFMYDCVTGLC-IENNYGCIMADEMGLGKTLQCITLLWTLLKQGPDC 207
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSS--- 296
KP++ K IIV+P+SLV NW+ EI KW+ GRV + + ++D++ ++ F
Sbjct: 208 KPLIAKGIIVSPSSLVKNWQNEINKWLSGRVNTLVIDSGSKDEIDRNLNGFIHTHGRRVV 267
Query: 297 LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------------- 340
VLI+SYETFR+H+ E L++CDE HRLKN + T +
Sbjct: 268 TPVLIISYETFRLHAHALHKGE-IGLVLCDEGHRLKNSENQTYQALVALNCKRRVLLSGT 326
Query: 341 ---NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
NDL E+F++++F N GILG A F++ +ET I+ GR+ ATEE +K G + EL+
Sbjct: 327 PIQNDLLEYFSLLHFVNQGILGTAQEFKKRFETPILRGRDADATEETQKKGQTQLKELAD 386
Query: 398 KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK---RAISEETKQ 454
VN+ I+RRT+ALL+ +LP KI VVC KL+P+Q+ +Y + S+ VK R +E+ +
Sbjct: 387 LVNKCIIRRTSALLTKYLPVKIELVVCIKLSPVQASIYKKVVASEAVKSKMREANEKPSK 446
Query: 455 SKI--LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
S + LA IT LKKLC+HP+L+Y+ +SG GFE + FP F R
Sbjct: 447 SSMTALAAITNLKKLCSHPELVYEKCQSG---VDGFEGTLSLFP-ATFDPRK-------- 494
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
ELSGK+ VL +L ++ T+D+IVL+SNYTQTLDLF +LCR R YP +RLDG+ SI
Sbjct: 495 LQTELSGKLCVLDCILAMVKSTTNDKIVLISNYTQTLDLFEKLCRMRSYPCVRLDGSMSI 554
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR K+V HFNDP+ ++FVFLLSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWR
Sbjct: 555 KKRAKIVEHFNDPASSDFVFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 614
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
DGQKK FIYR LSTGTIEEK++QRQ K+ L + + D S DLRDLF
Sbjct: 615 DGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSCVVDNEDDVE----RHFSLSDLRDLF 670
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
+ S+ H+ C RC N I + A N
Sbjct: 671 KLEELTSSDTHDKFKCRRCVN------RIQVKPPPDDATCN------------------- 705
Query: 753 LHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQV-DGKLVP 810
DL+ W H ++PD +L+++ VTF F + + K+VP
Sbjct: 706 ----------------SDLSQWNHCADRKTIPDPVLKSAWDAGVTFAFHQKSHEPKIVP 748
>gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus
floridanus]
Length = 682
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 288/661 (43%), Positives = 390/661 (59%), Gaps = 88/661 (13%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDP+L LRPHQREGV+FM+ECV+G +GCI+AD+MGLGKTLQ I LL+
Sbjct: 76 LVHVVVDPILCNVLRPHQREGVKFMYECVTGK-RIENAYGCIMADEMGLGKTLQCITLLW 134
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
TLL QG + KP++ KAIIV P+SLV NW EI KW+ V +A+ + ++ + + F
Sbjct: 135 TLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEINKWLNNIVNTLAIDGGKKAEIDTKLLRF 194
Query: 291 TDP----CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
C + +LI+SYETFR+H+ E L++CDE HRLKN + T +
Sbjct: 195 MKTYGGRCVT-PILIISYETFRLHAHVLHQDE-VGLVLCDEGHRLKNSENQTYQSLMGLK 252
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDL E+F++V+F N G+LG A FRR YET I+ G++ AT++++KL
Sbjct: 253 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATDDQRKL 312
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
ER S+L + VN+ ++RRT+ALLS +LP K VVC K+ LQ+ LY +FI S+++KR+
Sbjct: 313 AQERLSDLVSVVNKCLIRRTSALLSKYLPLKHEFVVCIKMGELQTRLYKNFIQSESIKRS 372
Query: 448 ISEETKQSK-----ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
+ E+ K LA IT LKKLCNHP LIYD I + GFE + P
Sbjct: 373 MEEDDNPKKGGHLSALAAITLLKKLCNHPDLIYDKIMEK---SEGFEKAAQLLP------ 423
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
S ELSGK+ VL LL ++ T+D+IVLVSNYTQTLDLF +LC +R Y
Sbjct: 424 ---SHYSTKQLLPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCNKRSYN 480
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
Y+RLDG+ +I KR K+V +FN + ++F+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAN
Sbjct: 481 YVRLDGSMTIKKRSKVVENFNSDTSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 540
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA ARVWRDGQKK F+YRFLSTGTIEEK++QRQ K+ L + ++ D +
Sbjct: 541 DDQAMARVWRDGQKKTCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVA----RH 596
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTD 742
+ DLRDLF + S+ H+ CTRC N G E G ++++
Sbjct: 597 FTINDLRDLFKLEQNTVSDTHDKFKCTRCVN---GIEVKGPPEQSDC------------- 640
Query: 743 IGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTN 802
DL+ W H ++PD L+ ++FVF +
Sbjct: 641 -------------------------NSDLSEWRHSHNPRNLPDISLRQCWASGISFVFHH 675
Query: 803 Q 803
+
Sbjct: 676 R 676
>gi|171906595|ref|NP_033041.3| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|171906597|ref|NP_001116430.1| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|171906599|ref|NP_001116431.1| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|51316197|sp|P70270.2|RAD54_MOUSE RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=RAD54 homolog; Short=mHR54; Short=mRAD54
gi|148698674|gb|EDL30621.1| RAD54 like (S. cerevisiae) [Mus musculus]
Length = 747
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/566 (48%), Positives = 366/566 (64%), Gaps = 44/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H + L+ICDE HRLKN + T +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLK-KGNVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++ G
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + +
Sbjct: 379 ERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD + GFE + FPP G
Sbjct: 439 EGKMSVSSLSSITSLKKLCNHPALIYDKCVAEE---DGFEGTLGIFPP-----------G 484
Query: 510 GDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+ VE LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLD
Sbjct: 485 YNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLYVRLD 544
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 545 GTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 604
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +
Sbjct: 605 ARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGE 660
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LFT + S+ H+ +HC RC N
Sbjct: 661 LKELFTLDEASLSDTHDRLHCRRCVN 686
>gi|20987234|gb|AAH21643.1| RAD54 like (S. cerevisiae) [Mus musculus]
Length = 747
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/566 (48%), Positives = 366/566 (64%), Gaps = 44/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H + L+ICDE HRLKN + T +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLK-KGNVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++ G
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + +
Sbjct: 379 ERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD + GFE + FPP G
Sbjct: 439 EGKMSVSSLSSITSLKKLCNHPALIYDKCVAEE---DGFEGTLGIFPP-----------G 484
Query: 510 GDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+ VE LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLD
Sbjct: 485 YNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLYVRLD 544
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 545 GTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 604
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +
Sbjct: 605 ARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGE 660
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LFT + S+ H+ +HC RC N
Sbjct: 661 LKELFTLDEASLSDTHDRLHCRRCVN 686
>gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus]
Length = 747
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/566 (48%), Positives = 366/566 (64%), Gaps = 44/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPVLSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H + L+ICDE HRLKN + T +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLK-KGNVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++ G
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + +
Sbjct: 379 ERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD + GFE + FPP G
Sbjct: 439 EGKMSVSSLSSITSLKKLCNHPALIYDKCVAEE---DGFEGTLGIFPP-----------G 484
Query: 510 GDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+ VE LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLD
Sbjct: 485 YNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLYVRLD 544
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 545 GTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 604
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +
Sbjct: 605 ARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGE 660
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LFT + S+ H+ +HC RC N
Sbjct: 661 LKELFTLDEASLSDTHDRLHCRRCVN 686
>gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus]
Length = 747
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/566 (48%), Positives = 366/566 (64%), Gaps = 44/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 199
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 200 LLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H + L+ICDE HRLKN + T +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLK-KGNVGLVICDEGHRLKNSENQTYQALDSLNTS 318
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++ G
Sbjct: 319 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGE 378
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + +
Sbjct: 379 ERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELR 438
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD + GFE + FPP G
Sbjct: 439 EGKMSVSSLSSITSLKKLCNHPALIYDKCVAEE---DGFEGTLGIFPP-----------G 484
Query: 510 GDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+ VE LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLD
Sbjct: 485 YNSKAVEPQLSGKMLVLDYVLAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLYVRLD 544
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 545 GTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 604
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +
Sbjct: 605 ARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGE 660
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LFT + S+ H+ +HC RC N
Sbjct: 661 LKELFTLDEASLSDTHDRLHCRRCVN 686
>gi|292630953|sp|B4NXB8.2|RAD54_DROYA RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
Length = 784
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 269/592 (45%), Positives = 382/592 (64%), Gaps = 49/592 (8%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN----LVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P E + G + LV + VDPLL LRPHQREGV+FM+ECV G
Sbjct: 115 PVACNALVLFNPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG- 173
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E
Sbjct: 174 -KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF 232
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESC 320
KW+ GR+ + + T+++ + ++ F+ S L VL++SYETFR+++ + C
Sbjct: 233 TKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVLLISYETFRIYA-EILCKYEV 291
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
++ICDE HRLKN LT + NDL E++++VNF NP +LG A
Sbjct: 292 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTA 351
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F+R +E++I+ G+ +TE E++ IE++ EL V+Q I+RRTN +L+ +LP K
Sbjct: 352 AVFKRNFESAILRGQNTDSTEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEM 411
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIK 479
V+C KLT +Q ELY +F+ S V+R++++ +++ + LA IT LKK+C+HP LIY+ I
Sbjct: 412 VICAKLTSIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKIT 471
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
+ GFE+ P ++ D ELSGK +L +L +R +D++
Sbjct: 472 ARE---KGFENSQNVLP--------SNYNTKDLN-PELSGKFMLLDFMLAAIRADGNDKV 519
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+ FNDP + F+F+LSSKAG
Sbjct: 520 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAG 579
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ
Sbjct: 580 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQT 639
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L I D++ + + +DL+DLFTF D+ S+ HE + C RC
Sbjct: 640 HKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDADILSDTHEKLKCKRC 687
>gi|195470937|ref|XP_002087763.1| GE14966 [Drosophila yakuba]
gi|194173864|gb|EDW87475.1| GE14966 [Drosophila yakuba]
Length = 772
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 269/592 (45%), Positives = 382/592 (64%), Gaps = 49/592 (8%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN----LVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P E + G + LV + VDPLL LRPHQREGV+FM+ECV G
Sbjct: 103 PVACNALVLFNPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG- 161
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E
Sbjct: 162 -KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF 220
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESC 320
KW+ GR+ + + T+++ + ++ F+ S L VL++SYETFR+++ + C
Sbjct: 221 TKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVLLISYETFRIYA-EILCKYEV 279
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
++ICDE HRLKN LT + NDL E++++VNF NP +LG A
Sbjct: 280 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTA 339
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F+R +E++I+ G+ +TE E++ IE++ EL V+Q I+RRTN +L+ +LP K
Sbjct: 340 AVFKRNFESAILRGQNTDSTEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEM 399
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIK 479
V+C KLT +Q ELY +F+ S V+R++++ +++ + LA IT LKK+C+HP LIY+ I
Sbjct: 400 VICAKLTSIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKIT 459
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
+ GFE+ P ++ D ELSGK +L +L +R +D++
Sbjct: 460 ARE---KGFENSQNVLP--------SNYNTKDLN-PELSGKFMLLDFMLAAIRADGNDKV 507
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+ FNDP + F+F+LSSKAG
Sbjct: 508 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAG 567
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ
Sbjct: 568 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQT 627
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L I D++ + + +DL+DLFTF D+ S+ HE + C RC
Sbjct: 628 HKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDADILSDTHEKLKCKRC 675
>gi|17508659|ref|NP_492438.1| Protein RAD-54 [Caenorhabditis elegans]
gi|6580248|emb|CAA22254.2| Protein RAD-54 [Caenorhabditis elegans]
Length = 818
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 270/595 (45%), Positives = 376/595 (63%), Gaps = 49/595 (8%)
Query: 156 LVLWQPE------EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
L+L+ PE + + D V + DP++ + LRPHQR+GV+FM++CV+G+ N H
Sbjct: 168 LILYAPEHLSEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGI-NIPEFH 226
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCI+AD+MGLGKTLQ I+LL+TLL Q D P V K+IIV P+SLV NW+ EIKKW+G R
Sbjct: 227 GCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTR 286
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
+ + + R+ +++ ++SF ++ VLI+SYETFR++++ S ++ICD
Sbjct: 287 LNAMPVDSGKREQIIACLNSFMADSKMRCAIPVLIISYETFRLYANILH-SGDVGIVICD 345
Query: 327 EAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLKN + LT + NDL E+F++VNF NPG+LG A+ FR+
Sbjct: 346 EGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKK 405
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+E +I+ GR+ A+ E++K G E++ E+ + V + I+RRT+ALL+ +LP K ++CCK
Sbjct: 406 FENAILKGRDADASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKN 465
Query: 428 TPLQSELYNHFIHSKNVKRAISEET-KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+ LQ LYN I + R + ++ + L++IT LKKLCNHP L+YD + P
Sbjct: 466 STLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQ--KPDNR 523
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
C+ FP E F+ +S + SGKM VL +L R+ TDD+ VLVSNYT
Sbjct: 524 FRNKCLSIFP-ESFNPKSFDPS--------FSGKMKVLDYILAVTRKTTDDKFVLVSNYT 574
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
QT+D F +LC+ R Y ++RLDG+ SI +R K+V+ FNDP+ F FLLSSKAGGCGLNLI
Sbjct: 575 QTIDQFMELCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLI 634
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G NRLV+FDPDWNPAND QA ARVWRDGQKK FIYR L+TG+IEEK++QRQ K+ L
Sbjct: 635 GANRLVMFDPDWNPANDDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSS 694
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ D+ S+E LR+LF V S+ HE + C RC G ES+
Sbjct: 695 CV----VDAGEDVARHFSSEQLRELFKLESTVASDTHEKLKCKRCIQ---GVESV 742
>gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
Length = 700
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/560 (48%), Positives = 364/560 (65%), Gaps = 45/560 (8%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L LRPHQREGV+FM++CV+G G GCI+AD+MGLGKTLQ I LL+TLL Q D
Sbjct: 102 LCCVLRPHQREGVKFMWDCVTGE-RIPGSQGCIMADEMGLGKTLQCITLLWTLLKQSPDA 160
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCS---S 296
KP + KAI+VTP+SLV NW EI KW+G RV +A+ ++D + +DSF S
Sbjct: 161 KPTIDKAIVVTPSSLVKNWYNEINKWLGTRVNALAIDSGSKDQIDRNLDSFMSQQGRRVS 220
Query: 297 LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------------- 340
+LI+SYETFR+H++ L+ICDE HRLKN + LT +
Sbjct: 221 SPILIISYETFRLHAAVLH-RGPIGLVICDEGHRLKNCENLTYQALSGLKCRRRVLLSGT 279
Query: 341 ---NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
NDL E+F++V+F N GILG A F++ +ET I+ GR+ +A+++++K G E+ EL
Sbjct: 280 PIQNDLLEYFSLVHFVNTGILGTAQEFKKRFETPILRGRDASASDKDQKRGEEKLKELLD 339
Query: 398 KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI 457
V++ I+RRT ++LS +LP KI +VVCC+LTPLQ+ LY H + SK V+ + +++K K+
Sbjct: 340 IVDRCIIRRTASILSKYLPVKIEQVVCCRLTPLQTALYKHMVQSKLVQAQL-DKSKSGKV 398
Query: 458 ----LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
IT LKKLCNHP LIY+ G+ G G D PE +S +
Sbjct: 399 TGSAFTAITQLKKLCNHPSLIYEKCLEGDEGLDGALDLF----PEKYSPKH--------I 446
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
ELSGKM VL +L + +T D++VLVSNYTQTLDLF +LCR R Y Y+RLDG+ +I
Sbjct: 447 QPELSGKMLVLDYILAMTKSKTSDKVVLVSNYTQTLDLFEKLCRSRGYLYVRLDGSMTIK 506
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
KR K+V FN+PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRD
Sbjct: 507 KRAKVVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRD 566
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
GQKK+ +IYR L+TGTIEEK++QRQ K+ L + ++ D S ++LRDLF
Sbjct: 567 GQKKQCYIYRLLATGTIEEKIFQRQAHKKALSSCVVDQEEDVD----RHFSLDELRDLFP 622
Query: 694 FHDDVRSEIHENMHCTRCQN 713
++D S+ H+ C RC N
Sbjct: 623 LNEDTISDTHDKFKCRRCVN 642
>gi|338721715|ref|XP_001915622.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Equus caballus]
Length = 763
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/654 (43%), Positives = 388/654 (59%), Gaps = 84/654 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 149 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 207
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 208 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 267
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 268 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 326
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+E ++ LG
Sbjct: 327 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRHLGE 386
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 387 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQNELYKKFLRQAKPAEELR 446
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP +S ++
Sbjct: 447 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGALDIFPPG-YSSKALE--- 499
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R +D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 500 -----PQLSGKMLVLDYILAVTRSRGNDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 554
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+P +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 555 MSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 614
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 615 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 670
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+LFT + S+ H+ + C RC N
Sbjct: 671 ELFTLDEASLSDTHDRLRCRRCVNS----------------------------------- 695
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
H+++ G+ DL W H + D +LQA +A +TFVF
Sbjct: 696 ----HQVRPPPD--GSDCTSDLAQWNHSTDKRGLKDEVLQAAWDAASTAITFVF 743
>gi|348553527|ref|XP_003462578.1| PREDICTED: DNA repair and recombination protein RAD54 [Cavia
porcellus]
Length = 750
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/564 (48%), Positives = 361/564 (64%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 143 VHVVVDPVLSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 201
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 202 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 261
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 262 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 320
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++LG
Sbjct: 321 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDANASEADRQLGE 380
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LT LQ+ELY F+ +
Sbjct: 381 ERLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTSLQTELYKKFLRQAKPAEELR 440
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP S
Sbjct: 441 EGKMSVSSLSSITSLKKLCNHPGLIYDKCVEEE---DGFEGALDIFPPGYSS-------- 489
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 490 -KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 548
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN PS EFVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 549 MSIKKRAKIVERFNSPSSPEFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 608
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ + S +L+
Sbjct: 609 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQNVE----RHFSLGELK 664
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT + S+ H+ +HC RC N
Sbjct: 665 ELFTLDETSLSDTHDRLHCRRCVN 688
>gi|402854403|ref|XP_003891859.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Papio anubis]
Length = 747
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/589 (47%), Positives = 373/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + + +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E ++KLG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRKLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R + D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|344287342|ref|XP_003415412.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Loxodonta africana]
Length = 794
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/564 (48%), Positives = 361/564 (64%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G +GCI+AD+MGLGKTLQ I L++T
Sbjct: 188 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSYGCIMADEMGLGKTLQCITLMWT 246
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 247 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLERFM 306
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 307 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 365
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+E ++ LG
Sbjct: 366 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRHLGE 425
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ ELY F+ +
Sbjct: 426 ERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQMELYKRFLRQAKPAEELC 485
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GFE + FPP S
Sbjct: 486 EAKMSVSSLSSITSLKKLCNHPALIYDKCVEEE---DGFEGALDIFPPGYSS-------- 534
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R R++D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 535 -KALEPQLSGKMLVLDYILAVTRSRSNDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 593
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN S +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 594 MSIKKRAKVVERFNSLSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 653
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 654 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELK 709
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT + S+ H+ +HC RC N
Sbjct: 710 ELFTLDEASLSDTHDRLHCRRCVN 733
>gi|397483209|ref|XP_003812796.1| PREDICTED: DNA repair and recombination protein RAD54-like [Pan
paniscus]
Length = 747
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/589 (47%), Positives = 373/589 (63%), Gaps = 47/589 (7%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + S +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R + D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|195398201|ref|XP_002057711.1| GJ18280 [Drosophila virilis]
gi|292630877|sp|B4M9A8.1|RAD54_DROVI RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194141365|gb|EDW57784.1| GJ18280 [Drosophila virilis]
Length = 786
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/605 (44%), Positives = 378/605 (62%), Gaps = 50/605 (8%)
Query: 138 VENNVIEENFTLPPGVDPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQRE 190
V +++ P + LVL+ P E D L V + VDP+L LRPHQRE
Sbjct: 96 VRRSIVRRALHDPQACNALVLYTPPAYTEHERMSLDPSKLQVHVVVDPILSNVLRPHQRE 155
Query: 191 GVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVT 250
GV+FM+ECV G +GCI+AD+MGLGKTLQ + L +TLL Q D KP + KAI+V+
Sbjct: 156 GVRFMYECVEG--KRGNFNGCIMADEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIVVS 213
Query: 251 PTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF---TDPCSSLQVLIVSYETF 307
P+SLV NWE E KW+ GR+ +A+ +++D ++ F T VL++SYETF
Sbjct: 214 PSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEDTTRTLEQFAMNTATRCGTPVLLISYETF 273
Query: 308 RMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFA 348
R++S C ++ICDE HRLKN LT + NDL E+F+
Sbjct: 274 RLYSHIL-CKTEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFS 332
Query: 349 MVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTN 408
+VNF NP +LG + F+R +E +I+ G+ +T+ E++ +E++ EL VNQ I+RRTN
Sbjct: 333 LVNFVNPEMLGTGSDFKRNFENAILRGQNADSTDAERERALEKTQELVGLVNQCIIRRTN 392
Query: 409 ALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKK 466
+L+ +LP K VVC KLT +Q +LY +F+ S V+R++++ T ++ + LA IT LKK
Sbjct: 393 QILTKYLPVKFEMVVCAKLTAVQLQLYTNFLKSDQVRRSLADCTDKTTLTALADITTLKK 452
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
LCNHP LIY+ I + GFE+ PP ++ D ELSGK +L
Sbjct: 453 LCNHPDLIYEKIAARE---KGFENSQNVLPP--------NYKPKD-VNPELSGKFMLLDF 500
Query: 527 LLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
+L +R +DD++VL+SNYTQTLDLF QL R+R+Y Y+RLDGT +I KR K+V+ FNDP+
Sbjct: 501 MLAAIRANSDDKVVLISNYTQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFNDPA 560
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
+ F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR ++
Sbjct: 561 TDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVA 620
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
+G+IEEK+ QRQ K+ L I D++ + + +DL+DLF F +V S+ H +
Sbjct: 621 SGSIEEKILQRQTHKKSLSSSI----IDNNDSAEKHFTRDDLKDLFRFEANVLSDTHNKL 676
Query: 707 HCTRC 711
C RC
Sbjct: 677 KCKRC 681
>gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 787
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 277/596 (46%), Positives = 376/596 (63%), Gaps = 51/596 (8%)
Query: 150 PPGVDPLVLWQPEE-------PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P+E + G V + VDPLL LRPHQREGV+FM+ECV+G
Sbjct: 98 PYACNALVLFTPQELSEHDKLKADQGKAQVHVVVDPLLGNILRPHQREGVRFMYECVTG- 156
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
GCI+AD+MGLGKTLQ I LL+TLL Q D KP + KA+IV P+SLV NW E
Sbjct: 157 -KRGDFQGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPEINKAVIVCPSSLVKNWYKEF 215
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ---VLIVSYETFRMHSSKFSCSES 319
KW+G RV +++ +++ ++ F S+ Q VLI+SYETFR+++ + SE
Sbjct: 216 GKWLGCRVNCLSIDGGSKEQTTKQLEQFMANQSARQGTPVLIISYETFRLYAGILNNSE- 274
Query: 320 CDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGD 360
++CDE HRLKN + LT + NDL E++++++F NPG+LG
Sbjct: 275 VGAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGS 334
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
+ FRR +E I+ G++ +TE E++ ER ELSA VN+ ++RRT++LL+ +LP K
Sbjct: 335 SNEFRRQFENPILRGQDANSTESEREKATERLQELSALVNRCMIRRTSSLLTKYLPIKFE 394
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISE--ETKQS-KILAYITALKKLCNHPKLIYDT 477
VVC K+T +Q+ELY F+ S +++R++ E E K S L+ ITALKKLCNHP L+Y+
Sbjct: 395 MVVCVKMTDVQTELYKSFLQSDSIRRSVLEKSEVKASLTALSNITALKKLCNHPDLVYEK 454
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
IK GFE+ + P +S + E GK+ VL +L ++ T+D
Sbjct: 455 IKER---AEGFEEAYKILPAN-YSAKE--------VRPEFGGKLMVLDCMLASIKMNTND 502
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+IVLVSNYTQTLDLF +LCR+R Y Y+RLDGT +I KR K+V+ FN P EF+F+LSSK
Sbjct: 503 KIVLVSNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDEFNKPDSKEFIFMLSSK 562
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK FIYR L+TG+IEEK++QR
Sbjct: 563 AGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQR 622
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
Q K+ L + D Q +F + +DL+DLF + S+ H C RC N
Sbjct: 623 QTHKKALSNTVVDNDEDG---QRHF-TQDDLKDLFRLDEATISDTHSIFKCKRCVN 674
>gi|444519261|gb|ELV12696.1| DNA repair and recombination protein RAD54-like protein [Tupaia
chinensis]
Length = 620
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 271/565 (47%), Positives = 364/565 (64%), Gaps = 42/565 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 14 VHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 72
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 73 LLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFM 132
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 133 NQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTS 191
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F++++E I+ GR+ A+E E++LG
Sbjct: 192 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEAERQLGE 251
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LT LQ+ELY F+ +
Sbjct: 252 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTSLQTELYKRFLRQAKPAEELR 311
Query: 450 EETKQSKILAYITALKKLCNHPKLIYD-TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
E L+ IT+LKKLCNHP LIYD ++ N GFE + FPP S
Sbjct: 312 EGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEN----GFEGALNIFPPGYSS------- 360
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
+LSGKM VL +L R + D++VLVSNYTQTLDLF +LCR RRY Y+RLDG
Sbjct: 361 --KALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDG 418
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
T SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA A
Sbjct: 419 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA 478
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
RVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ + S +L
Sbjct: 479 RVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQNVE----RHFSLGEL 534
Query: 689 RDLFTFHDDVRSEIHENMHCTRCQN 713
++LFT + S+ H+ + C RC N
Sbjct: 535 KELFTLDEASLSDTHDRLRCRRCVN 559
>gi|194855241|ref|XP_001968502.1| GG24469 [Drosophila erecta]
gi|292630862|sp|B3NAN8.1|RAD54_DROER RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|190660369|gb|EDV57561.1| GG24469 [Drosophila erecta]
Length = 784
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/592 (44%), Positives = 382/592 (64%), Gaps = 49/592 (8%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN----LVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P E + G + LV + VDPLL LRPHQREGV+FM+ECV G
Sbjct: 115 PVACNALVLFHPPAYTEHERMGMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG- 173
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E
Sbjct: 174 -KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF 232
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESC 320
KW+ GR+ + + T+++ + ++ F+ S L VL++SYETFR+++ + C
Sbjct: 233 TKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVLLISYETFRIYA-EILCKYEV 291
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
++ICDE HRLKN LT + NDL E++++VNF NP +LG A
Sbjct: 292 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTA 351
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F+R +E++I+ G+ +T+ E++ I ++ EL V+Q I+RRTN +L+ +LP K
Sbjct: 352 AVFKRNFESAILRGQNTDSTDAERQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEM 411
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIK 479
V+C KLT +Q ELY +F+ S V+R++++ +++ + LA IT LKK+C+HP LIY+ I
Sbjct: 412 VICAKLTSIQLELYTNFLKSDQVRRSLADCKEKASLTALADITTLKKICSHPNLIYEKIT 471
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
+ + GFE+ P ++ D ELSGK +L +L +R +D++
Sbjct: 472 ARD---KGFENSQNVLP--------SNYNAKDLN-PELSGKFMLLDFMLAAIRADGNDKV 519
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+ FNDP + F+F+LSSKAG
Sbjct: 520 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAG 579
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ
Sbjct: 580 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQT 639
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L I D++ + + +DL+DLFTF D+ S+ H+ + C RC
Sbjct: 640 HKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDADILSDTHDKLKCKRC 687
>gi|17136368|ref|NP_476661.1| okra [Drosophila melanogaster]
gi|74960637|sp|O76460.1|RAD54_DROME RecName: Full=DNA repair and recombination protein RAD54-like;
Short=DmRAD54; AltName: Full=Protein okra; AltName:
Full=RAD54 DNA repair protein
gi|3264618|gb|AAC24577.1| Rad54 homolog OKR [Drosophila melanogaster]
gi|7295868|gb|AAF51168.1| okra [Drosophila melanogaster]
gi|220947310|gb|ACL86198.1| okr-PA [synthetic construct]
gi|220956782|gb|ACL90934.1| okr-PA [synthetic construct]
Length = 784
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/592 (44%), Positives = 383/592 (64%), Gaps = 49/592 (8%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN----LVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P E + G + LV + VDPLL LRPHQREGV+FM+ECV G
Sbjct: 115 PMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG- 173
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E
Sbjct: 174 -KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF 232
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESC 320
KW+ GR+ + + T+++ + ++ F+ + L VL++SYETFR+++ + C
Sbjct: 233 TKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYA-EILCKYEV 291
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
++ICDE HRLKN LT + NDL E++++VNF NP +LG A
Sbjct: 292 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTA 351
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F+R +E++I+ G+ +TE+E++ IE++ EL V+Q I+RRTN +L+ +LP K
Sbjct: 352 AVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEM 411
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIK 479
V+C KLT +Q ELY +F+ S V+R++++ +++ + LA IT LKK+C+HP LIY+ +
Sbjct: 412 VICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLT 471
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
+ GFE+ P ++ D ELSGK +L +L +R +D++
Sbjct: 472 ARE---KGFENSQNVLP--------SNYKPKDLN-PELSGKFMLLDFMLAAIRAEGNDKV 519
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+ FNDP + F+F+LSSKAG
Sbjct: 520 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAG 579
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ
Sbjct: 580 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQT 639
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L I D++ + + +DL+DLFTF ++ S+ H+ + C RC
Sbjct: 640 HKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRC 687
>gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster]
Length = 784
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/592 (44%), Positives = 383/592 (64%), Gaps = 49/592 (8%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN----LVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P E + G + LV + VDPLL LRPHQREGV+FM+ECV G
Sbjct: 115 PMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG- 173
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E
Sbjct: 174 -KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF 232
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESC 320
KW+ GR+ + + T+++ + ++ F+ + L VL++SYETFR+++ + C
Sbjct: 233 TKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYA-EILCKYEV 291
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
++ICDE HRLKN LT + NDL E++++VNF NP +LG A
Sbjct: 292 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTA 351
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F+R +E++I+ G+ +TE+E++ IE++ EL V+Q I+RRTN +L+ +LP K
Sbjct: 352 AVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEM 411
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIK 479
V+C KLT +Q ELY +F+ S V+R++++ +++ + LA IT LKK+C+HP LIY+ +
Sbjct: 412 VICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLT 471
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
+ GFE+ P ++ D ELSGK +L +L +R +D++
Sbjct: 472 ARE---KGFENSQNVLP--------SNYKPKDLN-PELSGKFMLLDFMLAAIRAEGNDKV 519
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+ FNDP + F+F+LSSKAG
Sbjct: 520 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAG 579
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ
Sbjct: 580 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQT 639
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L I D++ + + +DL+DLFTF ++ S+ H+ + C RC
Sbjct: 640 HKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRC 687
>gi|27819922|gb|AAL39744.2| LD35220p, partial [Drosophila melanogaster]
Length = 788
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/592 (44%), Positives = 383/592 (64%), Gaps = 49/592 (8%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN----LVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P E + G + LV + VDPLL LRPHQREGV+FM+ECV G
Sbjct: 119 PMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG- 177
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E
Sbjct: 178 -KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF 236
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESC 320
KW+ GR+ + + T+++ + ++ F+ + L VL++SYETFR+++ + C
Sbjct: 237 TKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYA-EILCKYEV 295
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
++ICDE HRLKN LT + NDL E++++VNF NP +LG A
Sbjct: 296 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTA 355
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F+R +E++I+ G+ +TE+E++ IE++ EL V+Q I+RRTN +L+ +LP K
Sbjct: 356 AVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEM 415
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIK 479
V+C KLT +Q ELY +F+ S V+R++++ +++ + LA IT LKK+C+HP LIY+ +
Sbjct: 416 VICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLT 475
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
+ GFE+ P ++ D ELSGK +L +L +R +D++
Sbjct: 476 ARE---KGFENSQNVLP--------SNYKPKDLN-PELSGKFMLLDFMLAAIRAEGNDKV 523
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+ FNDP + F+F+LSSKAG
Sbjct: 524 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAG 583
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ
Sbjct: 584 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQT 643
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L I D++ + + +DL+DLFTF ++ S+ H+ + C RC
Sbjct: 644 HKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRC 691
>gi|194760847|ref|XP_001962644.1| GF14336 [Drosophila ananassae]
gi|292630861|sp|B3MMA5.1|RAD54_DROAN RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|190616341|gb|EDV31865.1| GF14336 [Drosophila ananassae]
Length = 791
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 270/592 (45%), Positives = 377/592 (63%), Gaps = 49/592 (8%)
Query: 150 PPGVDPLVLWQP------EEPQNDGGN-LVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+QP E D LV + VDPLL LRPHQREGV+FM+ECV G
Sbjct: 118 PQACNALVLFQPPNYTEHERMSMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG- 176
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E
Sbjct: 177 -KKGDFNGCIMADEMGLGKTLQCVTLVWTLLRQGPESKPTINKAIVVSPSSLVKNWEKEF 235
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESC 320
KW+ GR+ +A+ T+++ + ++ F+ S L VL++SYETFR+++ + C
Sbjct: 236 TKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSSKLGTPVLLISYETFRIYA-EILCKYEV 294
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
++ICDE HRLKN LT + NDL E+F++VNF NP +LG A
Sbjct: 295 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTA 354
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F+R +E SI+ G+ +TE E+K IE++ EL V+Q I+RRTN +L+ +LP K
Sbjct: 355 ADFKRNFENSILRGQNADSTEGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEM 414
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIK 479
V+C KLT +Q +LY +F++S V+R++++ +++ + LA IT LKK+C+HP LI+ I+
Sbjct: 415 VICVKLTAIQLQLYTNFLNSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIHQKIE 474
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
+ GFE+ P S E SGK +L +L +R +D++
Sbjct: 475 AKE---KGFENSQNVLP---------SNYKPKEICPEWSGKFMLLDFMLAAIRAAGNDKV 522
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+ FNDP F+F+LSSKAG
Sbjct: 523 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDKFNDPDSECFLFMLSSKAG 582
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR +++GTIEEK+ QRQ
Sbjct: 583 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGTIEEKILQRQT 642
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L I D++ + + +DL+DLF+F + S+ HE + C RC
Sbjct: 643 HKKSLSSTI----IDNNESSEKHFTRDDLKDLFSFDQKILSDTHEKLKCKRC 690
>gi|118094595|ref|XP_422447.2| PREDICTED: DNA repair and recombination protein RAD54-like [Gallus
gallus]
Length = 804
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 287/649 (44%), Positives = 392/649 (60%), Gaps = 93/649 (14%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L R LRPHQREGV+F+++CV+ G HGCI+AD+MGLGKTLQ I L++TLL Q D
Sbjct: 209 LSRVLRPHQREGVKFLWDCVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDC 267
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV 299
KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ +++++ + F + L+V
Sbjct: 268 KPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGFMNQ-RGLRV 326
Query: 300 ----LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--------------- 340
LI+SYETFR+H+ S L+ICDE HRLKN + T +
Sbjct: 327 PSPILIISYETFRLHAEALQ-KGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISG 385
Query: 341 ----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
NDL E+F++V+F N GILG A F+R++E I+ GR+ A+E E++ G ER EL
Sbjct: 386 TPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELI 445
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI-HSKNVKRAISEETKQS 455
+ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY +F+ +K V EE K+
Sbjct: 446 SIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPV-----EELKEG 500
Query: 456 KI----LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGD 511
KI L+ IT+LKKLCNHP LIYD G G D P +S +S
Sbjct: 501 KINVSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALDLF----PAGYSTKS------- 549
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
+LSGKM VL +L + ++D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT S
Sbjct: 550 -VEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMS 608
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
I KR K+V FN PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVW
Sbjct: 609 IKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVW 668
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
RDGQKK +IYR LSTGTIEEK++QRQ K+ L + E+ D S +L++L
Sbjct: 669 RDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVE----RHFSLGELKEL 724
Query: 692 FTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAG 751
F+ ++ S+ H+ + C RC N
Sbjct: 725 FSLNETTISDTHDKIKCRRCVNG------------------------------------- 747
Query: 752 CLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
H+++ + G+ DL+ W H + D++L+A+ VTF F
Sbjct: 748 --HQVRPPPE--GSDCTSDLSQWNHCADKRGLQDSVLKAAWDAAVTFTF 792
>gi|326925324|ref|XP_003208867.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Meleagris gallopavo]
Length = 792
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 286/648 (44%), Positives = 390/648 (60%), Gaps = 91/648 (14%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L R LRPHQREGV+F+++CV+ G HGCI+AD+MGLGKTLQ I L++TLL Q D
Sbjct: 197 LSRVLRPHQREGVKFLWDCVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDC 255
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV 299
KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ +++++ + F + L+V
Sbjct: 256 KPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGFMNQ-RGLRV 314
Query: 300 ----LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--------------- 340
LI+SYETFR+H+ + L+ICDE HRLKN + T +
Sbjct: 315 PSPILIISYETFRLHAEALQ-KGTVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISG 373
Query: 341 ----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
NDL E+F++V+F N GILG A F+R++E I+ GR+ A+E E++ G ER EL
Sbjct: 374 TPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELI 433
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK 456
+ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY +F+ K K EE K+ K
Sbjct: 434 SIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL--KQAKPV--EELKEGK 489
Query: 457 I----LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
I L+ IT+LKKLCNHP LIYD G G D P +S +S
Sbjct: 490 INVSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALDLF----PAGYSTKS-------- 537
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
+LSGKM VL +L + ++D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI
Sbjct: 538 VEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSI 597
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR K+V FN PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWR
Sbjct: 598 KKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWR 657
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
DGQKK +IYR LSTGTIEEK++QRQ K+ L + E+ D S +L++LF
Sbjct: 658 DGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVE----RHFSLGELKELF 713
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
++ S+ H+ + C RC N
Sbjct: 714 ALNETTTSDTHDKIKCRRCVNG-------------------------------------- 735
Query: 753 LHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
H+++ + G+ DL+ W H + D++L+A+ VTF F
Sbjct: 736 -HQVRPPPE--GSDCTSDLSQWNHSADKRGLQDSVLKAAWDAAVTFTF 780
>gi|355745253|gb|EHH49878.1| hypothetical protein EGM_00608 [Macaca fascicularis]
Length = 753
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 277/589 (47%), Positives = 372/589 (63%), Gaps = 41/589 (6%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + + +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E ++KLG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRKLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S GD + KM VL +L R + D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSSKALEPQLSGDPF---PTSKMLVLDYILAVTRSCSSDKVVLVSN 527
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLN
Sbjct: 528 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 587
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 588 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 647
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 648 SSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 692
>gi|449266391|gb|EMC77444.1| DNA repair and recombination protein RAD54-like protein, partial
[Columba livia]
Length = 742
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/655 (43%), Positives = 391/655 (59%), Gaps = 83/655 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L R LRPHQREGV+F+++CV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 139 VHVVVDPVLSRVLRPHQREGVKFLWDCVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 197
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ +++++ + F
Sbjct: 198 LLRQSPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGFM 257
Query: 292 DPCSSLQV----LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------- 340
+ L+V LI+SYETFR+H+ S L+ICDE HRLKN + T +
Sbjct: 258 NQ-RGLRVPSPILIISYETFRLHAEALQ-KGSVGLVICDEGHRLKNSENQTYQALNSLNT 315
Query: 341 ------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
NDL E+F++V+F N GILG A F+R++E I+ GR+ A+E E+ G
Sbjct: 316 PRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFEIPILKGRDADASEAERHKG 375
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY +F+ +
Sbjct: 376 EERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEEL 435
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
E L+ IT+LKKLCNHP LI+D G G D P +S +S
Sbjct: 436 KEGKISVSSLSSITSLKKLCNHPALIHDKCVEEEEGFMGALDLF----PAGYSTKS---- 487
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
+LSGKM VL +L + ++D++VLVSNYTQTLDLF +LCR RRY Y+RLDG
Sbjct: 488 ----VEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDG 543
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
T SI KR K+V FN PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA A
Sbjct: 544 TMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA 603
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
RVWRDGQKK +IYR LSTGTIEEK++QRQ K+ L + E+ D S +L
Sbjct: 604 RVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVE----RHFSLGEL 659
Query: 689 RDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAG 748
++LFT ++ S+ H+ + C RC N
Sbjct: 660 KELFTLNETTTSDTHDKIKCRRCVNG---------------------------------- 685
Query: 749 LAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQ 803
H+++ + G+ DL+ W H + D++L+A+ VTF F +
Sbjct: 686 -----HQVRPPPE--GSDCTSDLSQWNHCADKRGLQDSVLKAAWDAAVTFAFHHH 733
>gi|410920762|ref|XP_003973852.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Takifugu rubripes]
Length = 915
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/645 (43%), Positives = 380/645 (58%), Gaps = 84/645 (13%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L + LRPHQREGV+F++ECV+G G +GCI+AD+MGLGKTLQ I L++TLL Q D
Sbjct: 319 LGKVLRPHQREGVKFLWECVTGR-RIPGSYGCIMADEMGLGKTLQCITLIWTLLRQSPDF 377
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV----VSGIDSFTDPCS 295
KP + K I+V+P+SLV NW E++KW+GGRV +A+ ++DD+ V+ I +
Sbjct: 378 KPEIDKVIVVSPSSLVRNWSNEVQKWLGGRVTPLAIDGGSKDDIDRQLVNFISQYGLRVP 437
Query: 296 SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--------------- 340
S +LI+SYETFR+H++ L+ICDE HRLKN T +
Sbjct: 438 S-PILIISYETFRLHAAVLH-KGKVGLVICDEGHRLKNSDNQTYQALNAMAAQRRVLISG 495
Query: 341 ----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
NDL E+F++V+F N GILG A F++ +E I+ GR+ A E++++ G E+ +EL
Sbjct: 496 TPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADANEKDRQAGEEKLTELI 555
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS- 455
+ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ ELY F+ ++ E K +
Sbjct: 556 SVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQKELYQRFVRQAEPLDSLEEGGKMNV 615
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
L+ IT+LKKLCNHP LIYD G GF+ + FPP +
Sbjct: 616 STLSSITSLKKLCNHPALIYDKCVEG---AEGFQGALDLFPPGYCT---------KAVEP 663
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
LSGKM VL +L + TDD++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR
Sbjct: 664 HLSGKMLVLDYILAITKTTTDDKVVLVSNYTQTLDLFEKLCRSRRYQYVRLDGTMSIKKR 723
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQ
Sbjct: 724 AKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQ 783
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
+K +IYR L+TGTIEEK+ QRQ K+ L + E+ + S +LR+LF+ +
Sbjct: 784 RKTCYIYRLLATGTIEEKILQRQAHKKALSSCVVDEEQNVE----RHFSLGELRELFSLN 839
Query: 696 DDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHK 755
+D S+ H+ C RC N + + D T+
Sbjct: 840 EDTVSDTHDKFRCRRCVNGREARPPAEDADCTS--------------------------- 872
Query: 756 LKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
DL+ W H F + D +L++ V+FVF
Sbjct: 873 --------------DLSQWNHCFDKKGLRDQVLKSCWDAAVSFVF 903
>gi|327271091|ref|XP_003220321.1| PREDICTED: DNA repair and recombination protein RAD54-like [Anolis
carolinensis]
Length = 906
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 288/655 (43%), Positives = 389/655 (59%), Gaps = 83/655 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L R LRPHQREGV+F++ECV+G G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 303 VHVVVDPVLSRVLRPHQREGVKFLWECVTGR-RILGSHGCIMADEMGLGKTLQCITLMWT 361
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + KAI+V+P+SLV NW E+ KW+GGR+Q +A+ +++D+ + F
Sbjct: 362 LLRQSPDCKPEIDKAIVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKEDIDRKLAGFM 421
Query: 292 DPCSSLQV----LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------- 340
+ L+V LI+SYETFR+H+ + L+ICDE HRLKN T +
Sbjct: 422 NQ-RGLRVPSPILIISYETFRLHAEVLQ-KGNVGLVICDEGHRLKNSDNQTYQALYKLNT 479
Query: 341 ------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
NDL E+F++V+F N GILG A F++++E I+ GR+ A+E + G
Sbjct: 480 PRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFEIPILKGRDADASEAGRHKG 539
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQSELY F+ +
Sbjct: 540 EERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSELYKQFLKQAKPAEDL 599
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
E L+ IT+LKKLCNHP LI+D GF ++ FPP +S +S
Sbjct: 600 KEGKISVSSLSSITSLKKLCNHPALIHDKCVEEE---EGFVGALKLFPPG-YSTKSLE-- 653
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
+LSGKM VL +L + ++D++VLVSNYTQTLDLF +LCR RRY Y+RLDG
Sbjct: 654 ------PQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDG 707
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
T SI KR K+V HFN S EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA A
Sbjct: 708 TMSIKKRAKVVEHFNSVSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA 767
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
RVWRDGQKK +IYR LSTGTIEEK++QRQ K+ L + E+ D S +L
Sbjct: 768 RVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVE----RHFSLGEL 823
Query: 689 RDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAG 748
++LFT ++ S+ H+ + C RC N
Sbjct: 824 KELFTLNETTTSDTHDKIKCRRCVNG---------------------------------- 849
Query: 749 LAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQ 803
H+++ + G+ DL+ W H + D +L+A+ VTF F +
Sbjct: 850 -----HQVRPPPE--GSDCTSDLSQWNHCADKRGLQDTVLKAAWDAAVTFTFHHH 897
>gi|449508575|ref|XP_002191829.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Taeniopygia guttata]
Length = 745
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/564 (48%), Positives = 363/564 (64%), Gaps = 40/564 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L R LRPHQREGV+F+++CV+ G HGCI+AD+MGLGKTLQ I L++T
Sbjct: 142 VHVVVDPVLSRVLRPHQREGVKFLWDCVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWT 200
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ +++++ + F
Sbjct: 201 LLRQSPDCKPEIEKAVVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGFM 260
Query: 292 DPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+LI+SYETFR+H+ S L+ICDE HRLKN + T +
Sbjct: 261 SQHGVRVPSPILIISYETFRLHAEVLQ-KGSVGLVICDEGHRLKNSENQTYQALNSLNTP 319
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V+F N GILG A F+R++E I+ GR+ A+E E+ G
Sbjct: 320 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFEMPILKGRDADASEAERHKGE 379
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY +F+ +
Sbjct: 380 ERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKNFLKQAKPVEELK 439
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E L+ IT+LKKLCNHP LIYD GF + FP SG S
Sbjct: 440 EGKISVSSLSSITSLKKLCNHPALIYDKCVEEE---EGFMGALGLFP----SGYSTK--- 489
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L + ++D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 490 --SVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLDGT 547
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 548 MSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 607
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LSTGTIEEK++QRQ K+ L + E+ D S +L+
Sbjct: 608 VWRDGQKKMCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVE----RHFSLGELK 663
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
+LFT ++ S+ H+ + C RC N
Sbjct: 664 ELFTLNETTTSDTHDKIKCHRCVN 687
>gi|351698695|gb|EHB01614.1| DNA repair and recombination protein RAD54-like protein
[Heterocephalus glaber]
Length = 811
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 284/655 (43%), Positives = 384/655 (58%), Gaps = 84/655 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDP+L + LRPHQREGV+F++ECV+ G +GCI+AD+MGLGKTLQ IAL++
Sbjct: 204 LVHVVVDPVLSKVLRPHQREGVKFLWECVTSR-RIPGSYGCIMADEMGLGKTLQCIALMW 262
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
TLL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F
Sbjct: 263 TLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGF 322
Query: 291 TDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------- 340
+ + +LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 323 MNQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNT 381
Query: 341 ------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
NDL E+F++V+F N GILG A F++++E I+ R+ A+E +++LG
Sbjct: 382 SRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDAAASEADRQLG 441
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ +
Sbjct: 442 EERLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEEL 501
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
E L+ IT+LKKLCNHP LI+D GFE + FPP S
Sbjct: 502 REGKMSVSSLSSITSLKKLCNHPALIHDKCVEEE---DGFEGALDIFPPGYSS------- 551
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
+LSGKM VL +L R + D++VLVSNYTQTLDLF +LCR RRY Y+RLDG
Sbjct: 552 --KAIEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDG 609
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
T SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA A
Sbjct: 610 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA 669
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
RVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+ D S +L
Sbjct: 670 RVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGEL 725
Query: 689 RDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAG 748
++LF + S+ H+ + C RC N
Sbjct: 726 KELFILDEASLSDTHDRLQCRRCVNN---------------------------------- 751
Query: 749 LAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
H+++ G+ DL W H + D +LQA +A +TFVF
Sbjct: 752 -----HQVRPPPD--GSDCTSDLGQWNHSTDKRGLQDEVLQAAWDAASTAITFVF 799
>gi|195435389|ref|XP_002065674.1| GK15573 [Drosophila willistoni]
gi|292630875|sp|B4MX21.1|RAD54_DROWI RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194161759|gb|EDW76660.1| GK15573 [Drosophila willistoni]
Length = 784
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/605 (43%), Positives = 384/605 (63%), Gaps = 50/605 (8%)
Query: 138 VENNVIEENFTLPPGVDPLVLWQP------EEPQNDGGN-LVPITVDPLLVRFLRPHQRE 190
V +++ P + LVL+ P E + D LV + VDPLL LRPHQRE
Sbjct: 100 VRRSIVRRALHDPQACNALVLYTPPVYSEHERMKMDPTKILVHVVVDPLLSNILRPHQRE 159
Query: 191 GVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVT 250
GV+FM++CV G +GCI+AD+MGLGKTLQ + L++TLL Q + KP + KAIIV+
Sbjct: 160 GVRFMYDCVEG--KKGNFNGCIMADEMGLGKTLQCVTLVWTLLRQSCECKPTITKAIIVS 217
Query: 251 PTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSS---LQVLIVSYETF 307
P+SLV NWE E KW+ GR+ +A+ +++D + ++ F+ S+ VL++SYETF
Sbjct: 218 PSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEDTIKALEQFSMNTSTRLGTPVLLISYETF 277
Query: 308 RMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFA 348
R++++ C ++ICDE HRLKN LT + NDL E+F+
Sbjct: 278 RIYANIL-CQNEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFS 336
Query: 349 MVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTN 408
+VNF NP +LG AA F+R +E I+ G+ ++++E++ +E++ EL VNQ I+RRTN
Sbjct: 337 LVNFVNPEMLGTAADFKRNFENPILKGQNTDSSDKERERALEKTQELIGLVNQCIIRRTN 396
Query: 409 ALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKK 466
+L+ +LP K V+C +LT +Q E Y +F+ S V+R++++ +++ + LA IT LKK
Sbjct: 397 QILTKYLPVKFEMVICVRLTSVQLEFYTNFLKSDKVRRSLADCNEKASLTALADITTLKK 456
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
LC+HP LIY+ + + + GFE+ P ++ D ELSGK +L
Sbjct: 457 LCSHPDLIYEKMLARD---KGFENSQNILP--------TNYKPKDLN-PELSGKFMLLDF 504
Query: 527 LLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
+L +R +DD++VL+SNYTQTLDLF QL R+R+Y ++RLDGT +I KR K+V+ FNDP
Sbjct: 505 MLATIRANSDDKVVLISNYTQTLDLFEQLARKRKYTFVRLDGTMTIKKRSKVVDRFNDPE 564
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
+ F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR ++
Sbjct: 565 NDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVA 624
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
+G+IEEK+ QRQ K+ L I D++ + + +DL+DLF+F + S+ HE +
Sbjct: 625 SGSIEEKILQRQTHKKSLSSTI----IDNNESAEKHFTRDDLKDLFSFDSKILSDTHEKL 680
Query: 707 HCTRC 711
C RC
Sbjct: 681 KCKRC 685
>gi|383848072|ref|XP_003699676.1| PREDICTED: DNA repair and recombination protein RAD54 [Megachile
rotundata]
Length = 760
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/600 (46%), Positives = 375/600 (62%), Gaps = 61/600 (10%)
Query: 150 PPGVDPLVLWQPEEPQ-------NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + L+++ P E + LV + VDPLL LRPHQREGV+FM+ECV+G
Sbjct: 131 PNEANALIVYSPPELSEHERLKIDQSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGQ 190
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
G +GCI+AD+MGLGKTLQ I L++TLL QG + KP+++KAIIV P+SLV NW EI
Sbjct: 191 -RIEGAYGCIMADEMGLGKTLQCITLMWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEI 249
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSE 318
KW+ RVQ +A+ + D+ + + F C++ +LI+SYETFR+H+ E
Sbjct: 250 FKWLKNRVQPLAIDGGNKADIDAKLTGFMKTYGRRCAN-PILIISYETFRLHAHVLHQDE 308
Query: 319 SCDLLICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILG 359
L++CDE HRLKN Q L N +NDL E+F++V+F N G+LG
Sbjct: 309 -VGLVLCDEGHRLKNSENQTYQALMNLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLG 367
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A FR+ +E I+ G++ AT+ E+KL ER SEL VN+ ++RRT+ALLS +LP K
Sbjct: 368 TAQEFRKKFEIPILRGQDAAATDTERKLAQERLSELVTLVNKCLIRRTSALLSKYLPLKH 427
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK------ILAYITALKKLCNHPKL 473
VVC K+ LQ++LY +FI S ++K+++ E + SK L+ IT LKKLCNHP L
Sbjct: 428 ELVVCIKMGKLQTDLYKNFIQSDSIKKSMEENSDGSKKGKSLSALSAITLLKKLCNHPDL 487
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
+Y+ I + GFE+ + PP +S + ELSGK+ VL LL ++
Sbjct: 488 VYEKILQQ---SDGFENAAKLMPPN-YSTKE--------ILPELSGKLMVLDCLLASIKT 535
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
T D+IVLVSNYTQTLDLF +LC +R Y Y+RLDGT +I KR K+V+ FND + N+F+F+
Sbjct: 536 TTKDKIVLVSNYTQTLDLFEKLCHKRSYNYVRLDGTMTIKKRSKVVDKFNDENSNDFIFM 595
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK F TGTIEEK
Sbjct: 596 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF------TGTIEEK 649
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
++QRQ K+ L + ++ D + + DLRDLF ++ S+ H C RC N
Sbjct: 650 IFQRQAHKKALSSTVVDQEEDVA----RHFTLNDLRDLFKLEENTISDTHAKFKCKRCVN 705
>gi|348522722|ref|XP_003448873.1| PREDICTED: DNA repair and recombination protein RAD54 [Oreochromis
niloticus]
Length = 747
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/682 (42%), Positives = 399/682 (58%), Gaps = 92/682 (13%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNL---------VPITVDPLLVRFLRPHQREGVQFMFECVS 200
P D L+L++P P +L V + VDP+L + LRPHQR+GV+FM+ECV+
Sbjct: 115 PFAEDALILYEP--PALSAHDLIKADKEKLPVHVVVDPVLGKVLRPHQRQGVKFMWECVT 172
Query: 201 GLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEA 260
G G +GCI+AD+MGLGKTLQ I L++TLL Q D KP + KAI+V+P+SLV NW
Sbjct: 173 GR-RIPGSYGCIMADEMGLGKTLQCITLMWTLLRQSPDTKPEIDKAIVVSPSSLVHNWYN 231
Query: 261 EIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCS 317
E++KW+G R+ +A+ +++ + ++SF S +LI+SYETFR+H+
Sbjct: 232 EVRKWLGTRITPLAIDGGSKEGINKQLESFVSQRSLRAHTPILIISYETFRLHAEVLHRG 291
Query: 318 ESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGIL 358
+ L+ICDE HRLKN T + NDL E+F++V+F N GIL
Sbjct: 292 K-VGLIICDEGHRLKNSDNQTYQALNTMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGIL 350
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPK 418
G + F++ +E I+ GR+ A+++E+ G E+ EL + VN+ ++RRT+ +LS +LP K
Sbjct: 351 GTSQEFKKRFELPILKGRDADASDKERLSGEEKLKELISIVNRCLIRRTSDILSKYLPMK 410
Query: 419 IIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI 478
I ++VCC+LTPLQ+ELY HF+ + + L+ IT+LKKLCNHP LIY+
Sbjct: 411 IEQIVCCRLTPLQTELYKHFLKQAKPIETLQKGKISVSSLSSITSLKKLCNHPALIYEKC 470
Query: 479 KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR 538
GFE + FPP +++ D +LSGKM VL +L + T D+
Sbjct: 471 VERE---EGFEGALELFPP--------NYSTKD-VEPQLSGKMLVLDYILAMTKTTTGDK 518
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKA 598
+VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS EF+F+LSSKA
Sbjct: 519 VVLVSNYTQTLDLFEKLCRSRRYLYVRLDGTMSIKKRAKIVEKFNSPSNPEFIFMLSSKA 578
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LSTGTIEEK+ QRQ
Sbjct: 579 GGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQ 638
Query: 659 MSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGA 718
K+ L + E+ D S +LR+LFT +++ S+ H+ C RC N
Sbjct: 639 AHKKALSSCVVDEEQDVE----RHFSLGELRELFTLNEETTSDTHDKFRCRRCVN----G 690
Query: 719 ESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHF 778
I + D N A+ N DL++W H
Sbjct: 691 REIRQPD--NDADCNS-----------------------------------DLSHWNHCS 713
Query: 779 YSMSVPDAILQASAGDEVTFVF 800
+ D +L+AS V+FVF
Sbjct: 714 DKKGLRDQVLKASWDAAVSFVF 735
>gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei]
gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei]
Length = 1096
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/595 (45%), Positives = 373/595 (62%), Gaps = 45/595 (7%)
Query: 156 LVLWQPE------EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
L+L+ PE + + D V + DP++ + LRPHQR+GV+FM++CV+G+ N H
Sbjct: 443 LILYAPELISEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGV-NIPEYH 501
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCI+AD+MGLGKTLQ I+LL+TLL Q D P V K+IIV P+SLV NW+ EIKKW+G R
Sbjct: 502 GCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTR 561
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
+ + + R+ +++ ++SF ++ VLI+SYETFR++++ S ++ICD
Sbjct: 562 LNAMPVDSGKRELIIASLNSFMADSKMRCAIPVLIISYETFRLYANILH-SGDVGIVICD 620
Query: 327 EAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLKN LT + NDL E+F++VNF NPG+LG A+ FR+
Sbjct: 621 EGHRLKNSDNLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKK 680
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+E +I+ GR+ A+ E++K G E++ E+ + V + I+RRT+ALL+ +LP K ++CCK
Sbjct: 681 FENAILKGRDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKN 740
Query: 428 TPLQSELYNHFIHSKNVKRAISEET-KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+ LQ LYN I + R + ++ + L++IT LKKLCNHP L+Y+ + P
Sbjct: 741 STLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVYEEFQ--KPDNR 798
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
C+ FP E F+ +S + SGKM VL +L R+ TDD+ VLVSNYT
Sbjct: 799 FRNKCLPVFP-EAFNPKSFDPS--------FSGKMKVLDYILAVTRKTTDDKFVLVSNYT 849
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
QT+D F LC+ R Y ++RLDG+ SI +R K+V+ FNDPS F FLLSSKAGGCGLNLI
Sbjct: 850 QTIDQFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPSSTIFCFLLSSKAGGCGLNLI 909
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G NRLV+FDPDWNPAND QA ARVWRDGQKK FIYR L+TG+IEEK++QRQ K+ L
Sbjct: 910 GANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSS 969
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ + ++ E LR+LF V S+ HE + C RC G ES+
Sbjct: 970 CVVSFKRYNNENSIYHFRNEQLRELFKLESTVASDTHEKLKCKRCIQ---GLESV 1021
>gi|51316190|sp|O12944.1|RAD54_CHICK RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Putative recombination factor GdRad54;
AltName: Full=RAD54 homolog
gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 [Gallus gallus]
Length = 733
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 286/648 (44%), Positives = 390/648 (60%), Gaps = 91/648 (14%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L R LRPHQREGV+F+++CV+ G HGCI+AD+MGLGKTLQ I L++TLL Q D
Sbjct: 138 LSRVLRPHQREGVKFLWDCVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDC 196
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV----VSGIDSFTDPCS 295
KP ++KA++V+P+SLV NW E++KW+GGR+Q +A+ +++++ V ++
Sbjct: 197 KPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRGLRVP 256
Query: 296 SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--------------- 340
S +LI+SYETFR+H+ S L+ICDE HRLKN + T +
Sbjct: 257 S-PILIISYETFRLHAEALQ-KGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISG 314
Query: 341 ----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
NDL E+F++V+F N GILG A F+R++E I+ GR+ A+E E++ G ER EL
Sbjct: 315 TPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELI 374
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK 456
+ VN+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY +F+ K K EE K+ K
Sbjct: 375 SIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL--KQAKPV--EELKEGK 430
Query: 457 I----LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
I L+ IT+LKKLCNHP LIYD G G D P +S +S
Sbjct: 431 INVSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALDLF----PAGYSTKS-------- 478
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
+LSGKM VL +L + ++D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI
Sbjct: 479 VEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSI 538
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR K+V FN PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWR
Sbjct: 539 KKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWR 598
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
DGQKK +IYR LSTGTIEEK++QRQ K+ L + E+ D S +L++LF
Sbjct: 599 DGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVE----RHFSLGELKELF 654
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
+ ++ S+ H+ + C RC N
Sbjct: 655 SLNETTISDTHDKIKCRRCVNG-------------------------------------- 676
Query: 753 LHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
H+++ + G+ DL+ W H + D++L+A+ VTF F
Sbjct: 677 -HQVRPPPE--GSDCTSDLSQWNHCADKRGLQDSVLKAAWDAAVTFTF 721
>gi|449675767|ref|XP_002170465.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Hydra magnipapillata]
Length = 716
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 288/675 (42%), Positives = 388/675 (57%), Gaps = 89/675 (13%)
Query: 156 LVLWQPEE-------PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
LVL+ P E NLV + VDP L LRPHQREGV+F+++CV G
Sbjct: 89 LVLYSPPEVSAHNKLTSKSEENLVHVVVDPQLTSVLRPHQREGVKFLYDCVVGN-RIKDN 147
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
GCI+AD+MGLGKTLQ I +L+TLL Q GKP + KAIIV P SLV NW+ EI+KW+ G
Sbjct: 148 FGCIMADEMGLGKTLQCITVLWTLLRQSPSGKPEINKAIIVAPASLVKNWDKEIEKWLKG 207
Query: 269 RVQLIAL---CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
RV +A+ +S DD +S S + +LI+SYETFR+H+ S L+IC
Sbjct: 208 RVHTLAIDSGSKSEIDDKLSSFMSQQQVRAPTPILIISYETFRLHTDVLHRS-PVGLVIC 266
Query: 326 DEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRR 366
DE HRLKN + T + NDL E+F++V+F N G+LG + FRR
Sbjct: 267 DEGHRLKNLENQTYQALNLLKTKKRILLSGTPIQNDLLEYFSLVHFVNGGMLGTVSEFRR 326
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+E I+ GR+ +E ++K+G E+ +EL + V++ I+RRT+A+LS +LP K ++V CK
Sbjct: 327 KFEAPILRGRDGAGSESDQKIGEEKLAELLSIVSKCIIRRTSAILSKYLPVKTEQIVMCK 386
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETK-QSKILAYITALKKLCNHPKLIYDTIKSGNPGT 485
LT LQS+LY F++SK + + + K + LA+I +KKLCNHP+LIYD K
Sbjct: 387 LTTLQSKLYKAFVNSKVARMQLQADAKLNASSLAFINLIKKLCNHPELIYDKQKLCE--- 443
Query: 486 TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNY 545
++ + FPP + S +LSGKM VL +L ++ ++D++VLVSNY
Sbjct: 444 DNLQEVLNEFPPNFNTKVFAS---------DLSGKMQVLDFILALVKSTSNDKVVLVSNY 494
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNL 605
TQT+DLF +L R R Y Y+RLDG+ SI KR K+V+ FNDP+ N+F+F+LSSKAGGCGLNL
Sbjct: 495 TQTIDLFEKLSRLRGYQYVRLDGSMSIKKRMKVVDRFNDPNSNDFLFMLSSKAGGCGLNL 554
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
IG NRLV+FDPDWNPAND QA ARVWRDGQKK VFIYR LSTGTIEEK+ QRQ K+ L
Sbjct: 555 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKEVFIYRLLSTGTIEEKILQRQTHKKALS 614
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGD 725
+ E+ D S +L++LF + + + HE + C RC N + D
Sbjct: 615 SCVVDEEVDVE----RHFSLNELKELFKYDSETICDTHERLKCRRCVNNVQVKAPPDQAD 670
Query: 726 ETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPD 785
TN DL W H + V D
Sbjct: 671 CTN-----------------------------------------DLTLWNHSASTKGVSD 689
Query: 786 AILQASAGDEVTFVF 800
IL+ + ++FVF
Sbjct: 690 IILKRAWNSGISFVF 704
>gi|195161916|ref|XP_002021802.1| GL26701 [Drosophila persimilis]
gi|292630865|sp|B4GS98.1|RAD54_DROPE RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194103602|gb|EDW25645.1| GL26701 [Drosophila persimilis]
Length = 782
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/565 (45%), Positives = 368/565 (65%), Gaps = 42/565 (7%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDPLL LRPHQREGV+FM+ECV G +GCI+AD+MGLGKTLQ +AL++
Sbjct: 139 LVHVVVDPLLSNILRPHQREGVRFMYECVEG--KRGNFNGCIMADEMGLGKTLQCVALVW 196
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
TLL Q + KP + K IIV+P+SLV NWE E KW+ GR+ +A+ ++++ V ++ F
Sbjct: 197 TLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKENTVRALEQF 256
Query: 291 TDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------- 340
+ S+ VL++SYETFR+++ + C ++ICDE HRLKN LT +
Sbjct: 257 SMNASTRLGTPVLLISYETFRIYA-EILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKT 315
Query: 341 ------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
NDL E+F++VNF NP +LG AA F+R +E I+ G+ +T++E+
Sbjct: 316 KRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRGQNADSTDKERDRA 375
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
+E++ EL V+Q I+RRTN +L+ +LP K V+C KLTP+Q +LY +F+ S V+R++
Sbjct: 376 LEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLYTNFLKSDQVRRSL 435
Query: 449 SEETKQSKI--LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
++ +++ + LA IT LKKLC+HP LI + I +G GFE+ P +
Sbjct: 436 ADCKEKASLTALADITTLKKLCSHPNLICEKIAAGE---KGFENSQNILPI--------N 484
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+ ELSGK +L +L +R +D++VL+SNYTQTLDLF L R+R+Y ++RL
Sbjct: 485 YNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFELLARKRKYGFVRL 544
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT SI KR K+V+ FNDP + F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA
Sbjct: 545 DGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK +IYR +++G+IEEK+ QRQ K+ L I D++ + + +
Sbjct: 605 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTI----IDNNESAEKHFTRD 660
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRC 711
DL+DLF+F D+ S+ H+ + C RC
Sbjct: 661 DLKDLFSFDPDILSDTHDKLKCKRC 685
>gi|341883705|gb|EGT39640.1| hypothetical protein CAEBREN_07872 [Caenorhabditis brenneri]
Length = 1092
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/600 (45%), Positives = 372/600 (62%), Gaps = 62/600 (10%)
Query: 156 LVLWQPEEP------QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
L+L+ PE+ + D V + DP++ + LRPHQREGV+FM++CV+G+ N H
Sbjct: 428 LILYAPEQLSEHAQLKEDKDRKVHVVADPVVGKILRPHQREGVKFMWDCVTGV-NIPEFH 486
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCI+AD+MGLGKTLQ I+LL+TLL Q D P V K+IIV P+SLV NW+ EIKKW+G R
Sbjct: 487 GCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTR 546
Query: 270 VQLIALCESTRDDVVSGI--------DSFTDPCS---------SLQVLIVSYETFRMHSS 312
+ + + R+ +++ + + P S ++ VLI+SYETFR++++
Sbjct: 547 LSAMPVDSGKREQIIASLSESSVVLQNKLRFPASFMADSKMRCAIPVLIISYETFRLYAN 606
Query: 313 KFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFT 353
E ++ICDE HRLKN LT + NDL E+F++VNF
Sbjct: 607 ILHSGE-VGIVICDEGHRLKNSDNLTYQALSGLKCVRRVLISGTPIQNDLLEYFSLVNFV 665
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
NPG+LG A+ FR+ +E +I+ GR+ A+ E++K G E++ E+ + V + I+RRT+ALL+
Sbjct: 666 NPGLLGTASEFRKKFENAILKGRDADASSEDQKKGEEKTKEMVSLVEKCIIRRTSALLTK 725
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK--QSKILAYITALKKLCNHP 471
+LP K ++CCK + LQ LYN I + R I+E+ K + L++IT LKKLCNHP
Sbjct: 726 YLPVKYEHIICCKNSTLQETLYNKLIECEKQNR-IAEKDKGATASALSFITHLKKLCNHP 784
Query: 472 KLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL 531
L+Y+ + P + C+ FP E F+ +S + SGKM VL +L
Sbjct: 785 YLVYEEFQ--KPDNRFRDKCLSAFP-ESFNPKSFDPS--------FSGKMKVLDYILAVT 833
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV 591
R+ TDD+ VLVSNYTQT+D F LC+ R Y ++RLDG+ SI +R K+V+ FNDPS + F
Sbjct: 834 RKTTDDKFVLVSNYTQTIDQFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPSSSIFC 893
Query: 592 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIE 651
FLLSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK FIYR L+TG+IE
Sbjct: 894 FLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIE 953
Query: 652 EKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
EK++QRQ K+ L + D+ S E LR+LF V S+ H + C RC
Sbjct: 954 EKMFQRQTHKKALSSCV----VDAGEDVARHFSNEQLRELFKLESTVASDTHTKLKCKRC 1009
>gi|256080936|ref|XP_002576731.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
gi|360045008|emb|CCD82556.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
Length = 832
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/699 (42%), Positives = 406/699 (58%), Gaps = 103/699 (14%)
Query: 92 PPCSNGYDNGNDQLARRLCARKRFVPW----GSSRPVLVTITNRLDLPRTVENNVIEENF 147
P C Y + ++ L R + ++ VP GSS V V + R + R ++ EE
Sbjct: 101 PACD--YSDPHENLIRNILSKPFRVPIINYNGSSNDVRV-LGVRRNTSRVALHDPFEE-- 155
Query: 148 TLPPGVDPLVLWQPEE-------PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVS 200
D LVL+ P E Q LV + VDP+L + LRPHQREGV+FM++CV+
Sbjct: 156 ------DALVLYSPPEVTAHDALKQEATKKLVHVVVDPMLSKILRPHQREGVKFMYDCVT 209
Query: 201 GLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEA 260
G+ HGCI+AD+MGLGKTLQ I L++TLL QG +GKP++ KA+IVTP+SL+ NW
Sbjct: 210 GV-QIPNNHGCIMADEMGLGKTLQCITLIWTLLRQGPEGKPIIDKAVIVTPSSLLRNWYN 268
Query: 261 EIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCS 317
E +KW+ G++ +A+ +++D+ S + F +LI+SYETFR+H+S
Sbjct: 269 EFQKWLHGKIHPLAIDSGSKEDIDSKLAGFLSQAGRRIPSPILIISYETFRLHASVLH-K 327
Query: 318 ESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGIL 358
S L++CDE HRLKN + T + NDL E+F++V+F N G+L
Sbjct: 328 GSVGLVLCDEGHRLKNSENQTYQALVQLKCPRRVLLSGTPIQNDLLEYFSLVHFVNMGLL 387
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE----------LSAKVNQFILRRTN 408
G A+ FRR+YE I+ GR+ AT E++K G E E L V + I+RRT
Sbjct: 388 GTASEFRRHYEIPILRGRDADATNEDQKKGEEILQEYNCYLIPFEKLLGIVTRCIIRRTQ 447
Query: 409 ALLSNHLPPKII------------------------EVVCCKLTPLQSELYNHFI----H 440
ALL+ +LP K+I +VVCC L Q E+Y+ F+
Sbjct: 448 ALLTKYLPVKMITYTLVVFYWLYTLFSPLLFSVSVEQVVCCNLVGSQREVYSDFVKRMAR 507
Query: 441 SKNVKRAISEETKQSKI----LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
++K I++ + K+ LA IT LKKLCNHP L+Y+ + + T GF + + +FP
Sbjct: 508 EVSLKMNIADGLRNDKLSISSLASITHLKKLCNHPDLVYEKMTAN---TDGFHNALSYFP 564
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
+ GS ELSGK VL LL ++ T D++VL+SNYTQTLDLF +LC
Sbjct: 565 ----ANYQGSLESNASVKPELSGKFQVLDCLLAVIKSTTSDKVVLISNYTQTLDLFERLC 620
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
+R Y ++RLDGT +I KR K+V FNDP+ +FVF+LSSKAGGCGLNLIG NRLV+FDP
Sbjct: 621 LQRGYNFVRLDGTMTIKKRAKVVEQFNDPTSRDFVFMLSSKAGGCGLNLIGANRLVMFDP 680
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI--QQEQTD 674
DWNPAND QA ARVWRDGQKK+ +IYR +STGTIEEK+ QRQ K+ L + QQE+ +
Sbjct: 681 DWNPANDDQAMARVWRDGQKKQCYIYRLISTGTIEEKMLQRQAHKKALSSCVVDQQEEVE 740
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S +DLR+LF +H + S+ H+ C RC N
Sbjct: 741 ------RHFSLDDLRELFMYHSETLSDTHDRFKCRRCVN 773
>gi|198473012|ref|XP_001356143.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
gi|292630937|sp|Q29KH2.2|RAD54_DROPS RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|198139260|gb|EAL33203.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
Length = 782
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/565 (45%), Positives = 368/565 (65%), Gaps = 42/565 (7%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDPLL LRPHQREGV+FM+ECV G +GCI+AD+MGLGKTLQ +AL++
Sbjct: 139 LVHVVVDPLLSNILRPHQREGVRFMYECVEG--KRGNFNGCIMADEMGLGKTLQCVALVW 196
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
TLL Q + KP + K IIV+P+SLV NWE E KW+ GR+ +A+ ++++ V ++ F
Sbjct: 197 TLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKENTVRALEQF 256
Query: 291 TDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------- 340
+ S+ VL++SYETFR+++ + C ++ICDE HRLKN LT +
Sbjct: 257 SMNASTRLGTPVLLISYETFRIYA-EILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKT 315
Query: 341 ------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
NDL E+F++VNF NP +LG AA F+R +E I+ G+ +T++E+
Sbjct: 316 KRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRGQNADSTDKERDRA 375
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
+E++ EL V+Q I+RRTN +L+ +LP K V+C KLTP+Q +LY +F+ S V+R++
Sbjct: 376 LEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLYTNFLKSDQVRRSL 435
Query: 449 SEETKQSKI--LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
++ +++ + LA IT LKKLC+HP LI + I + GFE+ P +
Sbjct: 436 ADCKEKASLTALADITTLKKLCSHPNLICEKIAAEE---KGFENSQNILPI--------N 484
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+ ELSGK +L +L +R +D++VL+SNYTQTLDLF QL R+R+Y ++RL
Sbjct: 485 YNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFEQLARKRKYGFVRL 544
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT SI KR K+V+ FNDP + F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA
Sbjct: 545 DGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK +IYR +++G+IEEK+ QRQ K+ L I D++ + + +
Sbjct: 605 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTI----IDNNESAEKHFTRD 660
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRC 711
DL+DLF+F D+ S+ H+ + C RC
Sbjct: 661 DLKDLFSFDPDILSDTHDKLKCKRC 685
>gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae]
Length = 782
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/596 (45%), Positives = 374/596 (62%), Gaps = 51/596 (8%)
Query: 156 LVLWQPEEP------QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
L+L+ PE+ + D V + DP++ + LRPHQR+GV+FM++CV+G+ N H
Sbjct: 133 LILYAPEQLSEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGV-NIPEYH 191
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCI+AD+MGLGKTLQ I+LL+TLL Q D P V K+IIV P+SLV NW+ EIKKW+G R
Sbjct: 192 GCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTR 251
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
+ + + R+ ++ ++SF ++ VLI+SYETFR++++ E ++ICD
Sbjct: 252 LNAMPVDSGKRELIIQCLNSFMSDSKMRCAIPVLIISYETFRLYANILHSGE-VGIVICD 310
Query: 327 EAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLKN + LT + NDL E+F++VNF NPG+LG A+ FR+
Sbjct: 311 EGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKK 370
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+E +I+ GR+ A+ E++K G E++ E+ + V + I+RRT+ALL+ +LP K ++CCK
Sbjct: 371 FENAILKGRDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKN 430
Query: 428 TPLQSELYNHFIHSKNVKRAISEETK--QSKILAYITALKKLCNHPKLIYDTIKSGNPGT 485
+ LQ LYN I + R I+E+ K + L++IT LKKLCNHP L+Y+ ++ P
Sbjct: 431 STLQETLYNKLIECEKQNR-ITEKDKGATASALSFITHLKKLCNHPYLVYEELQ--KPDN 487
Query: 486 TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNY 545
C+ FP E F+ +S + SGKM VL +L R+ TDD+ VLVSNY
Sbjct: 488 RFRTKCLSVFP-EAFNPKSFDPS--------FSGKMKVLDYILAVTRKTTDDKFVLVSNY 538
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNL 605
TQT+D F LC+ R Y ++RLDG+ SI +R K+V+ FNDP+ F FLLSSKAGGCGLNL
Sbjct: 539 TQTIDQFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL 598
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
IG NRLV+FDPDWNPAND QA ARVWRDGQKK FIYR L+TG+IEEK++QRQ K+ L
Sbjct: 599 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALS 658
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ D+ S E LR+LF S+ H + C RC G ES+
Sbjct: 659 SCV----VDAGEDVARHFSNEQLRELFKLESASASDTHSKLKCKRCIQ---GLESV 707
>gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818]
Length = 752
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/657 (42%), Positives = 385/657 (58%), Gaps = 84/657 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L LRPHQ EGVQF++ V+G+ N G +GCI+AD+MGLGKT Q + L++T
Sbjct: 123 VHVVVDPILGTKLRPHQVEGVQFLWNAVTGV-NIEGFNGCIMADEMGLGKTFQCVTLVWT 181
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D +P KAIIV P+SLV NW E KW+G R+ +A+ +S RDD+ ++ F
Sbjct: 182 LLTQSPDCRPTTNKAIIVCPSSLVKNWYNEFGKWLGNRISPLAV-DSGRDDMKRQMERFV 240
Query: 292 DPCSSLQ--VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--------- 340
+Q VLI+SYE R+++ C + ++ICDE HRLKN Q+ T +
Sbjct: 241 SATGRVQHPVLILSYEALRLNADIL-CVKPIGIVICDEGHRLKNSQSQTYKSLMQLKTAR 299
Query: 341 ----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIE 390
N+L E++A+V F NPG+LG A FR+ +E I+ R+ AT++E ++G +
Sbjct: 300 RIILSGTPIQNELLEYYALVEFCNPGLLGSAGEFRKRFENPILRSRDSLATDKELEIGAQ 359
Query: 391 RSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
R +E++ VN+ ++RRTN +LS +LPPKI +VVCC+ T LQ E+Y + +K +KR
Sbjct: 360 RLAEMTEIVNRCVIRRTNDILSKYLPPKIEQVVCCRPTNLQMEMYKAMLGAK-MKRKDGT 418
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKS-GNPGTTGFEDCIRFFP---PEMFSGRSGS 506
T S LA+IT LKKLCNHP+L++D I G F F P P M +
Sbjct: 419 VTGSS--LAFITELKKLCNHPQLLHDKIAGKGKTKDKAFGALDPFLPQLKPSMQRLQP-- 474
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+LSGK+ VL LL ++ +T D+IVLVSNYTQTL+LF LC R Y Y+RL
Sbjct: 475 ---------QLSGKLAVLDCLLATIKMQTTDKIVLVSNYTQTLELFTTLCALRGYQYVRL 525
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG+ +I +RQK+V+ FNDP+ ++F+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA
Sbjct: 526 DGSMTIKRRQKIVDRFNDPTSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA 585
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQ K F+YRF++TGTIEEK+ QRQ K+ L + + + D S
Sbjct: 586 MARVWRDGQTKLCFVYRFVTTGTIEEKILQRQAHKKALSQCVVDDGLDVE----RHFSKN 641
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGF 746
DLR+LF D S H C RC DG S+ + G
Sbjct: 642 DLRELFVLDDKCTSSTHMQFKCRRCSK--DGTYSL------------------IPPTGEV 681
Query: 747 AGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQ 803
G+ +DL W H+ ++ D +L A+AG V+FVF Q
Sbjct: 682 KGIP------------------QDLAEWDHYPLGKNIKDKVLAAAAGKTVSFVFRAQ 720
>gi|195031155|ref|XP_001988299.1| GH10642 [Drosophila grimshawi]
gi|292630863|sp|B4JCS7.1|RAD54_DROGR RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|193904299|gb|EDW03166.1| GH10642 [Drosophila grimshawi]
Length = 786
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/605 (43%), Positives = 376/605 (62%), Gaps = 50/605 (8%)
Query: 138 VENNVIEENFTLPPGVDPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQRE 190
V +++ P + LVL+ P E D L V + VDPLL LRPHQRE
Sbjct: 96 VRRSIVRRALHDPLACNALVLFTPPVYTEHERMSLDPSKLQVHVVVDPLLSNVLRPHQRE 155
Query: 191 GVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVT 250
GV+FM+ECV G +GCI+AD+MGLGKTLQ + L +TLL Q D KP + KAI+V+
Sbjct: 156 GVRFMYECVEG--KRGSFNGCIMADEMGLGKTLQCVTLTWTLLRQSADCKPTISKAIVVS 213
Query: 251 PTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSS---LQVLIVSYETF 307
P+SLV NWE E KW+ GR+ +A+ ++++ ++ F S+ VL++SYETF
Sbjct: 214 PSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEETTRTLEQFAMNTSTRCGTPVLLISYETF 273
Query: 308 RMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFA 348
R+++ C ++ICDE HRLKN LT + NDL E+F+
Sbjct: 274 RLYAHIL-CKTEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFS 332
Query: 349 MVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTN 408
+VNF NP +LG A F+R +E +I+ G+ +T+ E++ + ++ EL VNQ I+RRTN
Sbjct: 333 LVNFVNPEMLGTATDFKRNFENAILRGQNADSTDTERERALLKTQELIGLVNQCIIRRTN 392
Query: 409 ALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY--ITALKK 466
+L+ +LP K VVC KLT +Q ++Y +F+ S V R++++ +++ + A IT LKK
Sbjct: 393 QILTKYLPVKFEMVVCAKLTAVQLQIYTNFLKSDQVCRSLADCNEKTSLTALSDITTLKK 452
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
LCNHP LIY+ + + G FE+ P ++ D ELSGK +L
Sbjct: 453 LCNHPDLIYEKLAAREKG---FENSQNVLP--------ANYKPKDIN-PELSGKFMLLDF 500
Query: 527 LLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
+L +R +DD++VL+SNYTQTLDLF QL R+R+Y Y+RLDGT +I KR K+V+ FNDPS
Sbjct: 501 MLAAIRANSDDKVVLISNYTQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFNDPS 560
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
+ F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +IYR ++
Sbjct: 561 SDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVA 620
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
+G+IEEK+ QRQ K+ L I D++ + + +DL+DLF+F +V S+ H +
Sbjct: 621 SGSIEEKILQRQTHKKSLSSTI----IDNNESVEKHFTRDDLKDLFSFEANVLSDTHNKL 676
Query: 707 HCTRC 711
C RC
Sbjct: 677 KCKRC 681
>gi|198417079|ref|XP_002130103.1| PREDICTED: similar to RAD54-like [Ciona intestinalis]
Length = 775
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 288/643 (44%), Positives = 386/643 (60%), Gaps = 62/643 (9%)
Query: 115 FVPWGSSRPVLVTITNR----LDLPRTVENNVIEENFTLPPGVDPLVLWQPEE------P 164
F+ S+P + I N L V ++ + P D LVL+ P E
Sbjct: 92 FIKSILSKPFKIPIVNYKGSCLSRGLGVRRQLLRQPLHDPFEEDALVLYHPPELSPHEVM 151
Query: 165 QNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTL 223
+ D + V + VDP L + LRPHQREGV+F+F+CV+G+ HGCI+AD+MGLGKTL
Sbjct: 152 KMDKSKIPVHVVVDPRLSKVLRPHQREGVKFLFDCVTGV-RVKEQHGCIMADEMGLGKTL 210
Query: 224 QSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV 283
Q I L++TLL QG D P+++KA++V+P+SLV NWE E+ KW+GG+VQ +A+ ++ ++
Sbjct: 211 QCITLMWTLLKQGPDMTPIIEKAVVVSPSSLVKNWEKEVNKWLGGQVQTLAIDSGSKQEI 270
Query: 284 VSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+D F L +L++SYETFR+H+ K L+ICDE HRLKN +QT +
Sbjct: 271 DRNLDQFMSQHGRRVGLPILLISYETFRLHA-KVLHKGKIGLVICDEGHRLKNCENQTYS 329
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++V+F N G+LG A F++ +E I+ GR+ +A
Sbjct: 330 ALAKVNCKRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGTANEFKKKFEFPILRGRDSSAC 389
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
++ KKLG + EL VN I+RRT+ +LS +LP K ++CC LT LQ ELYN F +
Sbjct: 390 DDHKKLGETKLKELVDLVNLCIIRRTSDILSKYLPVKTELIICCPLTTLQFELYNSFANK 449
Query: 442 KNV---------KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
+ KR + E S L IT LKKLCNHP LIY+ +G ED
Sbjct: 450 QEFICDSIQPTKKRKKNSEGVTSGGLTAITQLKKLCNHPALIYEKCLQQE---SGCEDMR 506
Query: 493 RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLF 552
+ FP S ELSGKM ++ LL R T D+ VLVSNYTQTLDL
Sbjct: 507 KIFP---------SNFNPKLVQPELSGKMKLVDYLLAVTRTSTSDKFVLVSNYTQTLDLC 557
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
QLCR RRY ++RLDG+ +I KR K+V FN+PS EFVF+LSSKAGGCGLNLIG NRLV
Sbjct: 558 EQLCRSRRYMFVRLDGSMTIKKRAKVVEKFNNPSSPEFVFMLSSKAGGCGLNLIGANRLV 617
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
+FDPDWNPAND+QA ARVWRDGQKK FIYR L TGTIEEK++QRQ K+ L + ++
Sbjct: 618 MFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLGTGTIEEKIFQRQAHKKALSSCVVDQE 677
Query: 673 TDSSATQGNFLSTEDLRDLFT--FHDDVRSEIHENMHCTRCQN 713
D + S + LRDLF+ D +S+ H+++ CTRC N
Sbjct: 678 EDVA----RHFSRDQLRDLFSPLRQDGTQSDTHDSLRCTRCVN 716
>gi|390335885|ref|XP_783733.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/566 (46%), Positives = 364/566 (64%), Gaps = 45/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F+++CV+G G GCI+AD+MGLGKTLQ + L++T
Sbjct: 159 VHVVVDPILSKVLRPHQREGVKFLWDCVTGR-RIEGSFGCIMADEMGLGKTLQCVTLMWT 217
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + K I+V P+SLV NW EI+KW+GG+V +A+ T+ ++ +DSF
Sbjct: 218 LLRQSPDCKPEIDKVIVVAPSSLVKNWYNEIRKWLGGKVNPLAIDSGTKKEIDRNLDSFM 277
Query: 292 DPC---SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ +LI+SYETFR+H+ E L+ICDE HRLKN + T +
Sbjct: 278 RQQGRRTPTPILIISYETFRLHAEVLHKGE-VGLVICDEGHRLKNCENQTYQALNGLPGK 336
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
NDL E+F++V++ N GILG A F++ +E+ I+ GR+ A+++EK+ G
Sbjct: 337 RRVLLSGTPIQNDLLEYFSLVHYVNQGILGTAQEFKKNFESPILRGRDSCASDKEKQRGQ 396
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
E+ +L+ VN+ I+RRT +LL+ +LP K +VVCC+LT +QS +Y ++ + + +
Sbjct: 397 EKLQQLAILVNKCIIRRTASLLAKYLPVKEEQVVCCRLTXMQSCIYQQYVKAMMKECRMK 456
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
+ K S L+ IT LKKLCNHP L+YD S GF D ++ FPP G
Sbjct: 457 TQGKVS-TLSAITHLKKLCNHPALVYDKCVSSK---DGFHDMLQNFPP-----------G 501
Query: 510 GDGAWV--ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+ + ELSGKM VL +L + + D++VLVSNYTQTLD+F QLCR R Y ++RLD
Sbjct: 502 YNNKQLRPELSGKMQVLDYILAITKTSSSDKVVLVSNYTQTLDVFEQLCRLRGYLFVRLD 561
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G+ SI KR K+V+ FN+P+ EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA
Sbjct: 562 GSMSIKKRAKVVDSFNNPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 621
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKKR FIYR L+TGTIEEK++QRQ K+ L + + D S ++
Sbjct: 622 ARVWRDGQKKRCFIYRLLATGTIEEKIFQRQAHKKALSSCVVDNEEDVE----RHFSVDE 677
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
L+DLF F + S+ H+ C RC N
Sbjct: 678 LKDLFRFKEGTLSDTHDKFKCNRCIN 703
>gi|396499206|ref|XP_003845417.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
gi|312221998|emb|CBY01938.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
Length = 1469
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/580 (47%), Positives = 355/580 (61%), Gaps = 54/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ +G+++ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 204 VPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKA-NGCIMADEMGLGKTLQCIALMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GKP ++K +I P+SLV NW E+ KW+G G+ L + R
Sbjct: 263 LLKQSPDAGKPTIQKCVIACPSSLVRNWANELVKWLGKDAITPFAIDGKASKEELIQQIR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ + P VLIVSYET R++ +F + LL+CDE HRLKN ++LT
Sbjct: 323 QWSIASGRAVVRP-----VLIVSYETLRLYVDEFGQT-PIGLLLCDEGHRLKNGESLTFT 376
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP LG FR+ YE I+ GR+ T
Sbjct: 377 ALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKQYEIPILRGRDANGT 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E+ K G ER +EL VN+FI+RRTN +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 437 DEDVKKGNERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+V+ + K S+ L I LKKLCNHP L+ + PG C P +
Sbjct: 497 PDVQSLL--RGKGSQPLKVIGMLKKLCNHPDLL--NLPEDLPG------CEDVLPDDFVQ 546
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLDLFA LCR R Y
Sbjct: 547 KDARGRDREVKVWY--SGKMAVLDRMLARIRAETNDKIVLISNYTQTLDLFAALCRSRGY 604
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 605 GALRLDGTMNVSKRQKLVDKFNDPEGPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 664
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 665 ADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCV----VDSAEDVER 720
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D+ S+ H+ C RC+ +DG + I
Sbjct: 721 HFSLDSLRELFQYRDNTTSDTHDTFKCKRCRK-EDGKQII 759
>gi|167527295|ref|XP_001747980.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773729|gb|EDQ87367.1| predicted protein [Monosiga brevicollis MX1]
Length = 760
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/686 (41%), Positives = 394/686 (57%), Gaps = 94/686 (13%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
PP PL P+ + V + VDP+L LRPHQ EGVQF+++CV+GL G H
Sbjct: 124 PP---PLSAADASNPEIRNKHPVAVVVDPILGAKLRPHQIEGVQFLYDCVTGL-KIPGYH 179
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
G I+AD MGLGKTLQ++ L +TLL Q + +P + KA+IV P+SLV NW E +KW+G R
Sbjct: 180 GAIMADGMGLGKTLQNVTLTWTLLKQSPECRPTLTKAVIVCPSSLVKNWSNEFRKWLGDR 239
Query: 270 VQLIALCESTRDDVVSGIDSFTDPC--SSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
V + + D++ + F ++ QVLI+SYET R H + + ++ICDE
Sbjct: 240 VSTLPIDNGASDEIDKKLRYFGSASGRAAPQVLIISYETLRGHI--HALDQPVGIVICDE 297
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLKN + T R N+L E++A++ F NPG+LG A FR+ +
Sbjct: 298 GHRLKNSENQTYRALMALKTERRVILSGTPVQNELLEYYALLEFVNPGLLGSAGEFRKKF 357
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ GR+ AT +E++LG + +E+ VN+ ++RRT+ +LS +LPPKI VVCC+LT
Sbjct: 358 EIPILRGRDADATAQEQELGQTKLNEMVELVNRCLIRRTSDILSKYLPPKIEAVVCCRLT 417
Query: 429 PLQSELYNHFIHSKNVKRAISEE----TKQSKI-------LAYITALKKLCNHPKLIYDT 477
LQ ++Y I S+ + A+ ++ T Q K LA+IT LKKLCNHP+LI D
Sbjct: 418 GLQLDMYKRLIDSQAI--ALEDDGPGKTNQKKSGGSGPTPLAFITHLKKLCNHPELIMDK 475
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
I++ PG +D + P + R S E SGK+ V+ +L L+ TD+
Sbjct: 476 IQAREPGFAKLQDLV----PAKWDSRVVS--------PEWSGKVMVVDAMLAMLKSTTDE 523
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
++VL+SNYTQTLDLF +LCR+RRY Y+RLDGT SI KRQK+V+HFN P ++F+F+LSSK
Sbjct: 524 KVVLISNYTQTLDLFERLCRQRRYKYVRLDGTMSIKKRQKVVDHFNAPDSDDFIFMLSSK 583
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCG+NLIG +RL+L DPDWNPA+D QA AR WRDGQ++ ++YR ++TGTIEEK+ R
Sbjct: 584 AGGCGINLIGASRLILTDPDWNPASDAQALARCWRDGQRRITYVYRLVATGTIEEKILAR 643
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG 717
Q K L + E D Q +F S DLR LFT ++ S++H C RC DG
Sbjct: 644 QAHKTALSDCVIDEAED---VQRHF-SLADLRRLFTLNEGTTSDLHAQFKCGRCSR--DG 697
Query: 718 AESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHH 777
++ +K K +G P D + W H+
Sbjct: 698 TYAL----------------------------------IKPDGKPMGIP--SDFSQWDHY 721
Query: 778 FYSMSVPDAILQASAGDEVTFVFTNQ 803
V D IL + GD ++FVF Q
Sbjct: 722 PLGKGVKDRILSEAGGDLISFVFRAQ 747
>gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST]
gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST]
Length = 789
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/674 (42%), Positives = 402/674 (59%), Gaps = 87/674 (12%)
Query: 77 LSVTEGAAVCRK----PFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRL 132
LSV+E + K PFK P +N +VP S+R L
Sbjct: 52 LSVSEHELMIMKILTQPFKIPIAN------------------YVPEHSTRC--------L 85
Query: 133 DLPRTVENNVIEENFTLPPGVDPLVLWQPEE-PQNDGGNL------VPITVDPLLVRFLR 185
+ R+ + + P + LVL+ P E ++D + V + VDPLL LR
Sbjct: 86 GMKRSAARRALHD----PYACNALVLFSPPELTEHDKLKMDKSKIQVHVVVDPLLGNILR 141
Query: 186 PHQREGVQFMFECVSGLLNAAG-IHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVK 244
PHQREGV+FM++CV+G A G +GCI+AD+MGLGKTLQ I LL+TLL Q D KP +
Sbjct: 142 PHQREGVRFMYDCVTG---AKGDFNGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPTIN 198
Query: 245 KAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ---VLI 301
KAIIV P+SLV NW E KW+G RV +++ +++ ++ + S VLI
Sbjct: 199 KAIIVCPSSLVKNWYKEFGKWLGCRVNCLSIDGGSKEQTTKELEQYMANQSQRHGTPVLI 258
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------ND 342
+SYETFR+++ + SE ++CDE HRLKN + LT + ND
Sbjct: 259 ISYETFRLYAHILNSSE-VGAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLSGTPIQND 317
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E++++++F NPG+LG A FR+ +E I+ G++ +T+ E++ ER EL+A VN+
Sbjct: 318 LTEYYSLLHFVNPGMLGSTAEFRKQFENPILRGQDANSTDAEREKAAERLQELAALVNRC 377
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE--TKQS-KILA 459
++RRT+ALL+ +LP K VVC ++T +Q+ LY F+ S ++R++ E+ TK S L+
Sbjct: 378 MIRRTSALLTKYLPVKFEMVVCVRMTEVQAALYKSFLQSDTIRRSVMEKNATKASLTALS 437
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
IT+LKKLCNHP L+Y+ I+ GFE+ P + +S R EL
Sbjct: 438 NITSLKKLCNHPDLVYEKIQER---ADGFENAATILP-DNYSPRE--------LRPELGA 485
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
K+ +L +L ++ T D+IVLVSNYTQTLDLF +LCR+R Y Y+RLDGT +I KR K+V
Sbjct: 486 KLMLLDCMLASIKTNTTDKIVLVSNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVV 545
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ FN P +F+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK
Sbjct: 546 DQFNQPDSADFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKPC 605
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
FIYR L+TGTIEEK++QRQ K+ L + D++ + +DL+DLF + R
Sbjct: 606 FIYRLLATGTIEEKIFQRQTHKKALSTTV----VDNAEDGERHFTQDDLKDLFKLDEQTR 661
Query: 700 SEIHENMHCTRCQN 713
S+ H+ C RC N
Sbjct: 662 SDTHDIFRCKRCTN 675
>gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
Length = 821
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 280/584 (47%), Positives = 359/584 (61%), Gaps = 63/584 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ HGCI+AD MGLGKTLQ I+L++T
Sbjct: 216 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNA-HGCIMADGMGLGKTLQCISLMWT 274
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K II P+SLV NW E+ KW+G G+ L +
Sbjct: 275 LLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDAITPFAVDGKATKTELTTQIK 334
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
++ S P VLIVSYET R++ S LL+CDE HRLKN +LT
Sbjct: 335 QWAIASGRSVVRP-----VLIVSYETLRLYVDALKDS-PIGLLLCDEGHRLKNKDSLTWT 388
Query: 339 -----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP +LG FR+ +E I+ GR+ T
Sbjct: 389 ALNSLNVQRRVILSGTPIQNDLTEYFALLNFANPDLLGTQNEFRKRFELPILRGRDAAGT 448
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER +ELS+ VN+FI+RRTN +LS +LP K VV C L+P Q +LYNHFI S
Sbjct: 449 EEDRKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSPFQLDLYNHFIQS 508
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-GFEDCIRFFPPEMF 500
+K + K S+ L I LKKLCNHP L+ + + PG F D + PPE
Sbjct: 509 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSNDLPGCEHAFPD--DYVPPEG- 561
Query: 501 SGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 562 RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCR 612
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R Y LRLDGT ++ KRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPD
Sbjct: 613 SRGYGSLRLDGTMNVKKRQKLVDKFNDPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPD 672
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 673 WNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAE 728
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S E LR+LF F + RS+ H+ C RC+ DG + I
Sbjct: 729 DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGTQYI 770
>gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum]
Length = 729
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/592 (46%), Positives = 371/592 (62%), Gaps = 51/592 (8%)
Query: 150 PPGVDPLVLWQP------EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLL 203
P + L+L+ P E+ + DG LV + VDP L LRPHQREGV+FM++CV+G+
Sbjct: 76 PNTPNALILYSPPEQSEHEKLKGDGPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGV- 134
Query: 204 NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIK 263
GCI+AD+MGLGKTLQ I LL+TL+ QG + KP + K IIV P+SLV NW EI
Sbjct: 135 QIPNSFGCIMADEMGLGKTLQCITLLWTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEID 194
Query: 264 KWVGGRVQLIAL--CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
KW+ GR+ + + R + + F +++ VLI+SYETFRMH+ SE
Sbjct: 195 KWLKGRLSCLIMDGGPDARKKLTQFMQGFGR--TAIPVLIISYETFRMHAEILHKSE-IG 251
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + T + NDL E+F++V+F N G+LG A
Sbjct: 252 LVLCDEGHRLKNCENQTYKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQ 311
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F++ +E I+ G++ TAT+ E++ +ER ELS VN+ ++RRT+ LL+ +LP K +
Sbjct: 312 EFKKKFENPILRGQDSTATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMI 371
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISE--ETKQS-KILAYITALKKLCNHPKLIYDTIK 479
V C+LTPLQ ++Y ++I+S+ +++ + E K S LA IT LKKLCNHP LI D I
Sbjct: 372 VICQLTPLQKQIYLNYINSEGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLIMDKIL 431
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
G GFE PP ++ D +LSGK+ +L L +L+ +D++
Sbjct: 432 EGG---EGFEKSRHLLPP--------NYNDKD-VMPQLSGKLMLLDCFLANLKNNYNDKV 479
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VLVSNYTQTLDLF +LCR+R Y Y+RLDGT SI KR K+V +FNDP EF+F+LSSKAG
Sbjct: 480 VLVSNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPESGEFIFMLSSKAG 539
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL++FDPDWNPAND QA ARVWRDGQ+K +IYRFL+ GTIEEK++QRQ
Sbjct: 540 GCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQQKPCYIYRFLAAGTIEEKIFQRQA 599
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L + D++ S +LRDLF + S+ HE + C RC
Sbjct: 600 HKKALSSTV----VDNNEETARHFSVAELRDLFKL-EQTDSDTHEKLKCKRC 646
>gi|380024032|ref|XP_003695811.1| PREDICTED: DNA repair and recombination protein RAD54-like [Apis
florea]
Length = 716
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/664 (42%), Positives = 391/664 (58%), Gaps = 97/664 (14%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDPLL LRPHQREGV+FM+ECV+G G +GCI+AD+MGLGKTLQ I LL+
Sbjct: 113 LVHVVVDPLLCNILRPHQREGVKFMYECVTGK-RIEGAYGCIMADEMGLGKTLQCITLLW 171
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV----VSG 286
TLL QG + KP++ KAIIV P+SLV NW EI KW+ R+Q +A+ + D+ +
Sbjct: 172 TLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEIFKWLKNRIQPLAIDGGNKTDIDTKLIGF 231
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND-----QTLTN-- 339
+ ++ C + +LI+SYETFR+H+ + L++CDE HRLKN Q L N
Sbjct: 232 MKTYGRKCVN-PILIISYETFRLHAHILH-QDEVGLILCDEGHRLKNSENQTYQALINLK 289
Query: 340 ------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
+NDL E+F++V+F N G+LG A FR+ +E I+ G++ AT+ E+KL
Sbjct: 290 AKRRILLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTERKL 349
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
ER EL A VN+ ++RRT+ALLS +LP K VVC K+ +Q++LY +FI S ++K++
Sbjct: 350 AQERLKELVAIVNKCLIRRTSALLSKYLPLKYELVVCIKMGKVQTDLYKNFIQSDSIKKS 409
Query: 448 ISEETKQSK--------ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM 499
+ E + K L+ IT LKKLCNHP L+Y+ I + GFE+ + P
Sbjct: 410 MEENLENCKKGKRESLSTLSAITLLKKLCNHPDLVYEKILEK---SDGFENAAKLMPSN- 465
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
+S + ELSGK+ VL LL ++ T+D+IVLVSNYTQTLDLF +LC +R
Sbjct: 466 YSTKE--------ILPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCYKR 517
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
Y Y+RLDGT +I KR K+V FND + N+F+F+LSSKAGGCGLNLIG NRL++FDPDWN
Sbjct: 518 CYNYVRLDGTMTIKKRSKVVERFNDSNSNDFIFMLSSKAGGCGLNLIGANRLIMFDPDWN 577
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PAND QA ARVWRDGQKK F TGTIEEK++QRQ K+ L + ++ D +
Sbjct: 578 PANDDQAMARVWRDGQKKPCF------TGTIEEKIFQRQAHKKALSSTVVDQEEDVA--- 628
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQE 739
+ DLRDLF ++ S+ H+ C RC N G E G ++++
Sbjct: 629 -RHFTLNDLRDLFKLEENTISDTHDKFKCKRCIN---GIEVKGPPEQSDC---------- 674
Query: 740 VTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFV 799
DL++W H + ++PD L+ ++FV
Sbjct: 675 ----------------------------NSDLSDWRHVYNPRNLPDIPLRQCWLSGISFV 706
Query: 800 FTNQ 803
F ++
Sbjct: 707 FYHR 710
>gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain
protein [Tribolium castaneum]
Length = 713
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/592 (46%), Positives = 371/592 (62%), Gaps = 51/592 (8%)
Query: 150 PPGVDPLVLWQP------EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLL 203
P + L+L+ P E+ + DG LV + VDP L LRPHQREGV+FM++CV+G+
Sbjct: 60 PNTPNALILYSPPEQSEHEKLKGDGPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGV- 118
Query: 204 NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIK 263
GCI+AD+MGLGKTLQ I LL+TL+ QG + KP + K IIV P+SLV NW EI
Sbjct: 119 QIPNSFGCIMADEMGLGKTLQCITLLWTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEID 178
Query: 264 KWVGGRVQLIAL--CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
KW+ GR+ + + R + + F +++ VLI+SYETFRMH+ SE
Sbjct: 179 KWLKGRLSCLIMDGGPDARKKLTQFMQGFGR--TAIPVLIISYETFRMHAEILHKSE-IG 235
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + T + NDL E+F++V+F N G+LG A
Sbjct: 236 LVLCDEGHRLKNCENQTYKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQ 295
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F++ +E I+ G++ TAT+ E++ +ER ELS VN+ ++RRT+ LL+ +LP K +
Sbjct: 296 EFKKKFENPILRGQDSTATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMI 355
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISE--ETKQS-KILAYITALKKLCNHPKLIYDTIK 479
V C+LTPLQ ++Y ++I+S+ +++ + E K S LA IT LKKLCNHP LI D I
Sbjct: 356 VICQLTPLQKQIYLNYINSEGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLIMDKIL 415
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
G GFE PP ++ D +LSGK+ +L L +L+ +D++
Sbjct: 416 EGG---EGFEKSRHLLPP--------NYNDKD-VMPQLSGKLMLLDCFLANLKNNYNDKV 463
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VLVSNYTQTLDLF +LCR+R Y Y+RLDGT SI KR K+V +FNDP EF+F+LSSKAG
Sbjct: 464 VLVSNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPESGEFIFMLSSKAG 523
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRL++FDPDWNPAND QA ARVWRDGQ+K +IYRFL+ GTIEEK++QRQ
Sbjct: 524 GCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQQKPCYIYRFLAAGTIEEKIFQRQA 583
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+ L + D++ S +LRDLF + S+ HE + C RC
Sbjct: 584 HKKALSSTV----VDNNEETARHFSVAELRDLFKL-EQTDSDTHEKLKCKRC 630
>gi|332219863|ref|XP_003259077.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Nomascus leucogenys]
Length = 747
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/591 (47%), Positives = 376/591 (63%), Gaps = 51/591 (8%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+S V NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSXVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + + +LI+SYETFR+H S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPEEELREGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLV 542
G D FPP G + +E LSGKM VL +L R R+ D++VLV
Sbjct: 474 FVGALD---LFPP-----------GYNSKTLEPQLSGKMLVLDYILAVTRSRSSDKVVLV 519
Query: 543 SNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCG 602
SNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCG
Sbjct: 520 SNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCG 579
Query: 603 LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKE 662
LNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+
Sbjct: 580 LNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKK 639
Query: 663 GLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
L + E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 640 ALSSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 686
>gi|357631781|gb|EHJ79250.1| steroid receptor-interacting snf2 domain protein [Danaus plexippus]
Length = 764
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/596 (44%), Positives = 376/596 (63%), Gaps = 50/596 (8%)
Query: 150 PPGVDPLVLWQPEE-PQNDGGNL------VPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL++P P+++ + V + VDP+L LRPHQREGV+FM++CV+G
Sbjct: 93 PDEPNALVLYRPPYMPEHEKMKMNANEIKVAVVVDPVLGNILRPHQREGVKFMYDCVTGA 152
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
+GCI+AD+MGLGKTLQ I LL+TLL QG D KP + KAIIV P+SLV NW EI
Sbjct: 153 -QIDNAYGCIMADEMGLGKTLQCITLLWTLLRQGPDCKPTICKAIIVCPSSLVKNWYNEI 211
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV----LIVSYETFRMHSSKFSCSE 318
KW+G R+ + + ++ ++ + F + ++++V LI+SYETFR++S+ SE
Sbjct: 212 GKWLGQRINALPMDGGSKAEITLKLQQFMNTFAAIRVATPVLIISYETFRIYSNILHASE 271
Query: 319 SCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILG 359
L++CDE HRLKN + T + NDL E+F++V+F N GILG
Sbjct: 272 -VGLVLCDEGHRLKNSENQTYQALMGLKAKRRILISGTPIQNDLTEYFSLVHFVNSGILG 330
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A F++ YE I+ G++ AT +E++ E L++ VN+ ++RRT++LL+ +LP K
Sbjct: 331 TAQDFKKRYENPILKGQDALATPQERQKAQECLQTLTSIVNKCMIRRTSSLLTKYLPVKF 390
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDT 477
+V+C K+TPLQ++LY +FI+S +K + ++ + L+ IT LKKLCNHP L+YD
Sbjct: 391 EQVICVKMTPLQTQLYRNFINSDAIKNKFAGTGDKNTLSALSSITMLKKLCNHPDLVYDK 450
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
I + GFE P ++ D E SGK+ +L +L +L+ TDD
Sbjct: 451 IMER---SEGFEKGKDLLP--------SNYDIKD-VRPEYSGKLMILDCILANLKTNTDD 498
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+IVLVSNYTQTLDLF +LCR+R Y Y+RLDG+ +I KR K+V FN E++F+LSSK
Sbjct: 499 KIVLVSNYTQTLDLFEKLCRKRCYQYVRLDGSMTIKKRAKVVESFNSKESKEWIFMLSSK 558
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCGLNLIG NRL++FDPDWNPAND QA ARVWRDGQKK +IYR L+TGTIEEK++QR
Sbjct: 559 AGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKPCYIYRLLATGTIEEKIFQR 618
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
Q K+ L + + DS +++DL+DLF D+ S+ H C RC N
Sbjct: 619 QAHKKALSDTVVDQNEDSM----RHFTSDDLKDLFRLEDNTLSDTHSKFKCKRCVN 670
>gi|41055574|ref|NP_957438.1| DNA repair and recombination protein RAD54-like [Danio rerio]
gi|28277973|gb|AAH46050.1| RAD54-like (S. cerevisiae) [Danio rerio]
Length = 738
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 304/750 (40%), Positives = 422/750 (56%), Gaps = 105/750 (14%)
Query: 87 RKPF-----KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENN 141
RKP +P C++G N ++ R++ ++ +P + VL L L R
Sbjct: 46 RKPLTPLTNRPVCADG--NEHEAFIRKILSKPFKIPIPNYTGVLGL--RALGLRRAGVRK 101
Query: 142 VIEENFTLPPGVDPLVLWQPEEPQNDGGNL---------VPITVDPLLVRFLRPHQREGV 192
+ + F LVL++P P +L V + VDP+L + LRPHQREGV
Sbjct: 102 ALHDPFE----DGALVLYEP--PAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGV 155
Query: 193 QFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPT 252
+F+++CV+G +GCI+AD+MGLGKTLQ I L++TLL Q D KP + K I+V+P+
Sbjct: 156 KFLWDCVTGR-RIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPS 214
Query: 253 SLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRM 309
SLV NW E+ KW+GGRVQ +A+ ++D++ S + +F +LI+SYETFR+
Sbjct: 215 SLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRL 274
Query: 310 HSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMV 350
H+ L+ICDE HRLKN T +NDL E+F++V
Sbjct: 275 HAEVLH-KGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLV 333
Query: 351 NFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNAL 410
+F N GILG A F++ +E I+ GR+ A+++++ G ++ EL + VN+ ++RRT+ +
Sbjct: 334 HFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRRTSDI 393
Query: 411 LSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNH 470
LS +LP KI +VVCC LTPLQ ELY F+ ++ L+ IT+LKKLCNH
Sbjct: 394 LSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQTGKISVSSLSSITSLKKLCNH 453
Query: 471 PKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGH 530
P LIY+ +G GF+ + FP + +S ++ +LSGKM VL +L
Sbjct: 454 PALIYEKCLTGE---EGFDGALDLFP-QNYSTKAVE--------PQLSGKMLVLDYILAM 501
Query: 531 LRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF 590
R T D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN+PS EF
Sbjct: 502 TRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEF 561
Query: 591 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 650
+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LSTGTI
Sbjct: 562 IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTI 621
Query: 651 EEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
EEK+ QRQ K+ L + E+ D S +LR+LF+ ++ S+ H+ C R
Sbjct: 622 EEKILQRQAHKKALSSCVVDEEQDVE----RHFSLGELRELFSLNEKTLSDTHDRFRCRR 677
Query: 711 CQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEED 770
C N G + D+++ C D
Sbjct: 678 CVN---GRQVRPPPDDSDCT---------------------C-----------------D 696
Query: 771 LNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
L+NW H + D +LQAS V+FVF
Sbjct: 697 LSNWHHCADKRGLRDPVLQASWDAAVSFVF 726
>gi|407929790|gb|EKG22600.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 831
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/585 (47%), Positives = 362/585 (61%), Gaps = 55/585 (9%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+G VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD+MGLGKTLQ I
Sbjct: 221 EGRPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLVDPKA-NGCIMADEMGLGKTLQCI 279
Query: 227 ALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIAL 275
AL++TLL Q D GKP ++K +I P+SLV NW E+ KW+G G+ L
Sbjct: 280 ALMWTLLRQSPDAGKPTIQKCVIACPSSLVKNWANELVKWLGKDAINPFAVDGKASKEEL 339
Query: 276 CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
+ R ++ + P VLIVSYET R++ + S LL+CDE HRLKND+
Sbjct: 340 IQQLRQWSIASGRAVVRP-----VLIVSYETLRLYVDELK-STPIGLLLCDEGHRLKNDE 393
Query: 336 TLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
+LT +NDL E+FA++NF NP LG FR+ YE I+ GR
Sbjct: 394 SLTFTALNNLNVQKRVILSGTPIQNDLSEYFALLNFANPNYLGTKNDFRKRYELPILRGR 453
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
+ T+E++KLG ER SEL VN+FI+RRTN +LS +LP K VV C L P Q +LYN
Sbjct: 454 DADGTDEDRKLGDERLSELLTLVNKFIIRRTNDILSKYLPRKYEHVVFCNLAPFQRDLYN 513
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
FI S +++ + K S+ L I LKKLCNHP L+ + PG+ E C FP
Sbjct: 514 LFIKSPEIQQLL--RGKGSQPLKAINILKKLCNHPDLL--DLPGDLPGS---ESC---FP 563
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
+ + +W SGKM VL R+L +RQ T+D+IVL+SNYTQTLD+F +LC
Sbjct: 564 DDFVPKDARGRDRDVKSWY--SGKMAVLDRMLARIRQDTNDKIVLISNYTQTLDVFEKLC 621
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R R Y LRLDGT +++KRQKLV+ FNDP EFVFLLSSKAGGCG+NLIG NRLVLFDP
Sbjct: 622 RSRSYGCLRLDGTMNVNKRQKLVDKFNDPEGPEFVFLLSSKAGGCGINLIGANRLVLFDP 681
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA D+QA ARVWRDGQKK F+YRF+ TGTIEEK++QRQ K+ L + DS+
Sbjct: 682 DWNPAADQQALARVWRDGQKKDCFVYRFIGTGTIEEKIFQRQSHKQSLSSCV----VDSA 737
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + + S+ H+ C RC++ DG + I
Sbjct: 738 EDVERHFSLDSLRELFQYQPNTTSDTHDTFKCKRCRS--DGNQHI 780
>gi|328779113|ref|XP_392959.4| PREDICTED: Rad54 protein isoform 1 [Apis mellifera]
Length = 741
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/617 (44%), Positives = 378/617 (61%), Gaps = 66/617 (10%)
Query: 150 PPGVDPLVLWQPEEPQND-------GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + L+++ P E LV + VDPLL LRPHQREGV+FM+ECV+G
Sbjct: 110 PDEANALIVYSPSELSEHEKLKIDLSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGK 169
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
G +GCI+AD+MGLGKTLQ I LL+TLL QG + KP++ KAIIV P+SLV NW EI
Sbjct: 170 -RIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEI 228
Query: 263 KKWVGGRVQLIALCESTRDDV----VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE 318
KW+ R+Q +A+ + D+ + + ++ C + +LI+SYETFR+H+ E
Sbjct: 229 FKWLKNRIQPLAIDGGNKADIDTKLIGFMKTYGRKCVN-PILIISYETFRLHAHILHQDE 287
Query: 319 SCDLLICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILG 359
L++CDE HRLKN Q L N +NDL E+F++V+F N G+LG
Sbjct: 288 -VGLILCDEGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLG 346
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A FR+ +E I+ G++ AT+ E+KL ER EL VN+ ++RRT+ALLS +LP K
Sbjct: 347 TAQEFRKKFEIPILRGQDAAATDAERKLAQERLKELITIVNKCLIRRTSALLSKYLPLKY 406
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK--------ILAYITALKKLCNHP 471
VVC K+ +Q++LY +FI S ++K+++ E + K L+ IT LKKLCNHP
Sbjct: 407 ELVVCIKMGKIQTDLYKNFIQSDSIKKSMEENPENFKKGKRESLSTLSAITLLKKLCNHP 466
Query: 472 KLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL 531
L+Y+ I + GFE+ + P +S + ELSGK+ VL LL +
Sbjct: 467 DLVYEKILEK---SDGFENAAKLIPSN-YSTKE--------ILPELSGKLMVLDCLLASI 514
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV 591
+ T+D+IVLVSNYTQTLDLF +LC +R Y Y+RLDGT +I KR K+V FND + N+F+
Sbjct: 515 KTTTNDKIVLVSNYTQTLDLFEKLCYKRCYNYVRLDGTMTIKKRSKVVERFNDSNSNDFI 574
Query: 592 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIE 651
F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK F TGTIE
Sbjct: 575 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF------TGTIE 628
Query: 652 EKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
EK++QRQ K+ L + ++ D + + DLRDLF ++ S+ H+ C RC
Sbjct: 629 EKIFQRQAHKKALSSTVVDQEEDVA----RHFTLNDLRDLFKLEENTISDTHDKFKCKRC 684
Query: 712 QNYDDGAESIGEGDETN 728
N G E G ++++
Sbjct: 685 IN---GIEVKGPPEQSD 698
>gi|62738897|pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF
EUKARYOTIC Rad54
Length = 644
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 283/651 (43%), Positives = 383/651 (58%), Gaps = 81/651 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + VDP+L + LRPHQREGV+F+++CV+G +GCI+AD+MGLGKTLQ I L++T
Sbjct: 44 VHVVVDPVLSKVLRPHQREGVKFLWDCVTGR-RIENSYGCIMADEMGLGKTLQCITLIWT 102
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q D KP + K I+V+P+SLV NW E+ KW+GGRVQ +A+ ++D++ S + +F
Sbjct: 103 LLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFI 162
Query: 292 DPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------- 339
+LI+SYETFR+H+ L+ICDE HRLKN T
Sbjct: 163 SQQGMRIPTPILIISYETFRLHAEVLH-KGKVGLVICDEGHRLKNSDNQTYLALNSMNAQ 221
Query: 340 ----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
+NDL E+F++V+F N GILG A F++ +E I+ GR+ A+++++ G
Sbjct: 222 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGE 281
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
++ EL + VN+ ++RRT+ +LS +LP KI +VVCC LTPLQ ELY F+ ++
Sbjct: 282 QKLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQ 341
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
L+ IT+LKKLCNHP LIY+ +G G G D P+ +S ++
Sbjct: 342 TGKISVSSLSSITSLKKLCNHPALIYEKCLTGEEGFDGALDLF----PQNYSTKAVE--- 394
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+LSGKM VL +L R T D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT
Sbjct: 395 -----PQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGT 449
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
SI KR K+V FN+PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA AR
Sbjct: 450 MSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 509
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK +IYR LSTGTIEEK+ QRQ K+ L + E+ D S +LR
Sbjct: 510 VWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVE----RHFSLGELR 565
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+LF+ ++ S+ H+ C RC N G + D+++
Sbjct: 566 ELFSLNEKTLSDTHDRFRCRRCVN---GRQVRPPPDDSDCT------------------- 603
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
C DL+NW H + D +LQAS V+FVF
Sbjct: 604 --C-----------------DLSNWHHCADKRGLRDPVLQASWDAAVSFVF 635
>gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
Length = 808
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/582 (47%), Positives = 357/582 (61%), Gaps = 59/582 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ HGCI+AD MGLGKTLQ I L++T
Sbjct: 203 VPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNA-HGCIMADGMGLGKTLQCITLMWT 261
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+KA+I P +LV NW E+ KW+G G+ L R
Sbjct: 262 LLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLR 321
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET RM+S + ++ LL+CDE HRLKN + T
Sbjct: 322 QWAIASGRSVVRP-----VLIVSYETLRMNSDELRDTQ-IGLLLCDEGHRLKNADSQTYV 375
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NPGILG + F + YE I+ GR+ T
Sbjct: 376 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 435
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G ER +EL VN+FI+RR+N LLS +LP K VV C L+P Q +LYNHFI S
Sbjct: 436 DEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLSPFQLDLYNHFIQS 495
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF- 500
+K + K S+ L I LKKLCNHP L+ + PG C ++FP +M
Sbjct: 496 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--KLSEDLPG------CEQYFPEDMTV 545
Query: 501 -SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
+GR G W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R
Sbjct: 546 SNGRRGDREAK--TW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRAR 601
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
Y +RLDGT + KR KLV+ FNDP+ EFVFLLSSKAGGCG+NL+G NRLVLFDPDWN
Sbjct: 602 AYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWN 661
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA D+QA ARVWRDGQ K F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 662 PAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----IDSAEDV 717
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 718 ERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCR--PDGTQHI 757
>gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 831
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/587 (46%), Positives = 359/587 (61%), Gaps = 69/587 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD MGLGKTLQ I L++T
Sbjct: 226 VPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNA-NGCIMADGMGLGKTLQCITLMWT 284
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+KA+I P +LV NW E+ KW+G G+ L R
Sbjct: 285 LLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKAELISQLR 344
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET RM+S + ++ LL+CDE HRLKN + T
Sbjct: 345 QWAIASGRSVVRP-----VLIVSYETLRMNSDELRDTQ-IGLLLCDEGHRLKNADSQTYV 398
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NPGILG + F + YE I+ GR+ T
Sbjct: 399 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 458
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E+++ G ER +EL VN+FI+RR+N LLS +LP K VV C L P Q +LYNHFI S
Sbjct: 459 DEQQQKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQS 518
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF- 500
+K + K S+ L I LKKLCNHP L+ + PG C ++FP +M
Sbjct: 519 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--KLSEDLPG------CEQYFPEDMTV 568
Query: 501 -SGRSG-----SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
+GR G SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +
Sbjct: 569 SNGRRGDREVKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFER 619
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
LCR R Y +RLDGT + KR KLV+ FNDP+ EFVFLLSSKAGGCG+NL+G NRLVLF
Sbjct: 620 LCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLF 679
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNPA D+QA ARVWRDGQ K F+YRF++TGTIEEK++QRQ K+ L + D
Sbjct: 680 DPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VD 735
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S+ S + LR+LF F D S+ H+ C RC+ DGA+ I
Sbjct: 736 SAEDVERHFSLDSLRELFQFKPDTTSDTHDTFKCKRCR--PDGAQHI 780
>gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum
CBS 127.97]
Length = 820
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/587 (46%), Positives = 357/587 (60%), Gaps = 69/587 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ HGCI+AD MGLGKTLQ I L++T
Sbjct: 215 VPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNA-HGCIMADGMGLGKTLQCITLMWT 273
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+KA+I P +LV NW E+ KW+G G+ L R
Sbjct: 274 LLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLR 333
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET RM+S + ++ LL+CDE HRLKN + T
Sbjct: 334 QWAIASGRSVVRP-----VLIVSYETLRMNSDELRDTQ-IGLLLCDEGHRLKNADSQTYV 387
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NPGILG + F + YE I+ GR+ T
Sbjct: 388 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 447
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G ER +EL VN+FI+RR+N LLS +LP K VV C L P Q +LYNHFI S
Sbjct: 448 DEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQS 507
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF- 500
+K + K S+ L I LKKLCNHP L+ + PG C ++FP +M
Sbjct: 508 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--KLSEDLPG------CEQYFPEDMMV 557
Query: 501 -SGRSG-----SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
+GR G +W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +
Sbjct: 558 SNGRRGDREVKTW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFER 608
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
LCR R Y +RLDGT + KR KLV+ FNDP+ EFVFLLSSKAGGCG+NL+G NRLVLF
Sbjct: 609 LCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLF 668
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNPA D+QA ARVWRDGQ K F+YRF++TGTIEEK++QRQ K+ L + D
Sbjct: 669 DPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VD 724
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S+ S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 725 SAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCR--PDGTQHI 769
>gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
Length = 819
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 276/587 (47%), Positives = 356/587 (60%), Gaps = 69/587 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ GCI+AD MGLGKTLQ I L++T
Sbjct: 214 VPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNA-SGCIMADGMGLGKTLQCITLMWT 272
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK V+KA+I P +LV NW E+ KW+G G+ L R
Sbjct: 273 LLKQSPEAGKSTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLR 332
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET RM+S + ++ LL+CDE HRLKN + T
Sbjct: 333 QWAIASGRSVVRP-----VLIVSYETLRMNSDELRDTQ-IGLLLCDEGHRLKNADSQTYV 386
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NPGILG + F + YE I+ GR+ T
Sbjct: 387 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 446
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER +EL VN+FI+RR+N LLS +LP K VV C L P Q +LYNHFI S
Sbjct: 447 EEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQS 506
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + K S+ L I LKKLCNHP L+ + PG C ++FP +M S
Sbjct: 507 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--KLSEDLPG------CEKYFPEDMAS 556
Query: 502 --GRSG-----SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
GR G SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +
Sbjct: 557 SNGRRGDREVKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFER 607
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
LCR R Y +RLDGT + KR KLV+ FNDP+ EFVFLLSSKAGGCG+NL+G NRLVLF
Sbjct: 608 LCRSRGYGCIRLDGTMGVKKRSKLVDRFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLF 667
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNPA D+QA ARVWRDGQ K F+YRF++TGTIEEK++QRQ K+ L + D
Sbjct: 668 DPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VD 723
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S+ S + LR+LF F D S+ H+ C RC+ DG + I
Sbjct: 724 SAEDVERHFSLDSLRELFQFKPDTTSDTHDTFKCKRCR--PDGTQHI 768
>gi|367032442|ref|XP_003665504.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
gi|347012775|gb|AEO60259.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
Length = 804
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 293/682 (42%), Positives = 391/682 (57%), Gaps = 80/682 (11%)
Query: 74 PRVLSVTEGAAVCRKPFKPPCSNG----YDNGNDQLARRLCARKRFVPWGSSRPVLVTIT 129
P L + +GAA KP PC YD D ++ P
Sbjct: 122 PPTLGLRQGAAFIAKPLHDPCGEFAIVLYDPTIDDKPKK-------APEAGEERKDAEPP 174
Query: 130 NRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQR 189
++LD P ++ ++ G+ V Q E P+ VP+ +DP L + LRPHQ
Sbjct: 175 SKLDAP------LMHKSLAEILGIKKRV--QGEHPR------VPVVIDPRLAKVLRPHQI 220
Query: 190 EGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFD-GKPMVKKAII 248
+GV+FM+ CV+G+++ HGCI+AD+MGLGKTLQ I LL+TLL Q + GKP ++KAI+
Sbjct: 221 DGVKFMYRCVTGMIDEKA-HGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPTIQKAIV 279
Query: 249 VTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQ 298
P+SLV NW E+ KW+G G+ L R +S S T P
Sbjct: 280 ACPSSLVRNWANELTKWLGADAINPFAIDGKASKEELTRQLRQWAISTGRSITRP----- 334
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------------- 339
V+IVSYET R++ + + L++CDE HRLKN + T
Sbjct: 335 VIIVSYETLRLNVEELR-NTPIGLMLCDEGHRLKNGDSQTFNALNSLNVSRRVILSGTPI 393
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+NDL E+FA++NF NP +LG FR+ +E I+ GR+ A+E E++ G E +EL V
Sbjct: 394 QNDLSEYFALINFANPDLLGTRLEFRKRFELPILRGRDADASEAERQRGDECLAELLGIV 453
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
N+FI+RRTN +LS +LP K VV CKL P Q LYN+FI S ++ + K S+ L
Sbjct: 454 NKFIIRRTNDILSKYLPVKYEHVVFCKLAPFQLALYNYFITSPGIQALL--RGKGSQPLK 511
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
I LKKLCNHP L+ + + PG C +F+P + + W SG
Sbjct: 512 AIGILKKLCNHPDLL--DLAADLPG------CEQFWPEDYVPKEARGRDRDIRPWY--SG 561
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R Y LRLDG +++KRQKLV
Sbjct: 562 KMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRSRGYGCLRLDGAMNVNKRQKLV 621
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ FNDP+ +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA D+QA ARVWRDGQKK
Sbjct: 622 DKFNDPNGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 681
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
F+YRF++TGTIEEK++QRQ K+ L + DS+ S + LR+LF F D R
Sbjct: 682 FVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLDSLRELFQFRGDTR 737
Query: 700 SEIHENMHCTRCQNYDDGAESI 721
S+ H+ C RC+ DG + I
Sbjct: 738 SDTHDTFKCKRCR--PDGKQHI 757
>gi|425768693|gb|EKV07211.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum
PHI26]
gi|425775851|gb|EKV14096.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum Pd1]
Length = 862
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 273/575 (47%), Positives = 358/575 (62%), Gaps = 45/575 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ CV+GL++ +GCI+AD MGLGKTLQ I L++T
Sbjct: 257 VPVVIDPRLCKVLRPHQIEGVKFLYRCVTGLVDKNA-NGCIMADGMGLGKTLQCITLMWT 315
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG--GRVQLIALCESTRDDVVSGID 288
LL Q + GK ++K +I P+SLV NW E+ KW+G ++T+ ++++ I
Sbjct: 316 LLKQSSEAGKTTIQKCVIACPSSLVGNWANELVKWLGKDATTPFAIDGKATKAELITQIK 375
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT------- 338
+ VLIVSYET RM++ + LL+CDE HRLKN ++LT
Sbjct: 376 QWAIASGRGIVRPVLIVSYETLRMYADTLN-DTPIGLLLCDEGHRLKNKESLTWTALNQL 434
Query: 339 ------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+FA+++F NP +LG A FR+ +E I+ GR+ T+EEKK
Sbjct: 435 NVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQAEFRKRFELPILRGRDAAGTDEEKK 494
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
LG ER ELS VN+FI+RRTN LLS +LP K VV C ++ Q LYNHFI S ++
Sbjct: 495 LGDERLQELSGIVNKFIIRRTNELLSKYLPVKYEHVVFCNMSQFQRGLYNHFIKSPEIQS 554
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ K S+ L I LKKLCNHP L+ + + PG C FP + +
Sbjct: 555 LL--RGKGSQPLKAIGLLKKLCNHPDLL--DLANDLPG------CEHTFPEDYSPPDTRG 604
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y LRL
Sbjct: 605 RDREIKSW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRL 662
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +I KR KLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA D+QA
Sbjct: 663 DGTMNIKKRTKLVDKFNDPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQA 722
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+ S +
Sbjct: 723 LARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLD 778
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
LR+LF F D RS+ H+ C RC+ DG++ I
Sbjct: 779 SLRELFQFKPDTRSDTHDTFKCKRCR--PDGSQYI 811
>gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
Length = 853
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/571 (46%), Positives = 359/571 (62%), Gaps = 51/571 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L R LRPHQ EGV+F+++CV+G ++ +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 260 VAVVIDPRLARILRPHQIEGVKFLYKCVTGRIDKVA-NGCIMADEMGLGKTLQCIALLWT 318
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG--GRVQLIALCESTRDDVVSGID 288
LL Q GKP ++KAII P+SLV NW E+ KW+G I +ST+ +++ +
Sbjct: 319 LLKQSPLGGKPTIEKAIITCPSSLVKNWANELVKWLGKDAVTPFIVDGKSTKQELIEALL 378
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ + VLIVSYET R + +E LL+CDE HRLKN ++LT
Sbjct: 379 QWAHVRGRQITRPVLIVSYETLRSYVEYLKGAE-VGLLLCDEGHRLKNSESLTFTALNSL 437
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG+LG FR+ YE I+ GR+ +E++K+
Sbjct: 438 DVRRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQDFRKNYEIPILRGRDADGSEKDKE 497
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
LG + +ELS+ VN+FI+RRTN +LS +LP K VV C L+ Q+ LY++FI S +++
Sbjct: 498 LGDAKLAELSSIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQTALYSYFITSPEIRK 557
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP----PEMFSG 502
+ Q L I LKKLCNHP L++ T FE C + FP P+ G
Sbjct: 558 ILRGAGSQP--LKAIGILKKLCNHPDLLHIT--------EDFEGCEKLFPQGFVPKEHRG 607
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
R LSGKM VL R+L +++ TDD+IVL+SNYT TLDLF Q+CR R Y
Sbjct: 608 RDRHVDSS------LSGKMLVLERMLYRIKKETDDKIVLISNYTSTLDLFEQVCRTRGYK 661
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LRLDGT ++SKRQ+LV+ FNDP K+ FVFLLSSKAGGCG+NLIG NRL+LFDPDWNPA
Sbjct: 662 ALRLDGTMNVSKRQRLVDEFNDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAA 721
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + E D
Sbjct: 722 DQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVE----RH 777
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S ++LR LF ++ + + HE C RC+N
Sbjct: 778 FSLDNLRQLFQYNPNTVCDTHETYKCRRCKN 808
>gi|47575794|ref|NP_001001241.1| RAD54-like [Xenopus (Silurana) tropicalis]
gi|45708870|gb|AAH67986.1| RAD54-like (S. cerevisiae) [Xenopus (Silurana) tropicalis]
Length = 742
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/589 (46%), Positives = 368/589 (62%), Gaps = 51/589 (8%)
Query: 156 LVLWQPEEPQNDGGNLVPITVDPL---------LVRFLRPHQREGVQFMFECVSGLLNAA 206
LVL++P PQ +L+ + + + L + LRPHQREGV+F++ECV+G +
Sbjct: 116 LVLYEP--PQLSAHDLLKVDKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGR-RIS 172
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HG I+AD+MGLGKTLQ I L++TLL Q D KP ++KA++V P+SLV NW E+ KW+
Sbjct: 173 GSHGSIMADEMGLGKTLQCITLIWTLLRQSPDAKPEIEKAVVVCPSSLVKNWYNEVSKWL 232
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ +++++ + F + +LI+SYETFR+H+ S L+
Sbjct: 233 GGRIQPLAIDGGSKEEIDKKLSGFMNQHGMRVPSAILIISYETFRLHAEVLH-RGSVGLV 291
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 292 ICDEGHRLKNSENQTYQALNSLNTVRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEF 351
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++ +E I+ GR+ A+ +++ G E+ EL VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 352 KKRFEIPILKGRDADASAADRQKGEEKLKELIGVVNRCLIRRTSDILSKYLPVKIEQVVC 411
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQSELY F+ ++E L+ IT+LKKLCNHP LIY+
Sbjct: 412 CRLTPLQSELYKLFLKQAKPAEDLNEGKISVSSLSSITSLKKLCNHPSLIYEKCVEEE-- 469
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
GF+ + FP SG S +LSGKM VL +L R + D++VLVSN
Sbjct: 470 -EGFQGALNLFP----SGYSTK-----SVEPQLSGKMLVLDYILAVTRSTSSDKVVLVSN 519
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS EF+F+LSSKAGGCGLN
Sbjct: 520 YTQTLDLFEKLCRTRRYLYVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLN 579
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND+QA ARVWRDGQKK FIYR LSTGTIEEK++QRQ K+ L
Sbjct: 580 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCFIYRLLSTGTIEEKIFQRQTHKKAL 639
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+ E+ D S +L++LF +++ S+ H+ C RC N
Sbjct: 640 SSCVVDEEQDVE----RHFSIGELKELFILNENTTSDTHDKFKCRRCVN 684
>gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila melanogaster]
Length = 628
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 363/550 (66%), Gaps = 42/550 (7%)
Query: 185 RPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVK 244
RPHQREGV+FM+ECV G +GCI+AD+MGLGKTLQ + L++TLL QG + KP +
Sbjct: 1 RPHQREGVRFMYECVEG--KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTIN 58
Query: 245 KAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL--QVLIV 302
KAI+V+P+SLV NWE E KW+ GR+ + + T+++ + ++ F+ + L VL++
Sbjct: 59 KAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLI 118
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
SYETFR+++ + C ++ICDE HRLKN LT + NDL
Sbjct: 119 SYETFRIYA-EILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDL 177
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E++++VNF NP +LG AA F+R +E++I+ G+ +TE+E++ IE++ EL V+Q I
Sbjct: 178 TEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCI 237
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYI 461
+RRTN +L+ +LP K V+C KLT +Q ELY +F+ S V+R++++ +++ + LA I
Sbjct: 238 IRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADI 297
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
T LKK+C+HP LIY+ + + GFE+ P ++ D ELSGK
Sbjct: 298 TTLKKICSHPDLIYEKLTARE---KGFENSQNVLP--------SNYKPKDLN-PELSGKF 345
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L +L +R +D++VL+SNYTQTLDLF QL R+R+Y ++RLDGT SI KR K+V+
Sbjct: 346 MLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDR 405
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
FNDP + F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK +I
Sbjct: 406 FNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYI 465
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YR +++G+IEEK+ QRQ K+ L I D++ + + +DL+DLFTF ++ S+
Sbjct: 466 YRLVASGSIEEKILQRQTHKKSLSSTI----IDNNESAEKHFTRDDLKDLFTFDANILSD 521
Query: 702 IHENMHCTRC 711
H+ + C RC
Sbjct: 522 THDKLKCKRC 531
>gi|406862002|gb|EKD15054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 864
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 306/739 (41%), Positives = 414/739 (56%), Gaps = 102/739 (13%)
Query: 42 AADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPF----------- 90
AD D D+ N D L N R+S V V + + RK F
Sbjct: 122 GADGEQEDGDKPWTNEDRLALAN----RESNKFPVFQVKDKDTMFRKAFAVPLANKSLPS 177
Query: 91 ----KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLV--TITNRLDLPRTVENNVIE 144
+PP + G G +A+ L P G VL TI + PRT+E
Sbjct: 178 YNPNRPPPTLGLRQGAVFIAKPL-----HDPSGEFAIVLYDPTIDEK---PRTIEEARKA 229
Query: 145 ENFTLPPGVDPLV------------LWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGV 192
E+ P +PLV + + E P+ VP+ +DP L + LRPHQ EGV
Sbjct: 230 ESGEPPKIKEPLVHKSLAEILGIKKVVESERPK------VPVVIDPRLSKVLRPHQIEGV 283
Query: 193 QFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFD-GKPMVKKAIIVTP 251
+FM+ CV+G++ +GCI+AD+MGLGKTLQ IAL++TLL Q + GKP ++KAII P
Sbjct: 284 KFMYRCVTGMIEDNA-NGCIMADEMGLGKTLQCIALMWTLLKQSPEAGKPTIQKAIIACP 342
Query: 252 TSLVSNWEAEIKKWVG----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLI 301
+SLV NW E+ KW+G G+ L + R ++ S T P V+I
Sbjct: 343 SSLVKNWANELVKWLGPDAIQPFAIDGKASKEELQQQLRQWAIASGRSVTRP-----VII 397
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLTN-----------------RND 342
VSYET R++ + ++ L++CDE HRLKN QT T +ND
Sbjct: 398 VSYETLRLNVEELKNTK-IGLMLCDEGHRLKNGDSQTFTALNGLNVSRRVILSGTPIQND 456
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E+F++++F NPG+LG FR+ YE I+ GR+ ++++++ G + EL VN+F
Sbjct: 457 LTEYFSLISFANPGLLGTRMEFRKKYELPILKGRDAAGSDKDRQKGDDTVRELLGIVNKF 516
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
I+RRTN +LS +LP K VV C L P Q +LYNHFI S ++K + K S+ L I
Sbjct: 517 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNHFISSPDIKALL--RGKGSQPLKAIG 574
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
LKKLCNHP L+ + PG C ++ P + S W SGKM
Sbjct: 575 LLKKLCNHPDLL--NLPEDLPG------CDKYLPDDYVPKESRGRDRDIRPW--YSGKMQ 624
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL R+L +RQ T+D+IVL+SNYTQTLD+F +LCR+R Y LRLDGT +++KRQKLV+ F
Sbjct: 625 VLDRMLARIRQDTNDKIVLISNYTQTLDMFDKLCRDRGYGSLRLDGTMNVTKRQKLVDRF 684
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N+P +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA D+QA ARVWRDGQKK F+Y
Sbjct: 685 NNPEGSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVY 744
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEI 702
RF++TGTIEEK++QRQ K+ L + DS+ + + LR+LF +H S+
Sbjct: 745 RFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFTLDSLRELFQYHGKTTSDT 800
Query: 703 HENMHCTRCQNYDDGAESI 721
H+ C RC+ DG + I
Sbjct: 801 HDTFKCKRCK--PDGKQYI 817
>gi|239608107|gb|EEQ85094.1| DNA repair and recombination protein RAD54 [Ajellomyces
dermatitidis ER-3]
Length = 795
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/580 (46%), Positives = 358/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 190 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTLQCITLLWT 248
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P++LV NW E+ KW+G G+ L R
Sbjct: 249 LLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLR 308
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
VS + P VLIVSYET R++ + LL+CDE HRLKN QT T
Sbjct: 309 QWAVSSGRAVVRP-----VLIVSYETLRLNVDELK-DTPIGLLLCDEGHRLKNGDSQTFT 362
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F+++NF NP ILG + F + YE I+ GR+ AT
Sbjct: 363 ALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDADAT 422
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G E +EL VN+FI+RRTN +LS +LP K VV C L P Q++LYNHFI S
Sbjct: 423 DEDRKKGDESVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFIQS 482
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + + PG+ +FFP +
Sbjct: 483 PDIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLGTDLPGSE------QFFPDDYVP 532
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 533 MECRGRDRDVRSW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQY 590
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 591 GCLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 650
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 651 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 706
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F RS+ H+ C RC+ DG + I
Sbjct: 707 HFSLDSLRELFQFKPGTRSDTHDTFKCKRCR--PDGTQHI 744
>gi|261203723|ref|XP_002629075.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
gi|239586860|gb|EEQ69503.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
Length = 828
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/580 (46%), Positives = 358/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 223 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTLQCITLLWT 281
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P++LV NW E+ KW+G G+ L R
Sbjct: 282 LLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLR 341
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
VS + P VLIVSYET R++ + LL+CDE HRLKN QT T
Sbjct: 342 QWAVSSGRAVVRP-----VLIVSYETLRLNVDELK-DTPIGLLLCDEGHRLKNGDSQTFT 395
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F+++NF NP ILG + F + YE I+ GR+ AT
Sbjct: 396 ALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDADAT 455
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G E +EL VN+FI+RRTN +LS +LP K VV C L P Q++LYNHFI S
Sbjct: 456 DEDRKKGDESVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFIQS 515
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + + PG+ +FFP +
Sbjct: 516 PDIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLGTDLPGSE------QFFPDDYVP 565
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 566 MECRGRDRDVRSW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQY 623
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 624 GCLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 683
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 684 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 739
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F RS+ H+ C RC+ DG + I
Sbjct: 740 HFSLDSLRELFQFKPGTRSDTHDTFKCKRCR--PDGTQHI 777
>gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
Length = 831
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/576 (47%), Positives = 355/576 (61%), Gaps = 57/576 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ +G+++ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 204 VPVVIDPRLSKVLRPHQVEGVKFLYRATTGMIDPKA-NGCIMADEMGLGKTLQCIALMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++K +I P+SLV NW E+ KW+G G+ L + R
Sbjct: 263 LLKQSPDAGKSTIQKCVIACPSSLVRNWANELVKWLGPDAVTPFAIDGKASKDELIQQIR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET R++ +F ++ L++CDE HRLKN +LT
Sbjct: 323 QWSIASGRSVVRP-----VLIVSYETLRLYVEEFGQTQ-IGLMLCDEGHRLKNGDSLTFT 376
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP LG FR++YE I+ GR+ T
Sbjct: 377 ALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPILRGRDANGT 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E+ K G ER +EL VN+FI+RRTN +LS +LP K VV C L P Q ELYNHFI S
Sbjct: 437 DEDVKKGNERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKELYNHFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT--TGFEDCIRFFPPEM 499
+V+ + K S+ L I LKKLCNHP L+ + PG T ED F P+
Sbjct: 497 PDVQSLL--RGKGSQPLKVIGMLKKLCNHPDLL--ELPQDLPGCEHTLPED----FVPKD 548
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
GR V SGKM VL R+L +R T+D+IVL+SNYTQTLD+FA LCR R
Sbjct: 549 ARGRDRE------VKVWYSGKMLVLDRMLARIRAETNDKIVLISNYTQTLDIFAALCRSR 602
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
Y LRLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWN
Sbjct: 603 GYGCLRLDGTMNVSKRQKLVDKFNDPEGPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWN 662
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 663 PAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCV----VDSAEDV 718
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
S + LR+LF + ++ S+ H+ C RC+ D
Sbjct: 719 ERHFSLDSLRELFQYRNNTTSDTHDTFKCKRCRKED 754
>gi|146324514|ref|XP_751168.2| dsDNA-dependent ATPase Rad54 [Aspergillus fumigatus Af293]
gi|129557284|gb|EAL89130.2| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus
Af293]
Length = 807
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 278/583 (47%), Positives = 356/583 (61%), Gaps = 61/583 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD MGLGKTLQ I+L++T
Sbjct: 202 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDKNA-NGCIMADGMGLGKTLQCISLMWT 260
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K II P+SLV NW E+ KW+G G+ L +
Sbjct: 261 LLKQSPEAGKSTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQIK 320
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
++ + P VLIVSYET RM+ S LL+CDE HRLKN +LT
Sbjct: 321 QWAIASGRAVVRP-----VLIVSYETLRMYVDALKDS-PIGLLLCDEGHRLKNKDSLTWT 374
Query: 339 -----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ T
Sbjct: 375 ALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAAGT 434
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER +ELS VN+FI+RRTN +LS +LP K VV C L+ Q +LYNHFI S
Sbjct: 435 EEDRKKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSQFQLDLYNHFIQS 494
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + K S+ L I LKKLCNHP L+ T T ED + PPE
Sbjct: 495 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLLDLTRDLPGCEHTFPED---YVPPEA-R 548
Query: 502 GRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 549 GRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRS 599
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R Y LRLDGT +I+KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDW
Sbjct: 600 RGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDW 659
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 660 NPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAED 715
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S E LR+LF F + RS+ H+ C RC+ DG + I
Sbjct: 716 VERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGTQYI 756
>gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
Length = 682
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 280/585 (47%), Positives = 359/585 (61%), Gaps = 65/585 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD MGLGKTLQ I+L++T
Sbjct: 77 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNA-NGCIMADGMGLGKTLQCISLMWT 135
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K II P+SLV NW E+ KW+G G+V L +
Sbjct: 136 LLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDAVTPFAVDGKVPKAELTSQIK 195
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
++ S P VLIVSYET RM+ S LL+CDE HRLKN ++LT
Sbjct: 196 QWAIASGRSVVRP-----VLIVSYETLRMYVDALKDS-PIGLLLCDEGHRLKNKESLTWT 249
Query: 339 -----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ T
Sbjct: 250 ALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAAGT 309
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER ELS VN+FI+RRTN +LS +LP K VV C L+ Q LYNHFI S
Sbjct: 310 EEDRKKGDERLLELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSQFQLGLYNHFIQS 369
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT--TGFEDCIRFFPPEM 499
+K + K S+ L I LKKLCNHP L+ + PG T ED + PPE
Sbjct: 370 PEIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--DLSRDLPGCEHTYPED---YVPPEA 422
Query: 500 FSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LC
Sbjct: 423 -RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLC 472
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R R Y LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCGLNLIG NRLVLFDP
Sbjct: 473 RSRGYGSLRLDGTMTVNKRQKLVDKFNDPNGEEFVFLLSSKAGGCGLNLIGANRLVLFDP 532
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 533 DWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSA 588
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S E LR+LF F + RS+ H+ C RC+ DG + I
Sbjct: 589 EDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGTQHI 631
>gi|391867384|gb|EIT76630.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 811
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/586 (46%), Positives = 359/586 (61%), Gaps = 61/586 (10%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G VP+ +DP L + LRPHQ EGV+F++ C +G+++ HGCI+AD MGLGKTLQ I+L
Sbjct: 203 GPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNA-HGCIMADGMGLGKTLQCISL 261
Query: 229 LYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCE 277
++TLL Q + GK +++K II P+SLV NW E+ KW+G G+ L
Sbjct: 262 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTS 321
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
+ ++ + P VLIVSYET RM+ S LL+CDE HRLKN +L
Sbjct: 322 QIKQWAIASGRAVVRP-----VLIVSYETLRMYVEALKDS-PIGLLLCDEGHRLKNKDSL 375
Query: 338 T-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T +NDL E+FA++NF NP +LG FR+ +E I+ GR+
Sbjct: 376 TWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDA 435
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
++E+KK G E +ELS VN+FI+RRTN +L+ +LP K VV C L+ Q +LYNHF
Sbjct: 436 AGSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHF 495
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++ + K S+ L I LKKLCNHP L+ + + PG F + PPE
Sbjct: 496 IQSPEIRSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCE-FAFPEDYVPPE 550
Query: 499 MFSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +L
Sbjct: 551 A-RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKL 600
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
CR R Y LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFD
Sbjct: 601 CRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFD 660
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS
Sbjct: 661 PDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDS 716
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ S E LR+LF F + RS+ H+ C RC+ DGA+ I
Sbjct: 717 AEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGAQFI 760
>gi|327349292|gb|EGE78149.1| DsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis ATCC 18188]
Length = 849
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/580 (46%), Positives = 358/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 244 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTLQCITLLWT 302
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P++LV NW E+ KW+G G+ L R
Sbjct: 303 LLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLR 362
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
VS + P VLIVSYET R++ + LL+CDE HRLKN QT T
Sbjct: 363 QWAVSSGRAVVRP-----VLIVSYETLRLNVDELK-DTPIGLLLCDEGHRLKNGDSQTFT 416
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F+++NF NP ILG + F + YE I+ GR+ AT
Sbjct: 417 ALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDADAT 476
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G E +EL VN+FI+RRTN +LS +LP K VV C L P Q++LYNHFI S
Sbjct: 477 DEDRKKGDESVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFIQS 536
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + + PG+ +FFP +
Sbjct: 537 PDIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLGTDLPGSE------QFFPDDYVP 586
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 587 MECRGRDRDVRSWY--SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQY 644
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 645 GCLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 704
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 705 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 760
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F RS+ H+ C RC+ DG + I
Sbjct: 761 HFSLDSLRELFQFKPGTRSDTHDTFKCKRCR--PDGTQHI 798
>gi|119472846|ref|XP_001258430.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL
181]
gi|119406582|gb|EAW16533.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL
181]
Length = 835
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/583 (47%), Positives = 356/583 (61%), Gaps = 61/583 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD MGLGKTLQ I+L++T
Sbjct: 230 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNA-NGCIMADGMGLGKTLQCISLMWT 288
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K II P+SLV NW E+ KW+G G+ L +
Sbjct: 289 LLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQIK 348
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
++ + P VLIVSYET RM+ S LL+CDE HRLKN +LT
Sbjct: 349 QWAIASGRAVVRP-----VLIVSYETLRMYVDALKDS-PIGLLLCDEGHRLKNKDSLTWT 402
Query: 339 -----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ T
Sbjct: 403 ALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAAGT 462
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER +ELS VN+FI+RRTN +LS +LP K VV C L+ Q +LYNHFI S
Sbjct: 463 EEDRKKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSRFQLDLYNHFIQS 522
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + K S+ L I LKKLCNHP L+ T T ED + PPE
Sbjct: 523 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLLDLTRDLPGCEHTFPED---YVPPEA-R 576
Query: 502 GRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 577 GRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRS 627
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R Y LRLDGT +I+KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDW
Sbjct: 628 RGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDW 687
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 688 NPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAED 743
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S E LR+LF F + RS+ H+ C RC+ DG + I
Sbjct: 744 VERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGTQYI 784
>gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 815
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/586 (46%), Positives = 359/586 (61%), Gaps = 61/586 (10%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G VP+ +DP L + LRPHQ EGV+F++ C +G+++ HGCI+AD MGLGKTLQ I+L
Sbjct: 207 GPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNA-HGCIMADGMGLGKTLQCISL 265
Query: 229 LYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCE 277
++TLL Q + GK +++K II P+SLV NW E+ KW+G G+ L
Sbjct: 266 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTS 325
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
+ ++ + P VLIVSYET RM+ S LL+CDE HRLKN +L
Sbjct: 326 QIKQWAIASGRAVVRP-----VLIVSYETLRMYVEALKDS-PIGLLLCDEGHRLKNKDSL 379
Query: 338 T-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T +NDL E+FA++NF NP +LG FR+ +E I+ GR+
Sbjct: 380 TWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDA 439
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
++E+KK G E +ELS VN+FI+RRTN +L+ +LP K VV C L+ Q +LYNHF
Sbjct: 440 AGSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHF 499
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++ + K S+ L I LKKLCNHP L+ + + PG F + PPE
Sbjct: 500 IQSPEIRSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCE-FAFPEDYVPPE 554
Query: 499 MFSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +L
Sbjct: 555 A-RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKL 604
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
CR R Y LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFD
Sbjct: 605 CRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFD 664
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS
Sbjct: 665 PDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDS 720
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ S E LR+LF F + RS+ H+ C RC+ DGA+ I
Sbjct: 721 AEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGAQFI 764
>gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40]
Length = 827
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/586 (46%), Positives = 359/586 (61%), Gaps = 61/586 (10%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G VP+ +DP L + LRPHQ EGV+F++ C +G+++ HGCI+AD MGLGKTLQ I+L
Sbjct: 219 GPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNA-HGCIMADGMGLGKTLQCISL 277
Query: 229 LYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCE 277
++TLL Q + GK +++K II P+SLV NW E+ KW+G G+ L
Sbjct: 278 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTS 337
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
+ ++ + P VLIVSYET RM+ S LL+CDE HRLKN +L
Sbjct: 338 QIKQWAIASGRAVVRP-----VLIVSYETLRMYVEALKDS-PIGLLLCDEGHRLKNKDSL 391
Query: 338 T-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T +NDL E+FA++NF NP +LG FR+ +E I+ GR+
Sbjct: 392 TWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDA 451
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
++E+KK G E +ELS VN+FI+RRTN +L+ +LP K VV C L+ Q +LYNHF
Sbjct: 452 AGSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHF 511
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++ + K S+ L I LKKLCNHP L+ + + PG F + PPE
Sbjct: 512 IQSPEIRSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCE-FAFPEDYVPPE 566
Query: 499 MFSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +L
Sbjct: 567 A-RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKL 616
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
CR R Y LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFD
Sbjct: 617 CRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFD 676
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS
Sbjct: 677 PDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDS 732
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ S E LR+LF F + RS+ H+ C RC+ DGA+ I
Sbjct: 733 AEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGAQFI 776
>gi|342885327|gb|EGU85368.1| hypothetical protein FOXB_04079 [Fusarium oxysporum Fo5176]
Length = 805
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/580 (46%), Positives = 361/580 (62%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+GL++ +GCI+AD+MGLGKTLQ I+L++T
Sbjct: 204 VPVVIDPKLAKILRPHQVEGVKFMYRCVTGLIDEKA-NGCIMADEMGLGKTLQCISLMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GKP ++KAI+V P SLV NW E+ KW+G G+ L R
Sbjct: 263 LLKQSPDAGKPTIQKAIVVCPASLVKNWANELVKWLGPNAINPFAIDGKASKEELTRQLR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ + T P V+IVSYET R++ + ++ LL CDE HRLKN + T
Sbjct: 323 QWAIASGRAVTRP-----VIIVSYETLRLNVEELKHTK-IGLLFCDEGHRLKNSDSNTFN 376
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++ +F NP +LG FR+ YE I+ GR+ A+
Sbjct: 377 ALNSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADAS 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G E ++ L VN+F++RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 437 EEDRKKGDECTAALLNVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ E C FP +
Sbjct: 497 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--NMADDLPGS---EQC---FPDDYVP 546
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S +W SGKM VL R+L +RQ T+D+IVL+SNYT TLDLF ++CR R+Y
Sbjct: 547 KESRGRDREIKSW--YSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFERMCRSRQY 604
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 605 GCLRLDGTMNVNKRQKLVDRFNDPEGDEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 664
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 665 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 720
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D +S+ HE C RC+ DG + I
Sbjct: 721 HFSLDSLRELFQYRPDTKSDTHETFKCKRCK--PDGKQYI 758
>gi|159130376|gb|EDP55489.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus
A1163]
Length = 681
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/583 (47%), Positives = 356/583 (61%), Gaps = 61/583 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD MGLGKTLQ I+L++T
Sbjct: 76 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDKNA-NGCIMADGMGLGKTLQCISLMWT 134
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K II P+SLV NW E+ KW+G G+ L +
Sbjct: 135 LLKQSPEAGKSTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQIK 194
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
++ + P VLIVSYET RM+ S LL+CDE HRLKN +LT
Sbjct: 195 QWAIASGRAVVRP-----VLIVSYETLRMYVDALKDS-PIGLLLCDEGHRLKNKDSLTWT 248
Query: 339 -----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ T
Sbjct: 249 ALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAAGT 308
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER +ELS VN+FI+RRTN +LS +LP K VV C L+ Q +LYNHFI S
Sbjct: 309 EEDRKKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSQFQLDLYNHFIQS 368
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + K S+ L I LKKLCNHP L+ T T ED + PPE
Sbjct: 369 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLLDLTRDLPGCEHTFPED---YVPPEA-R 422
Query: 502 GRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 423 GRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRS 473
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R Y LRLDGT +I+KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDW
Sbjct: 474 RGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDW 533
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 534 NPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAED 589
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S E LR+LF F + RS+ H+ C RC+ DG + I
Sbjct: 590 VERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGTQYI 630
>gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980]
gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 861
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/572 (46%), Positives = 356/572 (62%), Gaps = 55/572 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 260 VPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRA-NGCIMADEMGLGKTLQCITLMWT 318
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GKP + KAII P+SLV NW E+ KW+G G+ L + R
Sbjct: 319 LLKQSTDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLR 378
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S T P V+IVSYET R++ + ++ L++CDE HRLKN + T
Sbjct: 379 QWAIASGRSITRP-----VIIVSYETLRLYVDELKHTQ-IGLMLCDEGHRLKNGDSQTFV 432
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++V+F NPG+LG FR+ YE I GR+ +
Sbjct: 433 ALNSLNVTRRVILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGS 492
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+++++ G E +L VN+FI+RRTN +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 493 DKDRQKGDECIKDLLNVVNKFIIRRTNDILSKYLPVKYEHVVFCSLAPFQLDLYNHFITS 552
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + PG C +++P E +
Sbjct: 553 PDIKALL--RGKGSQPLKAIGMLKKLCNHPDLL--NLSDDLPG------CEKYWP-EDYV 601
Query: 502 GRSGSWTGGD-GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+ G D W SGKM VL R+L +RQ T+D+IVL+SNYTQTLD+F +LCR R
Sbjct: 602 PKDGRGRDRDIKPW--YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDMFDKLCRNRG 659
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y LRLDGT +++KRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNP
Sbjct: 660 YGSLRLDGTMNVTKRQKLVDKFNDPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNP 719
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 720 AADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVE 775
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LF + D S+ H+ C RC+
Sbjct: 776 RHFSLDSLRELFQYRKDTTSDTHDTFKCKRCK 807
>gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb03]
Length = 821
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 359/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
+P+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 216 IPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTLQCITLLWT 274
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P++LV NW E+ KW+G G+ L R
Sbjct: 275 LLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQLR 334
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+S + P VLIVSYET R++ + ++ LL+CDE HRLKN QT T
Sbjct: 335 QWAISSGRAVVRP-----VLIVSYETLRLNVDEIKDTQ-IGLLLCDEGHRLKNGDSQTFT 388
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F+++NF NP ILG + F + +E I+ GR+ T
Sbjct: 389 ALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGT 448
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G E +EL A VN+FI+RRTN +LS +LP K VV C L P Q++LYN+FI S
Sbjct: 449 DEDRKKGDETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQS 508
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + + PG C +FFP +
Sbjct: 509 PDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLGADLPG------CEQFFPDDYIP 558
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S +W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 559 IESRGRDRDVRSW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRQY 616
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDG+ +++KRQKLV+ FNDP EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 617 GCLRLDGSMNVTKRQKLVDKFNDPEGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 676
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 677 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 732
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F RS+ H+ C RC DG + I
Sbjct: 733 HFSLDSLRELFQFKPGTRSDTHDTFKCKRCG--PDGTQHI 770
>gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 812
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 353/580 (60%), Gaps = 54/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ +G+++ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 204 VPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKA-NGCIMADEMGLGKTLQCIALMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P+SLV NW E+ KW+G G+ L + R
Sbjct: 263 LLKQSPEAGKSTIQKCVIACPSSLVRNWANELIKWLGKDAVTPFAIDGKASKEELIQQIR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET R+++ +F L++CDE HRLKN +LT
Sbjct: 323 QWSIASGRSVVRP-----VLIVSYETLRLYADEFG-QTPIGLMLCDEGHRLKNGDSLTFT 376
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP LG FR++YE I+ GR+ T
Sbjct: 377 ALNNLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPILKGRDANGT 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E+ K G ER +EL VN+FI+RRTN +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 437 DEDVKKGTERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+V+ + K S+ L I LKKLCNHP L+ + PG C P +
Sbjct: 497 PDVQSLL--RGKGSQPLKVIGMLKKLCNHPDLL--NLPEDLPG------CENTLPDDFVQ 546
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLD+FA LCR R Y
Sbjct: 547 KDARGRDREVKTW--YSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRGY 604
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
RLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 605 GCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 664
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 665 ADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCV----VDSAEDVER 720
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + ++ S+ H+ C RC+ +DG + I
Sbjct: 721 HFSLDSLRELFQYRNNTTSDTHDTFKCKRCRK-EDGRQII 759
>gi|336272956|ref|XP_003351233.1| RAD54 protein [Sordaria macrospora k-hell]
gi|380092753|emb|CCC09506.1| putative RAD54 protein [Sordaria macrospora k-hell]
Length = 824
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 361/580 (62%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 206 VPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 264
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 265 LLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 324
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ S T P V+IVSYET R+++ + + L++CDE HRLKN QT +
Sbjct: 325 QWAIASGRSVTRP-----VIIVSYETLRLNADELKGT-PIGLMLCDEGHRLKNGDSQTFS 378
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 379 ALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADAS 438
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E +EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+F+ S
Sbjct: 439 EAERKRGDECLAELLAVVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVAS 498
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + + PG C +++P +
Sbjct: 499 PDIQALL--RGKGSQPLKAINMLKKLCNHPDLL--DLSADLPG------CEQYWPDDYVP 548
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 549 KEARGRDRDVKPW--YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQY 606
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 607 GCLRLDGTMNVNKRQKLVDKFNDPEGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 666
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 667 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 722
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LFT+ +S+ H+ C RC+ DG + I
Sbjct: 723 HFSLDSLRELFTYRGGTKSDTHDTFKCKRCK--PDGRQYI 760
>gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
Length = 682
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 275/586 (46%), Positives = 359/586 (61%), Gaps = 61/586 (10%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G VP+ +DP L + LRPHQ EGV+F++ C +G+++ HGCI+AD MGLGKTLQ I+L
Sbjct: 74 GPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNA-HGCIMADGMGLGKTLQCISL 132
Query: 229 LYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCE 277
++TLL Q + GK +++K II P+SLV NW E+ KW+G G+ L
Sbjct: 133 MWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTS 192
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
+ ++ + P VLIVSYET RM+ S LL+CDE HRLKN +L
Sbjct: 193 QIKQWAIASGRAVVRP-----VLIVSYETLRMYVEALKDS-PIGLLLCDEGHRLKNKDSL 246
Query: 338 T-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T +NDL E+FA++NF NP +LG FR+ +E I+ GR+
Sbjct: 247 TWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDA 306
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
++E+KK G E +ELS VN+FI+RRTN +L+ +LP K VV C L+ Q +LYNHF
Sbjct: 307 AGSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHF 366
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++ + K S+ L I LKKLCNHP L+ + + PG F + PPE
Sbjct: 367 IQSPEIRSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCE-FAFPEDYVPPE 421
Query: 499 MFSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +L
Sbjct: 422 A-RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKL 471
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
CR R Y LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFD
Sbjct: 472 CRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFD 531
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS
Sbjct: 532 PDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDS 587
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ S E LR+LF F + RS+ H+ C RC+ DGA+ I
Sbjct: 588 AEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGAQFI 631
>gi|400592549|gb|EJP60713.1| DNA repair protein, SNF2 family [Beauveria bassiana ARSEF 2860]
Length = 721
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 291/682 (42%), Positives = 393/682 (57%), Gaps = 78/682 (11%)
Query: 74 PRVLSVTEGAAVCRKPFKPPCSNG----YDNGNDQLARRLCARKRFVPWGSSRPVLVTIT 129
P L + GA KP P YD D P +P V
Sbjct: 37 PPTLGLRRGAVFVAKPLHDPSGEFAIVLYDPTIDD-----------KPKAVEQPAPVDEN 85
Query: 130 NRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQR 189
+ + R +++ ++ ++ T G+ V + E P+ VP+ +DP L + LRPHQ
Sbjct: 86 EQQENIRQLDSPLVHKSLTEILGIKKTV--EKEHPR------VPVVLDPRLTKILRPHQV 137
Query: 190 EGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFD-GKPMVKKAII 248
EGV+FM+ CVSGL++ +GCI+AD+MGLGKTLQ I LL+TLL Q D GKP ++KAI+
Sbjct: 138 EGVKFMYRCVSGLIDTKA-NGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKPTIQKAIV 196
Query: 249 VTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQ 298
V P SLV NW E+ KW+G G+ L R ++ S T P
Sbjct: 197 VCPASLVKNWANELIKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTRP----- 251
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT-----LTN-------------- 339
V+IVSYET R++ + ++ LL CDE HRLKN + L N
Sbjct: 252 VIIVSYETLRLNVEELKHTK-IGLLFCDEGHRLKNGDSNTFNALNNLNVSRRVILTGTPI 310
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+NDL E+F++ +F NP +LG FR+ +E I+ GR+ A+EE+K+ G ++EL V
Sbjct: 311 QNDLTEYFSLTSFANPELLGSRLEFRKRFEIPILRGRDADASEEDKQRGDACTTELLGIV 370
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
N+F++RRTN +LS +LP K VV C L P Q +LYN+FI S +++ + K S+ L
Sbjct: 371 NKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALL--RGKGSQPLK 428
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
I LKKLCNHP L+ + PG+ E C FP + + W SG
Sbjct: 429 AINILKKLCNHPDLL--VLDEDLPGS---EYC---FPSDYIPKEARGRDREVKPWY--SG 478
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL R+L +RQ T+D+IVL+SNYT TLDLF +LCR R+Y LRLDGT +++KRQKLV
Sbjct: 479 KMQVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGCLRLDGTMNVNKRQKLV 538
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ FNDP +EFVFLLSSKAGGCG+NLIG NRL+LFDPDWNPA D+QA ARVWRDGQKK
Sbjct: 539 DRFNDPEGDEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDC 598
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
F+YRF++TGTIEEK++QRQ K+ L + DS+ S + LR+LF + D R
Sbjct: 599 FVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSRDSLRELFQYRSDTR 654
Query: 700 SEIHENMHCTRCQNYDDGAESI 721
S+ H+ C RC+ DG + I
Sbjct: 655 SDTHDTFRCKRCR--PDGTQYI 674
>gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb18]
Length = 863
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 359/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
+P+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 258 IPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTLQCITLLWT 316
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P++LV NW E+ KW+G G+ L R
Sbjct: 317 LLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQLR 376
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+S + P VLIVSYET R++ + ++ LL+CDE HRLKN QT T
Sbjct: 377 QWAISSGRAVVRP-----VLIVSYETLRLNVDEIKDTQ-IGLLLCDEGHRLKNGDSQTFT 430
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F+++NF NP ILG + F + +E I+ GR+ T
Sbjct: 431 ALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGT 490
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G E +EL A VN+FI+RRTN +LS +LP K VV C L P Q++LYN+FI S
Sbjct: 491 DEDRKKGDETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQS 550
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + + PG C +FFP +
Sbjct: 551 PDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLGADLPG------CEQFFPDDYIP 600
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S +W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 601 IESRGRDRDVRSW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRQY 658
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDG+ +++KRQKLV+ FNDP EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 659 GCLRLDGSMNVTKRQKLVDKFNDPEGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 718
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 719 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 774
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F RS+ H+ C RC DG + I
Sbjct: 775 HFSLDSLRELFQFKPGTRSDTHDTFKCKRCG--PDGTQHI 812
>gi|345564001|gb|EGX46983.1| hypothetical protein AOL_s00097g222 [Arthrobotrys oligospora ATCC
24927]
Length = 1390
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/572 (45%), Positives = 363/572 (63%), Gaps = 54/572 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L + LRPHQ EGV+F++ +GL+++ HGCI+AD+MGLGKTLQ I L++T
Sbjct: 212 VAVVIDPRLAKVLRPHQIEGVKFLYRATTGLIDSKA-HGCIMADEMGLGKTLQCITLMWT 270
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q + G+P ++K +I P+SLV NW E+ KW+G G + A+ ++T+++++S +
Sbjct: 271 LLKQSPEAGRPTIRKCVIACPSSLVRNWANELVKWLGEGTIHPFAVDGKATKEELISQLK 330
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ + VLIVSYET R+++ + +E L++CDE HRLKN ++LT
Sbjct: 331 QWAIASGNQVVRPVLIVSYETLRLYAKELGSTE-IGLMLCDEGHRLKNGESLTFTALTEL 389
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NP LG A FR+ YE I+ GR+ + E+ ++
Sbjct: 390 NVKRRVILSGTPIQNDLTEYFSLLNFANPDYLGSRADFRKKYEMPILRGRDANSDEKTRE 449
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G ER EL VN+FI+RRTN +LS +LP K VV C L P Q +LYNHF+ S V++
Sbjct: 450 KGDERLKELFGLVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQRDLYNHFVTSSEVRK 509
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIY--DTIKSGNPGTTGFEDCIRFFP----PEMF 500
+ K L I LKKLCNHP L+ D + +FFP P+
Sbjct: 510 LL--RGVGCKPLKAINVLKKLCNHPDLLELPDDLHGSE----------QFFPSDFVPKAA 557
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
GR G + V SGKM VL R+L +RQ T+D+IVL+SNYTQTLD+F +L R +
Sbjct: 558 RGRDGRYVN-----VCYSGKMLVLDRMLARIRQDTNDKIVLISNYTQTLDVFEKLARSKG 612
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y +LRLDGT +++KRQKLV+ FN+P +EF+FLLSSKAGGCGLNLIG NRLVLFDPDWNP
Sbjct: 613 YGFLRLDGTMNVNKRQKLVDKFNNPDGDEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNP 672
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + E D G
Sbjct: 673 AADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFG 732
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
+EDLR LF ++ + RS+ H+ C RC+
Sbjct: 733 ----SEDLRKLFEYNTNTRSDTHDTFKCKRCK 760
>gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
Length = 812
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/580 (46%), Positives = 353/580 (60%), Gaps = 54/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ +G+++ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 204 VPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKA-NGCIMADEMGLGKTLQCIALMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P+SLV NW E+ KW+G G+ L + R
Sbjct: 263 LLKQSPEAGKSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ + P VLIVSYET R+++ +F L++CDE HRLKN +LT
Sbjct: 323 QWSIASGRAVVRP-----VLIVSYETLRLYAEEFG-QTPIGLMLCDEGHRLKNGDSLTFT 376
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP LG FR++YE I+ GR+ T
Sbjct: 377 ALNNLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPILKGRDANGT 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E+ K G ER +EL VN+FI+RRTN +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 437 DEDVKKGTERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+V+ + K S+ L I LKKLCNHP L+ + PG C P +
Sbjct: 497 PDVQSLL--RGKGSQPLKVIGMLKKLCNHPDLL--NLPEDLPG------CENTLPDDFVQ 546
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLD+FA LCR R Y
Sbjct: 547 KDARGRDREVKTW--YSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRGY 604
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
RLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 605 GCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 664
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 665 ADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCV----VDSAEDVER 720
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + ++ S+ H+ C RC+ +DG + I
Sbjct: 721 HFSLDSLRELFQYRNNTMSDTHDTFKCKRCRK-EDGRQVI 759
>gi|347827598|emb|CCD43295.1| similar to DNA repair and recombination protein RAD54 [Botryotinia
fuckeliana]
Length = 862
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/572 (46%), Positives = 356/572 (62%), Gaps = 55/572 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 261 VPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRA-NGCIMADEMGLGKTLQCITLMWT 319
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
+L Q D GKP + KAII P+SLV NW E+ KW+G G+ L + R
Sbjct: 320 MLKQSTDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLR 379
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S T P V+IVSYET R++ + ++ L++CDE HRLKN + T
Sbjct: 380 QWAIASGRSITRP-----VIIVSYETLRLYVDELKHTQ-IGLMLCDEGHRLKNGDSQTFV 433
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++V+F NPG+LG FR+ YE I GR+ +
Sbjct: 434 ALNSLNVTRRVILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGS 493
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+++++ G E EL VN+FI+RRTN +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 494 DKDRQKGDECIKELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQLDLYNHFITS 553
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + PG C +++P E +
Sbjct: 554 PDIKALL--RGKGSQPLKAIGMLKKLCNHPDLL--NLSEDLPG------CEQYWP-EDYV 602
Query: 502 GRSGSWTGGD-GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+ G D W SGKM VL R+L +RQ T+D+IVL+SNYTQTLD+F +LCR R
Sbjct: 603 PKDGRGRDRDIKPW--YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDMFDKLCRSRG 660
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y LRLDGT +++KRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNP
Sbjct: 661 YGSLRLDGTMNVTKRQKLVDKFNDPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNP 720
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 721 AADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVE 776
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LF + D S+ H+ C RC+
Sbjct: 777 RHFSLDSLRELFQYRKDTTSDTHDTFKCKRCK 808
>gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
Length = 808
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/580 (46%), Positives = 358/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I+L++T
Sbjct: 203 VPVVIDPRLSKILRPHQIEGVKFLYRCTTGMIDENA-NGCIMADEMGLGKTLQCISLMWT 261
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + G+ V+K +I P++LV NW E+ KW+G G+ L +
Sbjct: 262 LLKQSPEAGRTTVQKCVIACPSTLVRNWANELVKWLGPDAVTPFVIDGKATKAELSSQLK 321
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
++ S P VLIVSYET R++ LL+CDE HRLKN ++LT +
Sbjct: 322 QWAIASGRSIVRP-----VLIVSYETLRLNVEDLK-DTPIGLLLCDEGHRLKNKESLTWK 375
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+FA+V+F NP +LG FR+ +E I+ GR+ A+
Sbjct: 376 ELNSLNVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKKFEIPILRGRDAAAS 435
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G ER SELSA VN+FI+RRTN +LS +LP K VV C L+ Q LYNHF+ S
Sbjct: 436 DEDRKKGDERLSELSAIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSEFQLNLYNHFLSS 495
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++ + K S+ L I LKKLCNHP L+ + PG C ++FP +
Sbjct: 496 PEIRSLL--RGKGSQPLKAIGLLKKLCNHPDLL--DLARDLPG------CEQYFPDDYVP 545
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 546 PDGRGRDRDIKSWY--SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAY 603
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 604 GCLRLDGTMNVNKRQKLVDKFNDPNGEEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPA 663
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 664 ADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVER 719
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F D RS+ H+ C RC+ DG + I
Sbjct: 720 HFSLDSLRELFQFKPDTRSDTHDTFKCKRCR--PDGTQHI 757
>gi|340931904|gb|EGS19437.1| DNA repair and recombination protein RAD54-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 838
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 361/580 (62%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 237 VPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMIDPKA-NGCIMADEMGLGKTLQCITLLWT 295
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP ++KAI+ P+SLV NW E+ KW+G G+ L
Sbjct: 296 LLKQSPEAGKPTIEKAIVACPSSLVRNWANELVKWLGKDAINPFTIDGKASKEELTRQLH 355
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S T P V+IVSYET R++ + L++CDE HRLKN + T
Sbjct: 356 QWAIASGRSVTRP-----VIIVSYETLRLNVEALKGT-PIGLMLCDEGHRLKNGDSQTFN 409
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NP +LG A FR+ +E I+ GR+ A+
Sbjct: 410 ALNSLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGSRAEFRKRFELPILRGRDADAS 469
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E +EL + VN+FI+RRTN LLS +LP K VV C L P Q++LYN+FI S
Sbjct: 470 EAERKRGDECLAELLSIVNKFIIRRTNDLLSKYLPVKYEHVVFCNLAPFQADLYNYFITS 529
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG C ++FP +
Sbjct: 530 PDIQALL--RGKGSQPLKAIGILKKLCNHPDLL--DLPGDLPG------CEQYFPEDFVP 579
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ +W SGKM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 580 KDARGRDRDVKSWY--SGKMIVLDRMLARIRAETNDKIVLISNYTQTLDLFERLCRSRGY 637
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQ+LV+ FNDP+ +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 638 GCLRLDGTMNVNKRQRLVDKFNDPNGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 697
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 698 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSYCV----VDSAEDVER 753
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D RS+ H+ C RC+ DG + I
Sbjct: 754 HFSLDALRELFQYRPDTRSDTHDTFKCKRCK--PDGKQFI 791
>gi|402223361|gb|EJU03425.1| DNA repair protein SNF2 family [Dacryopinax sp. DJM-731 SS1]
Length = 831
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/584 (46%), Positives = 357/584 (61%), Gaps = 64/584 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP+L + LRPHQ EGV+F+++C +G + +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 216 VPVVIDPVLGKVLRPHQVEGVKFLYKCTTGAI-VENAYGCIMADEMGLGKTLQCIALMHT 274
Query: 232 LLCQGFDG-KPMVKKAIIVTPTSLVSNWEAEIKKWVG--GRVQLIA---------LCEST 279
LL Q KP + KAII P+SLV NW E+ KW+G G +++ L ES
Sbjct: 275 LLKQSPRAQKPTIDKAIIACPSSLVKNWGNELVKWLGKDGAPGILSVDNKGTKAELIESV 334
Query: 280 RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
+ V +G + T P V+IVSYET R ++ E LL+CDE HRLKN +LT
Sbjct: 335 KRWVAAGGRNVTQP-----VMIVSYETLRTLCAELMNCE-IGLLLCDEGHRLKNSDSLTF 388
Query: 340 R-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+ NDL E+F+++NF NP LG FR+ +E +I+ GR+ A
Sbjct: 389 QALNGLKVQRRVILSGTPIQNDLSEYFSLLNFANPDYLGSRMEFRKNFELAILRGRDADA 448
Query: 381 TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
T++EK+ + EL+ +V++FI+RRTN LLS +LP K VV C L+PLQ LY HFI
Sbjct: 449 TDKEKENSEAKLKELAERVSKFIIRRTNDLLSKYLPVKYEHVVFCTLSPLQLALYRHFIK 508
Query: 441 SKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE-- 498
S +R + + Q L I LKKLCNHP+L+ + PG C PPE
Sbjct: 509 SPETQRLLRGQGSQP--LKAINLLKKLCNHPELL--NLPEDLPG------CDSVLPPEYG 558
Query: 499 --MFSG-------RSGSWTG-GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
++ G R G G+ E GK VL R L +++ T+D+IVL+SNYTQT
Sbjct: 559 NSLYGGPKVSRAERGARDRGMGEDVRCEWGGKFLVLERFLDRIKRETNDKIVLISNYTQT 618
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
LDLF ++CR +RY + RLDGT S+ KRQKLV+ FNDP EFVFLLSSKAGGCG+NLIG
Sbjct: 619 LDLFEKMCRSKRYGFFRLDGTMSVVKRQKLVDQFNDPEGKEFVFLLSSKAGGCGINLIGA 678
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
NRL+LFDPDWNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ K+ L +
Sbjct: 679 NRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQAQKQALSSCV 738
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
E+ D+ S +DLR LF F D+ E H+ C RC+
Sbjct: 739 VDEKEDAE----RHFSADDLRKLFLFKDNTHCETHDTFKCKRCK 778
>gi|336467451|gb|EGO55615.1| hypothetical protein NEUTE1DRAFT_86106 [Neurospora tetrasperma FGSC
2508]
gi|350287905|gb|EGZ69141.1| hypothetical protein NEUTE2DRAFT_115349 [Neurospora tetrasperma
FGSC 2509]
Length = 835
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/571 (46%), Positives = 356/571 (62%), Gaps = 53/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 213 VPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 271
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 272 LLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 331
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ S T P V+IVSYET R++ + + L++CDE HRLKN QT +
Sbjct: 332 QWAIASGRSVTRP-----VIIVSYETLRLNVDELKGT-PIGLMLCDEGHRLKNGDSQTFS 385
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 386 ALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADAS 445
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+F+ S
Sbjct: 446 EAERKRGDECLVELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVAS 505
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + + PG C +++P +
Sbjct: 506 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--DLSADLPG------CEQYWPEDYVP 555
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 556 KEARGRDRDVKPW--YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQY 613
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 614 GCLRLDGTMNVNKRQKLVDKFNDPEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 673
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 674 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 729
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LFT+ +S+ H+ C RC+
Sbjct: 730 HFSLDSLRELFTYRPGTKSDTHDTFKCKRCK 760
>gi|67538714|ref|XP_663131.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
gi|40743497|gb|EAA62687.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
Length = 1776
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/580 (46%), Positives = 350/580 (60%), Gaps = 58/580 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ VQF++ C +G+++ HGCI+AD MGLGKTLQ I+L++T
Sbjct: 231 VPVVIDPRLAKVLRPHQ---VQFLYRCTTGMIDRNA-HGCIMADGMGLGKTLQCISLMWT 286
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K II P+SLV NW E+ KW+G G+ L +
Sbjct: 287 LLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAVDGKASKTELTSQLK 346
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
+S S P VLIVSYET RM+ S LL+CDE HRLKN ++LT
Sbjct: 347 QWAISSGRSIVRP-----VLIVSYETLRMYVDTLKDS-PIGLLLCDEGHRLKNKESLTWT 400
Query: 339 -----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP +LG FR+ +E I+ GR+ T
Sbjct: 401 ALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFEIPILKGRDAAGT 460
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER +ELS+ VN+FI+RRTN +LS +LP K VV C L+ Q +LY HFI S
Sbjct: 461 EEDRKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSQFQLDLYKHFIDS 520
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + K S+ L I LKKLCNHP L+ + + PG C FP +
Sbjct: 521 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSTDLPG------CEHAFPDDYVP 570
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 571 VEARGRDRDVRPWY--SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAY 628
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT ++ KRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 629 GCLRLDGTMNVKKRQKLVDKFNDPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 688
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 689 ADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVER 744
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 745 HFSLDSLRELFQFKPGTTSDTHDTFKCKRCRA--DGTQYI 782
>gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa]
Length = 831
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/571 (46%), Positives = 356/571 (62%), Gaps = 53/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 209 VPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 267
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 268 LLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 327
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ S T P V+IVSYET R++ + + L++CDE HRLKN QT +
Sbjct: 328 QWAIASGRSVTRP-----VIIVSYETLRLNVDELKGT-PIGLMLCDEGHRLKNGDSQTFS 381
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 382 ALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADAS 441
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+F+ S
Sbjct: 442 EAERKRGDECLVELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVAS 501
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + + PG C +++P +
Sbjct: 502 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--DLSADLPG------CEQYWPEDYVP 551
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 552 KEARGRDRDVKPW--YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQY 609
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 610 GCLRLDGTMNVNKRQKLVDKFNDPEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 669
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 670 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 725
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LFT+ +S+ H+ C RC+
Sbjct: 726 HFSLDSLRELFTYRPGTKSDTHDTFKCKRCK 756
>gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 682
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 359/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
+P+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 77 IPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTLQCITLLWT 135
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P++LV NW E+ KW+G G+ L R
Sbjct: 136 LLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVIDGKATKAELTSQLR 195
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+S + P VLIVSYET R++ + ++ LL+CDE HRLKN QT T
Sbjct: 196 QWAISSGRAVVRP-----VLIVSYETLRLNVDEIKDTQ-IGLLLCDEGHRLKNGDSQTFT 249
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F+++NF NP ILG + F + +E I+ GR+ T
Sbjct: 250 ALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGT 309
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G E +EL A VN+FI+RRTN +LS +LP K VV C L P Q++LYN+FI S
Sbjct: 310 DEDRKKGDETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQS 369
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + + PG C +FFP +
Sbjct: 370 PDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLGADLPG------CEQFFPEDYIP 419
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S +W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 420 IESRGRDRDVRSWY--SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRQY 477
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDG+ +++KRQKLV+ FNDP EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 478 GCLRLDGSMNVTKRQKLVDKFNDPEGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 537
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 538 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 593
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F RS+ H+ C RC DG + I
Sbjct: 594 HFSLDSLRELFQFKPVTRSDTHDTFKCKRCG--PDGTQHI 631
>gi|392862807|gb|EAS36523.2| SNF2 family domain-containing protein [Coccidioides immitis RS]
Length = 797
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 353/580 (60%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 192 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNA-NGCIMADEMGLGKTLQCITLLWT 250
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+K +I P +LV NW E+ KW+G G+ L R
Sbjct: 251 LLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLR 310
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ P VLIVSYET R++ + LL+CDE HRLKN QT T
Sbjct: 311 QWAIASGRQVVRP-----VLIVSYETLRLNVGELK-ETPIGLLLCDEGHRLKNGESQTFT 364
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+++++NFTNPG+LG + F + +E I+ GR+ T
Sbjct: 365 ALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDADGT 424
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEE+K G E +EL VN+FI+RR+N +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 425 EEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQS 484
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K + K S+ L I LKKLCNHP L+ + + PG+ +FFP +
Sbjct: 485 PDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSADLPGSE------QFFPDDYVP 534
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 535 PEGRGRDRDVKSWY--SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGY 592
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT ++ KRQKLV+ FNDP EFVFLLSSKAGGCG+NL+G NRLVLFDPDWNPA
Sbjct: 593 GSLRLDGTMTVKKRQKLVDRFNDPDGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPA 652
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 653 ADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCV----VDSAEDVER 708
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 709 HFSLDSLRELFQFKPGTTSDTHDTFKCRRCR--PDGTQFI 746
>gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 799
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/584 (46%), Positives = 356/584 (60%), Gaps = 63/584 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 194 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNA-NGCIMADEMGLGKTLQCITLLWT 252
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+K +I P +LV NW E+ KW+G G+ L R
Sbjct: 253 LLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLR 312
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ P VLIVSYET R++ + LL+CDE HRLKN QT T
Sbjct: 313 QWAIASGRQVVRP-----VLIVSYETLRLNVGELK-ETPIGLLLCDEGHRLKNGESQTFT 366
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+++++NFTNPG+LG + F + +E I+ GR+ T
Sbjct: 367 ALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDADGT 426
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEE+K G E +EL VN+FI+RR+N +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 427 EEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQS 486
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG-FEDCIRFFPPEMF 500
++K + K S+ L I LKKLCNHP L+ + + PG+ F D + PPE
Sbjct: 487 PDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSADLPGSEQLFPD--DYVPPEG- 539
Query: 501 SGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 540 RGRDRDVKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCR 590
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R Y LRLDGT ++ KRQKLV+ FNDP EFVFLLSSKAGGCG+NL+G NRLVLFDPD
Sbjct: 591 SRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFVFLLSSKAGGCGINLVGANRLVLFDPD 650
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 651 WNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCV----VDSAE 706
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 707 DVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCR--PDGTQFI 748
>gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 797
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/584 (46%), Positives = 356/584 (60%), Gaps = 63/584 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 192 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNA-NGCIMADEMGLGKTLQCITLLWT 250
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+K +I P +LV NW E+ KW+G G+ L R
Sbjct: 251 LLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLR 310
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ P VLIVSYET R++ + LL+CDE HRLKN QT T
Sbjct: 311 QWAIASGRQVVRP-----VLIVSYETLRLNVGELK-ETPIGLLLCDEGHRLKNGESQTFT 364
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+++++NFTNPG+LG + F + +E I+ GR+ T
Sbjct: 365 ALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDADGT 424
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEE+K G E +EL VN+FI+RR+N +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 425 EEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQS 484
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG-FEDCIRFFPPEMF 500
++K + K S+ L I LKKLCNHP L+ + + PG+ F D + PPE
Sbjct: 485 PDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSADLPGSEQLFPD--DYVPPEG- 537
Query: 501 SGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 538 RGRDRDVKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCR 588
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R Y LRLDGT ++ KRQKLV+ FNDP EFVFLLSSKAGGCG+NL+G NRLVLFDPD
Sbjct: 589 SRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFVFLLSSKAGGCGINLVGANRLVLFDPD 648
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 649 WNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCV----VDSAE 704
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 705 DVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCR--PDGTQFI 746
>gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
Length = 805
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/583 (46%), Positives = 363/583 (62%), Gaps = 61/583 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I+L++T
Sbjct: 204 VPVVIDPKLAKILRPHQVEGVKFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCISLMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++KAI+V P SLV NW E+ KW+G G+ L R
Sbjct: 263 LLKQSPEAGKSTIQKAIVVCPASLVKNWANELVKWLGANAIHPFAIDGKASKEELTRQLR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT---- 336
++ S T P V+IVSYET R++ + ++ LL CDE HRLKN +
Sbjct: 323 QWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLLFCDEGHRLKNGDSNTFN 376
Query: 337 ------LTNR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+T R NDL E+F++ +F NP +LG FR+ +E I+ GR+ A+
Sbjct: 377 ALNSLNVTRRVILTGTPIQNDLTEYFSLTSFANPNLLGTRQEFRKRFEIPILRGRDADAS 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E ++K G E + EL + VN+F++RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 437 EADRKKGDECTGELLSVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ G C F P+
Sbjct: 497 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLSDDLPGSEGC--CPEDFVPKESR 550
Query: 502 GRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
GR SW SGKM VL R+L +RQ T+D+IVL+SNYT TLDLF +LCR
Sbjct: 551 GRDREVKSW---------YSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFERLCRS 601
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R+Y LRLDGT +++KRQKLV+ FNDP+ +EFVFLLSSKAGGCG+NLIG NRLVLFDPDW
Sbjct: 602 RQYGCLRLDGTMNVNKRQKLVDRFNDPNGDEFVFLLSSKAGGCGINLIGANRLVLFDPDW 661
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 662 NPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAED 717
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + + +S+ HE C RC+ DG + I
Sbjct: 718 VERHFSLDSLRELFQYRPNTKSDTHETFKCRRCK--PDGKQYI 758
>gi|440638315|gb|ELR08234.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Geomyces destructans 20631-21]
Length = 810
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/571 (46%), Positives = 354/571 (61%), Gaps = 53/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM++CV+G+++ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 209 VPVVIDPRLAKVLRPHQIEGVKFMYKCVTGMIDDRA-NGCIMADEMGLGKTLQCITLMWT 267
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GKP ++K II P+SLV NW E+ KW+G G+ L + R
Sbjct: 268 LLKQSTDAGKPTIQKVIIACPSSLVQNWANELVKWLGKGAIVPFAIDGKASKEELTQQLR 327
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ + T P V+IVSYET R++ + ++ L++CDE HRLKN QT T
Sbjct: 328 QWAIASGRAVTRP-----VIIVSYETLRLNVDELKNTQ-IGLMLCDEGHRLKNGDSQTFT 381
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++V+F NP +LG FR+ YE I+ GR+ T
Sbjct: 382 ALNNLNVSRRVILSGTPIQNDLSEYFSLVSFANPDLLGTRLEFRKKYELPILKGRDAAGT 441
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+++++ G + EL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 442 DKDRERGDDCLRELLGVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQLDLYNYFITS 501
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + K S+ L I LKKLCNHP L+ + PG C ++FP +
Sbjct: 502 PEIKALL--RGKGSQPLKAIGMLKKLCNHPDLL--NLSDDLPG------CEQYFPEDYVP 551
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +RQ T+D+IVL+SNYTQTLD+F +LCR R Y
Sbjct: 552 KDARGRDRDVKPW--YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDIFDKLCRSRGY 609
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 610 GSLRLDGTMNVSKRQKLVDKFNDPDGPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 669
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 670 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 725
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
+ + LR+LF +H S+ H+ C RC+
Sbjct: 726 HFTLDSLRELFQYHGKTTSDTHDTFKCKRCK 756
>gi|395858245|ref|XP_003801483.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Otolemur garnettii]
Length = 739
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/581 (46%), Positives = 362/581 (62%), Gaps = 43/581 (7%)
Query: 156 LVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
LVL++P ++ + D NL V + VDP+L + LRPHQREGV+F++ECV+ G
Sbjct: 118 LVLYEPPLLSAHDQLKLDKENLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIPGS 176
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+GG
Sbjct: 177 HGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGG 236
Query: 269 RVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLIC 325
R+Q +A+ ++D++ ++ F + +LI+SYETFR+H S L+IC
Sbjct: 237 RIQPLAIDGGSKDEIDRKLEGFMSQHGARVPSPILIISYETFRLHVGVLQ-KGSVGLVIC 295
Query: 326 DEAHRLKNDQTLTNR-NDLEEFFAMVNFT------------NPGILGDAAYFRRYYETSI 372
DE L + +L+ R + V P LG A F++++E I
Sbjct: 296 DEV--LDSASSLSGRRKSVSSLSTAVQELRHCCLAGPGWGFKPATLGTAHEFKKHFELPI 353
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
+ GR+ A+E +++LG ER EL+ VN+ ++RRT+ +LS +LP KI EVVCC+LTPLQ+
Sbjct: 354 LKGRDAAASEADRQLGEERLRELTTIVNRCLIRRTSDILSKYLPVKIEEVVCCRLTPLQT 413
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
ELY F+ + E L+ IT+LKKLCNHP LIYD GFE +
Sbjct: 414 ELYKRFLRQAKPAEELREGKISVSSLSSITSLKKLCNHPALIYDKCVEEE---AGFEGAL 470
Query: 493 RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLF 552
FPP S G +LSGKM VL +L R R++D++VLVSNYTQTLDLF
Sbjct: 471 DVFPPGYSS---------KGLEPQLSGKMLVLDYILAVTRSRSNDKVVLVSNYTQTLDLF 521
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
+LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NRLV
Sbjct: 522 EKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLV 581
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L + E+
Sbjct: 582 MFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEE 641
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
D S +L++LF + S+ H+ +HC RC N
Sbjct: 642 QDVE----RHFSLGELKELFILEEASLSDTHDRLHCRRCVN 678
>gi|451853165|gb|EMD66459.1| hypothetical protein COCSADRAFT_298475 [Cochliobolus sativus
ND90Pr]
Length = 812
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/581 (46%), Positives = 355/581 (61%), Gaps = 56/581 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ +G+++ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 204 VPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKA-NGCIMADEMGLGKTLQCITLMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++K +I P+SLV NW E+ KW+G G+ L + R
Sbjct: 263 LLKQSPDAGKSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ + P VLIVSYET R++ +F L++CDE HRLKN +LT
Sbjct: 323 QWSIASGRAVVRP-----VLIVSYETLRLYVDEFG-QTPIGLMLCDEGHRLKNGDSLTFT 376
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NPG LG FR+ +E I+ GR+ T
Sbjct: 377 ALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFRKQFEIPILKGRDANGT 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + + G ER +EL VN+FI+RRTN +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 437 DADVQKGTERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+V+ + K S+ L I LKKLCNHP L+ + PG ED + PE F
Sbjct: 497 PDVQSLL--RGKGSQPLKVIGMLKKLCNHPDLL--NLPEDLPGC---EDKL----PEDFV 545
Query: 502 GRSGSWTGGDG-AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+ G D V SGKM VL R+L +R T+D+IVL+SNYTQTLD+FA LCR R
Sbjct: 546 QKDAR--GRDREVKVWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRG 603
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y RLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNP
Sbjct: 604 YGCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNP 663
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 664 AADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCV----VDSAEDVE 719
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D+ S+ H+ C RC+ +DG + I
Sbjct: 720 RHFSLDSLRELFQYRDNTTSDTHDTFKCKRCRK-EDGKQII 759
>gi|367047285|ref|XP_003654022.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
gi|347001285|gb|AEO67686.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
Length = 807
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/580 (46%), Positives = 358/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 206 VPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 264
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 265 LLKQSPDAGKTTIQKAIVACPSSLVRNWANELTKWLGADAITPFAIDGKASKEELTRQLR 324
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ + T P V+IVSYET R++ + + L++CDE HRLKN + T
Sbjct: 325 QWAIASGRAITRP-----VIIVSYETLRLNVEELK-NTPIGLMLCDEGHRLKNGDSQTFN 378
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 379 ALNSLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGSRLEFRKRFELPILRGRDADAS 438
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E +EL A VN+FI+RRTN +LS +LP K VV C L P Q LYN+FI S
Sbjct: 439 EAERKRGDECLAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQQALYNYFITS 498
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + + PG C +++P +
Sbjct: 499 PDIQALL--RGKGSQPLKAIGILKKLCNHPDLL--DLAADLPG------CEQYWPDDYVP 548
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 549 KEARGRDRDIKPWY--SGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRSRGY 606
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 607 GCLRLDGTMNVNKRQKLVDKFNDPDGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 666
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 667 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 722
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D RS+ H+ C RC+ DG + I
Sbjct: 723 HFSLDSLRELFQYRPDTRSDTHDTFKCKRCR--PDGRQHI 760
>gi|358385618|gb|EHK23214.1| hypothetical protein TRIVIDRAFT_220490 [Trichoderma virens Gv29-8]
Length = 802
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/571 (46%), Positives = 354/571 (61%), Gaps = 53/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP + + LRPHQ EGV+FM++CV+G ++ HGCI+AD+MGLGKTLQ I L++T
Sbjct: 201 VPVVIDPKIAKCLRPHQIEGVKFMYKCVTGQVDEKA-HGCIMADEMGLGKTLQCITLMWT 259
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++KAI+V P SLV NW E+ KW+G G+ + R
Sbjct: 260 LLKQSPNAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEEMKRQLR 319
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN------- 333
++ S T P V+IVSYET R++ + ++ LL CDE HRLKN
Sbjct: 320 QWAIASGRSITRP-----VIIVSYETLRVNVEELKHTK-VGLLFCDEGHRLKNADSTTFS 373
Query: 334 ---DQTLTNR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
D +T R NDL E+FA+ NF NP +LG FR+ +E I+ GR+ A+
Sbjct: 374 ALNDLNVTRRVILTGTPIQNDLTEYFALTNFANPDLLGSRLEFRKRFEIPILRGRDANAS 433
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E++ G E + EL VN+F++RRTN LLS +LP K VV C L P Q +LYN+FI S
Sbjct: 434 EHERQRGDECTGELLGIVNRFLIRRTNDLLSKYLPVKYEHVVFCNLAPFQIDLYNYFITS 493
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
N++ + K S+ L I LKKLCNHP L+ + PG+ E C FP +
Sbjct: 494 PNIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLSDDLPGS---EKC---FPEDYVP 543
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R+ T+D+IVL+SNYT TLDLF +LCRER+Y
Sbjct: 544 KEARGRDRDIKPW--YSGKMQVLDRMLAKIREDTNDKIVLISNYTSTLDLFERLCRERQY 601
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ +EF+FLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 602 GSLRLDGTMTVNKRQKLVDRFNDPNGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPA 661
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQ K F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 662 ADQQALARVWRDGQTKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 717
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LF + D S+ H+ C RC+
Sbjct: 718 HFSLDSLRELFQYRPDTTSDTHDTFRCKRCK 748
>gi|408389789|gb|EKJ69216.1| hypothetical protein FPSE_10614 [Fusarium pseudograminearum CS3096]
Length = 805
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/575 (45%), Positives = 364/575 (63%), Gaps = 45/575 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM++CV+GL++ +GCI+AD+MGLGKTLQ I+L++T
Sbjct: 204 VPVVIDPRLAKILRPHQVEGVKFMYQCVTGLIDEKA-NGCIMADEMGLGKTLQCISLMWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR-VQLIAL-CESTRDDVVSGID 288
LL Q D GK ++KAI+V P SLV NW E+ KW+G + A+ ++++D++ +
Sbjct: 263 LLKQSPDAGKSTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKDELTRQLR 322
Query: 289 SF---TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ T + V+IVSYET R++ + ++ LL CDE HRLKN + T
Sbjct: 323 QWAHATGRSVTRPVIIVSYETLRLNVEELKNTK-IGLLFCDEGHRLKNSDSNTFNALNSL 381
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F++ +F NP +LG FR+ YE I+ GR+ A+E ++K
Sbjct: 382 NVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEADRK 441
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G E ++ L VN+F++RRTN +LS +LP K VV C L P Q +LYN+FI S ++
Sbjct: 442 KGDECTAALLGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPEIQA 501
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ K S+ L I LKKLCNHP L+ + PG+ E C +P + +
Sbjct: 502 LL--RGKGSQPLKAINILKKLCNHPDLL--NMSDDLPGS---EKC---YPDDYVPKEARG 551
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+W SGKM VL R+L +RQ T+D+IVL+SNYT TLDLF +LCR R+Y LRL
Sbjct: 552 RDREVKSW--YSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLRL 609
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +++KRQKLV+ FNDP +EF+FLLSSKAGGCG+NLIG NRLVLFDPDWNPA D+QA
Sbjct: 610 DGTMNVNKRQKLVDRFNDPEGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQA 669
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+ S +
Sbjct: 670 LARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLD 725
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
LR+LF + D +S+ HE C RC+ DG + I
Sbjct: 726 SLRELFQYRSDTKSDTHETFKCKRCK--PDGKQYI 758
>gi|259485020|tpe|CBF81736.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 833
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/580 (46%), Positives = 350/580 (60%), Gaps = 58/580 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ VQF++ C +G+++ HGCI+AD MGLGKTLQ I+L++T
Sbjct: 231 VPVVIDPRLAKVLRPHQ---VQFLYRCTTGMIDRNA-HGCIMADGMGLGKTLQCISLMWT 286
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K II P+SLV NW E+ KW+G G+ L +
Sbjct: 287 LLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAVDGKASKTELTSQLK 346
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
+S S P VLIVSYET RM+ S LL+CDE HRLKN ++LT
Sbjct: 347 QWAISSGRSIVRP-----VLIVSYETLRMYVDTLKDS-PIGLLLCDEGHRLKNKESLTWT 400
Query: 339 -----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP +LG FR+ +E I+ GR+ T
Sbjct: 401 ALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFEIPILKGRDAAGT 460
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EE++K G ER +ELS+ VN+FI+RRTN +LS +LP K VV C L+ Q +LY HFI S
Sbjct: 461 EEDRKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSQFQLDLYKHFIDS 520
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + K S+ L I LKKLCNHP L+ + + PG C FP +
Sbjct: 521 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSTDLPG------CEHAFPDDYVP 570
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 571 VEARGRDRDVRPW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAY 628
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT ++ KRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 629 GCLRLDGTMNVKKRQKLVDKFNDPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 688
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 689 ADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVER 744
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 745 HFSLDSLRELFQFKPGTTSDTHDTFKCKRCRA--DGTQYI 782
>gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
Length = 808
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/575 (45%), Positives = 360/575 (62%), Gaps = 45/575 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKTLQ I+L++T
Sbjct: 203 VPVVIDPRLAKILRPHQIEGVKFLYRCTTGMIDENA-NGCIMADEMGLGKTLQCISLMWT 261
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG--GRVQLIALCESTRDDVVSGID 288
LL Q + GK V+K +I P++LV NW E+ KW+G + + ++T+ ++ S +
Sbjct: 262 LLKQSPEAGKTTVQKCVIACPSTLVRNWANELVKWLGPDAVIPFVIDGKATKAELSSQLK 321
Query: 289 SFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ VLIVSYET R++ LL+CDE HRLKN ++LT +
Sbjct: 322 QWAIASGRAIVRPVLIVSYETLRLNIEDLR-DTPIGLLLCDEGHRLKNKESLTWKELNSL 380
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL E+FA+V+F NP +LG FR+ +E I+ GR+ A++E++K
Sbjct: 381 NVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKRFEIPILRGRDAAASDEDRK 440
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G ER +ELS VN+FI+RRTN +LS +LP K VV C L+ Q LYN+F+ S ++
Sbjct: 441 KGDERLAELSTIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSEFQLNLYNYFLQSPEIRS 500
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ K S+ L I LKKLCNHP L+ + PG C ++FP +
Sbjct: 501 LL--RGKGSQPLKAIGLLKKLCNHPDLL--DLSRDLPG------CEQYFPDDYVPPDGRG 550
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y LRL
Sbjct: 551 RDRDIKSWY--SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRARAYGCLRL 608
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA D+QA
Sbjct: 609 DGTMNVNKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQA 668
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+ S +
Sbjct: 669 LARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLD 724
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
LR+LF F D RS+ H+ C RC+ DG + I
Sbjct: 725 SLRELFQFKPDTRSDTHDTFKCKRCR--PDGIQHI 757
>gi|323450700|gb|EGB06580.1| hypothetical protein AURANDRAFT_71986 [Aureococcus anophagefferens]
Length = 1131
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 298/743 (40%), Positives = 398/743 (53%), Gaps = 116/743 (15%)
Query: 41 SAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDN 100
+ A AP E+ K N DA G++ V R+S +P +LS T A R+ FK
Sbjct: 31 AVAARAPEVENFKRDNEDAERGGDVEVVRRSFMPGILSTT--AVTVRQGFKSIGGKRSKR 88
Query: 101 GNDQLARRLCARKRFVPWGSSRPVLV--------TITNRLDLPRTVENNVIEENFTLPPG 152
++ L ++ RKR G L + LDL T +++ EE P
Sbjct: 89 ADELLKQKSLGRKRIKGVGLQSKFLSGRDFAAGQVVAPMLDLSFTTDDSAKEEEEAEEPA 148
Query: 153 V-------DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
+PLVL++P + + + G V I V P+L ++LRPHQREGVQF+FECV G+ +
Sbjct: 149 RRGAYREHEPLVLYEPTDDEVEAGAEV-IEVPPILCQWLRPHQREGVQFVFECVYGMKDY 207
Query: 206 AGIHGCILADDMGLGKTLQSIALLYTLL-CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G G ILADDMGLGKTLQSI LLYTLL G DGK + K+ I+V P SLV NW+ E +K
Sbjct: 208 GG-EGAILADDMGLGKTLQSITLLYTLLKSLGRDGKRIAKRVIVVCPCSLVKNWQDEFEK 266
Query: 265 WV-------GGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS-C 316
WV R++ +AL ++TR V ID F P + VL+VSYETFRM +F+
Sbjct: 267 WVNCRAKTKAERIECMALADTTRKTVEGMIDQFLSPANYYDVLVVSYETFRMQVERFARK 326
Query: 317 SESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGI 357
+S DL+ICDEAHRLKN T++ NDL EFF+M NFTNPGI
Sbjct: 327 KDSADLIICDEAHRLKNQDAQTSQALASLACRRRVLLSGTPMQNDLVEFFSMANFTNPGI 386
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
G F ++YE I+ GREP A++ K+ G +R +LSA + FI+RR N L + HLPP
Sbjct: 387 FGTKEEFTKHYEGPILRGREPDASDAAKRKGQDRQRQLSALSDMFIIRRMNRLNAQHLPP 446
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K+ +VVCC+LTP Q ++Y H I ++ + A+ K + L YI L+K+CNHP L+
Sbjct: 447 KLTQVVCCRLTPTQEKMYRHVIRKRDEQAAVEGHVKDT--LGYIQRLQKICNHPALVAQP 504
Query: 478 IKSGNPGTTGFEDCIRFFPPE---MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR 534
+ G+ +R PE M GR GG W
Sbjct: 505 -EGGSAANAREAAELRSLMPEDDHMPRGR-----GGREGW-------------------- 538
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLL 594
C +L G TS KR++ + FNDP F FLL
Sbjct: 539 -------------------HSC--------KLGGNTSTKKRKQFNDDFNDPGSGYFAFLL 571
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
SSKAGGCGLNLIGG+RLV+FD DWNPA DKQAAAR WRDGQK + + YRF+STGT+EE++
Sbjct: 572 SSKAGGCGLNLIGGSRLVMFDLDWNPATDKQAAARCWRDGQKYQCYTYRFVSTGTLEERM 631
Query: 655 YQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNY 714
QRQ+SKEGLQ VI+ + Q N +T+DL+ LF F S++H+ + C C+
Sbjct: 632 LQRQLSKEGLQNVIEDK------AQVNHFATDDLKKLFLFRPKTASDLHDELQCKACKG- 684
Query: 715 DDGAESIGEGDETNSANKNDQSD 737
+ D + + KN SD
Sbjct: 685 ----RAAARKDTSKAGGKNALSD 703
>gi|402080120|gb|EJT75265.1| DNA repair protein rhp54 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 810
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/580 (46%), Positives = 354/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 209 VPVVIDPRLTKVLRPHQIEGVKFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 267
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 268 LLKQSPEAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 327
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+S + T P V+IVSYET R++ + ++ L++CDE HRLKN QT T
Sbjct: 328 QWAISSGRAVTRP-----VIIVSYETLRLNVEELKHTQ-IGLMLCDEGHRLKNGDSQTFT 381
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NP +LG FR+ +E +I+ GR+ AT
Sbjct: 382 ALNNLNVTRRVILSGTPIQNDLSEYFSLISFANPALLGTRLEFRKRFEIAILRGRDADAT 441
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+ G ER EL VN+FI+RRTN +LS +LP K VV C L P Q +LYN FI S
Sbjct: 442 ESERAKGDERLKELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNLFIRS 501
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++ + K S+ L I LKKLCNHP L+ + PG C +FP +
Sbjct: 502 PEIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLSEDLPG------CENWFPEDYVP 551
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S W SGKM VL R+L +R T+D+IVL+SNYT TLD+F +LCR R Y
Sbjct: 552 KDSRGRDRDIKPWY--SGKMQVLDRMLARIRADTNDKIVLISNYTSTLDIFEKLCRSRGY 609
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 610 GNLRLDGTMNVTKRQKLVDRFNDPEGTEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 669
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 670 ADQQALARVWRDGQKKDCFVYRFITTGSIEEKIFQRQSHKQSLSSCV----VDSAEDVER 725
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + L++LF + D RS+ H+ C RC+ DG + I
Sbjct: 726 HFSLDSLKELFQYRGDTRSDTHDTFKCKRCR--PDGKQYI 763
>gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1]
Length = 856
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/626 (44%), Positives = 377/626 (60%), Gaps = 65/626 (10%)
Query: 133 DLPRTVENNVIEENFTLPPGVD-PLV------LWQPEEPQNDGGNLVPITVDPLLVRFLR 185
D+P+ +E E TL +D PLV + ++ +D VP+ +DP L + LR
Sbjct: 212 DMPKAIEPTKAE---TLEEKLDAPLVHKSLAEILGIKKKTDDEHPRVPVVIDPRLAKILR 268
Query: 186 PHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFD-GKPMVK 244
PHQ EGV+FM++CV+GL++ +GCI+AD+MGLGKTLQ I+L++TLL Q D GK ++
Sbjct: 269 PHQVEGVKFMYQCVTGLIDEKA-NGCIMADEMGLGKTLQCISLMWTLLKQSPDAGKSTIQ 327
Query: 245 KAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRDDVVSGIDSFTDPC 294
KAI+V P SLV NW E+ KW+G G+ L R + S T P
Sbjct: 328 KAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKEELTRQLRQWANATGRSVTRP- 386
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------------- 339
V+IVSYET R++ + ++ LL CDE HRLKN + T
Sbjct: 387 ----VIIVSYETLRLNVEELKNTK-IGLLFCDEGHRLKNSDSNTFNALNSLNVSRRVILT 441
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+NDL E+F++ +F NP +LG FR+ YE I+ GR+ A+E ++K G E ++ L
Sbjct: 442 GTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEADRKKGDECTAAL 501
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
VN+F++RRTN +LS +LP K VV C L P Q +LYN+FI S ++ + K S
Sbjct: 502 LGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPEIQALL--RGKGS 559
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
+ L I LKKLCNHP L+ + PG+ E C +P + + +W
Sbjct: 560 QPLKAINILKKLCNHPDLL--NMSDDLPGS---EKC---YPDDYVPKEARGRDREVKSW- 610
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
SGKM VL R+L +RQ T+D+IVL+SNYT TLDLF +LCR R+Y LRLDGT +++KR
Sbjct: 611 -YSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKR 669
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
QKLV+ FNDP +EF+FLLSSKAGGCG+NLIG NRLVLFDPDWNPA D+QA ARVWRDGQ
Sbjct: 670 QKLVDRFNDPEGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQ 729
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
KK F+YRF++TGTIEEK++QRQ K+ L + DS+ S + LR+LF +
Sbjct: 730 KKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLDSLRELFQYR 785
Query: 696 DDVRSEIHENMHCTRCQNYDDGAESI 721
D +S+ HE C RC+ DG + I
Sbjct: 786 SDTKSDTHETFKCKRCK--PDGKQYI 809
>gi|346326947|gb|EGX96543.1| DNA repair and recombination protein RAD54 [Cordyceps militaris
CM01]
Length = 844
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/580 (46%), Positives = 361/580 (62%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L LRPHQ EGV+FM+ CV+GL++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 160 VPVVLDPKLAGVLRPHQVEGVKFMYRCVAGLIDEKA-NGCIMADEMGLGKTLQCITLLWT 218
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GKP ++KAI+V P SLV NW E+ KW+G G+ L R
Sbjct: 219 LLKQSPDAGKPTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKSSKEELTRQLR 278
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT---- 336
++ S T P V+IVSYET R++ + ++ LL CDE HRLKN +
Sbjct: 279 QWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLLFCDEGHRLKNGDSNTFN 332
Query: 337 -LTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
L N +NDL E+F++ +F NP +LG FR+ +E I+ GR+ A+
Sbjct: 333 ALNNLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLDFRKRFEIPILRGRDADAS 392
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E++K+ G +SEL A VN+F++RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 393 EKDKERGDACTSELLAIVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 452
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ EDC FP +
Sbjct: 453 PDIQALL--RGKGSQPLKAINMLKKLCNHPDLL--NLGEDLPGS---EDC---FPKDYVP 502
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R+ T+D+IVL+SNYT TLDLF +LCR R+Y
Sbjct: 503 KEARGRDREIKPWY--SGKMQVLDRMLARIRRDTNDKIVLISNYTSTLDLFEKLCRSRQY 560
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCG+NLIG NRL+LFDPDWNPA
Sbjct: 561 GSLRLDGTMNVNKRQKLVDRFNDPEGDEFVFLLSSKAGGCGINLIGANRLILFDPDWNPA 620
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 621 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVQR 676
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + + RS+ H+ C RC+ DG + I
Sbjct: 677 HFSLDGLRELFQYRSNTRSDTHDTFKCRRCR--PDGNQYI 714
>gi|340518611|gb|EGR48851.1| hypothetical protein TRIREDRAFT_121506 [Trichoderma reesei QM6a]
Length = 1109
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/571 (46%), Positives = 358/571 (62%), Gaps = 53/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP + + LRPHQ EGV+FM++CV+GL++ HGCI+AD+MGLGKTLQ I L++T
Sbjct: 508 VPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLVDEKA-HGCIMADEMGLGKTLQCITLMWT 566
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++KAI+V P SLV NW E+ KW+G G+ L R
Sbjct: 567 LLKQSPNAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEELKRQLR 626
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN------- 333
++ S T P V+IVSYET R++ + ++ LL CDE HRLKN
Sbjct: 627 QWAIASGRSITRP-----VIIVSYETLRLNVEELKHTK-IGLLFCDEGHRLKNADSNTFN 680
Query: 334 ---DQTLTNR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
D ++ R NDL E+FA+ +F NP +LG FR+ +E I+ GR+ AT
Sbjct: 681 ALNDLNVSRRVILTGTPIQNDLTEYFALTSFANPDLLGSRLEFRKRFEIPILRGRDADAT 740
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEE++ G E + EL + VN+F++RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 741 EEERRRGDECTGELLSVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQIDLYNYFITS 800
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ E C FP +
Sbjct: 801 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLSDDLPGS---EKC---FPDDYVP 850
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R+ T+D+IVL+SNYT TLDLF +LCR+R+Y
Sbjct: 851 KEARGRDRDIKPW--YSGKMQVLDRMLAKIREDTNDKIVLISNYTSTLDLFERLCRDRQY 908
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ +EF+FLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 909 GCLRLDGTMNVNKRQKLVDRFNDPNGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPA 968
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 969 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 1024
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LF + D S+ H+ C RC+
Sbjct: 1025 HFSLDSLRELFQYRPDTTSDTHDTFKCKRCK 1055
>gi|66811190|ref|XP_639303.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|60467929|gb|EAL65942.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 931
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 281/679 (41%), Positives = 394/679 (58%), Gaps = 98/679 (14%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P + LVL+ P + G N + VDP+L + LRPHQREGVQFMF+C+ G +
Sbjct: 251 PLAPNSLVLFTPVDIT--GENRIHCVVDPILSQKLRPHQREGVQFMFDCLLGFRGGFKGN 308
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCILADDMGLGK++Q+I +L+TLL QG G+ KKA+IV P +LV NW E+KKW+G
Sbjct: 309 GCILADDMGLGKSIQAITILWTLLKQGPKGESTAKKAVIVAPCTLVGNWGQELKKWLGDG 368
Query: 270 VQLIALCESTRDDVVSGIDSFTD-PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEA 328
V +A+ EST+ +G T+ VLI+SY+ R++ S L+ICDE
Sbjct: 369 VNTVAIGESTK----TGRAKLTELEFGKADVLIISYDQLRIYCEDICKITSIGLVICDEG 424
Query: 329 HRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
HRLKN + T + NDL EF+AMVNF NPG+L + A F+ Y+
Sbjct: 425 HRLKNAEIKTTKAVSMIPTARRVILSGTPIQNDLTEFYAMVNFVNPGVLKNVATFKNVYD 484
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
I+ R P A++EEK++G +RS ELS +QFILRRT + + +LPPK+ V+ CKLTP
Sbjct: 485 APIVASRNPDASDEEKEIGRQRSLELSRLTSQFILRRTAFVNTQYLPPKVEYVIFCKLTP 544
Query: 430 LQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE 489
LQ +Y H I K K + T + L IT LKKL N +L+Y K + GT+
Sbjct: 545 LQLSIYKHLI--KEAKDSAFASTTGA--LPLITTLKKLSNCAELVYTPDKETDVGTS--- 597
Query: 490 DCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSN 544
++ FP P++F + S K+ + RLL ++R ++ D+ V++SN
Sbjct: 598 -ILKLFPKEWNPKVFQP-------------QYSSKLLFVDRLLANIRNSKSGDKTVIISN 643
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTL++ A +C+ R Y Y +LDG+T+ +KRQ+LVN +NDP++ EFVFLLSSKAGG GLN
Sbjct: 644 YTQTLEVLATMCKTRGYAYFQLDGSTANAKRQQLVNLYNDPARPEFVFLLSSKAGGVGLN 703
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIGGN LVLFD DWNPAND Q+ ARVWR+GQKK V IYR +TGTIEEK++QRQ++K+ L
Sbjct: 704 LIGGNHLVLFDADWNPANDAQSMARVWREGQKKIVSIYRTFTTGTIEEKIFQRQLTKQAL 763
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEG 724
I + +D+S + ++DL+D+FT +D + H+ + C +C A ++G
Sbjct: 764 STSITEGDSDNSPS----FDSKDLKDIFTLREDTLCDTHDMLSC-KC------APTVG-- 810
Query: 725 DETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSM-SV 783
G + K K + +LN+W HHF+ M +
Sbjct: 811 --------------------------GKIPKHKRDTMSIS-----ELNSW-HHFHQMEKI 838
Query: 784 PDAILQASAGDEVTFVFTN 802
D + ++ D TFVF N
Sbjct: 839 KDQKVASACQDIATFVFVN 857
>gi|358371330|dbj|GAA87938.1| SNF2 family N-terminal domain protein [Aspergillus kawachii IFO
4308]
Length = 778
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 282/635 (44%), Positives = 375/635 (59%), Gaps = 69/635 (10%)
Query: 118 WGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEE-----PQNDGGNLV 172
+ SSRP T+ + ++ P + E + P +PLV + + +G V
Sbjct: 115 YNSSRPA-PTLVDDVNEPESKEEATADAEEQKPKLDEPLVHKSLADILGLKKKTEGRPKV 173
Query: 173 PITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTL 232
P+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD MGLGKTLQ I+L++TL
Sbjct: 174 PVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNA-NGCIMADGMGLGKTLQCISLMWTL 232
Query: 233 LCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRD 281
L Q + G ++K II P+SLV NW E+ KW+G G+ L +
Sbjct: 233 LKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQ 292
Query: 282 DVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT--- 338
++ S P VLI+SYET R++ S LL+CDE HRLKN ++LT
Sbjct: 293 WAIASGRSIVRP-----VLIISYETLRLYVDTLRDS-PIGLLLCDEGHRLKNKESLTWTA 346
Query: 339 ----------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATE 382
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ TE
Sbjct: 347 LNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAAGTE 406
Query: 383 EEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK 442
E+ K G ER +ELS+ VN+FI+RRTN +LS +LP K VV C ++ Q LY HFI S
Sbjct: 407 EDLKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSEFQLGLYKHFIQSP 466
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT--TGFEDCIRFFPPEMF 500
+K + K S+ L I LKKLCNHP L+ + + PG T ED + PPE
Sbjct: 467 EIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSNDLPGCEYTFPED---YVPPEA- 518
Query: 501 SGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 519 RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCR 569
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R Y LRLDGT ++ KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPD
Sbjct: 570 TRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPD 629
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 630 WNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAE 685
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S E LR+LF F + RS+ H+ C RC+
Sbjct: 686 DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR 720
>gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102]
Length = 819
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/571 (46%), Positives = 358/571 (62%), Gaps = 53/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G++ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 160 VPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKA-NGCIMADEMGLGKTLQCITLMWT 218
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP ++KAI+V P SLV NW E+ KW+G G+ L R
Sbjct: 219 LLKQSPEAGKPTIQKAIVVCPASLVKNWANELTKWLGANAITPFAIDGKASKEELTRQLR 278
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S T P V+IVSYET R++ + ++ LL CDE HRLKN + T
Sbjct: 279 QWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLLFCDEGHRLKNSDSNTFN 332
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++ +F NP +LG FR+ +E I+ GR+ A+
Sbjct: 333 ALNSLDVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLEFRKRFEIPILRGRDADAS 392
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E +++ G E ++EL VN+F++RRTN +LS +LP K VV C ++P Q+ LYN+FI S
Sbjct: 393 ESDRQRGDECTAELLGIVNKFLIRRTNDILSKYLPVKYEHVVFCSISPFQASLYNYFITS 452
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ E C FPPE ++
Sbjct: 453 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLSDDLPGS---ECC---FPPE-YT 501
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ D E SGKM VL R+L +RQ T+D+IVL+SNYT TLDLF +LCR R+Y
Sbjct: 502 PKEARGRDRD-VRPEYSGKMMVLDRMLARIRQDTNDKIVLISNYTSTLDLFERLCRSRQY 560
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 561 GCLRLDGTMNVNKRQKLVDRFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 620
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 621 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 676
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LF + + S+ H+ C RC+
Sbjct: 677 HFSLDSLRELFQYRPNTTSDTHDTFKCKRCK 707
>gi|452004580|gb|EMD97036.1| hypothetical protein COCHEDRAFT_118646 [Cochliobolus heterostrophus
C5]
Length = 785
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 271/581 (46%), Positives = 355/581 (61%), Gaps = 56/581 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ +G+++ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 177 VPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKA-NGCIMADEMGLGKTLQCITLMWT 235
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++K +I P+SLV NW E+ KW+G G+ L + R
Sbjct: 236 LLKQSPEAGKSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIR 295
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ + P VLIVSYET R++ +F L++CDE HRLKN +LT
Sbjct: 296 QWSIASGRAVVRP-----VLIVSYETLRLYVDEFG-QTPIGLMLCDEGHRLKNGDSLTFT 349
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NPG LG FR+ +E I+ GR+ T
Sbjct: 350 ALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFRKQFEIPILKGRDANGT 409
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + + G ER +EL VN+FI+RRTN +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 410 DADIQKGNERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKS 469
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+V+ + K S+ L I LKKLCNHP L+ + PG ED + PE F
Sbjct: 470 PDVQSLL--RGKGSQPLKVIGMLKKLCNHPDLL--NLPEDLPGC---EDKL----PEDFV 518
Query: 502 GRSGSWTGGDG-AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+ G D V SGKM VL R+L +R T+D+IVL+SNYTQTLD+FA LCR R
Sbjct: 519 QKDAR--GRDREVKVWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRG 576
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y RLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNP
Sbjct: 577 YGCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNP 636
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 637 AADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCV----VDSAEDVE 692
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D+ S+ H+ C RC+ +DG + I
Sbjct: 693 RHFSLDSLRELFQYRDNTTSDTHDTFKCKRCRK-EDGKQII 732
>gi|294949971|ref|XP_002786396.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983]
gi|239900688|gb|EER18192.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 296/731 (40%), Positives = 400/731 (54%), Gaps = 105/731 (14%)
Query: 58 DALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVP 117
D V ++V+ R ++P +L AV + PF+ P + ++ R A + +
Sbjct: 18 DGQVESSIVLIRAPIMPMLLVDGIEYAVLKAPFRCPLKR------EDVSGRTAAPEATIS 71
Query: 118 WGSSRPVLVTITNRLDLPRTV--------ENNVIEENFTLPPGVDPLVLWQPEEPQNDGG 169
G + + R LP T+ E +V E + + EEP DG
Sbjct: 72 AGKT----LGCRRRYGLPETILRYRPQSEERDVENEPTS-----------RVEEPVRDGC 116
Query: 170 NLV--------PITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
LV ++VDP L LR HQR+GVQF+F C+ GL++ GCILADDMGLGK
Sbjct: 117 QLVLWRGEDGYEVSVDPRLSAVLREHQRQGVQFVFNCLMGLIDDFEGEGCILADDMGLGK 176
Query: 222 TLQSIALLYTLLCQGF--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCEST 279
TLQS+ +++TLL + P +++A++V P +LV NWEAE KW+G V++ A+ ES
Sbjct: 177 TLQSVTIVWTLLTANIAKNRGPAIERALVVCPAALVKNWEAEFAKWLGESVKVCAVAESQ 236
Query: 280 RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLT 338
RD V+ F ++VLI SYETFR H + C LL+CDEAHRLKND+T T
Sbjct: 237 RDKVIGAFTGFRYN-RDMRVLIASYETFRNHCQLLADCP--IGLLVCDEAHRLKNDRTKT 293
Query: 339 N-------------------RNDLEEFFAMVNFTNPGILGDAAY--FRRYYETSIICGRE 377
+NDL+EFFAM+ NP + + FRR + T I GRE
Sbjct: 294 AVCINGLRTRKRLLLSGTPIQNDLDEFFAMITLANPCLAEEKGRNSFRRRFATPISKGRE 353
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNH 437
P A+ EEK L ER +ELS N+FILRRTNALL+ LPPK I V +L+ +Q LY
Sbjct: 354 PEASPEEKALADERLAELSDMSNKFILRRTNALLAKVLPPKQIVVAFVRLSDIQIRLYKA 413
Query: 438 FIHSKNVKRAISEETKQSKI----LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR 493
FI S V+ ++ + K+ L+ I +L KLCNHP LI K + GFE
Sbjct: 414 FISSDCVQTTVARSASRGKVGKNVLSLIQSLTKLCNHPSLIRRFDKRCD---KGFEAADS 470
Query: 494 FFPPEMFSGRSGSWTG---GDGAWVELSGKMHVLARLLGHLRQR---TDDRIVLVSNYTQ 547
F R+ G GD + S K ++ LL LR R + DR+V++SNYTQ
Sbjct: 471 VFAELDGITRAAKQAGNKRGDQVIISASAKFLLVYNLLRTLRTRDGRSCDRVVIISNYTQ 530
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
T+DL ++C+E+++P +RLDG+ + KR LV+ FNDP + FVFLLSSKAGGCGLNLIG
Sbjct: 531 TIDLLQRMCQEQQWPVIRLDGSIGVKKRHSLVSTFNDPKADAFVFLLSSKAGGCGLNLIG 590
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
GNRLV+FDPDWNPAND+QA AR+WRDGQ K +IYR LSTGTIEEK+YQRQM K+ L ++
Sbjct: 591 GNRLVMFDPDWNPANDRQAMARIWRDGQTKVCWIYRLLSTGTIEEKIYQRQMKKDSLSEL 650
Query: 668 IQQEQ---------------------------TDSSATQGNFLSTEDLRDLFTFHDDVRS 700
+ QE+ T+ + S LR+LF +D S
Sbjct: 651 VVQEEPHESRSRRSSSSSSSSSSSSPGLVSGTTEKKVAGSSMFSAAHLRNLFMLQEDTDS 710
Query: 701 EIHENMHCTRC 711
E + +HC RC
Sbjct: 711 ETVDALHC-RC 720
>gi|19115202|ref|NP_594290.1| DNA repair protein [Schizosaccharomyces pombe 972h-]
gi|3123262|sp|P41410.2|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog
1
gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe]
Length = 852
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/579 (46%), Positives = 352/579 (60%), Gaps = 54/579 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L R LRPHQ EGV+F+++CV+G ++ +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 252 VAVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCA-NGCIMADEMGLGKTLQCIALLWT 310
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG--GRVQLIALCESTRDDVVSGID 288
LL Q GKP ++KAII P+SLV NW E+ KW+G I +S++ +++ +
Sbjct: 311 LLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQ 370
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ + VLI SYET R + + +E +L+CDE HRLKN +LT
Sbjct: 371 QWASVHGRQVTRPVLIASYETLRSYVEHLNNAE-IGMLLCDEGHRLKNSDSLTFTALDKL 429
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG+LG FR+ YE I+ GR+ TE++K+
Sbjct: 430 NVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKE 489
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G + +EL+ VN+FI+RRTN +LS +LP K VV C L+ Q LY HFI S + +
Sbjct: 490 NGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINK 549
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM----FSG 502
+ Q L I LKK+CNHP L+ T E C FPP G
Sbjct: 550 ILRGTGSQP--LKAIGLLKKICNHPDLLN--------LTEDLEGCEALFPPGFIPRELRG 599
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
R + LSGKM VL R+L ++Q TDD+IVL+SNYT TLDLF QLCR R Y
Sbjct: 600 RDRNIDSS------LSGKMLVLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYK 653
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LRLDGT +++KRQ+LV+ FNDP K+ FVFLLSSKAGGCG+NLIG NRL+LFDPDWNPA
Sbjct: 654 ALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAA 713
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + E D
Sbjct: 714 DQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVE----RH 769
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S ++LR LF +D E HE C RC+ DG + I
Sbjct: 770 FSLDNLRQLFQLNDHTVCETHETYKCKRCR---DGKQFI 805
>gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe]
Length = 852
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/579 (46%), Positives = 352/579 (60%), Gaps = 54/579 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L R LRPHQ EGV+F+++CV+G ++ +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 252 VAVVIDPKLTRILRPHQIEGVKFLYKCVTGRIDRCA-NGCIMADEMGLGKTLQCIALLWT 310
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG--GRVQLIALCESTRDDVVSGID 288
LL Q GKP ++KAII P+SLV NW E+ KW+G I +S++ +++ +
Sbjct: 311 LLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQ 370
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ + VLI SYET R + + +E +L+CDE HRLKN +LT
Sbjct: 371 QWASVHGRQVTRPVLIASYETLRSYVEHLNNAE-IGMLLCDEGHRLKNSDSLTFTALDKL 429
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG+LG FR+ YE I+ GR+ TE++K+
Sbjct: 430 NVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKE 489
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G + +EL+ VN+FI+RRTN +LS +LP K VV C L+ Q LY HFI S + +
Sbjct: 490 NGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINK 549
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM----FSG 502
+ Q L I LKK+CNHP L+ T E C FPP G
Sbjct: 550 ILRGTGSQP--LKAIGLLKKICNHPDLLN--------LTEDLEGCEALFPPGFIPRELRG 599
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
R + LSGKM VL R+L ++Q TDD+IVL+SNYT TLDLF QLCR R Y
Sbjct: 600 RDRNIDSS------LSGKMLVLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYK 653
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LRLDGT +++KRQ+LV+ FNDP K+ FVFLLSSKAGGCG+NLIG NRL+LFDPDWNPA
Sbjct: 654 ALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAA 713
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + E D
Sbjct: 714 DQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVE----RH 769
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S ++LR LF +D E HE C RC+ DG + I
Sbjct: 770 FSLDNLRQLFQLNDHTVCETHETYKCKRCR---DGKQFI 805
>gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+]
gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina]
gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+]
Length = 800
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/580 (45%), Positives = 358/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM++CV+G+++ HGCI+AD+MGLGKTLQ I LL+T
Sbjct: 199 VPVVIDPKLAKILRPHQIEGVKFMYKCVTGMVDEKA-HGCIMADEMGLGKTLQCITLLWT 257
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++KAI+ P SLV NW E+ KW+G G+ L R
Sbjct: 258 LLKQSPDAGKTTIQKAIVACPASLVRNWANELVKWLGPDATTPFAIDGKASKEELTRQLR 317
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ----T 336
++ + T P ++IVSYET R++ + +E L++CDE HRLKN+ T
Sbjct: 318 QWAIATGRAVTRP-----IIIVSYETLRLNCEELRNTE-IGLILCDEGHRLKNNDNKLFT 371
Query: 337 LTN---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
N +NDL E+F++++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 372 ALNGLNVKRRVILSGTPIQNDLSEYFSLISFANPDLLGTHLEFRKRFEIPILRGRDSMAS 431
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E +EL+ VN+F++RRTN LLS +LP K VV C L P Q +LYN+F+ S
Sbjct: 432 EAERKRGDECLAELATIVNKFVIRRTNDLLSKYLPIKYEHVVFCNLAPFQLDLYNYFLTS 491
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LK LCNHP L+ + PG+ + +P +
Sbjct: 492 PDIQALL--RGKGSQPLKAIGILKNLCNHPDLL--KLPDDLPGSE------QHYPDDYVP 541
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S W SGKM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 542 RDSRGRDRDIKPWY--SGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFEKLCRSRAY 599
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
P LRLDG ++KRQKLV+ FNDP+ +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 600 PCLRLDGKMLVNKRQKLVDKFNDPNGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 659
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 660 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 715
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D +S+ H+ C RC+ DG + I
Sbjct: 716 HFSLDSLRELFQYRPDTKSDTHDTFKCKRCK--PDGKQFI 753
>gi|378732226|gb|EHY58685.1| DNA repair protein rhp54 [Exophiala dermatitidis NIH/UT8656]
Length = 805
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/575 (44%), Positives = 361/575 (62%), Gaps = 45/575 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ GCI+AD+MGLGKTLQ I L++T
Sbjct: 200 VPVVIDPRLAKVLRPHQVEGVRFLYRCTTGLVDEKA-KGCIMADEMGLGKTLQCITLMWT 258
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q + GKP + K II P SLV NW E+ KW+G G + A+ ++T++++ +
Sbjct: 259 LLKQSPEAGKPTIHKCIIACPASLVKNWANELVKWLGEGAIHPFAIDGKATKEELTMQLK 318
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ + VLIVSYE+ R++ + L++CDE HRLKN ++ T
Sbjct: 319 QWAMASGRSIARPVLIVSYESLRLNIEELR-DVKIGLMLCDEGHRLKNAESETYMALTGL 377
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E++++++F NPG LG A FR+ +E I+ GR+ T+ +K+
Sbjct: 378 NVDRRVILSGTPIQNDLTEYYSLLDFANPGYLGTKADFRKKFELPILRGRDAAGTDTDKQ 437
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G+E ++ L + VN+F++RRTN +LS +LP K VV C L P Q +LYNHFI S ++K
Sbjct: 438 KGVEANAGLGSLVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIQSPDIKS 497
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ K S+ L I LKKLCNHP L+ ++ PG+ +F+P + +
Sbjct: 498 LL--RGKGSQPLKAIGILKKLCNHPDLL--DLEKDLPGSE------KFWPDDYVPKEARG 547
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+W SGK VL R+L +RQ T+D+IVL+SNYTQTLD+F +LCR R Y LRL
Sbjct: 548 RDRDVRSWY--SGKFAVLERMLARIRQDTNDKIVLISNYTQTLDVFEKLCRSRNYGCLRL 605
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA D+QA
Sbjct: 606 DGTMNVNKRQKLVDRFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQA 665
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF+ TGTIEEK++QRQ K+ L + DS+ + +
Sbjct: 666 LARVWRDGQKKDCFVYRFMGTGTIEEKIFQRQSHKQALSSTV----VDSAEDVERHFTLD 721
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
LR+LF F + +S+ H+ C RC+ DG + I
Sbjct: 722 SLRELFQFKPETKSDTHDTFKCKRCR--PDGVQQI 754
>gi|358394253|gb|EHK43646.1| hypothetical protein TRIATDRAFT_319009 [Trichoderma atroviride IMI
206040]
Length = 802
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/580 (46%), Positives = 361/580 (62%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP + + LRPHQ EGV+FM++CV+GL++ GCI+AD+MGLGKTLQ I L++T
Sbjct: 201 VPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLVDEKA-QGCIMADEMGLGKTLQCITLMWT 259
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q GK ++KAI+V P SLV NW E+ KW+G G+ L R
Sbjct: 260 LLKQSPSAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEELKRQLR 319
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN------- 333
++ S T P V+IVSYET R++ + ++ LL CDE HRLKN
Sbjct: 320 QWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLLFCDEGHRLKNADSNTFN 373
Query: 334 ---DQTLTNR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
D ++ R NDL E+FA+ +F NP +LG FR+ +E I+ GR+ A+
Sbjct: 374 ALNDLKVSRRVILTGTPIQNDLTEYFALTSFANPDLLGSRLEFRKRFEIPILRGRDADAS 433
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E++++ G E +SEL VN+F++RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 434 EQDRRRGDECTSELLGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 493
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ E C FP +
Sbjct: 494 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLADDLPGS---EKC---FPGDYVP 543
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S W SGKM VL R+L +R+ T+D+IVL+SNYT TLDLF +LCR+R+Y
Sbjct: 544 KESRGRDRDIKPW--YSGKMQVLDRMLAKIREDTNDKIVLISNYTSTLDLFERLCRDRQY 601
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ +EF+FLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 602 GCLRLDGTMNVNKRQKLVDRFNDPNGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPA 661
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 662 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 717
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + D S+ H+ C RC++ DG + I
Sbjct: 718 HFSLDSLRELFQYRPDTTSDTHDTFKCKRCKS--DGRQFI 755
>gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
Length = 839
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/600 (46%), Positives = 364/600 (60%), Gaps = 57/600 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++A GCI+AD+MGLGKTLQ +AL++T
Sbjct: 235 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARA-KGCIMADEMGLGKTLQCLALMWT 293
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q GK ++K IIV P+SLV NW EI KW+G L L + S + +
Sbjct: 294 LLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLG-EGALTPLAVDGKSTKSSDLGTAL 352
Query: 292 DPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
S+ Q VLI+SYET R + K + +E L++ DE HRLKN +LT
Sbjct: 353 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTALNS 411
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+NDL E+F+++NF NPG LG FR+ YE +I+ GR+ TAT+EE+
Sbjct: 412 LRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNEFRKNYENAILRGRDSTATDEER 471
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
G ++ ELS V++FI+RRTN +LS +LP K V+ L+P+Q LYNHFI S +K
Sbjct: 472 AKGDKKLGELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKTLYNHFITSPEIK 531
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLI--YDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
+ I Q L I LKKLCNHP L+ D I+ G D I P + S
Sbjct: 532 KLIKGIGSQP--LKAIGMLKKLCNHPDLLDLPDDIE-------GSADLI---PDDYQSSI 579
Query: 504 SGSWTGGD---GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+G G + W SGK +L R L + + TDD+IVL+SNYTQTLDL ++CR ++
Sbjct: 580 AGGSAGRNREIQTW--FSGKFLILERFLRKINKETDDKIVLISNYTQTLDLIEKMCRYKK 637
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y LRLDGT +I+KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG NRLVL DPDWNP
Sbjct: 638 YGVLRLDGTMNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINLIGANRLVLIDPDWNP 697
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A+D+QA ARVWRDGQKK FIYR +STGTIEEK++QRQ K L + E+ D
Sbjct: 698 ASDQQALARVWRDGQKKDCFIYRLISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE---- 753
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG----AESIGEGDETNSANKNDQS 736
S+E+LR LF F D + H+ HC RC+ D G A ++ GD T + N Q+
Sbjct: 754 RLFSSENLRQLFKFQPDTECDTHDTFHCNRCKK-DKGQFIKAPAMLYGDATTWNHLNHQA 812
>gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger]
Length = 846
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/592 (46%), Positives = 358/592 (60%), Gaps = 65/592 (10%)
Query: 165 QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ 224
+ +G VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD MGLGKTLQ
Sbjct: 234 KTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNA-NGCIMADGMGLGKTLQ 292
Query: 225 SIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLI 273
I+L++TLL Q + G ++K II P+SLV NW E+ KW+G G+
Sbjct: 293 CISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKT 352
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN 333
L + ++ + P VLI+SYET R++ S LL+CDE HRLKN
Sbjct: 353 ELISQMKQWAIASGRAIVRP-----VLIISYETLRLYVDTLRDS-PIGLLLCDEGHRLKN 406
Query: 334 DQTLT-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
++LT +NDL E+FA+++F NP +LG FR+ +E I+
Sbjct: 407 KESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILR 466
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL 434
GR+ TEE+ K G ER +ELS VN+FI+RRTN +LS +LP K VV C ++ Q L
Sbjct: 467 GRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSAFQLGL 526
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT--TGFEDCI 492
Y HFI S +K + K S+ L I LKKLCNHP L+ + + PG T ED
Sbjct: 527 YKHFIQSPEIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSNDLPGCEYTFPED-- 580
Query: 493 RFFPPEMFSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTL 549
+ PPE GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTL
Sbjct: 581 -YVPPEA-RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTL 629
Query: 550 DLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGN 609
DLF +LCR R Y LRLDGT ++ KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG N
Sbjct: 630 DLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGAN 689
Query: 610 RLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ 669
RLVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L +
Sbjct: 690 RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV- 748
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
DS+ S E LR+LF F + RS+ H+ C RC+ DG + I
Sbjct: 749 ---VDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGTQYI 795
>gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
Length = 870
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/597 (45%), Positives = 362/597 (60%), Gaps = 61/597 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP+L + LRPHQ EGV+F++ C +GL+ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 274 VPVVIDPVLSKVLRPHQVEGVKFLYRCTTGLV-VEKAYGCIMADEMGLGKTLQCIALMWT 332
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q K ++K IIV P+SLV NW E+ KW+G G++ + E+TR
Sbjct: 333 LLKQSPIAHKSTIEKCIIVCPSSLVRNWANELIKWLGPAAPGNLALDGKLSKDEMIEATR 392
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
+ + + P V+IVSYET R + +E LL+CDE HRLKN +LT +
Sbjct: 393 RWCSASGRAISQP-----VMIVSYETLRNLQEELGNTE-VGLLLCDEGHRLKNADSLTFQ 446
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+FA++NF NP +LG FR+ +E +I+ GR+ AT
Sbjct: 447 ALTQIKVRRRVILSGTPIQNDLSEYFALLNFANPELLGSRTEFRKNFEIAILKGRDAEAT 506
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E++++ E+ S+LSA V++FI+RRTN LLS +LP K VV CK++ Q +LY FI S
Sbjct: 507 EKQQQEANEKLSQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMSAFQLDLYRLFIRS 566
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K+ + Q L I LKKLCNHP L+ E +FP E ++
Sbjct: 567 PEIKKLLRGTGSQP--LKAIGILKKLCNHPDLL--------DLPNDLEGSEEYFP-EAYT 615
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
R + ELSGKM VL R L +R ++D+IVL+SNYTQTLD+F ++CR R+
Sbjct: 616 PRDRRYVNP-----ELSGKMMVLQRFLETIRATSNDKIVLISNYTQTLDVFERMCRANRW 670
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
RLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 671 GMFRLDGTMTINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 730
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
+D+QA ARVWRDGQKK F+YRF++TG+IEEK+ QRQ K+ L + E D++
Sbjct: 731 SDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQDAA----R 786
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN----YDDGAESIGEGDETNSANKND 734
S EDLR LFTF ++ + H+ C RC+N GA G+ N KN+
Sbjct: 787 HFSGEDLRALFTFKEETACDTHDTYKCKRCKNGKQFIKAGALLYGDTSTWNHYGKNE 843
>gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88]
Length = 813
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/592 (46%), Positives = 358/592 (60%), Gaps = 65/592 (10%)
Query: 165 QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ 224
+ +G VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD MGLGKTLQ
Sbjct: 201 KTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNA-NGCIMADGMGLGKTLQ 259
Query: 225 SIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLI 273
I+L++TLL Q + G ++K II P+SLV NW E+ KW+G G+
Sbjct: 260 CISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKT 319
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN 333
L + ++ + P VLI+SYET R++ S LL+CDE HRLKN
Sbjct: 320 ELISQMKQWAIASGRAIVRP-----VLIISYETLRLYVDTLRDS-PIGLLLCDEGHRLKN 373
Query: 334 DQTLT-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
++LT +NDL E+FA+++F NP +LG FR+ +E I+
Sbjct: 374 KESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILR 433
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL 434
GR+ TEE+ K G ER +ELS VN+FI+RRTN +LS +LP K VV C ++ Q L
Sbjct: 434 GRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSAFQLGL 493
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT--TGFEDCI 492
Y HFI S +K + K S+ L I LKKLCNHP L+ + + PG T ED
Sbjct: 494 YKHFIQSPEIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSNDLPGCEYTFPED-- 547
Query: 493 RFFPPEMFSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTL 549
+ PPE GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTL
Sbjct: 548 -YVPPEA-RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTL 596
Query: 550 DLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGN 609
DLF +LCR R Y LRLDGT ++ KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG N
Sbjct: 597 DLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGAN 656
Query: 610 RLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ 669
RLVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L +
Sbjct: 657 RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV- 715
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
DS+ S E LR+LF F + RS+ H+ C RC+ DG + I
Sbjct: 716 ---VDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR--PDGTQYI 762
>gi|380493077|emb|CCF34140.1| DNA repair protein rhp54 [Colletotrichum higginsianum]
Length = 806
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 270/580 (46%), Positives = 355/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 205 VPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIEEKA-NGCIMADEMGLGKTLQCITLLWT 263
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 264 LLKQSPEAGKGTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 323
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ S T P V+IVSYET R++ + ++ L++CDE HRLKN QT +
Sbjct: 324 QWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLMLCDEGHRLKNGDSQTFS 377
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NP +LG FR+ +E I+ GR+ A
Sbjct: 378 ALNNLNVTRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLDFRKRFELPILRGRDADAA 437
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E SEL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 438 EAERKKGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 497
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++ + K S+ L I LKKLCNHP L+ I PG+ EDC +P +
Sbjct: 498 PEIQALL--RGKGSQPLKAINILKKLCNHPDLL--NIADDLPGS---EDC---YPDDYVP 547
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 548 KEARGRDRDVKPW--YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAY 605
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 606 GCLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 665
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 666 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 721
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + S+ H+ C RC+ DG + I
Sbjct: 722 HFSLDSLRELFQYRPGTNSDTHDTFKCKRCK--PDGRQYI 759
>gi|440478876|gb|ELQ59674.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae
P131]
Length = 843
Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/607 (44%), Positives = 368/607 (60%), Gaps = 60/607 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 242 VPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 300
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 301 LLKQSPEAGKPAIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 360
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+S + T P V+IVSYET R++ + ++ L++CDE HRLKN QT T
Sbjct: 361 QWAISSGRAVTRP-----VIIVSYETLRLNVEELKHTK-IGLMLCDEGHRLKNGDSQTFT 414
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 415 ALNNLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADAS 474
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E+E+ G E EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 475 EKERVKGDECLKELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 534
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ +P +
Sbjct: 535 PDIQALL--RGKGSQPLKAIGILKKLCNHPDLL--NLSDDLPGSEAH------WPSDYVP 584
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S W SGKM VL R+L +R T+D+IVL+SNYT TLDLF +LCR R Y
Sbjct: 585 KESRGRDREIKPW--YSGKMQVLDRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGY 642
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 643 GSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 702
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 703 ADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVER 758
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-----GDETNSANKNDQS 736
S + L++LF + + RS+ H+ C RC+ DG + I GD + + N++
Sbjct: 759 HFSLDSLKELFQYRGNTRSDTHDTFKCKRCK--PDGKQYIKAPAMLYGDTSTWNHFNNEG 816
Query: 737 DQEVTDI 743
+ + D+
Sbjct: 817 LKPIQDL 823
>gi|389637459|ref|XP_003716366.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea]
gi|351642185|gb|EHA50047.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
Length = 803
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/607 (44%), Positives = 368/607 (60%), Gaps = 60/607 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 202 VPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 260
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 261 LLKQSPEAGKPAIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 320
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+S + T P V+IVSYET R++ + ++ L++CDE HRLKN QT T
Sbjct: 321 QWAISSGRAVTRP-----VIIVSYETLRLNVEELKHTK-IGLMLCDEGHRLKNGDSQTFT 374
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 375 ALNNLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADAS 434
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E+E+ G E EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 435 EKERVKGDECLKELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 494
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ +P +
Sbjct: 495 PDIQALL--RGKGSQPLKAIGILKKLCNHPDLL--NLSDDLPGSEAH------WPSDYVP 544
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S W SGKM VL R+L +R T+D+IVL+SNYT TLDLF +LCR R Y
Sbjct: 545 KESRGRDREIKPWY--SGKMQVLDRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGY 602
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 603 GSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 662
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 663 ADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVER 718
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-----GDETNSANKNDQS 736
S + L++LF + + RS+ H+ C RC+ DG + I GD + + N++
Sbjct: 719 HFSLDSLKELFQYRGNTRSDTHDTFKCKRCK--PDGKQYIKAPAMLYGDTSTWNHFNNEG 776
Query: 737 DQEVTDI 743
+ + D+
Sbjct: 777 LKPIQDL 783
>gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 937
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/679 (40%), Positives = 390/679 (57%), Gaps = 97/679 (14%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P + LVL+QP + ++ N +P+ VDP+L LRPHQR+GVQFMF+C+ G +
Sbjct: 261 PHSPNALVLYQPRDMLSE--NNIPVVVDPILSAKLRPHQRQGVQFMFDCLLGFRGGYKGN 318
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCILADDMGLGK++Q+IA+L+TLL QG +G P ++A+IV P+SLV NW E+KKW+G
Sbjct: 319 GCILADDMGLGKSIQAIAILWTLLKQGPNGLPTAERAVIVAPSSLVGNWCKELKKWLGEG 378
Query: 270 VQLIALCESTRDDVVSGIDSFTD-PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEA 328
++ +A+ ST+ G + + VL++SY+ R++ + S L+ICDE
Sbjct: 379 IKPVAIGGSTK----YGRARLAELELGTKDVLVISYDQLRIYCEEIIKISSIGLVICDEG 434
Query: 329 HRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
HRLKN + T + NDL EFFAMVNF NPG+L + + F+ Y+
Sbjct: 435 HRLKNPEIKTTKAVSMIPTPRRVILSGTPIQNDLNEFFAMVNFVNPGVLKNMSTFQNVYD 494
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
I+ R P A++E+K+LG ERS+EL+ QFILRRT A+ +LP KI V KL+P
Sbjct: 495 APILASRNPDASDEDKRLGRERSAELTRLTQQFILRRTAAVNVQYLPKKIEYTVFIKLSP 554
Query: 430 LQSELYNHFIHS-KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
LQ ++Y H + + KN + S L IT LKKL N P+LIY + T
Sbjct: 555 LQHKIYKHLVDTIKN-----QQFGNFSGALPLITTLKKLTNCPELIY--LPDKEDPTQVN 607
Query: 489 EDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
+ ++ FP P++F + SGK+ + +LL +R+ + DR+V++SN
Sbjct: 608 DSVLKLFPKEWNPKVFQP-------------QYSGKLQFVDKLLAGIRKTSKDRVVIISN 654
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTL + A + R R Y + +LDG+TS+ RQK+V+ FNDPS+NEFVFLLSSKAGG GLN
Sbjct: 655 YTQTLTVLAGMMRTRGYEFFQLDGSTSVDNRQKMVDLFNDPSRNEFVFLLSSKAGGVGLN 714
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG N LVL+DPDWNPAND QA ARVWR+GQKK V IYR LSTGTIEEK++QRQ++K L
Sbjct: 715 LIGANHLVLYDPDWNPANDLQAMARVWREGQKKVVSIYRTLSTGTIEEKIFQRQITKMAL 774
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEG 724
+ + +D++ T+DL+D+F +D + H+ + +C G
Sbjct: 775 STSVVEGDSDNAPA----FETKDLKDIFNLREDTICDTHDMLGTCKC------------G 818
Query: 725 DETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMS-V 783
T K+ + + ++ + H+Y MS +
Sbjct: 819 APTTRIPKHKRDSMSIGELASY-----------------------------DHYYDMSKL 849
Query: 784 PDAILQASAGDEVTFVFTN 802
D LQ ++ D V+F+F N
Sbjct: 850 KDKNLQEASRDIVSFMFAN 868
>gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23]
Length = 807
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 267/582 (45%), Positives = 358/582 (61%), Gaps = 61/582 (10%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E+PQ VP+ +DP L + LRPHQ EGV+FM+ CV+G++ +GCI+AD+MGLGK
Sbjct: 202 EQPQ------VPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKA-NGCIMADEMGLGK 254
Query: 222 TLQSIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRV 270
TLQ I L++TLL Q + GKP ++KAI+V P SLV NW E+ KW+G G+
Sbjct: 255 TLQCITLMWTLLKQSPEAGKPTIQKAIVVCPASLVKNWANELTKWLGANAITPFAIDGKA 314
Query: 271 QLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHR 330
L R ++ S T P V+IVSYET R++ + ++ LL CDE HR
Sbjct: 315 SKEELTRQLRQWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLLFCDEGHR 368
Query: 331 LKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
LKN + T +NDL E+F++ +F NP +LG FR+ +E
Sbjct: 369 LKNSDSNTFNALNSLDVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLEFRKRFEIP 428
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I+ GR+ A+E +++ G ++EL VN+F++RRTN +LS +LP K VV C ++P Q
Sbjct: 429 ILRGRDADASESDRQRGDVCTAELLGIVNKFLIRRTNDILSKYLPVKYEHVVFCGVSPFQ 488
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
LYN+FI S +++ + K S+ L I LKKLCNHP L+ + PG+ E C
Sbjct: 489 ESLYNYFITSPDIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLSDDLPGS---ECC 541
Query: 492 IRFFPPEMFSGRSGSWTGGD-GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
FPPE + G D E SGKM VL R+L +RQ T+D+IVL+SNYT TLD
Sbjct: 542 ---FPPEYIPKEA---RGRDRDVRPEYSGKMMVLDRMLARIRQDTNDKIVLISNYTSTLD 595
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
LF +LCR R Y LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NR
Sbjct: 596 LFERLCRSREYGCLRLDGTMNVNKRQKLVDRFNDPNGEEFVFLLSSKAGGCGINLIGANR 655
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
LVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L +
Sbjct: 656 LVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV-- 713
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
DS+ S + LR+LF + + S+ H+ C RC+
Sbjct: 714 --VDSAEDVERHFSLDSLRELFQYRPNTTSDTHDTFKCKRCK 753
>gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 852
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 268/580 (46%), Positives = 355/580 (61%), Gaps = 55/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 251 VPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIEEKA-NGCIMADEMGLGKTLQCITLLWT 309
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 310 LLKQSPEAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 369
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S T P V+IVSYET R++ + ++ L++CDE HRLKN + T
Sbjct: 370 QWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLMLCDEGHRLKNGDSQTFN 423
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 424 ALNSLNVTRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFELPILRGRDADAS 483
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E ++K G E SEL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 484 EIDRKKGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 543
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++ + K S+ L I LKKLCNHP L+ I PG+ E+C +P +
Sbjct: 544 PEIQALL--RGKGSQPLKAINILKKLCNHPDLL--NIADDLPGS---ENC---YPDDYVP 593
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 594 KEARGRDRDIKPW--YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAY 651
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 652 GCLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 711
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 712 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 767
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + S+ H+ C RC+ DG + I
Sbjct: 768 HFSLDSLRELFQYRPGTNSDTHDTFKCKRCK--PDGRQYI 805
>gi|452981665|gb|EME81425.1| hypothetical protein MYCFIDRAFT_155601 [Pseudocercospora fijiensis
CIRAD86]
Length = 810
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/575 (45%), Positives = 355/575 (61%), Gaps = 46/575 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F+++C +GL+++ GCI+AD+MGLGKTLQ I L++T
Sbjct: 206 VPVVIDPRLAQKLRPHQVEGVKFLYKCTTGLIDSNA-EGCIMADEMGLGKTLQCITLMWT 264
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE--STRDDVVSGID 288
LL Q D GK ++K I+ P+SLV NW E+ KW+G C+ ++++++ +
Sbjct: 265 LLKQSPDAGKSTIQKCIVACPSSLVRNWANELVKWLGPDAITPFACDGKASKEELTQQMR 324
Query: 289 SF---TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
S+ T VLIVSYET R++ + + L++CDE HRLKN ++ T
Sbjct: 325 SWASATGRAVVRPVLIVSYETLRLYVDELR-NAPIGLMLCDEGHRLKNAESQTFEALTGL 383
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+FA+++F NPG LG FR+ YE I+ GR+ T+ +++
Sbjct: 384 NVKKRVILSGTPIQNDLSEYFALLDFANPGYLGTRQEFRKQYEIPILRGRDADGTDADRQ 443
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G ER EL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S ++
Sbjct: 444 KGDERLKELLILVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQS 503
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ K S+ L I LKKLCNHP L+ + PG C FP + +
Sbjct: 504 LL--RGKGSQPLKAIGLLKKLCNHPDLL--NLPDDLPG------CEEHFPADFVPKDARG 553
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
W SGKM VL R+L +RQ T+D+IVL+SNYTQTLD+F +LCR R Y LRL
Sbjct: 554 RDRDVKPWY--SGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDVFEKLCRNRSYGCLRL 611
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA D+QA
Sbjct: 612 DGTMNVNKRQKLVDKFNDPEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQA 671
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+ S +
Sbjct: 672 LARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLD 727
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
LR+LF + S+ H+ C RC+ DG + I
Sbjct: 728 SLRELFQYRPGTTSDTHDTFKCKRCK---DGRQYI 759
>gi|440467195|gb|ELQ36432.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae Y34]
Length = 869
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/607 (44%), Positives = 368/607 (60%), Gaps = 60/607 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 268 VPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 326
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 327 LLKQSPEAGKPAIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 386
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
+S + T P V+IVSYET R++ + ++ L++CDE HRLKN QT T
Sbjct: 387 QWAISSGRAVTRP-----VIIVSYETLRLNVEELKHTK-IGLMLCDEGHRLKNGDSQTFT 440
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 441 ALNNLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADAS 500
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E+E+ G E EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 501 EKERVKGDECLKELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 560
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ +P +
Sbjct: 561 PDIQALL--RGKGSQPLKAIGILKKLCNHPDLL--NLSDDLPGSEAH------WPSDYVP 610
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
S W SGKM VL R+L +R T+D+IVL+SNYT TLDLF +LCR R Y
Sbjct: 611 KESRGRDREIKPW--YSGKMQVLDRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGY 668
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 669 GSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 728
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 729 ADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAEDVER 784
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-----GDETNSANKNDQS 736
S + L++LF + + RS+ H+ C RC+ DG + I GD + + N++
Sbjct: 785 HFSLDSLKELFQYRGNTRSDTHDTFKCKRCK--PDGKQYIKAPAMLYGDTSTWNHFNNEG 842
Query: 737 DQEVTDI 743
+ + D+
Sbjct: 843 LKPIQDL 849
>gi|399218088|emb|CCF74975.1| unnamed protein product [Babesia microti strain RI]
Length = 833
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 286/673 (42%), Positives = 371/673 (55%), Gaps = 96/673 (14%)
Query: 153 VDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCI 212
VDPLVL+ P + L P+ VDP+L + LR HQREGVQF+F+C+SGL G GCI
Sbjct: 120 VDPLVLYTPSP---ESKILKPVVVDPMLSKHLRDHQREGVQFVFDCLSGLKKFDG-QGCI 175
Query: 213 LADDMG-------LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 265
LADDMG LGKTLQSI +++TLL QG GKP +K I+ P +LVSNWE+EI KW
Sbjct: 176 LADDMGQLQHNLGLGKTLQSITVMWTLLNQGITGKPAARKCAIICPATLVSNWESEIAKW 235
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
+ GR A+ +++R+ VVS F S +V+I SYETFR+H K D++IC
Sbjct: 236 LKGRCPCTAVSDNSREKVVSKFQGFKYDYKS-RVIISSYETFRLHVDKLE-GVPIDIIIC 293
Query: 326 DEAHR-------LKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILG 359
DEAHR LKND+ + + NDL EF+A+V+ NP LG
Sbjct: 294 DEAHRMYLFYIGLKNDKAQSTKCIINIPAKMRLLLSGTPIQNDLNEFYALVSICNPNALG 353
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
D YFR+ Y I+ GR + +E KL R ELS NQF+LRRTNALLS LPPKI
Sbjct: 354 DINYFRKTYANPIVNGRSSDISSKEYKLAELRLKELSDITNQFVLRRTNALLSKLLPPKI 413
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIK 479
V C +TP+Q +Y+ F +K + + + +LA I L LCNHP LI D K
Sbjct: 414 TMNVFCNMTPIQQTMYDLFTTTKILYKKTDSKIPNKGLLA-IKGLMALCNHPFLISDPSK 472
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
G G +++ +GRS + +LSGK+++L LL ++ TDD++
Sbjct: 473 LGIDGLNDMIQELKYAS----NGRSKN------IRYDLSGKLYLLYCLLHEIKWNTDDKV 522
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
V+VS YTQTL L +LCRE Y Y LDG+ KR LV FNDP + FVFLLSSKAG
Sbjct: 523 VIVSYYTQTLSLIKRLCRECNYTYTCLDGSVPPKKRHALVTKFNDPFSDIFVFLLSSKAG 582
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
G G+NLIG NRL++FDPDWNPA D QA AR+WRDGQ+K +IYR GTIEEK+ QRQ+
Sbjct: 583 GAGVNLIGANRLIMFDPDWNPAFDYQALARIWRDGQRKVSYIYRLFCNGTIEEKILQRQL 642
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAE 719
SK L ++ TD LS EDLRD+FT + S H+ + C C
Sbjct: 643 SKGSLSSML---VTDGQNEIVEGLSMEDLRDIFTLKTNTLSNTHDTIGCKNC-------- 691
Query: 720 SIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFY 779
T+ + K D + E+DLN W HH
Sbjct: 692 -------TDKSYKAQDVDFD----------------------------EKDLNTWAHHSD 716
Query: 780 SMSVPDAILQASA 792
++PD IL+ +A
Sbjct: 717 IETLPDEILRNAA 729
>gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa]
Length = 834
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/571 (46%), Positives = 353/571 (61%), Gaps = 54/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 213 VPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKA-NGCIMADEMGLGKTLQCITLLWT 271
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 272 LLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 331
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ S T P V+IVSYET R++ + + L++CDE HRLKN QT +
Sbjct: 332 QWAIASGRSVTRP-----VIIVSYETLRLNVDELKGT-PIGLMLCDEGHRLKNGDSQTFS 385
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++ NP +LG FR+ +E I+ GR A+
Sbjct: 386 ALNSLNVSRRVILSGTPIQNDLSEYFALITVANPDLLGTRLEFRKRFEIPILRGRHADAS 445
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E E+K G E EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+F+ S
Sbjct: 446 EAERKRGDECLVELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVAS 505
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + + PG C +++P +
Sbjct: 506 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--DLSADLPG------CEQYWPEDYVP 555
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLDLF +LCR R+Y
Sbjct: 556 KEARGRDRDVKPW--YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQY 613
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP +EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 614 GCLRLDGTMNVNKRQKLVDKFNDPEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 673
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + D + +
Sbjct: 674 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAED---VERH 730
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
F + D R+LFT+ +S+ H+ C RC+
Sbjct: 731 F--SLDSRELFTYRPGTKSDTHDTFKCKRCK 759
>gi|429851172|gb|ELA26385.1| DNA repair and recombination protein rad54 [Colletotrichum
gloeosporioides Nara gc5]
Length = 806
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/581 (46%), Positives = 357/581 (61%), Gaps = 57/581 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 205 VPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIEEKA-NGCIMADEMGLGKTLQCITLLWT 263
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 264 LLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 323
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ S T P V+IVSYET R++ + ++ L++CDE HRLKN QT +
Sbjct: 324 QWAIASGRSVTRP-----VIIVSYETLRLNVEELKHTK-IGLMLCDEGHRLKNGDSQTFS 377
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FR+ +E I+ GR+ A+
Sbjct: 378 ALNNLNVTRRVILSGTPIQNDLSEYFALISFANPDLLGSRLEFRKRFELPILRGRDADAS 437
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E ++K G E SEL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 438 EADRKKGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 497
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ E+C PE +
Sbjct: 498 PSIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLGDDLPGS---ENCY----PEDYV 546
Query: 502 GRSGSWTGGD-GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+ D W SGKM VL R+L +RQ T+D+IVL+SNYT TLDLF +LCR R
Sbjct: 547 PKEARGRDRDIKPW--YSGKMQVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRA 604
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNP
Sbjct: 605 YGCLRLDGTMNVNKRQKLVDKFNNPEGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNP 664
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 665 AADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVE 720
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + S+ H+ C RC+ DG + I
Sbjct: 721 RHFSLDSLRELFQYRPGTNSDTHDTFKCKRCK--PDGRQYI 759
>gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
Length = 821
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 277/621 (44%), Positives = 373/621 (60%), Gaps = 57/621 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++A GCI+AD+MGLGKTLQ IAL++T
Sbjct: 220 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARA-KGCIMADEMGLGKTLQCIALMWT 278
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGIDS 289
LL Q GK ++K IIV P+SLV NW EI KW+G G + +A+ +ST++ + G
Sbjct: 279 LLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKNSELGGALQ 338
Query: 290 FTDPCSSLQ----VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
VLI+SYET R + K + +E L++ DE HRLKN +LT
Sbjct: 339 QWSVARGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTALNSL 397
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG LG F++ +E I+ GR+ AT++E++
Sbjct: 398 RCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKKNFENKILKGRDAIATDKERE 457
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+G E+ +ELS V++FI+RRTN +LS +LP K V+ L+P+Q +LY HFI S +K+
Sbjct: 458 VGDEKLAELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKDLYRHFITSPEIKK 517
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ Q L I LKKLCNHP L+ FE +F P E + GS
Sbjct: 518 LLKGVGSQP--LKAIGMLKKLCNHPDLLNLP--------DDFEGSEKFIP-EDYCSSIGS 566
Query: 507 WTGGDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
GG V+ SGK +L R L +R +T+D+IVL+SNYTQTLDL ++CR ++Y L
Sbjct: 567 --GGRNREVQSWYSGKFMILERFLYQIRSQTNDKIVLISNYTQTLDLIERMCRHKKYGSL 624
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDGT SI+KRQKLV+ FNDP NEF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+
Sbjct: 625 RLDGTLSINKRQKLVDKFNDPEGNEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQ 684
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S
Sbjct: 685 QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE----RLFS 740
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG----AESIGEGDET-----NSANKNDQ 735
++LR LF + D + H+ +C RC DG A ++ GD T N AN
Sbjct: 741 ADNLRQLFMYQPDTNCDTHDTYNCKRCTK--DGQKQKAPAMLYGDATTWNHINHANLAGN 798
Query: 736 SDQEVTDIGGFAGLAGCLHKL 756
D V + GF + L +
Sbjct: 799 EDLLVANEAGFEDITFALQYI 819
>gi|398396748|ref|XP_003851832.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
gi|339471712|gb|EGP86808.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
Length = 809
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/571 (46%), Positives = 346/571 (60%), Gaps = 54/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ C +GL++A GCI+AD+MGLGKTLQ I L++T
Sbjct: 205 VPVVIDPRLAKVLRPHQVEGVKFMYRCTTGLIDANA-EGCIMADEMGLGKTLQCITLMWT 263
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++K +I P+SLV NW E+ KW+G G+ L + R
Sbjct: 264 LLKQSPDAGKSTIQKCVIACPSSLVRNWANELIKWLGPDAINPFAVDGKASKEELTQQMR 323
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
+ + T P VLIVSYET R++ + L++CDE HRLKN ++ T
Sbjct: 324 SWASATGRAVTRP-----VLIVSYETLRLYVDELRTP--IGLMLCDEGHRLKNGESQTFE 376
Query: 339 --NR---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NR NDL E+FA++ F NPG LG FR+ +E I+ GR+ + T
Sbjct: 377 ALNRLNVSKRVILSGTPIQNDLSEYFALLTFANPGYLGTRLEFRKKFEIPILRGRDASGT 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E +++ G ER EL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 437 EADQQKGNERLKELLELVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++ + K S+ L I LKKLCNHP L+ + PG C FP +
Sbjct: 497 PEIQSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLPDDLPG------CESHFPEDFVP 546
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYTQTLD+F +LCR R Y
Sbjct: 547 KDARGRDRDVKPW--YSGKMQVLDRMLARIRHDTNDKIVLISNYTQTLDVFEKLCRNRSY 604
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 605 GCLRLDGTMAVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 664
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 665 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 720
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR+LF + + S+ H+ C RC+
Sbjct: 721 HFSLDSLRELFQYRPNTTSDTHDTFKCKRCK 751
>gi|453084606|gb|EMF12650.1| DNA repair and recombination protein RAD54 [Mycosphaerella
populorum SO2202]
Length = 714
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/567 (45%), Positives = 353/567 (62%), Gaps = 43/567 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++A GCI+AD+MGLGKTLQ I L++T
Sbjct: 110 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDANA-EGCIMADEMGLGKTLQCITLMWT 168
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q D GK ++K II P SLV NW E+ KW+G G ++ A+ +++++ + +
Sbjct: 169 LLKQSPDAGKSTIQKCIIACPASLVRNWANELVKWLGEGAIEPFAVDGKASKEQMTQQMR 228
Query: 289 SFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
++ VLI+SYET R++ + + L++CDE HRLKN ++ T
Sbjct: 229 AWASASGRAVVRPVLIISYETLRLYVDELR-NTPIGLMLCDEGHRLKNSESQTYMALAGL 287
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG LG A FR+ +E I+ GR+ TE +++
Sbjct: 288 NVKKRVILSGTPIQNDLSEYFSLLNFANPGYLGTQADFRKQFENPILRGRDADGTEADRQ 347
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G ER EL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S ++
Sbjct: 348 KGDERLKELLTLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQS 407
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ K S+ L I LKKLCNHP L+ + PG+ E + P+ GR
Sbjct: 408 LL--RGKGSQPLKAIGLLKKLCNHPDLL--NLPDDLPGSE--EHFPEEYVPKDQRGRDRE 461
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGKM VL R+L +R ++D+IVL+SNYTQTLD+F +LCR R Y LRL
Sbjct: 462 VNP------VYSGKMQVLDRMLARIRMDSNDKIVLISNYTQTLDVFEKLCRSRSYGCLRL 515
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCGLNLIG NRL+LFDPDWNPA D+QA
Sbjct: 516 DGTMNVNKRQKLVDKFNDPNGAEFVFLLSSKAGGCGLNLIGANRLILFDPDWNPAADQQA 575
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF++ GTIEEK++QRQ K+ L + DS+ STE
Sbjct: 576 LARVWRDGQKKDCFVYRFMAAGTIEEKIFQRQSHKQALSSCV----VDSAEDVERHFSTE 631
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQN 713
LR+LF + S+ H+ C RC+N
Sbjct: 632 SLRELFQYRPGTTSDTHDTFKCKRCKN 658
>gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
Length = 857
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 297/726 (40%), Positives = 407/726 (56%), Gaps = 88/726 (12%)
Query: 48 SDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSN----GYDNGND 103
SD D+ N D L N R V E V RK F P N GY+
Sbjct: 121 SDADKPYTNADRLALANRDANRYP----VFQAKEKGVVFRKAFAVPLINKNVGGYNPNRP 176
Query: 104 QLARRLCARKRFV------PWGSSRPVLV--TITNRLDLPR----------TVENNVIEE 145
L FV P G VL T+ ++ +P T++ ++ +
Sbjct: 177 PPTLGLRTGATFVAKALHDPSGEFAIVLYDPTVDDKPKVPEKPKDEPEPTTTIDAPLMHK 236
Query: 146 NFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
+ G+ V + E P+ VP+ +DP L + LRPHQ EGV+FM++CV+G+++
Sbjct: 237 SLAEILGIKKKV--EGEHPK------VPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDE 288
Query: 206 AGIHGCILADDMGLGKTLQSIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKK 264
+GCI+AD+MGLGKTLQ IALL+TLL Q + GK ++KAI+V P+SLV NW E+ K
Sbjct: 289 RA-NGCIMADEMGLGKTLQCIALLWTLLKQSPEAGKSAIQKAIVVCPSSLVKNWANELVK 347
Query: 265 WVG----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKF 314
W+G G+ L R ++ + T P V+IVSYET R++ +
Sbjct: 348 WLGADAVTPFAIDGKASKEELTRQLRQWAIASGRAVTRP-----VIIVSYETLRLNVDEL 402
Query: 315 SCSESCDLLICDEAHRLKN--DQTLTN-----------------RNDLEEFFAMVNFTNP 355
++ L++CDE HRLKN QT ++ +NDL E+F++++F NP
Sbjct: 403 KHTK-IGLMLCDEGHRLKNGDSQTFSSLNSLNVSRRIILSGTPIQNDLSEYFSLISFANP 461
Query: 356 GILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHL 415
+LG FR+ +E I+ GR+ A E ++K G E SEL VN+FI+RRTN +LS +L
Sbjct: 462 DLLGTRLEFRKRFELPILRGRDADADEVDRKKGDECLSELLGIVNKFIIRRTNDILSKYL 521
Query: 416 PPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY 475
P K VV C L P Q +LYN+F+ S +++ + K S+ L I LKKLCNHP L+
Sbjct: 522 PVKYEHVVFCNLAPFQLDLYNYFLTSPDIQALL--RGKGSQPLKAINILKKLCNHPDLL- 578
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
+ N G E+C P+ + + SGKM VL R+L +RQ T
Sbjct: 579 ----NLNDDLPGSENCW----PDDYVPKDARGHRNREVKPWYSGKMQVLDRMLARIRQDT 630
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLS 595
+D+IVL+SNYTQTLD+F +LCR R Y LRLDGT +++KRQKLV+ FNDP+ EFVFLLS
Sbjct: 631 NDKIVLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPAGEEFVFLLS 690
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCG+NLIG NRLVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++
Sbjct: 691 SKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIF 750
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD 715
QRQ K+ L + DS+ S + LR+LF + S+ H+ C RC+
Sbjct: 751 QRQSHKQSLSSCV----VDSAEDVERHFSLDGLRELFQYRPGTTSDTHDTFKCKRCK--P 804
Query: 716 DGAESI 721
DG + I
Sbjct: 805 DGRQHI 810
>gi|392595792|gb|EIW85115.1| DNA repair protein, SNF2 family [Coniophora puteana RWD-64-598 SS2]
Length = 811
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/576 (45%), Positives = 349/576 (60%), Gaps = 59/576 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP+L + LRPHQ EGV+F+++C +G++ +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 209 VPVVIDPILSKVLRPHQVEGVKFLYKCTTGMV-VENQYGCIMADEMGLGKTLQCIALLWT 267
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
L+ Q GKP ++K II P+SLV NW E+ KW+G G+ L E
Sbjct: 268 LVKQSPRPGKPTIEKCIIACPSSLVKNWANELSKWLGKDTISALAVDGKGGKGELLEKVA 327
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
V + + T P V+IVSYET R ++ + S S LL+CDE HRLKN ++LT +
Sbjct: 328 RWVAASGRNVTQP-----VMIVSYETLRTLTAHLA-SCSIGLLLCDEGHRLKNSESLTFQ 381
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+F+++NF NP LG FR+ +E +II GR+ A+
Sbjct: 382 ALNSLDVRRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKVDFRKNFENAIIRGRDANAS 441
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + ++ EL V +FI+RRTN LLS +LP K VV C L+ Q LY FI S
Sbjct: 442 DAFQAECEKKLKELGNLVTKFIIRRTNDLLSKYLPVKYEHVVFCGLSEFQLSLYRLFISS 501
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR---FFPPE 498
+K + +S+ L I LKKLCNHP+L+ D +R P+
Sbjct: 502 PEIKALL--RGTESQPLKAINMLKKLCNHPQLL------------NLPDDLRGSDHLIPD 547
Query: 499 MFSGRSGSWTGG-DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
FSG + S G + GK VL R L +R T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 548 DFSGSNSSGRGKTQNLRCDWGGKFIVLERFLHQMRTTTNDKIVLISNYTQTLDLFEKLCR 607
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
++Y Y RLDGT SI+KRQKLV+ FN+P EF+FLLSSKAGGCG+NLIG NRL+LFDPD
Sbjct: 608 SKKYGYFRLDGTMSITKRQKLVDQFNNPEGKEFIFLLSSKAGGCGINLIGANRLILFDPD 667
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ SK+ L + E+ D+
Sbjct: 668 WNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAVVDEKEDAE- 726
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S E LR LF F ++ SE HE C RC++
Sbjct: 727 ---RHFSLEALRQLFLFKENTLSETHETFKCKRCKD 759
>gi|350630130|gb|EHA18503.1| hypothetical protein ASPNIDRAFT_128714 [Aspergillus niger ATCC
1015]
Length = 1740
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/583 (46%), Positives = 352/583 (60%), Gaps = 65/583 (11%)
Query: 165 QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ 224
+ +G VP+ +DP L + LRPHQ EG F++ C +G+++ +GCI+AD MGLGKTLQ
Sbjct: 176 KTEGRPKVPVVIDPRLAKVLRPHQVEG--FLYRCTTGMVDKNA-NGCIMADGMGLGKTLQ 232
Query: 225 SIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLI 273
I+L++TLL Q + G ++K II P+SLV NW E+ KW+G G+
Sbjct: 233 CISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKT 292
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN 333
L + ++ + P VLI+SYET R++ S LL+CDE HRLKN
Sbjct: 293 ELISQMKQWAIASGRAIVRP-----VLIISYETLRLYVDTLRDS-PIGLLLCDEGHRLKN 346
Query: 334 DQTLT-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
++LT +NDL E+FA+++F NP +LG FR+ +E I+
Sbjct: 347 KESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILR 406
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL 434
GR+ TEE+ K G ER +ELS VN+FI+RRTN +LS +LP K VV C ++ Q L
Sbjct: 407 GRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSAFQLGL 466
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT--TGFEDCI 492
Y HFI S +K + K S+ L I LKKLCNHP L+ + + PG T ED
Sbjct: 467 YKHFIQSPEIKSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSNDLPGCEYTFPED-- 520
Query: 493 RFFPPEMFSGRS---GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTL 549
+ PPE GR SW SGKM VL R+L +RQ T+D+IVL+SNYTQTL
Sbjct: 521 -YVPPEA-RGRDRDIKSW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTL 569
Query: 550 DLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGN 609
DLF +LCR R Y LRLDGT ++ KRQKLV+ FN+P EFVFLLSSKAGGCGLNLIG N
Sbjct: 570 DLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGAN 629
Query: 610 RLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ 669
RLVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L +
Sbjct: 630 RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV- 688
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
DS+ S E LR+LF F + RS+ H+ C RC+
Sbjct: 689 ---VDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCR 728
>gi|452840044|gb|EME41982.1| hypothetical protein DOTSEDRAFT_81015 [Dothistroma septosporum
NZE10]
Length = 815
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/571 (46%), Positives = 354/571 (61%), Gaps = 51/571 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F+++C +GL+ G GCI+AD+MGLGKTLQ I L++T
Sbjct: 211 VPVVIDPKLAKVLRPHQVEGVKFLYKCTTGLIEE-GAEGCIMADEMGLGKTLQCITLMWT 269
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q D GK ++K +I P SLV NW E+ KW+G G + A+ +++++++ +
Sbjct: 270 LLKQSPDAGKSTIQKCVIACPASLVRNWANELVKWLGEGAIIPFAVDGKASKEELTQQMR 329
Query: 289 ---SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
S T VLIVSYET R++ + + L++CDE HRLKN ++ T
Sbjct: 330 QWASATGRAVIRPVLIVSYETLRLYVDELR-NTPIGLMLCDEGHRLKNAESNTYESLTAL 388
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+FA+++F N G LG FR+ YE I+ R+ ++++++
Sbjct: 389 NVKKRVILSGTPIQNDLSEYFALLDFANSGYLGTRLDFRKQYELPILRSRDADGSDKDRE 448
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G ER EL KVN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S ++
Sbjct: 449 KGEERLKELLGKVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQS 508
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP----PEMFSG 502
+ K S+ L I LKKLCNHP L+ + PG C + FP P+ G
Sbjct: 509 LL--RGKGSQPLKAIGLLKKLCNHPDLL--NLPDDLPG------CEKHFPDDYVPKDLRG 558
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
R SGKM VLAR+L +RQ T+D+IVL+SNYTQTLD+F +LCR Y
Sbjct: 559 RDRD------VKPYYSGKMQVLARMLARIRQDTNDKIVLISNYTQTLDVFEKLCRNNNYG 612
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LRLDGT +++KRQKLV FNDP+ EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 613 SLRLDGTMNVNKRQKLVEKFNDPNGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAA 672
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 673 DQQALARVWRDGQKKDCFVYRFMTTGTIEEKVFQRQSHKQALSSCV----VDSAEDVERH 728
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S + LR+LF + + S+ H+ C RC++
Sbjct: 729 FSVDSLRELFQYKPNTTSDTHDTFKCKRCKD 759
>gi|391342370|ref|XP_003745493.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Metaseiulus occidentalis]
Length = 679
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/584 (45%), Positives = 355/584 (60%), Gaps = 72/584 (12%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
+ LVL+ P+ Q +V + VDP L R LRPHQREGV+FM++C++G G +GCI+
Sbjct: 86 NALVLFSPKPGQPK--EIVHVVVDPNLTRVLRPHQREGVKFMYDCLTGA-QIEGSYGCIM 142
Query: 214 ADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQL 272
AD+MGLGKTLQ+I ++++L+ QG GKP V KA+IVTP+SLV NW E+KKW+G R +
Sbjct: 143 ADEMGLGKTLQTITVIWSLVRQGPTYGKPTVSKALIVTPSSLVKNWANELKKWLGDRARY 202
Query: 273 IAL---CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ L + DD ++G ++ C + +LI+SYET R+H + S S L++CDE H
Sbjct: 203 VTLEGGSGKSVDDDIAGF--LSNRC--VPILILSYETLRLHIAALRDSSSVGLIVCDEGH 258
Query: 330 RLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN T R NDL E+F++V+F N GILG A FR+ +E
Sbjct: 259 RLKNSDNQTYRSLNELKTPRRLLLSGTPIQNDLLEYFSLVHFVNNGILGTGAEFRKKFEN 318
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ RE +T +++ G E+ EL VN+ ++RRTNALLS +LP K VVCC LT
Sbjct: 319 PILRSREADSTADQRSKGQEKLDELVGIVNRCLIRRTNALLSQYLPIKHELVVCCNLTDA 378
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q + Y F + S + K LA IT LKK+CNHP L ++ +
Sbjct: 379 QKKAYKDF--------SKSYDQKDCTALAAITTLKKICNHPSLAEESRAASE-------- 422
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
+F P + SGK H+L LL ++ ++D++VLVSNYTQT++
Sbjct: 423 --KFDPSQ-------------------SGKFHILDGLLAAIKATSNDKVVLVSNYTQTME 461
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
LF QLCR R Y Y RLDGT S KR KLV FND + +E VFLLSSKAGGCGLN+IG NR
Sbjct: 462 LFEQLCRMRGYGYFRLDGTMSSKKRDKLVTQFNDVNSSEMVFLLSSKAGGCGLNIIGANR 521
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
LV+FDPDWNPA+D+QA ARVWRDGQ+K ++YR +STG+IEEK++QRQ K L V+
Sbjct: 522 LVMFDPDWNPASDQQAMARVWRDGQRKPCYVYRLISTGSIEEKIFQRQTHKTILSSVV-- 579
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHD-DVRSEIHENMHCTRCQN 713
DSSA ST DLRDLF + ++ S H + C+RC N
Sbjct: 580 --VDSSAQAERHFSTADLRDLFRLDEHELHSSTHSQIKCSRCVN 621
>gi|346976842|gb|EGY20294.1| DNA repair and recombination protein RAD54 [Verticillium dahliae
VdLs.17]
Length = 822
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/580 (45%), Positives = 359/580 (61%), Gaps = 54/580 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM++CV+G+++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 258 VPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDERA-NGCIMADEMGLGKTLQCITLLWT 316
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GK ++KAI+V P+SLV NW E+ KW+G G+ L R
Sbjct: 317 LLKQSPEAGKSAIQKAIVVCPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQLR 376
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ + T P V+IVSYET R++ + ++ L++CDE HRLKN QT +
Sbjct: 377 QWAIASGRAVTRP-----VIIVSYETLRLNVDELKHTK-IGLMLCDEGHRLKNGDSQTFS 430
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+ +NDL E+F++++F NP +LG FR+ +E I+ GR+ A
Sbjct: 431 SLNSLNVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADAD 490
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E ++K G E SEL VN+FI+RRTN +LS +LP K VV C L P Q +LYN+F+ S
Sbjct: 491 ETDRKKGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFLTS 550
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + N G E+C P+ +
Sbjct: 551 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL-----NLNDDLPGSENCW----PDDYV 599
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ SGKM VL R+L +RQ T+D+IVL+SNYTQTLD+F +LCR R Y
Sbjct: 600 PKDARGHRNREVKPWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDIFERLCRSRAY 659
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA
Sbjct: 660 GCLRLDGTMNVNKRQKLVDKFNDPTGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPA 719
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + DS+
Sbjct: 720 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVER 775
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF + S+ H+ C RC+ DG + I
Sbjct: 776 HFSLDGLRELFQYRPGTTSDTHDTFKCKRCK--PDGRQHI 813
>gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum]
Length = 812
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/573 (46%), Positives = 348/573 (60%), Gaps = 61/573 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EG++FM+ CV+G+ +AA GCI+AD+MGLGKTLQ IAL++T
Sbjct: 211 VPVVIDPRLSKVLRPHQVEGIKFMYRCVTGMTDAAA-SGCIMADEMGLGKTLQCIALMWT 269
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP ++K ++V P+SLV NW +E+ KW+G G+V L +
Sbjct: 270 LLKQSPEPGKPTIQKCVVVCPSSLVGNWASELVKWLGKDAINPFAIDGKVSKAELKAQLK 329
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
+S S P VLIVSYE+ R+H+S + S LL+ DE HRLKN T +
Sbjct: 330 QWAISSGRSVVRP-----VLIVSYESLRLHTSDLA-SIPIGLLLADEGHRLKNRDNQTYK 383
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+FA++NF NP LG FR+ YE I+ GR+ +
Sbjct: 384 ALMTLNVDRRVILSGTPIQNDLSEYFALLNFANPNFLGTHNEFRKQYELPILRGRDADGS 443
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E+++K G ER +EL VN+FI+RRTN +LS +LP K VV CKL+P Q++LYN+FI S
Sbjct: 444 EDDRKKGDERLAELLQLVNKFIIRRTNDILSKYLPVKYEHVVFCKLSPFQTDLYNYFITS 503
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP----P 497
++K + K S+ L I LKKLCNHP L+ + PG C +P P
Sbjct: 504 PDIKSIL--RGKGSQPLKAIGLLKKLCNHPDLL--NLSEDLPG------CESLYPDDYVP 553
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
+ GR V SGKM VL R+L +++ T D+IVL+SNYTQTLD+F +LCR
Sbjct: 554 KDARGRDRE------VKVWYSGKMMVLDRMLARIQRETKDKIVLISNYTQTLDVFEKLCR 607
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R Y LRLDGT + SKR KLV FNDP EFVFLLSSKAGGCG+NLIG NRLVLFDPD
Sbjct: 608 SRGYGALRLDGTMNGSKRTKLVAKFNDPDSEEFVFLLSSKAGGCGINLIGANRLVLFDPD 667
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + D
Sbjct: 668 WNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSTSV----VDGVE 723
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
+ L+ LF F + S+ H+ C R
Sbjct: 724 DVERHFGLDGLKQLFRFQPNTNSDTHDTFKCKR 756
>gi|443894835|dbj|GAC72182.1| DNA repair protein [Pseudozyma antarctica T-34]
Length = 865
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/580 (45%), Positives = 355/580 (61%), Gaps = 60/580 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
+P+ +DP+L + LRPHQ EGV+F++ C +GL+ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 269 IPVVIDPILSKVLRPHQVEGVKFLYRCTTGLV-VENAYGCIMADEMGLGKTLQCIALMWT 327
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q K + K IIV P+SLV NW E+ KW+G G++ + E+TR
Sbjct: 328 LLKQSPIAKKSTIDKCIIVCPSSLVRNWANELTKWLGAKAPGTLALDGKLSKDEMIEATR 387
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
+ + T P V+IVSYET R + +E LL+CDE HRLKN +LT +
Sbjct: 388 RWCNASGRAITQP-----VMIVSYETLRNLQEELGNTE-VGLLLCDEGHRLKNADSLTFQ 441
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+FA++NF NP +LG FR+ +E +I+ GR+ AT
Sbjct: 442 ALTQIKVRRRVILSGTPIQNDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEAT 501
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E++++ E+ S+LSA V++FI+RRTN LLS +LP K VV CK+ P Q +LY FI S
Sbjct: 502 EKQQQEANEKLSQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLFIRS 561
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K+ + Q L I LKKLCNH + G E ++FP E ++
Sbjct: 562 PEIKKLLRGTGSQP--LKAIGILKKLCNH-----PDLLDLPNDLDGSE---QYFP-EGYT 610
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
R + ELSGKM VL R L +R T+D+IVL+SNYTQTLD+F ++CR R+
Sbjct: 611 PRDRRYVNP-----ELSGKMMVLQRFLETIRATTNDKIVLISNYTQTLDVFERMCRANRW 665
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
RLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 666 GMFRLDGTMTINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 725
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
+D+QA ARVWRDGQKK F+YRF++TG+IEEK+ QRQ K+ L + E D++
Sbjct: 726 SDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQDAA----R 781
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S EDLR LF F + + H+ C RC++ G +SI
Sbjct: 782 HFSGEDLRALFAFKEQTVCDTHDTYKCKRCKS---GKQSI 818
>gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1]
Length = 848
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 370/604 (61%), Gaps = 51/604 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++A GCI+AD+MGLGKTLQ + L++T
Sbjct: 244 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARA-KGCIMADEMGLGKTLQCLTLMWT 302
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGIDS 289
LL Q GK ++K IIV P+SLV NW EI KW+G G + +A+ +ST++ S + +
Sbjct: 303 LLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKN---SELGT 359
Query: 290 FTDPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
S+ Q VLI+SYET R + K + +E L++ DE HRLKN +LT
Sbjct: 360 ALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTAL 418
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL E+F+++NF NPG LG F++ YE +I+ GR+ TA++E
Sbjct: 419 NSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDE 478
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E++ G ++ +ELS V++FI+RRTN +LS +LP K V+ L+P+Q ++YNHFI S
Sbjct: 479 EREKGDKKLNELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHFITSPE 538
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
+K+ + Q L I LKKLCNHP L+ G E+ I +G
Sbjct: 539 IKKLMKGTGSQP--LKAIGMLKKLCNHPDLL-----DLPEDVEGSEEFIPDDYQSSIAGG 591
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
S S W SGK +L R L + + TDD+IVL+SNYTQTLDL ++CR ++Y
Sbjct: 592 SASRNREIQTW--FSGKFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGV 649
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
LRLDGT +I+KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG NRLVL DPDWNPA+D
Sbjct: 650 LRLDGTMNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINLIGANRLVLMDPDWNPASD 709
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
+QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D
Sbjct: 710 QQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE----RLF 765
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG----AESIGEGDETNSANKNDQSDQE 739
S +LR LF F D + + H+ +C RC+ D G A ++ GD T + N Q+
Sbjct: 766 SVANLRQLFKFQPDTQCDTHDTFNCNRCKG-DKGQFIKAPAMLYGDATTWNHLNHQALAN 824
Query: 740 VTDI 743
DI
Sbjct: 825 NEDI 828
>gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
Length = 848
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 370/604 (61%), Gaps = 51/604 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++A GCI+AD+MGLGKTLQ + L++T
Sbjct: 244 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARA-KGCIMADEMGLGKTLQCLTLMWT 302
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGIDS 289
LL Q GK ++K IIV P+SLV NW EI KW+G G + +A+ +ST++ S + +
Sbjct: 303 LLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKN---SELGT 359
Query: 290 FTDPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
S+ Q VLI+SYET R + K + +E L++ DE HRLKN +LT
Sbjct: 360 ALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTAL 418
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL E+F+++NF NPG LG F++ YE +I+ GR+ TA++E
Sbjct: 419 NSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDE 478
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E++ G ++ +ELS V++FI+RRTN +LS +LP K V+ L+P+Q ++YNHFI S
Sbjct: 479 EREKGDKKLNELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHFITSPE 538
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
+K+ + Q L I LKKLCNHP L+ G E+ I +G
Sbjct: 539 IKKLMKGTGSQP--LKAIGMLKKLCNHPDLL-----DLPEDVEGSEEFIPDDYQSSIAGG 591
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
S S W SGK +L R L + + TDD+IVL+SNYTQTLDL ++CR ++Y
Sbjct: 592 SASRNREIQTW--FSGKFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGV 649
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
LRLDGT +I+KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG NRLVL DPDWNPA+D
Sbjct: 650 LRLDGTMNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINLIGANRLVLMDPDWNPASD 709
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
+QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D
Sbjct: 710 QQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE----RLF 765
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG----AESIGEGDETNSANKNDQSDQE 739
S +LR LF F D + + H+ +C RC+ D G A ++ GD T + N Q+
Sbjct: 766 SVANLRQLFKFQPDTQCDTHDTFNCNRCKG-DKGQFIKAPAMLYGDATTWNHLNHQALAN 824
Query: 740 VTDI 743
DI
Sbjct: 825 NEDI 828
>gi|325089155|gb|EGC42465.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
H88]
Length = 830
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/604 (44%), Positives = 359/604 (59%), Gaps = 74/604 (12%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT---- 222
DG +P+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKT
Sbjct: 201 DGRPKIPVVIDPKLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTVGSN 259
Query: 223 ---------------LQSIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
LQ I LL+TLL Q + GK ++K II P++LV NW E KW+
Sbjct: 260 EFSRWSHGAKYLYFQLQCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFVKWL 319
Query: 267 G----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC 316
G G+ + L R VS S P VLIVSYET R++ +
Sbjct: 320 GEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVRP-----VLIVSYETLRLYVDELK- 373
Query: 317 SESCDLLICDEAHRLKN--DQTLTN-----------------RNDLEEFFAMVNFTNPGI 357
LL+CDE HRLKN QT T +NDL E+F+++NF NP I
Sbjct: 374 DTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNI 433
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG F + YE I+ GR+ ++E++K G E +EL VN+FI+RRTN +LS +LP
Sbjct: 434 LGTRNEFHKKYEMPILRGRDADGSDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPV 493
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K VV C+L P Q++LYN+FI S ++K + K S+ L I LKKLCNHP L+
Sbjct: 494 KYEHVVFCQLAPFQTDLYNYFIQSPDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--N 549
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
+ + PG+ + P + S +W SGKM VL R+L +RQ T+D
Sbjct: 550 LGADLPGSE------QILPDDYVPLESRGRDRDVRSW--YSGKMMVLDRMLARIRQDTND 601
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+IVL+SNYTQTLDLF +LCR R+Y LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSK
Sbjct: 602 KIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSK 661
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCG+NL+G NRLVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++QR
Sbjct: 662 AGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 721
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG 717
Q K+ L + DS+ S + LR+LF F + RS+ H+ C RC+ DG
Sbjct: 722 QSHKQSLSSCV----VDSAEDVERHFSLDSLRELFQFKPETRSDTHDTFKCKRCR--PDG 775
Query: 718 AESI 721
+ I
Sbjct: 776 TQHI 779
>gi|406603681|emb|CCH44834.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
Length = 839
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 266/594 (44%), Positives = 367/594 (61%), Gaps = 49/594 (8%)
Query: 157 VLWQPEEPQNDGGNL--VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
+L + P+++G VP+ +DP L + LRPHQ EGV+F++ CVSGL++ GCI+A
Sbjct: 218 ILGITKNPEDEGKKFPDVPVIIDPKLTKILRPHQVEGVKFLYRCVSGLVDPRA-KGCIMA 276
Query: 215 DDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLI 273
D+MGLGKTLQ IAL++TLL QG GK + K I+V P+SLV NW E+ KW+G G +
Sbjct: 277 DEMGLGKTLQCIALMWTLLKQGPRGKKTIDKCIVVCPSSLVRNWANELTKWLGEGAPTPL 336
Query: 274 AL-CESTR-DDVVSGIDSFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEA 328
A+ +ST+ ++V S I ++ VLI+SYET R + +E LL+ DE
Sbjct: 337 AIDGKSTKPNEVGSSIQQWSLAKGRNVVRPVLIISYETLRRNVENLKNTE-IGLLLADEG 395
Query: 329 HRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
HRLKN +LT +NDL E+FA++NF NPG+LG FR+ +E
Sbjct: 396 HRLKNGDSLTFTSLDSLNCKRRVILSGTPIQNDLSEYFALLNFANPGLLGTRIEFRKNFE 455
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
I+ GR+ AT++E + G ++ LS V++FI+RRTN +LS +LP K V+ L+P
Sbjct: 456 IPILKGRDADATDKEVEDGQKKLGMLSTIVSKFIIRRTNDILSKYLPCKYEHVIFVNLSP 515
Query: 430 LQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE 489
+Q +LY+HFI S ++K+ + Q L I LKKLCNHP LI FE
Sbjct: 516 MQEKLYHHFITSPDIKKLLKGVGSQP--LKAIGLLKKLCNHPDLIN--------LDEDFE 565
Query: 490 DCIRFFPPEMFSGRSGSWTGGDGAWVEL--SGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
P + + +G GG V+ SGK +L R L +++ ++D+IVL+SNYTQ
Sbjct: 566 GSDHLIPDDYINSITG---GGRNREVQTWQSGKFSILERFLAKIKKESNDKIVLISNYTQ 622
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
TLDL ++CR Y LRLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG
Sbjct: 623 TLDLIEKMCRHNHYGNLRLDGTMNINKRQKLVDRFNDPESPEFIFLLSSKAGGCGINLIG 682
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
NRL+L DPDWNPA+D+QA ARVWRDGQKK FIYRF++TG+IEEK++QRQ K L
Sbjct: 683 ANRLILIDPDWNPASDQQALARVWRDGQKKDCFIYRFITTGSIEEKIFQRQSMKMSLSSC 742
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
+ E D ST++LR LF F+ + + H+ HC RC+ +DG ++I
Sbjct: 743 VVDENQDVE----RLFSTDNLRQLFQFNKNTICDTHDTFHCKRCKK-EDGKQTI 791
>gi|449299733|gb|EMC95746.1| hypothetical protein BAUCODRAFT_501788 [Baudoinia compniacensis
UAMH 10762]
Length = 813
Score = 477 bits (1228), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/575 (45%), Positives = 345/575 (60%), Gaps = 61/575 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP + + LRPHQ EGV+F++ C +GL++ GCI+AD+MGLGKTLQ I L++T
Sbjct: 209 VPVVIDPRIAKVLRPHQVEGVKFLYRCTTGLIDDNA-QGCIMADEMGLGKTLQCITLMWT 267
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q D GK ++K +I P+SLV NW E+ KW+G G+ L R
Sbjct: 268 LLKQSPDAGKGTIQKCVIACPSSLVRNWANELVKWLGQDAINPFAVDGKASKEELTMQMR 327
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
+ + P VLIVSYET R++ + + L++CDE HRLKN ++ T
Sbjct: 328 QWAAATGRAVIRP-----VLIVSYETLRLYVQELG-NTPIGLMLCDEGHRLKNGESQTFE 381
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NPG LG FR+ YE I+ GR+ A+
Sbjct: 382 ALNALNVKKRVILSGTPIQNDLSEYFALLNFANPGYLGTRQDFRKQYEIPILRGRDAGAS 441
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + + G ER SEL KVN+FI+RRTN +LS +LP K VV C L P Q +LYN+F+ S
Sbjct: 442 DHDMQRGNERLSELLVKVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVKS 501
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++ + K S+ L I LKKLCNHP L+ + PG C FP E +
Sbjct: 502 PEIQSLL--RGKGSQPLKAIGLLKKLCNHPDLL--NLPDDLPG------CDELFPKEYET 551
Query: 502 ----GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
GR+ SGKM VL R+L +R T D+IVL+SNYTQTLD+F +LCR
Sbjct: 552 KDNRGRNREVNP------SYSGKMQVLDRMLRSIRHETTDKIVLISNYTQTLDVFERLCR 605
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
Y LRLDGT ++SKRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPD
Sbjct: 606 SNSYGCLRLDGTMNVSKRQKLVDKFNDPEGKEFVFLLSSKAGGCGLNLIGANRLVLFDPD 665
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA+D+QA ARVWRDGQKK F+YRF++TGTIEEKV+QRQ K+ L + DS+
Sbjct: 666 WNPASDQQALARVWRDGQKKDCFVYRFIATGTIEEKVFQRQSHKQSLSSCV----VDSAE 721
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
+ + LR+LF + S+ H+ C RC+
Sbjct: 722 DVERHFTLDSLRELFQYRPGTTSDTHDTFKCKRCK 756
>gi|343429051|emb|CBQ72625.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Sporisorium reilianum SRZ2]
Length = 871
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/572 (45%), Positives = 350/572 (61%), Gaps = 57/572 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
+P+ +DP L + LRPHQ EGV+F++ C +GL+ GCI+AD+MGLGKTLQ I L++T
Sbjct: 275 LPVVIDPRLGKVLRPHQVEGVKFLYRCTTGLV-VENAFGCIMADEMGLGKTLQCITLMWT 333
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q K + K IIV P+SLV NW E+ KW+G G++ + E+TR
Sbjct: 334 LLKQSPIPKKTTIDKCIIVCPSSLVRNWANELVKWLGAAAPGNLALDGKLSKDEMIEATR 393
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
+ + T P V+IVSYET R + +E LL+CDE HRLKN +LT +
Sbjct: 394 RWCNASGRAITQP-----VMIVSYETLRNLQEELGNTE-VGLLLCDEGHRLKNADSLTFQ 447
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+FA++NF NP +LG FR+ +E +I+ GR+ AT
Sbjct: 448 ALTQIKVRRRVILSGTPIQNDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEAT 507
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+++++ E+ S+LSA V++FI+RRTN LLS +LP K VV CK++P Q +LY FI S
Sbjct: 508 DKQQQEANEKLSQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMSPFQLDLYRLFIRS 567
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K+ + Q L I LKKLCNHP L+ + E +FP E ++
Sbjct: 568 PEIKKLLRGTGSQP--LKAIGILKKLCNHPDLL--------DLPSDLEGSEEYFP-EGYT 616
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
R ELSGKM VL R L +R T+D+IVL+SNYTQTLD+F ++CR R+
Sbjct: 617 PRDRRQVNP-----ELSGKMMVLQRFLETIRATTNDKIVLISNYTQTLDVFERMCRANRW 671
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
RLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 672 GMFRLDGTMTINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 731
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
+D+QA ARVWRDGQKK F+YRF++TG+IEEK+ QRQ K+ L + E D++
Sbjct: 732 SDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQDAA----R 787
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S EDLR LFTF + + H+ C RC++
Sbjct: 788 HFSGEDLRALFTFKEQTACDTHDTYKCKRCKS 819
>gi|392567178|gb|EIW60353.1| DNA repair protein SNF2 family [Trametes versicolor FP-101664 SS1]
Length = 817
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/571 (45%), Positives = 354/571 (61%), Gaps = 49/571 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G++ +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 213 VPVVIDPRLTKVLRPHQVEGVKFLYRCTTGMV-VENQYGCIMADEMGLGKTLQCIALLWT 271
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIAL-CESTRDDVVSGID 288
LL Q G+P ++K II P+SLV NW E+ KW+G + +A+ + + +++ +
Sbjct: 272 LLKQSPHAGRPTIEKCIIACPSSLVKNWANELVKWLGKDAISALAIDGKGGKAEMLEKVA 331
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ C S V+IVSYET R S + + S LL+CDE HRLKN ++LT +
Sbjct: 332 RWVASCGRNVSQPVMIVSYETLRTLSVHLA-NCSIGLLLCDEGHRLKNSESLTFQALNGL 390
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL E+F+++NF NP LG FR+ +E +II GR+ AT+ K
Sbjct: 391 NVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADATDAAKS 450
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
++ EL A V +FI+RRTN LLS +LP K +VV CKL+ Q LY FI S ++
Sbjct: 451 ECEKKLKELGALVAKFIIRRTNDLLSKYLPVKYEQVVFCKLSDFQLSLYRLFISSPEIQA 510
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ +S+ L I LKKLCNHP+L+ PG C + P E ++G
Sbjct: 511 LL--RGAESQPLKAINILKKLCNHPELL------DLPGD--LRGCEKLLP-EGYAGAGA- 558
Query: 507 WTGGD-----GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
TG D G E GK VL R L + T+D+IVL+SNYTQTLDLF +LCR ++Y
Sbjct: 559 -TGRDKGRNQGVNCEWGGKFLVLERFLHRIHTETNDKIVLISNYTQTLDLFEKLCRSKKY 617
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
+ RLDGT +I+KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG NRL+LFDPDWNPA
Sbjct: 618 GHFRLDGTMTINKRQKLVDSFNDPNGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPA 677
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ +K+ L + E+ D+
Sbjct: 678 ADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDAE----R 733
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
S + LR LF F+++ E HE C RC+
Sbjct: 734 HFSIDALRKLFLFNENTLCETHETFKCKRCK 764
>gi|194386250|dbj|BAG59689.1| unnamed protein product [Homo sapiens]
Length = 567
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/523 (47%), Positives = 332/523 (63%), Gaps = 39/523 (7%)
Query: 213 LADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQL 272
+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP 60
Query: 273 IALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+A+ ++D++ ++ F + S +LI+SYETFR+H S L+ICDE H
Sbjct: 61 LAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLVICDEGH 119
Query: 330 RLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN + T + NDL E+F++V+F N GILG A F++++E
Sbjct: 120 RLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFEL 179
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPL
Sbjct: 180 PILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 239
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q+ELY F+ + E L+ IT+LKKLCNHP LIYD G G D
Sbjct: 240 QTELYKRFLRQAKPAEELLEGKMSVSPLSSITSLKKLCNHPALIYDKCVEEEDGFVGALD 299
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
FPP S +LSGKM VL +L R R+ D++VLVSNYTQTLD
Sbjct: 300 ---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLD 347
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
LF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NR
Sbjct: 348 LFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANR 407
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
LV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L +
Sbjct: 408 LVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 467
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 468 EEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 506
>gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera
kw1407]
Length = 809
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/575 (46%), Positives = 355/575 (61%), Gaps = 57/575 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+FM+ CV+G+++A +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 204 VPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDAKA-NGCIMADEMGLGKTLQCITLLWT 262
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + G+P ++KAI+ P+SLV NW E+ KW+G G+ L R
Sbjct: 263 LLKQSPEAGRPSIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEDLTRQLR 322
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLT 338
++ + T P V+IVSYET R++ + ++ L++CDE HRLKN QT +
Sbjct: 323 QWAIASGRAVTRP-----VIIVSYETLRLNVEELKHTK-IGLMLCDEGHRLKNGDSQTFS 376
Query: 339 N-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA+++F NP +LG FRR +E I+ GR+ A
Sbjct: 377 ALNNLQVSRRVILSGTPIQNDLSEYFALISFANPDLLGSRLEFRRRFELPILRGRDADAG 436
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E+K G +EL A VN+FI+RRTN +LS +LP K VV C L P Q +LYN+FI S
Sbjct: 437 PDERKKGDACLAELLAVVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITS 496
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+++ + K S+ L I LKKLCNHP L+ + PG+ E C P + +
Sbjct: 497 PDIQALL--RGKGSQPLKAINILKKLCNHPDLL--NLADDLPGS---ERCC---PDDYVA 546
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ W SGKM VL R+L +R T+D+IVL+SNYT TLDLF +LCR R Y
Sbjct: 547 KEARGRDREVKPW--YSGKMMVLERMLARIRAETNDKIVLISNYTSTLDLFERLCRNRAY 604
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT ++SKRQKLV+ FNDP +EF+FLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 605 GCLRLDGTMNVSKRQKLVDRFNDPDGSEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 664
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG- 680
D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + D++A
Sbjct: 665 ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSTCV----VDAAAGDDV 720
Query: 681 -NFLSTEDLRDLFTFH--DDVRSEIHENMHCTRCQ 712
S + L++LF F RS+ H+ C RC+
Sbjct: 721 ERHFSLDSLKELFQFRGAGTTRSDTHDTFKCKRCR 755
>gi|388854041|emb|CCF52385.1| probable RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
hordei]
Length = 865
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/572 (45%), Positives = 351/572 (61%), Gaps = 57/572 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL+ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 269 VPVVIDPRLGKVLRPHQVEGVKFLYRCTTGLI-VENAYGCIMADEMGLGKTLQCITLMWT 327
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q GK + K IIV P+SLV NW E+ KW+G G++ + E+TR
Sbjct: 328 LLKQSPIAGKSTIDKCIIVCPSSLVRNWANELIKWLGAAAPGNLALDGKLSKDEMIEATR 387
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
+ + T P V+IVSYET R + +E LL+CDE HRLKN +LT +
Sbjct: 388 RWCNASGRAITQP-----VMIVSYETLRNLQEELGNTE-VGLLLCDEGHRLKNADSLTFQ 441
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+FA++NF NP +LG FR+ +E +I+ GR+ AT
Sbjct: 442 ALTQIKVRRRVILSGTPIQNDLSEYFALLNFANPELLGSRIDFRKNFEIAILKGRDSEAT 501
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E++++ E+ ++LSA V++FI+RRTN LLS +LP K VV CK+ P Q +LY FI S
Sbjct: 502 EKQQQEANEKLAQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLFIRS 561
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K+ + Q L I LKKLCNH + G E ++FP E ++
Sbjct: 562 PEIKKLLRGTGSQP--LKAIGILKKLCNH-----PDLLDLPSDLDGSE---QYFP-EGYT 610
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
R ELSGKM VL R L +R T+D+IVL+SNYTQTLD+F ++C+ R+
Sbjct: 611 PRDRRHVNP-----ELSGKMMVLQRFLETIRATTNDKIVLISNYTQTLDVFERMCQANRW 665
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
RLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCGLNLIG NRLVLFDPDWNPA
Sbjct: 666 GMFRLDGTMTINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 725
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
+D+QA ARVWRDGQKK F+YRF++TG+IEEK+ QRQ K+ L + E D++
Sbjct: 726 SDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQDAA----R 781
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S EDLR LFTF ++ + H+ C RC+N
Sbjct: 782 HFSGEDLRALFTFKEETVCDTHDTYKCKRCKN 813
>gi|320581998|gb|EFW96217.1| DNA-dependent ATPase [Ogataea parapolymorpha DL-1]
Length = 828
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/585 (45%), Positives = 357/585 (61%), Gaps = 56/585 (9%)
Query: 160 QPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGL 219
+PEE VP+ +DP L + LRPHQ GV+F++ C +GL++A GCI+AD+MGL
Sbjct: 217 RPEEEVMKQFPNVPVVIDPKLAKILRPHQVAGVKFLYRCTAGLVDARA-KGCIMADEMGL 275
Query: 220 GKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL--- 275
GKTLQ + L++TLL QG GK ++K +IV P+SLV NW EI KW+G G + +A+
Sbjct: 276 GKTLQCLTLMWTLLRQGPRGKKTIEKCVIVCPSSLVKNWANEIDKWLGKGTLNSLAMDGK 335
Query: 276 --------CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
E R + S P VLI+SYET R + +E L++ DE
Sbjct: 336 GSKGAGDMAEVLRQWARAKGRSIVRP-----VLIISYETLRRNVENLEGTE-IGLILADE 389
Query: 328 AHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLKN +LT +NDL E+F+++NF+NPG+LG A FR+ Y
Sbjct: 390 GHRLKNGDSLTFTALNSLNCERRVILSGTPIQNDLSEYFSLLNFSNPGVLGSRAQFRKNY 449
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ GR+ ATEEE+K G E+ EL+ V++FI+RRTN +LS +LP K VV C L+
Sbjct: 450 ELDILRGRDSLATEEERKKGDEKLQELTELVSRFIIRRTNDILSKYLPVKYEYVVFCNLS 509
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
LQS+LY HF+ S + + I Q L I L+KLC HP+L+ D +G
Sbjct: 510 ELQSKLYRHFVTSPEINKLIRGLGSQP--LKAIGLLRKLCTHPRLL-DLPND----ISGS 562
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
E+ + P+ + +G SGK +L R L +R+ TDD+IVL+SN+TQT
Sbjct: 563 ENIL----PDDYDFGNGR---NKDVQTWYSGKFAMLERFLFKIRKETDDKIVLISNFTQT 615
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
LDL +LCR R+ +RLDG+ I+KRQKLV+ FNDP+ +EFVFLLSSKAGGCG+NLIG
Sbjct: 616 LDLIEKLCRHHRFGTVRLDGSLGINKRQKLVDRFNDPNADEFVFLLSSKAGGCGINLIGA 675
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
NRL+L DPDWNPA+D+QA ARVWRDGQKK FIYRF++TGTIEEK++QRQ +K L +
Sbjct: 676 NRLILLDPDWNPASDQQALARVWRDGQKKNCFIYRFIATGTIEEKIFQRQSAKMELSTCV 735
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
DS+ S+E+L+ LF ++D E H+ C RCQN
Sbjct: 736 ----VDSNEDVERQFSSENLKQLFLYNDQTPCETHDTYKCKRCQN 776
>gi|402588718|gb|EJW82651.1| hypothetical protein WUBG_06439, partial [Wuchereria bancrofti]
Length = 591
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/528 (48%), Positives = 340/528 (64%), Gaps = 53/528 (10%)
Query: 156 LVLWQPEE-PQNDGGNL------VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
LVL+ P E +D L V + VDP L LRPHQREGV+FM++CV+G+
Sbjct: 81 LVLFTPPELSAHDALKLDTTNKQVHVVVDPTLSAVLRPHQREGVKFMYDCVTGV-RIPSA 139
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
HGCI+AD+MGLGKTLQ I L++TLL QG D KP + KA+IV P+SLV NW+ EI+KW+GG
Sbjct: 140 HGCIMADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKAVIVCPSSLVKNWDKEIRKWLGG 199
Query: 269 RVQLIALCESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
RV + + +D++ ++ F C + VLI+SYETFR+H+S E L+I
Sbjct: 200 RVNALPVDSGGKDEIDRNLEKFMSQMGVRCPT-PVLIISYETFRLHASILLQKE-IGLII 257
Query: 325 CDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFR 365
CDE HRLKN T + NDL E+++++NF NPG+LG A+ F+
Sbjct: 258 CDEGHRLKNSDNQTYQALFGLKCERRILISGTPIQNDLLEYYSLINFVNPGLLGTASEFK 317
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
R +E I+ GR+ AT+ +++ G +E+S+ V++ I+RRT+ALL+ +LP K ++CC
Sbjct: 318 RRFENIILRGRDADATDAQREKGDTALTEMSSIVSKCIIRRTSALLTKYLPVKYELIICC 377
Query: 426 KLTPLQSELYNHFIHSKNV--KRAISEETKQSKI----LAYITALKKLCNHPKLIYDTIK 479
KLT LQ +LYN I + ++ K+ ++E K KI L++IT LKKLCNHP+LI + +
Sbjct: 378 KLTELQEKLYNQLISAFSMGGKQKVTE-GKCDKITGTALSFITNLKKLCNHPQLILNKCQ 436
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
GFEDC++ FP + G SGKM VL LL R T+D+
Sbjct: 437 KKE---EGFEDCLKLFPGDF----------GKKFEPAFSGKMKVLDYLLAATRATTNDKF 483
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
+LVSNYTQT+D F +LC+ RRYPY+RLDGT +I +R KLV FNDP E+VFLLSSKAG
Sbjct: 484 ILVSNYTQTIDAFVELCQLRRYPYIRLDGTCTIKQRAKLVEKFNDPESIEYVFLLSSKAG 543
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
GCGLNLIG NRL++FDPDWNPAND QA ARVWRDGQKK FIYR LS
Sbjct: 544 GCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKNCFIYRLLSV 591
>gi|58266612|ref|XP_570462.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21]
gi|134110952|ref|XP_775940.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226695|gb|AAW43155.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 818
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/578 (45%), Positives = 355/578 (61%), Gaps = 50/578 (8%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
+E +N VP+ +DP L + LRPHQ EGV+F++ C +GL+ A G GCI+AD+MGLGK
Sbjct: 211 DEKKNKQVVKVPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLI-ADGAWGCIMADEMGLGK 269
Query: 222 TLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQ-LIALCES 278
TLQ IALL+TLL Q GKP +K II PTSLV NW E+ KW+G G V ++ +
Sbjct: 270 TLQCIALLWTLLKQSPVAGKPTCEKVIIACPTSLVGNWANELVKWLGTGAVSPMVVDGKG 329
Query: 279 TRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
+ +++ + + +L V+IVSYET R + + E LL+ DE HRLKN +
Sbjct: 330 GKAELIPAVRRWVQAHGRNVTLPVMIVSYETLRTLQEELASCE-IGLLLADEGHRLKNAE 388
Query: 336 TLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
TLT + NDL E+FA++NF NP LG F++ +E+ I+ GR
Sbjct: 389 TLTFQALTSLKVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSKLDFKKNFESKILRGR 448
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
+ ATE+EK + EL V++FI+RRTN LLS +LP K VV C+ +PLQ+ LYN
Sbjct: 449 DADATEKEKLESDAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYN 508
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
F+ SK+V+R + K S+ L I L+KL NHP L+ + PG+
Sbjct: 509 LFVTSKDVQRLL--RGKDSQPLKAIGLLRKLVNHPDLL--NLPEDLPGSEALL------- 557
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
P+ ++G+ T + SGK VL R+L H+ T+D+IVL+SN TQTLDL +LC
Sbjct: 558 PDGYNGKGRDRTVN----CQYSGKFVVLERMLDHINHHTNDKIVLISNATQTLDLMEKLC 613
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R +RY YLRLDG+ S+ KR K+V FN P EFVFLLSSKAGGCG+NLIG NRLVLFDP
Sbjct: 614 RSKRYGYLRLDGSMSVPKRSKIVAQFNQPESKEFVFLLSSKAGGCGINLIGANRLVLFDP 673
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA+D+QA ARVWRDGQKK F+YRF +TGTIEEK++QRQ K+ L + E D++
Sbjct: 674 DWNPASDQQALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDEAEDTA 733
Query: 677 A--TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
TQG DLR LF F+ + + H+ C RC+
Sbjct: 734 RHFTQG------DLRQLFNFNPETLCDTHDTYKCKRCR 765
>gi|430812744|emb|CCJ29865.1| unnamed protein product [Pneumocystis jirovecii]
Length = 796
Score = 474 bits (1220), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/571 (45%), Positives = 353/571 (61%), Gaps = 53/571 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L + LRPHQ EGV+F+++CV+G+++ +GCI+AD+MGLGKTLQ I L++T
Sbjct: 198 VAVVIDPKLSKILRPHQIEGVKFLYKCVTGMVDFRA-NGCIMADEMGLGKTLQCITLMWT 256
Query: 232 LLCQGFDGK-PMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQ-LIALCESTRDDVVSGID 288
LL Q K ++KAIIV P+SLV NW E+ KW+G G + LI ++ RD +V +
Sbjct: 257 LLKQSPQAKRSTIQKAIIVCPSSLVRNWANELDKWLGKGTINPLIIDKKNNRDQLVLSLS 316
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESC--DLLICDEAHRLKNDQTLTN---- 339
+ +LI+SYE RM+ + + C LL+CDE HRLKN ++LT
Sbjct: 317 KWVSATGKDIVQPILIISYEMLRMNIDQL---KKCPIGLLLCDEGHRLKNSESLTFSALD 373
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL E+F+++NF NPG+LG + FR+ +E I+ GR+ T+++
Sbjct: 374 SLQVQRRIILSGTPIQNDLSEYFSLLNFVNPGLLGSRSEFRKTFELPILKGRDALGTDKD 433
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+++G + ELS VN+FI+RRTN +LS +LP K VV C L+P Q +LY F+ S+ V
Sbjct: 434 REIGDHKLEELSVLVNKFIIRRTNDILSKYLPVKYEHVVFCNLSPFQKDLYKSFVSSREV 493
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKL--IYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
+ Q L I LKKLCNHP L I + +K FE C FP +
Sbjct: 494 NNLVKGIGNQP--LKAIDFLKKLCNHPTLLDIENDLKQ-------FEHC---FPNDFIPK 541
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
S + SGKM VL R+L +R+ T+D+IVL+SNYTQTL+L +LCR RRY
Sbjct: 542 NSKD----RDIKIWYSGKMMVLDRMLARIRKDTNDKIVLISNYTQTLNLLEKLCRSRRYG 597
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LRLDGT + +KRQKL++ FNDP +EF+FLLSSKAGGCGLNLIG NRL+LFDPDWNPA
Sbjct: 598 SLRLDGTMNTNKRQKLIDKFNDPESDEFIFLLSSKAGGCGLNLIGANRLILFDPDWNPAA 657
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D+QA ARVWRDGQKK FIYRF++TGTIEEK++QRQ K+ L + D +
Sbjct: 658 DQQALARVWRDGQKKDCFIYRFIATGTIEEKIFQRQSHKQSLSSCV----VDEAQNVERH 713
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S + LR LF + D + H+ C RC+N
Sbjct: 714 FSLDSLRQLFELNLDTLCDTHDTFKCKRCKN 744
>gi|328863054|gb|EGG12154.1| hypothetical protein MELLADRAFT_76598 [Melampsora larici-populina
98AG31]
Length = 823
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/580 (45%), Positives = 353/580 (60%), Gaps = 62/580 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G++ G+HGCI+AD+MGLGKTLQ I LL+T
Sbjct: 229 VPVVLDPRLTKTLRPHQVEGVKFLYRCTTGMVEK-GVHGCIMADEMGLGKTLQCITLLWT 287
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q GKP + KAI+ P+SLV NW E+ KW+G G+ L +S R
Sbjct: 288 LLKQSPIPGKPAINKAIVACPSSLVKNWANELDKWLGAGALVPLAVDGKQSKADLLKSVR 347
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
V++ + P V+IVSYET R + + LL+CDE HRLKN + T
Sbjct: 348 QWVLADGRRVSQP-----VMIVSYETLRGSLVEELGTAPIGLLLCDEGHRLKNAENQTYA 402
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+FA++NF NP LGD A FR+ YE I+ GR+ ++
Sbjct: 403 ALNSIKCEKRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKNYELPILRGRDSDSS 462
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ E L + EL+ KV +FI+RRTN LLS +LP K VV C + Q +LY HFI+S
Sbjct: 463 QSEVTLAETKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSTFQRDLYRHFINS 522
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
++K+ + Q L + L+KLCNHP L+ + PG+ E C PE ++
Sbjct: 523 PDLKKLLRGVGCQP--LKMLGILRKLCNHPDLL--DLHQDIPGS---EKCF----PEGYT 571
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ A ELSGKM VL R+ R +T D+IVL+SN+TQTLD+ ++CRERR+
Sbjct: 572 SKDSR----APARPELSGKMVVLERI----RTQTTDKIVLISNFTQTLDVMEKMCRERRW 623
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT I+KRQKLV+ FN+P EF+FLLSSKAGGCG+NLIG NRL+LFDPDWNPA
Sbjct: 624 GCLRLDGTMQITKRQKLVDRFNNPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPA 683
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
+D+QA ARVWRDGQKK F+YRF+ TG++EEKV+QRQ K L + EQ D +
Sbjct: 684 SDQQALARVWRDGQKKECFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQEDDA----R 739
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LFT ++ S+ H+ C RC+ DG + I
Sbjct: 740 MFSKDMLRELFTLNEGTASDTHDVYKCKRCK---DGKQFI 776
>gi|321257722|ref|XP_003193686.1| DNA recombination and repair protein Rad54B [Cryptococcus gattii
WM276]
gi|317460156|gb|ADV21899.1| DNA recombination and repair protein Rad54B, putative [Cryptococcus
gattii WM276]
Length = 818
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/584 (45%), Positives = 359/584 (61%), Gaps = 50/584 (8%)
Query: 156 LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILAD 215
++L +E +N VP+ +DP L + LRPHQ EGV+F++ C +GL+ A G GCI+AD
Sbjct: 205 VILGIVDEKKNKQVVKVPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLI-ADGAWGCIMAD 263
Query: 216 DMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQ-L 272
+MGLGKTLQ IALL+TLL Q GKP +K +I PTSLV NW E+ KW+G G V +
Sbjct: 264 EMGLGKTLQCIALLWTLLKQSPIAGKPTCEKVVIACPTSLVGNWANELVKWLGSGAVNPM 323
Query: 273 IALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ + + +++ + + +L V+IVSYET R + + E LL+ DE H
Sbjct: 324 VVDGKGGKAELIPAVRRWVQAHGRNVTLPVMIVSYETLRTLQEELASCE-IGLLLADEGH 382
Query: 330 RLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN +TLT + NDL E+FA++NF NP LG F++ +E+
Sbjct: 383 RLKNAETLTFQALTSLKVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSKLDFKKNFES 442
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ GR+ ATE+EK + EL V++FI+RRTN LLS +LP K VV C+ +PL
Sbjct: 443 KILRGRDADATEKEKLESDAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSPL 502
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q+ LYN F+ SK+V+R + K S+ L I L+KL NHP L+ + PG+
Sbjct: 503 QASLYNLFVTSKDVQRLL--RGKDSQPLKAIGLLRKLVNHPDLL--NLPEDLPGSETLL- 557
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
P+ ++G+ T + SGK VL R+L H++ T+D+IVL+SN TQTLD
Sbjct: 558 ------PDGYNGKGRDRTVN----CQYSGKFVVLERMLDHIKHHTNDKIVLISNATQTLD 607
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
L +LCR +RY YLRLDG+ S+ KR K+V FN P EFVFLLSSKAGGCG+NLIG NR
Sbjct: 608 LMEKLCRSKRYGYLRLDGSMSVPKRSKIVAQFNQPESKEFVFLLSSKAGGCGINLIGANR 667
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
LVLFDPDWNPA+D+QA ARVWRDGQKK F+YRF +TGTIEEK++QRQ K+ L +
Sbjct: 668 LVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVD 727
Query: 671 EQTDSSA--TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
E D++ TQG DLR LF F+ + + H+ C RC+
Sbjct: 728 EAEDTARHFTQG------DLRQLFKFNPETLCDTHDTYKCKRCR 765
>gi|428672984|gb|EKX73897.1| recombinational repair protein, putative [Babesia equi]
Length = 1841
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 269/606 (44%), Positives = 359/606 (59%), Gaps = 74/606 (12%)
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
+K I+ P SLVSNWE+EIKKW+ G+ A+ +S R+ V+S + F +S +VLI
Sbjct: 1249 ARKCAIICPASLVSNWESEIKKWLRGKCPCTAIADSGREKVISAFEGFKYDNNS-RVLIS 1307
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDL 343
SYET+RMH ++ DL+ICDEAHRLKND+T T+ +NDL
Sbjct: 1308 SYETYRMHCARLQ-GVPIDLIICDEAHRLKNDKTQTSLSISSSPAKMRLMLSGTPIQNDL 1366
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
EF+++++ NP +LGD FRR + I+ GREP AT E++++ +R +ELS NQF+
Sbjct: 1367 NEFYSLISLCNPDVLGDVNNFRRCFANPILIGREPDATPEQQRMAGDRLAELSHITNQFV 1426
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRTN LLS LPPKII V C LT +Q +Y F++SK K I +E S+ L I +
Sbjct: 1427 LRRTNVLLSKVLPPKIILNVFCNLTDIQKTIYKSFVNSKRWKNIIKDEGVFSRTLTAIQS 1486
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L KLCNHP LI K G G D F + ++ +LSGK+ V
Sbjct: 1487 LMKLCNHPLLI----KRG--GLLSTPDVDDLFENIELASKNNK---HKCCRCDLSGKILV 1537
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L RLL H+R+ +DR+V++SNYTQTLD+F +LCRE YP++RLDGT SI KR KLV FN
Sbjct: 1538 LYRLLYHIRKNGNDRVVIISNYTQTLDIFERLCRECNYPFVRLDGTISIKKRHKLVTTFN 1597
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
DP+ N F+FLLSSKAGGCG+NLIG NRLVLFDPDWNPANDKQA ARVWRDGQKK +IYR
Sbjct: 1598 DPTTNSFIFLLSSKAGGCGINLIGANRLVLFDPDWNPANDKQALARVWRDGQKKVCYIYR 1657
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
F STGTIEEK+YQRQ+ K+GL ++ TD + LS E+L++LF + D + S+ H
Sbjct: 1658 FFSTGTIEEKIYQRQICKDGLSSML---VTDGINELKDSLSGEELKNLFDYKDSILSDTH 1714
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQL 763
+ + CTRC + G E++ E+++
Sbjct: 1715 DTIDCTRC---NRGEETV---------------------------------PFVPQEREV 1738
Query: 764 GTPLEEDLNNWGHHFYSMSVPDAIL-QASAGDEVTFVFTN-QVDGKLVPIESKVSPKMQA 821
LEEDLN W HH +VPD L +A+ +E + +D K VPI +S +++
Sbjct: 1739 ---LEEDLNTWAHHTDLSTVPDEFLVRAALRNEPKSPYPEVDIDDKFVPISFVMSCRIEF 1795
Query: 822 TEGNKN 827
N N
Sbjct: 1796 NTENAN 1801
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 103/183 (56%), Gaps = 19/183 (10%)
Query: 64 NLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARR--LCARKRFVPWGSS 121
N+ + R +L +LSV G V KPFK P G+ G + ++R L R R V
Sbjct: 28 NVCLIRAPIL-SLLSVEAGPVVLLKPFKSPLE-GHTPGLSEESQRKTLGCRIRGVTKSFL 85
Query: 122 RPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLV 181
R +I D +EN LPP +PL L+ P D +V I VD +L
Sbjct: 86 RDFRASIYETKD--EALEN--------LPPD-NPLTLYT--SPPEDEVQVV-IKVDSMLS 131
Query: 182 RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKP 241
RFLR HQR+GVQF+F+C+ GL G GCILADDMGLGKTLQSI +++TLL QGFD +P
Sbjct: 132 RFLRDHQRQGVQFIFDCLMGLKEFNG-RGCILADDMGLGKTLQSITVMWTLLKQGFDNRP 190
Query: 242 MVK 244
+K
Sbjct: 191 GLK 193
>gi|405120211|gb|AFR94982.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
Length = 818
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/568 (46%), Positives = 352/568 (61%), Gaps = 50/568 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL+ A G GCI+AD+MGLGKTLQ IALL+T
Sbjct: 221 VPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLI-ADGAWGCIMADEMGLGKTLQCIALLWT 279
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQ-LIALCESTRDDVVSGID 288
LL Q GKP +K II PTSLV NW E+ KW+G G V ++ + + +++ +
Sbjct: 280 LLKQSPVAGKPTCEKVIIACPTSLVGNWANELIKWLGSGAVNPMVVDGKGGKAELIPAVR 339
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ +L V+IVSYET R + + E LL+ DE HRLKN +TLT +
Sbjct: 340 RWVQAHGRNVTLPVMIVSYETLRTLQEELASCE-IGLLLADEGHRLKNAETLTFQALTSL 398
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL E+FA++NF NP LG F++ +E+ I+ GR+ ATE+EK
Sbjct: 399 KVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKL 458
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ EL V++FI+RRTN LLS +LP K VV C+ +PLQ+ LYN F+ SK+V+R
Sbjct: 459 ESDAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQR 518
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ K S+ L I L+KL NHP L+ + PG+ P+ ++G+
Sbjct: 519 LL--RGKDSQPLKAIGLLRKLVNHPDLL--NLPEDLPGSETLL-------PDGYNGKGRD 567
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
T + SGK VL R+L H++ T+D+IVL+SN TQTLDL +LCR +RY YLRL
Sbjct: 568 RTVN----CQYSGKFVVLERMLDHIKHHTNDKIVLISNATQTLDLMEKLCRGKRYGYLRL 623
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG+ S+ KR K+V FN P EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA+D+QA
Sbjct: 624 DGSMSVPKRSKIVAQFNQPESKEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPASDQQA 683
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA--TQGNFLS 684
ARVWRDGQKK F+YRF +TGTIEEK++QRQ K+ L + E D++ TQG
Sbjct: 684 LARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDEAEDTARHFTQG---- 739
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
DLR LF F+ + + H+ C RC+
Sbjct: 740 --DLRQLFKFNPETLCDTHDTYKCKRCR 765
>gi|403166558|ref|XP_003889973.1| DNA repair and recombination protein RAD54 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|375166302|gb|EHS63112.1| DNA repair and recombination protein RAD54 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 1049
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/567 (45%), Positives = 351/567 (61%), Gaps = 45/567 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G++ G GCI+AD+MGLGKTLQ I LL+T
Sbjct: 451 VPVVLDPRLSKTLRPHQVEGVKFLYRCATGMVEQ-GAKGCIMADEMGLGKTLQCITLLWT 509
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q GKP ++KAI+ P+SLV NW E KW+G G + +A+ + T+ ++++ +
Sbjct: 510 LLKQSPIAGKPSIEKAIVACPSSLVKNWANEFDKWLGPGAINPLAVDGKQTKANLLTSVR 569
Query: 289 SFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLTN---- 339
+ V+IVSYET R + LL+CDE HRLKN +QT
Sbjct: 570 QWVSATGRRVPQPVMIVSYETLRGTLVEELGRTPVGLLLCDEGHRLKNADNQTYAALNGI 629
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+FA++NF NP LGD A FR+ YE I+ GR+ ++E E
Sbjct: 630 NCERRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKSYELPILRGRDSDSSESEVA 689
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
L + EL+ KV +FI+RRTN LLS +LP K VV C + Q +LY HFI S ++++
Sbjct: 690 LAEAKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSAFQLDLYRHFIDSPDLQK 749
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ Q L + L+KLCNHP L+ ++ PG+ ++FP S +
Sbjct: 750 LLRGVGCQP--LKMLGILRKLCNHPDLL--DLQQDIPGSE------KYFPDGYRSKDPRA 799
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
A ELSGKM VL R L ++ T D+IVL+SN+TQTLD+ ++CRERR+ LRL
Sbjct: 800 -----PARPELSGKMTVLERFLHKIKTETTDKIVLISNFTQTLDVMEKMCRERRWGNLRL 854
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+LFDPDWNPA+D+QA
Sbjct: 855 DGTMQITKRQKLVDRFNDPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQA 914
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF+ TG++EEKV+QRQ K L + EQ D + S E
Sbjct: 915 LARVWRDGQKKNCFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQED----EARMFSRE 970
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LF +++ +S+ H+ C RC++
Sbjct: 971 SLKELFRLNENTQSDTHDVYKCKRCRD 997
>gi|330840974|ref|XP_003292481.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
gi|325077256|gb|EGC30980.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
Length = 928
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 272/677 (40%), Positives = 376/677 (55%), Gaps = 94/677 (13%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P + LVL+ P + G N + + VDP+L LRPHQREGV+F+F+C+ G +
Sbjct: 243 PLAPNSLVLYTPVD--MTGENRIHVVVDPILSAKLRPHQREGVKFVFDCLLGFRGGFKGN 300
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCILADDMGLGK++Q+I +L+TLL QG G+P KKA+IV P SLV NW E+KKW+G
Sbjct: 301 GCILADDMGLGKSIQAITILWTLLKQGPKGEPTAKKAVIVAPCSLVGNWCKELKKWLGDG 360
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ +A+ EST+ + P VLI+SY+ R++ S L+ICDE H
Sbjct: 361 INTVAIGESTKTGRAKLSELEFGPAD---VLIISYDQLRIYCEDVCKISSIGLVICDEGH 417
Query: 330 RLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN + T + NDL EF+AMVNF NPG+L + A F+ Y+
Sbjct: 418 RLKNAEIKTTKAVSMIPTPRRVILSGTPIQNDLTEFYAMVNFVNPGLLKNVATFKNVYDA 477
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ R P ATEEE+K+G ERS+ELS QFILRRT + + +LPPK+ VV CKLT L
Sbjct: 478 PIVASRSPEATEEERKIGRERSAELSRLTGQFILRRTAIVNTQYLPPKVEYVVFCKLTDL 537
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q +Y H I K K + S L IT LKKL N +L+Y + T +
Sbjct: 538 QKSIYRHLI--KEAKDSCFASA--SGALPLITTLKKLSNCAELVY--LPDKEAPTEVDKS 591
Query: 491 CIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR-QRTDDRIVLVSNY 545
+ FP P++F + S K+ + RLL +R ++ D++V++SNY
Sbjct: 592 VLSLFPKEWNPKVFQP-------------QYSSKLLFVDRLLTKIRDSKSGDKVVIISNY 638
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNL 605
TQTL++ A +C+ R Y Y +LDG+T +KRQ+LV+ +NDP + EF FLLSSKAGG GLNL
Sbjct: 639 TQTLEVLAIMCKTRGYAYFQLDGSTPNAKRQQLVDLYNDPKRPEFAFLLSSKAGGVGLNL 698
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
IGGN LVLFD DWNPAND Q+ ARVWR+GQKK V IYR +TGTIEEK++QRQ++K+ L
Sbjct: 699 IGGNHLVLFDADWNPANDAQSMARVWREGQKKVVSIYRTFTTGTIEEKIFQRQLTKQALS 758
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGD 725
I + +++S T+DL+D+F + +D + H+ + C
Sbjct: 759 TSITEGDSENSPA----FDTKDLKDIFNYREDTICDTHDMLSCK---------------- 798
Query: 726 ETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPD 785
C + + + T +LN+W H F + D
Sbjct: 799 --------------------------CAPSARIPKHKRDTLSINELNSWQHVFEMDKLKD 832
Query: 786 AILQASAGDEVTFVFTN 802
+ A+ D V+FVF N
Sbjct: 833 PKVAAACQDIVSFVFVN 849
>gi|312383263|gb|EFR28419.1| hypothetical protein AND_03670 [Anopheles darlingi]
Length = 814
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 288/705 (40%), Positives = 395/705 (56%), Gaps = 109/705 (15%)
Query: 150 PPGVDPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
P + LVL+ P E+ + D L V + VDPLL LRPHQREGV+FM++CV+G
Sbjct: 142 PFACNALVLYSPPELSEHEKLKMDASKLPVHVVVDPLLGNILRPHQREGVRFMYDCVTG- 200
Query: 203 LNAAG-IHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAE 261
A G +GCI+AD+MGLGKTLQ I LL+TLL Q D KP + KAIIV P+SLV NW E
Sbjct: 201 --AKGDFNGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPTIGKAIIVCPSSLVKNWYKE 258
Query: 262 IKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ---VLIVSYETFRMHSSKFSCSE 318
KW+G RV +A+ +++ ++ + S VLI+SYETFR+++ + SE
Sbjct: 259 FGKWLGCRVNCLAMDGGSKEHTTKELEQYMANQSYRHGTPVLIISYETFRLYADILNASE 318
Query: 319 SCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILG 359
++CDE HRLKN + LT + NDL E++++++F NPG+LG
Sbjct: 319 -VGAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLG 377
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
A FR+ YE I+ G++ +T+ E++ ER EL+A VN+ ++RRT+ALL+ +LP K
Sbjct: 378 TTAEFRKQYEIPILRGQDANSTDTEREKAAERLQELAALVNRCMIRRTSALLTKYLPVKF 437
Query: 420 IEVVCCKLTPLQS-ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI 478
++ +QS YN+ S+ L+ IT LKKLCNHP L+YD I
Sbjct: 438 ------EMNRIQSGRAYNNNGQSRKATLTA---------LSNITTLKKLCNHPDLVYDKI 482
Query: 479 KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR 538
+ G GFE P +S R EL K+ +L +L ++ T+D+
Sbjct: 483 QEG---ADGFEKAGNILPAN-YSPRE--------LRPELGAKLLLLDCMLASIKTNTNDK 530
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKA 598
IVLVSNYTQTLDLF +LCR+R Y Y+RLDGT +I KR K+V+ FN P ++F+F+LSSKA
Sbjct: 531 IVLVSNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFNSPDSSDFIFMLSSKA 590
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK FIYR L+TG+IEEK++QRQ
Sbjct: 591 GGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQRQ 650
Query: 659 MSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGA 718
K+ L + D + +DL+DLF + S+ H+ C RC N
Sbjct: 651 THKKALSTTVVDNNEDGE----RHFTRDDLKDLFKLDEGTISDTHDIFRCKRCTN----- 701
Query: 719 ESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHF 778
G +T D SD C+ DL +W H
Sbjct: 702 -----GVQTKLP--PDNSD--------------CM---------------SDLVHWYHCA 725
Query: 779 YSMSVPDAILQAS--AGDEVTFVFTNQVDGKLVPIESKVSPKMQA 821
+ +PD IL S V+FVF ++ + +V E ++QA
Sbjct: 726 NNKGIPDDILSKSWDITRCVSFVFHHRSNSAVVEQELAEQRRLQA 770
>gi|353234334|emb|CCA66360.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Piriformospora indica DSM 11827]
Length = 819
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/615 (45%), Positives = 366/615 (59%), Gaps = 62/615 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP+L + LRPHQ EGV+F++ C SG++ +GCI+AD MGLGKTLQ+I+L++T
Sbjct: 212 VPVVIDPVLSKILRPHQIEGVKFLYRCTSGMV-VENQYGCIMADGMGLGKTLQTISLIWT 270
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q GKP ++K II P+SLV NW E+ KW+G G V AL + +V+ G+
Sbjct: 271 LLKQSPHAGKPTIEKCIISCPSSLVRNWANELDKWLGKGTVGCFALDGRGKKAEVIEGVR 330
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND-----QTLTN- 339
+ +L V+I SYET R + + + E LLICDE HRLKN Q LT+
Sbjct: 331 RWVAARGRNVTLPVMICSYETLRTLAQELANCE-IGLLICDEGHRLKNGDSQTFQILTSL 389
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NP LG A FR+ +E +II GR+ AT+ K
Sbjct: 390 KVQRRVILSGTPIQNDLSEYFSLLNFANPNYLGTQAEFRKNFENTIIRGRDADATDAVKD 449
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ EL A V FI+RRTN LLS +LP K +VV C+ + LQ LY FI S +K
Sbjct: 450 ASEAKLKELGALVAPFIIRRTNELLSKYLPIKYEQVVFCRPSELQLALYRLFITSPEIKS 509
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG-TTGFEDCIRFFPPEMFSGRSG 505
+ K S+ L I LKKLCNHP+L+ PG G E+ PP G S
Sbjct: 510 LL--RGKGSQPLKAIGLLKKLCNHPELL------DLPGELAGSEE---LLPPGYGMGNST 558
Query: 506 SWTGGDGAW-----VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
GG +LSGK VL R+L H++ +T D+IVL+SNYT TLDL +LCR +
Sbjct: 559 RNLGGRERAPAMLDCQLSGKFIVLERMLHHIKTQTTDKIVLISNYTATLDLMERLCRAKG 618
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y Y RLDG ISKRQKLV+ FNDP +EF+FLLSSKAGGCG+NLIG NRL+LFDPDWNP
Sbjct: 619 YGYFRLDGQMGISKRQKLVDRFNDPEGSEFIFLLSSKAGGCGINLIGANRLILFDPDWNP 678
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF+ TG+IEEK++QRQ K+ L + E+ D T+
Sbjct: 679 AADQQALARVWRDGQKKECFVYRFVMTGSIEEKIFQRQAQKQALSSCVVDEKED---TER 735
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-----GDE------TNS 729
+F S + LR LF F + S+ H+ C RC+ DG + + GD TN
Sbjct: 736 HF-SLDMLRKLFEFTETTLSDTHDTFKCKRCK---DGVQHVKAPALLYGDASTWNHFTNG 791
Query: 730 ANKNDQSDQEVTDIG 744
KN+ D ++G
Sbjct: 792 ELKNNHDDLLRAEVG 806
>gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
Length = 847
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/616 (44%), Positives = 370/616 (60%), Gaps = 62/616 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++A GCI+AD+MGLGKTLQ + L++T
Sbjct: 240 VPVVIDPKLAKILRPHQVAGVKFLYRCTAGLIDAKA-KGCIMADEMGLGKTLQCLTLMWT 298
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q GK + K IIV P+SLV NW EI KW+G L L + S + +
Sbjct: 299 LLRQSPRGKKTIDKCIIVCPSSLVRNWANEIVKWLG-EGALTPLAVDGKSTKSSDLGTAL 357
Query: 292 DPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
+S Q VLI+SYET R + K + +E L++ DE HRLKN ++LT
Sbjct: 358 QQWASAQGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGESLTFTALNS 416
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+NDL E+FA++NF NPG LG F++ +E +I+ GR+ ATE+E+
Sbjct: 417 LRCERRVILSGTPIQNDLSEYFALLNFANPGYLGTRNEFKKNFENAILRGRDADATEKER 476
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G ++ ELS V++FI+RRTN +LS +LP K V+ L+P+Q LY+HFI+S ++K
Sbjct: 477 EKGDQKLVELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKSLYSHFINSPDMK 536
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLI--YDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
+ I Q L I LKKLC+HP L+ D I E C P + S
Sbjct: 537 KLIRGIGSQP--LKAIGLLKKLCSHPDLLDLPDDI----------EGCDHLIPDDYES-- 582
Query: 504 SGSWTGGDGAW------VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
S S GG G + S K +L R L +++ T+D+IVL+SNYTQTLDL ++CR
Sbjct: 583 SISHNGGRGGFRNSEVQTWFSVKFMILERFLHKIKKETNDKIVLISNYTQTLDLIEKMCR 642
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
++Y LRLDGT SI+KRQKLV+ FN+P +EF+FLLSSKAGGCG+NLIG NRLVL DPD
Sbjct: 643 NKKYGVLRLDGTLSINKRQKLVDKFNNPDGSEFIFLLSSKAGGCGINLIGANRLVLIDPD 702
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA+D+QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D
Sbjct: 703 WNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLQLSSCVVDEKEDVD- 761
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG----AESIGEGDET--NSAN 731
S+++LR LF F+ D + H+ +C RC+ D G A ++ GD T N N
Sbjct: 762 ---RLFSSDNLRKLFEFNPDTSCDTHDTYNCKRCKR-DKGQFIKAPAMLYGDSTTWNHLN 817
Query: 732 KNDQSDQEVTDIGGFA 747
++ E T I A
Sbjct: 818 HKALANNEDTLIANEA 833
>gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 270/599 (45%), Positives = 358/599 (59%), Gaps = 54/599 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C SGL++ GCI+AD+MGLGKTLQ IAL++T
Sbjct: 217 VPVVIDPRLAKVLRPHQVAGVKFLYRCTSGLMDPRA-KGCIMADEMGLGKTLQCIALMWT 275
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRV--QLIALCESTRD-DVVSGID 288
LL QG G + K IIV P+SLV NW EI KW+G V L +ST+ D+ +
Sbjct: 276 LLRQGPRGTKTISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQ 335
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
++ VLI+SYET R + K + +E L++ DE HRLKN +LT
Sbjct: 336 QWSVASGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTALNAL 394
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF+NPG LG FR+ +E +I+ GR+ AT++EK+
Sbjct: 395 RCERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKE 454
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+G ++ S+LS V++FI+RRTN +LS +LP K VV KL+PLQ LY HF+ S V++
Sbjct: 455 IGDQKLSDLSKLVSKFIIRRTNDILSKYLPIKYEYVVFVKLSPLQKALYKHFLTSPEVRK 514
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF--SGRS 504
+ Q L I LKKLC HP+L+ + +G ED + P+ + SGR
Sbjct: 515 LLKGAGSQP--LKAIGMLKKLCTHPELLRLPEE-----VSGSEDIL----PDDYESSGRD 563
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
W SGK +L R L +R TDD+IVL+SNYTQTLDL ++CR +RY
Sbjct: 564 KEIR----TWY--SGKFAMLERFLHQIRTETDDKIVLISNYTQTLDLIERMCRYKRYQCC 617
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+
Sbjct: 618 RLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQ 677
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S
Sbjct: 678 QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVD----RLFS 733
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRC----QNYDDGAESIGEGDETNSANKNDQSDQE 739
+ LR LF F D + H+ C RC Q A G+ N K+D + E
Sbjct: 734 ADLLRQLFQFQPDTLCDTHDTFKCPRCDPSGQRMKAPAMLYGDSTTWNHLQKDDLAKNE 792
>gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
Length = 816
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 274/612 (44%), Positives = 362/612 (59%), Gaps = 67/612 (10%)
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
+DPLL + LRPHQ EGV+F+++C +G+L +GCI+AD+MGLGKTLQ IALL+TLL Q
Sbjct: 216 IDPLLTKVLRPHQVEGVKFLYKCTTGML-VENQYGCIMADEMGLGKTLQCIALLWTLLKQ 274
Query: 236 G-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRDDVV 284
GKP ++K II P+SLV NW E+ KW+G G+ L E V
Sbjct: 275 SPHPGKPSIEKCIIACPSSLVKNWANELVKWLGKDAVTPLAIDGKGGKAELLERVGRWVA 334
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT------ 338
+ + T P V+IVSYET R + + + LL+CDE HRLKN ++LT
Sbjct: 335 ARGRNVTQP-----VMIVSYETLRTLTVHLAHCK-IGLLLCDEGHRLKNSESLTFQALNG 388
Query: 339 ---NR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
NR NDL E+F+++NF NP LG FR+ +E +II GR+ A++ K
Sbjct: 389 LDVNRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDSLASDGVK 448
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
++ EL V +FI+RRTN LLS +LP K +VV C L+ Q LY FI S +K
Sbjct: 449 AESEKKLKELGNLVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSEFQLSLYRLFIVSPEIK 508
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLI--YDTIKSGNPGTTGFEDCIRFFPPEMFS-- 501
+ T Q L I LKKLCNHP+L+ D +K G + I PE FS
Sbjct: 509 ALLRGTTSQP--LKAINILKKLCNHPELLDLPDDLK-------GCDHLI----PEGFSST 555
Query: 502 -GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
RS G + GK VL R L ++ +T D+IVL+SNYTQTLDLF +LCR ++
Sbjct: 556 AARSRGKGGKQTVRCDWGGKFLVLERFLHQIKTQTTDKIVLISNYTQTLDLFEKLCRSKK 615
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y + RLDG+ +I KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+LFDPDWNP
Sbjct: 616 YGFFRLDGSMTIVKRQKLVDQFNDPDGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNP 675
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ +K+ L + E+ D+
Sbjct: 676 AADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDAE---- 731
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD--GAESIGEGDE------TNSANK 732
S + LR LFTF+++ E HE C RC++ A ++ GD TN+ K
Sbjct: 732 RHFSIDALRQLFTFNENTLCETHETFKCKRCKDGKQIVKAPALLYGDASTWNHFTNAELK 791
Query: 733 NDQSDQEVTDIG 744
N+ D ++G
Sbjct: 792 NNHDDLLRAEVG 803
>gi|258568006|ref|XP_002584747.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii
1704]
gi|237906193|gb|EEP80594.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii
1704]
Length = 1534
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/579 (44%), Positives = 342/579 (59%), Gaps = 66/579 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ HGCI+AD+MGLGKT
Sbjct: 76 VPVVIDPKLAKVLRPHQVEGVKFLYRCTTGLVDPNA-HGCIMADEMGLGKT--------- 125
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRD 281
GK ++K +I P +LV NW E+ KW+G G+ L R
Sbjct: 126 ---SAEAGKSTLQKVVIACPATLVGNWANELVKWLGKDAIHPFVIDGKASKAELTLQLRQ 182
Query: 282 DVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLTN 339
++ P VLIVSYET R++ + + LL+CDE HRLKN QT T
Sbjct: 183 WAIASGRQVVRP-----VLIVSYETLRLNVGELA-ETPIGLLLCDEGHRLKNGDSQTFTA 236
Query: 340 -----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATE 382
+NDL E+++++NFTNPG+LG + F + +E I+ GR+ TE
Sbjct: 237 LNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGLLGSRSEFHKRFEMPILRGRDADGTE 296
Query: 383 EEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK 442
EE+K G E +EL VN+FI+RR+N +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 297 EERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQVDLYNHFIQSP 356
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
++K + K S+ L I LKKLCNHP L+ + + PG C +FFP +
Sbjct: 357 DIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSADLPG------CEQFFPDDFVPP 406
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 407 EGRGRDRDVKSWY--SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRGYG 464
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LRLDGT ++ KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NL+G NRLVLFDPDWNPA
Sbjct: 465 SLRLDGTMNVKKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAA 524
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 525 DQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCV----VDSAEDVERH 580
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S LR+LF F S+ H+ C RC+ DG + I
Sbjct: 581 FSLGSLRELFQFKPQTTSDTHDTFKCKRCR--PDGTQFI 617
>gi|384485625|gb|EIE77805.1| hypothetical protein RO3G_02509 [Rhizopus delemar RA 99-880]
Length = 752
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/561 (45%), Positives = 342/561 (60%), Gaps = 48/561 (8%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ VDP+L R LRPHQ EGV+F+++C +G ++ GCI+AD+MGLGKTLQ IAL++TLL
Sbjct: 198 VVVDPVLGRVLRPHQVEGVKFLYQCTTGKVHPDAA-GCIMADEMGLGKTLQCIALVWTLL 256
Query: 234 CQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFT 291
Q GKP + KAI+ P+SLV NW E KW+G RV+ + + + V+ + +
Sbjct: 257 QQSEAIGKPTINKAIVTCPSSLVKNWANEFVKWLGENRVRPLVVDSGGTKEKVAAVKRWG 316
Query: 292 DPCSSL--QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TN 339
+ +LI+SYE+ R +S K+ +L+CDE HRLKN ++L T
Sbjct: 317 AAQGQIVNPILIISYESLRTYS-KYLRKSPIGMLLCDEGHRLKNSESLLFQELNSLPVTK 375
Query: 340 R---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIE 390
R NDL E++++++F NPG+LG + FRR YE I+ GR+ A+E+E+++ E
Sbjct: 376 RVILSGTPIQNDLSEYYSLLDFANPGLLGTPSEFRRNYENPILRGRDADASEKERQVSDE 435
Query: 391 RSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
+ +E V++F +RRTN +LS +LP K VV CKL PLQ LYN F+ S +K +
Sbjct: 436 KVAEFWKIVSRFTIRRTNDILSKYLPTKYEHVVFCKLAPLQEALYNVFLTSPEIKTLLRG 495
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ Q L IT LKKLCNHP L+ E C PP ++
Sbjct: 496 QGSQP--LKAITLLKKLCNHPSLLN--------LPNDLEGCESVLPP--------NYHNS 537
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
+ SGK V+AR+L +++ T D+IVL+SNYTQTLDLF C+E++Y LRLDG+
Sbjct: 538 NKIEQSFSGKFAVMARMLAKIKKETKDKIVLISNYTQTLDLFEAYCQEQQYGVLRLDGSM 597
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
+I KRQKLV+ FNDP EFVFLLSSKAGGCGLNLIG NRLVLFDPDWNPA D+QA ARV
Sbjct: 598 TIPKRQKLVDRFNDPEGGEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARV 657
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
WRDGQKK +IYRF++ GTIEEK++QRQ K+ L + E A S D+R
Sbjct: 658 WRDGQKKDCYIYRFIAAGTIEEKIFQRQSHKQSLSNCVVDE-----ADMERHFSLADMRQ 712
Query: 691 LFTFHDDVRSEIHENMHCTRC 711
LF ++ E H+ C RC
Sbjct: 713 LFQYNSKSECETHDTFKCKRC 733
>gi|344302287|gb|EGW32592.1| hypothetical protein SPAPADRAFT_51134 [Spathaspora passalidarum
NRRL Y-27907]
Length = 831
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/567 (46%), Positives = 353/567 (62%), Gaps = 46/567 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++ GCI+AD+MGLGKTLQ +AL++T
Sbjct: 228 VPVVIDPKLAKILRPHQVAGVKFLYRCTAGLIDPRA-KGCIMADEMGLGKTLQCLALMWT 286
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTR-DDVVSGID 288
LL Q GK ++K IIV P+SLV NW EI KW+G G + +A+ +ST+ +D+ +
Sbjct: 287 LLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNDLGLALQ 346
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
++ VLIVSYET R + K + +E L++ DE HRLKN +LT
Sbjct: 347 QWSTATGRNVVRPVLIVSYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTALNSL 405
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG LG F+R +E I+ GR+ AT++E+
Sbjct: 406 KCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKRNFENVILRGRDADATDKERA 465
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
E+ +ELS V++FI+RRTN +LS +LP K V+ L+P+QS LYN+FI S +K+
Sbjct: 466 KSDEKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQSALYNYFITSPEIKK 525
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIY--DTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ Q L I LKKLCNHP L+ D I+ G E+ I PE +S
Sbjct: 526 LLRGTGSQP--LKAIGLLKKLCNHPDLLNLPDDIE-------GCEELI----PEDYSSSI 572
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
G+ SGK +L R L + T+D+IVL+SNYTQTLDL ++CR ++Y L
Sbjct: 573 GASGRNREIQTWFSGKFMILERFLHQINTETNDKIVLISNYTQTLDLIEKMCRYKKYGVL 632
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDGT +I+KRQKLV+ FNDP +EF+FLLSSKAGGCG+NLIG NRLVL DPDWNPA+D+
Sbjct: 633 RLDGTMNINKRQKLVDKFNDPDGSEFIFLLSSKAGGCGINLIGANRLVLIDPDWNPASDQ 692
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S
Sbjct: 693 QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVE----RLFS 748
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRC 711
++LR LF + D + H+ HC RC
Sbjct: 749 ADNLRQLFLYAPDTICDTHDTFHCKRC 775
>gi|241640781|ref|XP_002410926.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503624|gb|EEC13118.1| conserved hypothetical protein [Ixodes scapularis]
Length = 654
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/590 (43%), Positives = 349/590 (59%), Gaps = 72/590 (12%)
Query: 154 DPLVLWQP-----EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
+ LVL+ P E + LV + VDP+L + LRPHQREGV+FM++CV+G G
Sbjct: 49 NALVLYAPPPLSNHEQISTTSRLVHVVVDPVLTQVLRPHQREGVKFMWDCVTGK-QIEGS 107
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
+GCI+AD+MGLGKTLQ I LL+TLL Q + P + KA+IVTP+SLV NW E+ KW+G
Sbjct: 108 YGCIMADEMGLGKTLQCITLLWTLLRQSPEFATPTITKAVIVTPSSLVKNWHNELSKWLG 167
Query: 268 GRVQLIALCESTRDDVVSGIDSFTDP-----CSSLQVLIVSYETFRMHSSKFSCSESCDL 322
RV+ +A+ ++ ++ + I F C+ VLI+SYETFR+H++ E
Sbjct: 168 DRVRSVAIESGSKTEIDAHIRGFMAAFGRRVCTP--VLILSYETFRLHANALQSGE-VGC 224
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+ICDE HRLKN + T +NDL E+F++++F N GILG A
Sbjct: 225 VICDEGHRLKNCENQTYHALNGLRTKRRILLSGTPIQNDLLEYFSLIHFVNAGILGTAQE 284
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F+R +E I+ R+ +++ E+ G ER EL VN+ ++RRTNALLS +LP K +V
Sbjct: 285 FKRKFELPILKSRDSCSSDAERARGQERLEELITIVNRCLIRRTNALLSRYLPVKTEHIV 344
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
CC +TP+Q E Y+ + LA IT LKKLCNHP L+ +
Sbjct: 345 CCAMTPIQREWYDRL-----------ASMRGGTPLATITLLKKLCNHPSLVREC------ 387
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
FP SG ELSGK+ VL LL +R TDD++VL+S
Sbjct: 388 -----------FPD------SGPTFKASTVMPELSGKLKVLDCLLAIIRSTTDDKVVLIS 430
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
NYTQTLD+F +LCRER Y + RLDG+ +I KR K+V FN PS EF F+LSSKAGGCGL
Sbjct: 431 NYTQTLDVFERLCRERGYGFFRLDGSMTIKKRAKIVAAFNVPSSPEFAFMLSSKAGGCGL 490
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NLIG NRLV+FDPDWNPAND QA AR+WRDGQKK ++YR +S+G+IEEK+ QRQ K+
Sbjct: 491 NLIGANRLVMFDPDWNPANDAQAMARIWRDGQKKPCYVYRLVSSGSIEEKILQRQTHKKA 550
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
L + + D + + ST LF +++ HE++ C RC N
Sbjct: 551 LSSCVVDSEEDCESLE----STTQTTHLFCISNELALSTHESLSCRRCVN 596
>gi|149035611|gb|EDL90292.1| rCG50332, isoform CRA_c [Rattus norvegicus]
Length = 568
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/525 (47%), Positives = 338/525 (64%), Gaps = 43/525 (8%)
Query: 213 LADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQL 272
+AD+MGLGKTLQ I L++TLL Q + KP ++KA++V+P+SLV NW E++KW+GGR+Q
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQP 60
Query: 273 IALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+A+ ++D++ ++ F + + +LI+SYETFR+H + L+ICDE H
Sbjct: 61 LAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVEVLK-KGNVGLVICDEGH 119
Query: 330 RLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN + T + NDL E+F++V+F N GILG A F++++E
Sbjct: 120 RLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFEL 179
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ R+ A+E +++LG ER EL + VN+ ++RRT+ +LS +LP KI +VVCC+LTPL
Sbjct: 180 PILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 239
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q+ELY F+ + + E L+ IT+LKKLCNHP LIYD + GFE
Sbjct: 240 QTELYKRFLRQAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEE---DGFEG 296
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
+ FPP G + VE LSGKM VL +L R R+ D++VLVSNYTQT
Sbjct: 297 TLGIFPP-----------GYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQT 345
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
LDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG
Sbjct: 346 LDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGA 405
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L +
Sbjct: 406 NRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCV 465
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
E+ D S +L++LFT + S+ H+ +HC RC N
Sbjct: 466 VDEEQDVE----RHFSLGELKELFTLDEASLSDTHDRLHCRRCVN 506
>gi|413939026|gb|AFW73577.1| hypothetical protein ZEAMMB73_198499 [Zea mays]
Length = 392
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/405 (61%), Positives = 292/405 (72%), Gaps = 23/405 (5%)
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
WVELSGKMHVLARLLGHLRQ+TDDRIVLVSNYTQTLDLF QLCRERRYPY+RLDG+TSI+
Sbjct: 2 WVELSGKMHVLARLLGHLRQKTDDRIVLVSNYTQTLDLFVQLCRERRYPYVRLDGSTSIN 61
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
KRQKLVN FND S++EFVFLLSSKAGGCGLNL+GGNRLVLFDPDWNPANDKQAAARVWRD
Sbjct: 62 KRQKLVNQFNDLSRDEFVFLLSSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAARVWRD 121
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
GQKKRV+IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ D+ QGN LSTEDLRDLF
Sbjct: 122 GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADNK-MQGNSLSTEDLRDLFI 180
Query: 694 FHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCL 753
FH+ VRSEIH+N+ C+RC D A G G + Q+ DIGGF ++GCL
Sbjct: 181 FHEHVRSEIHKNLKCSRCDKDGDPALD-GTGFAATGHKASIPGVQDYADIGGFGEISGCL 239
Query: 754 HKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIES 813
K+ S+ +Q+G P EEDL +WGHH +VPD ILQ SAG+EV+FVFTNQVDGKLVP+ES
Sbjct: 240 QKMNSTHQQIGRPTEEDLGSWGHHCDPSTVPDTILQCSAGEEVSFVFTNQVDGKLVPVES 299
Query: 814 KVSPKMQ-----ATEGNKN---PNNHITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKF 865
V A G K PN+ K L+ ++ + H L+NS
Sbjct: 300 MVRSAAHQQNGIAATGEKGVQIPNSPSKPGKQSLNGKNLKMGFH---------LKNS--- 347
Query: 866 SLSASSQPKSMRTSLKGAIKPKLSFGNQLPLKRFSPDNVEHDDDF 910
SL S++ + L+G +K F +Q +K+ + DDDF
Sbjct: 348 SLKCSTKSRPSPNCLQGLMKTS-PFLDQPQIKKLHVASDISDDDF 391
>gi|119194699|ref|XP_001247953.1| hypothetical protein CIMG_01724 [Coccidioides immitis RS]
Length = 846
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/579 (44%), Positives = 342/579 (59%), Gaps = 66/579 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ +GCI+AD+MGLGKT
Sbjct: 192 VPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNA-NGCIMADEMGLGKTSPEA----- 245
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRD 281
GKP V+K +I P +LV NW E+ KW+G G+ L R
Sbjct: 246 -------GKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQ 298
Query: 282 DVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLTN 339
++ P VLIVSYET R++ + LL+CDE HRLKN QT T
Sbjct: 299 WAIASGRQVVRP-----VLIVSYETLRLNVGELK-ETPIGLLLCDEGHRLKNGESQTFTA 352
Query: 340 -----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATE 382
+NDL E+++++NFTNPG+LG + F + +E I+ GR+ TE
Sbjct: 353 LNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDADGTE 412
Query: 383 EEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK 442
EE+K G E +EL VN+FI+RR+N +LS +LP K VV C L P Q +LYNHFI S
Sbjct: 413 EERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQSP 472
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
++K + K S+ L I LKKLCNHP L+ + + PG+ +FFP +
Sbjct: 473 DIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--NLSADLPGSE------QFFPDDYVPP 522
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y
Sbjct: 523 EGRGRDRDVKSW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYG 580
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LRLDGT ++ KRQKLV+ FNDP EFVFLLSSKAGGCG+NL+G NRLVLFDPDWNPA
Sbjct: 581 SLRLDGTMTVKKRQKLVDRFNDPDGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAA 640
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 641 DQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCV----VDSAEDVERH 696
Query: 683 LSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 697 FSLDSLRELFQFKPGTTSDTHDTFKCRRCR--PDGTQFI 733
>gi|389748911|gb|EIM90088.1| SNF2 family domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 825
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 274/625 (43%), Positives = 366/625 (58%), Gaps = 77/625 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G++ G +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 213 VPVVIDPRLCKVLRPHQVEGVKFLYRCTTGMV-VEGQYGCIMADEMGLGKTLQCIALLWT 271
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-------------GRVQLIALCE 277
LL Q GK ++K II P+SLV NW E+ KW+G G+ +L+ E
Sbjct: 272 LLKQSPRSGKGTLEKCIIACPSSLVKNWANELAKWLGKDTITPMAVDGKGGKAELLQRVE 331
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
V + + T P V+IVSYET R + + + LL+CDE HRLKN ++L
Sbjct: 332 RW---VAASGRNVTQP-----VMIVSYETLRTLTVYLNGCQ-IGLLLCDEGHRLKNSESL 382
Query: 338 TNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T + NDL E+F+++NF NP +LG FR+ +E II GR+
Sbjct: 383 TFQALDAINVKRRVILSGTPIQNDLSEYFSLLNFANPNLLGTKNDFRKNFENIIIRGRDA 442
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
AT+++K ++ EL V++FI+RRTN LLS +LP K +VV C L+ Q +LY F
Sbjct: 443 DATDKDKAECEKKLKELGELVSKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLQLYRLF 502
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S +K + +S+ L I LKKLCNHP+L+ + G + I PE
Sbjct: 503 ISSPEIKALL--RGAESQPLKAINILKKLCNHPELL-----NLPQDLRGCDHLI----PE 551
Query: 499 MFSG--------RSGSWTG---GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
F G + GS G G E SGK VL R L L T+D+IVL+SNYTQ
Sbjct: 552 GFCGAGDDSNKPKGGSRGGRDAGQNVHTEWSGKFIVLERFLHRLHTETNDKIVLISNYTQ 611
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
TLD+F ++ R ++Y Y RLDGT +I KRQKLV+ FN+P EFVFLLSSKAGGCG+NLIG
Sbjct: 612 TLDIFEKMLRSKKYGYFRLDGTMNIPKRQKLVDQFNNPEGKEFVFLLSSKAGGCGINLIG 671
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
NRL+LFDPDWNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ SK+ L
Sbjct: 672 ANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSSA 731
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD--GAESIGEGD 725
+ E+ D+ S + LR LF F++ E HE C RC+N A ++ GD
Sbjct: 732 VVDEKEDAE----RHFSIDSLRQLFLFNEKTLCETHETFKCKRCKNGKQMVKAPALLYGD 787
Query: 726 E------TNSANKNDQSDQEVTDIG 744
TN+ KN+ D ++G
Sbjct: 788 ASTWNHFTNAELKNNHDDLLRAEVG 812
>gi|344231402|gb|EGV63284.1| hypothetical protein CANTEDRAFT_106747 [Candida tenuis ATCC 10573]
Length = 817
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 269/606 (44%), Positives = 358/606 (59%), Gaps = 66/606 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C SGL++ GCI+AD+MGLGKTLQ IAL++T
Sbjct: 222 VPVVIDPRLAKILRPHQVEGVKFLYRCTSGLIDPKA-KGCIMADEMGLGKTLQCIALMWT 280
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL----------CESTR 280
LL Q G+ + K IIV P+SLV NW EI KW+G G + +A+ +S +
Sbjct: 281 LLKQSPRGRKTISKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSVKNSEIGDSLK 340
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
V+ + P VLI+SYET R H K S +E L++ DE HRLKN +LT
Sbjct: 341 QWSVASGRNVVRP-----VLIISYETLRRHVDKLSGTE-VGLMLADEGHRLKNGDSLTFN 394
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F+++NF+NP LG FRR YE I+ GR+ A+
Sbjct: 395 ALNELRCERRVILSGTPIQNDLSEYFSLLNFSNPNYLGTRNDFRRNYENDILRGRDADAS 454
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
++E++ G ++ +EL+ V++FI+RRTN +LS +LP K V+ L+PLQ++LYN FI S
Sbjct: 455 DKERESGDKKLNELTTLVSRFIIRRTNDILSKYLPIKYEHVIFVNLSPLQTKLYNFFITS 514
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K+ + Q L I LKKLCNHP L+ + C P +
Sbjct: 515 PEIKKLLKGHGSQP--LKAIGLLKKLCNHPNLLN--------LPEDLDGCQELMPDDYDY 564
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ T W LSGK +L R L L T D+IVL+SNYTQTLDL ++CR +RY
Sbjct: 565 KKREVQT-----W--LSGKFSILERFLYKLHHETGDKIVLISNYTQTLDLIERMCRVKRY 617
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRLVL DPDWNPA
Sbjct: 618 GNLRLDGTMNINKRQKLVDRFNDPDGKEFIFLLSSKAGGCGINLIGANRLVLIDPDWNPA 677
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D
Sbjct: 678 ADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKVDVE----R 733
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG-----AESIGEGDETNSANKNDQS 736
S ++L+ LF F + + H+ C RCQ DG A ++ GD T + N +
Sbjct: 734 LFSADNLKQLFQFESNTVCDTHDTYGCKRCQ---DGVQLTNAPAMLYGDATTWNHLNHEK 790
Query: 737 DQEVTD 742
+E D
Sbjct: 791 LKENHD 796
>gi|331227507|ref|XP_003326422.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 939
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/567 (45%), Positives = 351/567 (61%), Gaps = 45/567 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G++ G GCI+AD+MGLGKTLQ I LL+T
Sbjct: 341 VPVVLDPRLSKTLRPHQVEGVKFLYRCATGMVEQ-GAKGCIMADEMGLGKTLQCITLLWT 399
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q GKP ++KAI+ P+SLV NW E KW+G G + +A+ + T+ ++++ +
Sbjct: 400 LLKQSPIAGKPSIEKAIVACPSSLVKNWANEFDKWLGPGAINPLAVDGKQTKANLLTSVR 459
Query: 289 SFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLTN---- 339
+ V+IVSYET R + LL+CDE HRLKN +QT
Sbjct: 460 QWVSATGRRVPQPVMIVSYETLRGTLVEELGRTPVGLLLCDEGHRLKNADNQTYAALNGI 519
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+FA++NF NP LGD A FR+ YE I+ GR+ ++E E
Sbjct: 520 NCERRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKSYELPILRGRDSDSSESEVA 579
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
L + EL+ KV +FI+RRTN LLS +LP K VV C + Q +LY HFI S ++++
Sbjct: 580 LAEAKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSAFQLDLYRHFIDSPDLQK 639
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ Q L + L+KLCNHP L+ ++ PG+ ++FP S +
Sbjct: 640 LLRGVGCQP--LKMLGILRKLCNHPDLL--DLQQDIPGSE------KYFPDGYRSKDPRA 689
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
A ELSGKM VL R L ++ T D+IVL+SN+TQTLD+ ++CRERR+ LRL
Sbjct: 690 -----PARPELSGKMTVLERFLHKIKTETTDKIVLISNFTQTLDVMEKMCRERRWGNLRL 744
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+LFDPDWNPA+D+QA
Sbjct: 745 DGTMQITKRQKLVDRFNDPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQA 804
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF+ TG++EEKV+QRQ K L + EQ D + S E
Sbjct: 805 LARVWRDGQKKNCFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQED----EARMFSRE 860
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQN 713
L++LF +++ +S+ H+ C RC++
Sbjct: 861 SLKELFRLNENTQSDTHDVYKCKRCRD 887
>gi|119627334|gb|EAX06929.1| RAD54-like (S. cerevisiae), isoform CRA_a [Homo sapiens]
Length = 567
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/523 (47%), Positives = 332/523 (63%), Gaps = 39/523 (7%)
Query: 213 LADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQL 272
+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+GGR+Q
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP 60
Query: 273 IALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+A+ ++D++ ++ F + S +LI+SYETFR+H S L+ICDE H
Sbjct: 61 LAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQ-KGSVGLVICDEGH 119
Query: 330 RLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN + T + NDL E+F++V+F N GILG A F++++E
Sbjct: 120 RLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFEL 179
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVCC+LTPL
Sbjct: 180 PILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 239
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q+ELY F+ + E L+ IT+LKKLCNHP LIYD G G D
Sbjct: 240 QTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFVGALD 299
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
FPP S +LSGKM VL +L R R+ D++VLVSNYTQTLD
Sbjct: 300 ---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLD 347
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
LF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGGCGLNLIG NR
Sbjct: 348 LFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANR 407
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
LV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L +
Sbjct: 408 LVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 467
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
E+ D S +L++LF + S+ H+ +HC RC N
Sbjct: 468 EEQDVE----RHFSLGELKELFILDEASLSDTHDRLHCRRCVN 506
>gi|403417896|emb|CCM04596.1| predicted protein [Fibroporia radiculosa]
Length = 815
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/617 (43%), Positives = 364/617 (58%), Gaps = 69/617 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L + LRPHQ EGV+F+++C +G++ +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 211 VAVVIDPRLCKVLRPHQIEGVKFLYKCTTGMI-VENQYGCIMADEMGLGKTLQCIALLWT 269
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-------------GRVQLIALCE 277
L+ Q GKP ++K II P+SLV NW E+ KW+G G+ +++A
Sbjct: 270 LVKQSPHAGKPTIEKCIIACPSSLVKNWANELVKWLGKDTVSALAIDGKGGKAEMLARVA 329
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
V +G + + P V+IVSYET R ++ + + S LL+CDE HRLKN ++L
Sbjct: 330 RW---VAAGGRNVSQP-----VMIVSYETLRSLTAHLA-NCSIGLLLCDEGHRLKNSESL 380
Query: 338 TNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T + NDL E+F+++NF NP LG FR+ +E +II GR+
Sbjct: 381 TFQALNGLNVRRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDA 440
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
A+++ K ++ EL V +FI+RRTN LLS +LP K +VV C L+P Q LY F
Sbjct: 441 DASDQTKAECEKKLKELGGLVAKFIIRRTNDLLSKYLPVKYEQVVFCGLSPFQLSLYRLF 500
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++ + Q L I LKKLCNHP+L+ + + G+ + PE
Sbjct: 501 ISSPEIQALLRGADSQP--LKAINILKKLCNHPELL--DLPNDLRGSEKLQ-------PE 549
Query: 499 MFSGRSGSWTG---GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
FSG GS + SGK VL R L + T+D+IVL+SNYTQTLDLF +L
Sbjct: 550 DFSGAGGSSRDKGRNQTVRCDYSGKFMVLERFLHRIHTETNDKIVLISNYTQTLDLFEKL 609
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
R ++Y Y RLDG+ +I+KRQKLV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRL+LFD
Sbjct: 610 LRSKKYGYFRLDGSMTINKRQKLVDQFNDPNGKEFVFLLSSKAGGCGINLIGANRLILFD 669
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D+QA ARVWRDGQKK F+YRF+ TGTIEEK++QRQ SK+ L + E D+
Sbjct: 670 PDWNPAADQQALARVWRDGQKKECFVYRFICTGTIEEKIFQRQASKQALSSAVVDEMEDA 729
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD--GAESIGEGDE------T 727
S + LR LF F++ E HE C RC++ A+++ GD T
Sbjct: 730 E----RHFSLDSLRKLFLFNEKTLCETHETFKCKRCKDGKQIMKAQALLYGDASTWNHFT 785
Query: 728 NSANKNDQSDQEVTDIG 744
N KN+ D ++G
Sbjct: 786 NMELKNNHDDLLRAEVG 802
>gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 875
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 271/605 (44%), Positives = 361/605 (59%), Gaps = 55/605 (9%)
Query: 157 VLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADD 216
++ PEE N VP+ +DP L + LRPHQ GV+F++ C +GL + GCI+AD+
Sbjct: 256 IVTNPEEQMRKFPN-VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLQDPRA-KGCIMADE 313
Query: 217 MGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC 276
MGLGKTLQ + L++TLL Q GK ++K IIV P+SLV NW EI KW+G V L L
Sbjct: 314 MGLGKTLQCLTLMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGV-LTPLA 372
Query: 277 ESTRDDVVSGIDSFTDPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ + + S+ Q VLI+SYET R + K + +E L++ DE H
Sbjct: 373 VDGKSTKSNDLGLALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGH 431
Query: 330 RLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN +LT +NDL E+F+++NF NPG LG FRR +E
Sbjct: 432 RLKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRRNFEN 491
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
+I+ GR+ AT++E++ G ++ SELS V++FI+RRTN +LS +LP K V+ L P+
Sbjct: 492 AILRGRDADATDKEREKGDQKLSELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLAPM 551
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY--DTIKSGNPGTTGF 488
Q +LY+HFI S +K+ + Q L I LKKLCNHP L+ D I
Sbjct: 552 QKKLYHHFITSPEIKKLLKGIGSQP--LKAIGMLKKLCNHPDLLNLPDDI---------- 599
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
E C P + S G GG ++ SGK VL R L +++ T+D+IVL+SNYT
Sbjct: 600 EGCDDLIPEDYVSSIHGHGGGGRNREIQTWFSGKFQVLERFLHKIKRETNDKIVLISNYT 659
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
QTLDL ++CR ++Y LRLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLI
Sbjct: 660 QTLDLIEKMCRYKKYGALRLDGTMNINKRQKLVDRFNDPDGAEFIFLLSSKAGGCGINLI 719
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G NRLVL DPDWNPA+D+QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L
Sbjct: 720 GANRLVLIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSS 779
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG----AESIG 722
+ E+ D S ++LR LF F D + H+ +C RC D G A ++
Sbjct: 780 CVVDEKEDVE----RLFSADNLRQLFLFQPDTECDTHDTYNCKRCHK-DKGQTIKAPAML 834
Query: 723 EGDET 727
GD T
Sbjct: 835 YGDAT 839
>gi|448122424|ref|XP_004204446.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358349985|emb|CCE73264.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 262/583 (44%), Positives = 353/583 (60%), Gaps = 44/583 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++ GCI+AD+MGLGKTLQ + L++T
Sbjct: 235 VPVVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKA-KGCIMADEMGLGKTLQCLTLMWT 293
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRD-DVVSGID 288
LL Q GK ++K IIV P+SLV NW EI KW+G G + +A+ +ST+ D+ + +
Sbjct: 294 LLKQSPRGKKTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSTKSSDLSAALQ 353
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ VLI+SYET R + K + + L++ DE HRLKN +LT
Sbjct: 354 QWAVASGRNIVRPVLIISYETLRRNVDKLAGTH-VGLMLADEGHRLKNSDSLTFTTLNSL 412
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG LG FR+ +E I+ GR+ ATE+EK
Sbjct: 413 RCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRKNFENDILRGRDADATEDEKN 472
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G ++ +EL+ V++FI+RRTN +L+ +LP K VV L+ +Q ELY HFI S +K+
Sbjct: 473 KGDKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVGLSDMQKELYRHFITSPEIKK 532
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ Q L I LKKLCNHP L+ PG E R+ P E + SG
Sbjct: 533 LLRGVGSQP--LKAIGILKKLCNHPDLL------SLPG--DIEGSERYIP-EDYIPVSGG 581
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK +L R L LR T+D+IVL+SNYTQTLDL ++CR +RY LRL
Sbjct: 582 HGRNKEVQTWFSGKFSILERFLYKLRVETNDKIVLISNYTQTLDLIEKMCRTKRYGSLRL 641
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +I+KRQKLV+ FNDP +EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA
Sbjct: 642 DGTMNINKRQKLVDRFNDPEGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPAADQQA 701
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S +
Sbjct: 702 LARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVE----RLFSAD 757
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRC--QNYDDGAESIGEGDET 727
+L+ LF F + H+ HC RC + D + ++ GD T
Sbjct: 758 NLKQLFEFQPETNCNTHDTYHCKRCSPEKQIDKSPAMLYGDST 800
>gi|448124749|ref|XP_004205004.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358249637|emb|CCE72703.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 261/566 (46%), Positives = 343/566 (60%), Gaps = 44/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++ GCI+AD+MGLGKTLQ + L++T
Sbjct: 235 VPVVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKA-KGCIMADEMGLGKTLQCLTLMWT 293
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGIDS 289
LL Q GK ++K IIV P+SLV NW EI KW+G G + +A+ +ST+ +SG
Sbjct: 294 LLKQSPRGKKTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKSTKSSDLSGALQ 353
Query: 290 FTDPCSSLQ----VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
S VLI+SYET R + K + + L++ DE HRLKN +LT
Sbjct: 354 QWAVASGRNIVRPVLIISYETLRRNVDKLAGTH-VGLMLADEGHRLKNSDSLTFTALNSL 412
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG LG FR+ +E I+ GR+ ATE+EK
Sbjct: 413 RCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRKNFENDILRGRDADATEDEKN 472
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G ++ +EL+ V++FI+RRTN +L+ +LP K VV L+ +Q ELY HFI S +K+
Sbjct: 473 KGDKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVGLSDMQKELYRHFITSPEIKK 532
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG-TTGFEDCIRFFPPEMFSGRSG 505
+ Q L I LKKLCNHP L+ PG G E I PE + SG
Sbjct: 533 LLRGVGSQP--LKAIGMLKKLCNHPDLL------SLPGDIEGSEKYI----PEDYIPVSG 580
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
SGK +L R L LR T+D+IVL+SNYTQTLDL ++CR +RY LR
Sbjct: 581 GHGRNKEVQTWFSGKFSILERFLYKLRVETNDKIVLISNYTQTLDLIEKMCRTKRYGSLR 640
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+Q
Sbjct: 641 LDGTMNINKRQKLVDRFNDPEGPEFIFLLSSKAGGCGINLIGANRLILIDPDWNPAADQQ 700
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S
Sbjct: 701 ALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVE----RLFSA 756
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRC 711
++L+ LF F + H+ HC RC
Sbjct: 757 DNLKQLFEFQPETNCNTHDTYHCKRC 782
>gi|407860358|gb|EKG07368.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1044
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 278/704 (39%), Positives = 396/704 (56%), Gaps = 81/704 (11%)
Query: 135 PRTVENNVIEENFTLPPGVDP-----LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQ 188
P+T + + E L P DP +VL++ + ++ G L V + VDP++ LRPHQ
Sbjct: 310 PKTGPSGIRAE---LKPLHDPDREGAVVLFRADYKRDANGRLQVSVVVDPIIGDKLRPHQ 366
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAII 248
R GVQF+F+C++G G HG ILAD+MGLGKT+Q++A +YT L QG G P +K ++
Sbjct: 367 RAGVQFLFDCITGE-RMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGVPTARKCLV 425
Query: 249 VTPTSLVSNWEAEIKKWVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYE 305
VTP+SLV NW E KW+G G V+ ++ EST D ++S D D VL++SY+
Sbjct: 426 VTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGD------VLVISYD 479
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
R + ++ S S +L++CDE HRLKN + T + NDL EF
Sbjct: 480 QLRKYITRISTLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEF 539
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
AMV F NPGILG F R +E ++ GR+P E + LG +R+ LS +FILRR
Sbjct: 540 HAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRR 599
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T ++ ++LPPK+ V +L LQS Y K + E+ L I+AL+K
Sbjct: 600 TQSINESYLPPKVDVTVFVRLGELQSVAYE--------KLSDLVESSSCPPLVLISALRK 651
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
LCNH L Y+ + + + G R P + S T + A GKMH ++
Sbjct: 652 LCNHMDLFYEAVLNSSKEEVGEG---RGIPKSVLPKGYKSGTLSEAA----GGKMHFVSL 704
Query: 527 LLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP 585
+L LR D D++V+VSN+TQTLD+ A +CR++R + +LDG+ + +RQ++V+ FN P
Sbjct: 705 MLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVP 764
Query: 586 SKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFL 645
E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRVFIYR L
Sbjct: 765 ESQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLL 824
Query: 646 STGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHEN 705
S G+IEEK+YQRQ+SK+GL + ++DS + E+LR LF + D RS+ H+
Sbjct: 825 SAGSIEEKIYQRQVSKQGLSANVVDMKSDSK----QHFTLEELRSLFCYRKDTRSDTHDL 880
Query: 706 MHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGT 765
+HCT C E++ E ++S+ + L+ + + EK+ G
Sbjct: 881 LHCTNC-------EAVVELLASSSSGAGKAKE-----------LSAPMKFRRVGEKKSG- 921
Query: 766 PLEEDLNNWGHHFYSMSVP-DAILQA---SAGDEVTFVFTNQVD 805
P ++L W H P D +++A A +F+F ++ D
Sbjct: 922 PRMDELRGWRHFARCEEFPLDKVVRAISSKAPGLCSFIFADERD 965
>gi|146413212|ref|XP_001482577.1| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 269/599 (44%), Positives = 359/599 (59%), Gaps = 54/599 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C SGL++ GCI+AD+MGLGKTLQ IAL++T
Sbjct: 217 VPVVIDPRLAKVLRPHQVAGVKFLYRCTSGLMDPRA-KGCIMADEMGLGKTLQCIALMWT 275
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRD-DVVSGID 288
LL QG G + K IIV P+SLV NW EI KW+G G + +A+ +ST+ D+ +
Sbjct: 276 LLRQGPRGTKTISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQ 335
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
++ VLI+SYET R + K + +E L++ DE HRLKN +LT
Sbjct: 336 QWSVASGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTALNAL 394
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF+NPG LG FR+ +E +I+ GR+ AT++EK+
Sbjct: 395 RCERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKE 454
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+G ++ S+LS V++FI+RRTN +LS +LP K VV KL+PLQ LY HF+ S V++
Sbjct: 455 IGDQKLSDLSKLVSKFIIRRTNDILSKYLPIKYEYVVFVKLSPLQKALYKHFLTSPEVRK 514
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF--SGRS 504
+ Q L I LKKLC HP+L+ + G ED + P+ + SGR
Sbjct: 515 LLKGAGSQP--LKAIGMLKKLCTHPELLRLPEE-----VLGSEDIL----PDDYESSGRD 563
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
W SGK +L R L +R TDD+IVL+SNYTQTLDL ++CR +RY
Sbjct: 564 KEIR----TWY--SGKFAMLERFLHQIRTETDDKIVLISNYTQTLDLIERMCRYKRYQCC 617
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+
Sbjct: 618 RLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQ 677
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQKK FIYRF+ TGTIEEK++QRQ K L + E+ D S
Sbjct: 678 QALARVWRDGQKKDCFIYRFILTGTIEEKIFQRQSMKLSLSSCVVDEKEDVD----RLFS 733
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRC----QNYDDGAESIGEGDETNSANKNDQSDQE 739
+ LR LF F D + H+ C RC Q A G+ N K+D + E
Sbjct: 734 ADLLRQLFQFQPDTLCDTHDTFKCPRCDPSGQRMKAPAMLYGDSTTWNHLQKDDLAKNE 792
>gi|336364885|gb|EGN93238.1| hypothetical protein SERLA73DRAFT_172150 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377463|gb|EGO18625.1| hypothetical protein SERLADRAFT_454200 [Serpula lacrymans var.
lacrymans S7.9]
Length = 817
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/619 (44%), Positives = 365/619 (58%), Gaps = 72/619 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L LRPHQ EGV+F+++C +G+L +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 212 VPVVIDPRLTAVLRPHQVEGVKFLYKCTTGML-MENQYGCIMADEMGLGKTLQCIALLWT 270
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIA---------LCESTR 280
LL Q GK V+K II P+SLV NW E KW+G V ++A L E
Sbjct: 271 LLKQSPHPGKSSVEKCIIACPSSLVKNWANEFAKWLGKDAVSILAIDGKGGKAELLEKVG 330
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
V + + T P V+IVSYET R S + + S LL+CDE HRLKN +LT +
Sbjct: 331 RWVTALGRNITQP-----VMIVSYETLRTLSVHLA-NCSIGLLLCDEGHRLKNSDSLTFQ 384
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+F+++NF NP LG FR+ +E +II GR+ A
Sbjct: 385 ALNGLNVKRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNEFRKNFENAIIRGRDANAA 444
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ K ++ EL V +FI+RRTN LLS +LP K +VV C L+ Q LY FI S
Sbjct: 445 DAVKAASEKKLKELGGLVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLSLYRLFILS 504
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+K + +S+ L I LKKLCNHP+L+ G E+ I PE F+
Sbjct: 505 PEIKALL--RGAESQPLKAINILKKLCNHPELL-----DLPNDLRGSENLI----PEGFA 553
Query: 502 GRSGSWTGGD-----GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
+G+ TG D + SGK VL R L +R +T D+IVL+SNYTQTLDLF +LC
Sbjct: 554 C-AGTTTGRDRNKKQTVRCDWSGKFLVLERFLHQIRTQTTDKIVLISNYTQTLDLFEKLC 612
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R ++Y + RLDGT +I+KRQKLV+ FN+P EF+FLLSSKAGGCG+NLIG NRL+LFDP
Sbjct: 613 RSKKYGFFRLDGTMTITKRQKLVDQFNNPEGKEFIFLLSSKAGGCGINLIGANRLILFDP 672
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ SK+ L + E+ D+
Sbjct: 673 DWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAVVDEKEDAE 732
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG-----AESIGEGDE----- 726
S + LR LF F+++ E HE C RC+ DG A ++ GD
Sbjct: 733 ----RHFSLDSLRQLFLFNENTLCETHETFKCKRCK---DGRQIIKAPALLYGDASTWNH 785
Query: 727 -TNSANKNDQSDQEVTDIG 744
TN+ KN+ D ++G
Sbjct: 786 FTNAELKNNHDDLLRAEVG 804
>gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
Length = 848
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/589 (43%), Positives = 354/589 (60%), Gaps = 69/589 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA--------------------AGIHGC 211
+P+ +DP L + LRPHQ EGV+F++ CV+GL+ G +GC
Sbjct: 225 IPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDKELVTKGVENTTQEVNRGAYGC 284
Query: 212 ILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRV 270
I+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW E+ KW+G G +
Sbjct: 285 IMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELDKWLGPGTL 344
Query: 271 QLIAL---CESTRDDVVSG-IDSFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCD-- 321
+A+ S + VSG I S+ VLI+SYET R ++ + ++C+
Sbjct: 345 SPLAIDGKKSSLNNGSVSGAIHSWAQAQGRNIVKPVLIISYETLRRNTDQL---KNCNVG 401
Query: 322 LLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAA 362
L++ DE HRLKN +LT +NDL E+FA++NF+NPG+LG +
Sbjct: 402 LMLADEGHRLKNADSLTFTSLDSIDCSRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRS 461
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
FR+ +E I+ R+ AT+E+ + G E+ S+LS V++FI+RRTN +L+ +LP K V
Sbjct: 462 EFRKNFEIPILKSRDADATDEDVRKGQEKLSQLSYVVSKFIIRRTNDILAKYLPCKYEHV 521
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGN 482
+ LTP Q ELY + S++VK+ + + ++ L I LKKLCNHP L+
Sbjct: 522 IFVNLTPFQRELYKKNVESRDVKKLV-KGVGGTQPLKAIGLLKKLCNHPDLV-------- 572
Query: 483 PGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLV 542
E+ P+ + S V+ S K +L R L +R +DD+IV++
Sbjct: 573 DFNEEIENLDEISIPDDYEWNSKR----KDLQVKYSSKFSILERFLAKIRSESDDKIVII 628
Query: 543 SNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCG 602
SNYTQTLDL +LCR++RY +RLDGT I+KRQKLV+ FNDP EFVFLLSSKAGGCG
Sbjct: 629 SNYTQTLDLIEKLCRQKRYGSVRLDGTMGINKRQKLVDRFNDPEGQEFVFLLSSKAGGCG 688
Query: 603 LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKE 662
+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STG+IEEK+YQRQ K
Sbjct: 689 INLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMKL 748
Query: 663 GLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
L + D+ S ++L+ LF F+D E HE HC RC
Sbjct: 749 SLSSCV----VDAKEDVERLFSADNLKQLFQFNDKTICETHETYHCKRC 793
>gi|409082253|gb|EKM82611.1| hypothetical protein AGABI1DRAFT_118061 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 820
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 274/620 (44%), Positives = 371/620 (59%), Gaps = 74/620 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGVQF+++C +G++ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 215 VPVVIDPRLSKVLRPHQVEGVQFLYKCTTGMI-VDNQYGCIMADEMGLGKTLQCIALMWT 273
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-------------GRVQLIALCE 277
LL Q GKP ++K IIV P+SLV NW E+ KW+G G+ +L+ +
Sbjct: 274 LLKQSPHAGKPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKLQ 333
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND--- 334
V + + T P V+I+SYET R ++ + S + LL+CDE HRLKN
Sbjct: 334 RW---VSARGRNVTQP-----VMIISYETLRSVTAHLA-SCTIGLLLCDEGHRLKNSDNQ 384
Query: 335 --QTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
Q LT+ +NDL E+F+++NF NP LG FR+ +E +II GR+
Sbjct: 385 TFQALTSLDVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDA 444
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
A++E K ++ EL + V +FI+RRTN LLS +LP K VV C L+ Q LY F
Sbjct: 445 LASDENKAQSEKKLKELGSLVMKFIIRRTNDLLSKYLPVKYEHVVFCHLSDFQLSLYRLF 504
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++K + +S+ L I LKKLCNHP L+ + S G+ PP+
Sbjct: 505 ITSPDIKALL--RGTESQPLKAINLLKKLCNHPDLL--DLPSELKGSENL------LPPD 554
Query: 499 MFSGRSGSWTGGD---GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
+ G GGD E GK VL R L +R ++D+IVL+SNYTQTLDLF +L
Sbjct: 555 YTGTKGGGGRGGDRNPAVRSEWGGKFIVLERFLHRIRAESNDKIVLISNYTQTLDLFERL 614
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
CR ++Y + RLDG +I+KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG NRL+LFD
Sbjct: 615 CRNKKYGFFRLDGKMTINKRQKLVDQFNDPNGKEFIFLLSSKAGGCGINLIGANRLILFD 674
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ +K+ L + E+ D
Sbjct: 675 PDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKED- 733
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-----GDE---- 726
T+ +F S + LR LFTF++ + HE C RC+ DG + I GD
Sbjct: 734 --TERHF-SVDALRQLFTFNEKTLCDTHETFKCKRCK---DGKQIIKSPALLYGDASTWN 787
Query: 727 --TNSANKNDQSDQEVTDIG 744
TN KN+ D ++G
Sbjct: 788 HFTNGELKNNHDDLLRAEVG 807
>gi|426200084|gb|EKV50008.1| hypothetical protein AGABI2DRAFT_183150 [Agaricus bisporus var.
bisporus H97]
Length = 820
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 274/620 (44%), Positives = 371/620 (59%), Gaps = 74/620 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGVQF+++C +G++ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 215 VPVVIDPRLSKVLRPHQVEGVQFLYKCTTGMI-VDNQYGCIMADEMGLGKTLQCIALMWT 273
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-------------GRVQLIALCE 277
LL Q GKP ++K IIV P+SLV NW E+ KW+G G+ +L+ +
Sbjct: 274 LLKQSPHAGKPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKLQ 333
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND--- 334
V + + T P V+I+SYET R ++ + S + LL+CDE HRLKN
Sbjct: 334 RW---VSARGRNVTQP-----VMIISYETLRSVTAHLA-SCTIGLLLCDEGHRLKNSDNQ 384
Query: 335 --QTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
Q LT+ +NDL E+F+++NF NP LG FR+ +E +II GR+
Sbjct: 385 TFQALTSLDVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDA 444
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
A++E K ++ EL + V +FI+RRTN LLS +LP K VV C L+ Q LY F
Sbjct: 445 LASDENKAQSEKKLKELGSLVMKFIIRRTNDLLSKYLPVKYEHVVFCHLSDFQLSLYRLF 504
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++K + +S+ L I LKKLCNHP L+ + S G+ PP+
Sbjct: 505 ITSPDIKALL--RGTESQPLKAINLLKKLCNHPDLL--DLPSELKGSENL------LPPD 554
Query: 499 MFSGRSGSWTGGD---GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
+ G GGD E GK VL R L +R ++D+IVL+SNYTQTLDLF +L
Sbjct: 555 YTGTKGGGGRGGDRNPAVRSEWGGKFIVLERFLHRIRAESNDKIVLISNYTQTLDLFEKL 614
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
CR ++Y + RLDG +I+KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG NRL+LFD
Sbjct: 615 CRNKKYGFFRLDGKMTINKRQKLVDQFNDPNGKEFIFLLSSKAGGCGINLIGANRLILFD 674
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ +K+ L + E+ D
Sbjct: 675 PDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKED- 733
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-----GDE---- 726
T+ +F S + LR LFTF++ + HE C RC+ DG + I GD
Sbjct: 734 --TERHF-SVDALRQLFTFNEKTLCDTHETFKCKRCK---DGKQIIKSPALLYGDASTWN 787
Query: 727 --TNSANKNDQSDQEVTDIG 744
TN KN+ D ++G
Sbjct: 788 HFTNGELKNNHDDLLRAEVG 807
>gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
Length = 879
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/570 (45%), Positives = 348/570 (61%), Gaps = 56/570 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L R LRPHQ GV+F++ C SGL++A GCI+AD+MGLGKTLQ +AL++T
Sbjct: 281 VPVVIDPKLARVLRPHQVAGVRFLYRCTSGLVDARA-KGCIMADEMGLGKTLQCLALMWT 339
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRD-DVVSGID 288
LL QG G+ + K IIV P+SLV NW E+ KW+G G + +A+ +ST+ D+ +
Sbjct: 340 LLRQGPSGRRTIDKCIIVCPSSLVRNWANEMDKWLGPGALTPLAVDGKSTKSADLGQALQ 399
Query: 289 SFTDPCSS------LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
+ C++ VLI+SYET R ++ K + +E L++ DE HRLKN +LT
Sbjct: 400 QW---CTASGRNIVRPVLIISYETLRRNADKLAGTE-VGLMLADEGHRLKNGDSLTFTAL 455
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL E+F+++ F NPG LG FRR YE +I+ GR+ AT++
Sbjct: 456 NSLRCERRVILSGTPIQNDLSEYFSLLTFANPGYLGTRNEFRRNYENTILRGRDADATDD 515
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E K G ++ +ELS V++FI+RRTN +LS +LP K VV L+P Q LY HFI S +
Sbjct: 516 EVKKGEQKLAELSQAVSKFIIRRTNDILSKYLPVKYEYVVFVGLSPFQRALYEHFISSDD 575
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIY--DTIKSGNPGTTGFEDCIRFFPPEMFS 501
+ I+ S+ L I LKKLC HP L+ D I+ + P + S
Sbjct: 576 SSKLIA-----SQPLKAIDMLKKLCTHPDLLSLPDDIQGSR----------KLIPDDYQS 620
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+G W S K +L R L +R +T+D+IV++SNYT+TLDL ++CR +RY
Sbjct: 621 SEAGGRGREIQTW--FSAKFSILERFLHQIRTQTNDKIVVISNYTRTLDLIEKMCRYKRY 678
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
LRLDGT +I+KRQK+V+ FNDP NEF+FLLSSKAGGCG+NLIG NRLVL DPDWNPA
Sbjct: 679 GSLRLDGTMTINKRQKIVDRFNDPEGNEFIFLLSSKAGGCGINLIGANRLVLMDPDWNPA 738
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D+QA ARVWRDGQKK FIYRF+ TGTIEEK++QRQ K L + + D
Sbjct: 739 ADQQALARVWRDGQKKDCFIYRFMCTGTIEEKIFQRQSMKLSLSSCVVDAKEDVE----R 794
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
S + LR LF + D + H+ +C RC
Sbjct: 795 IFSGDALRLLFQYRPDTTCDTHDTYNCKRC 824
>gi|354545782|emb|CCE42510.1| hypothetical protein CPAR2_201530 [Candida parapsilosis]
Length = 836
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/568 (44%), Positives = 345/568 (60%), Gaps = 46/568 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++ GCI+AD+MGLGKTLQ + L++T
Sbjct: 233 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKA-KGCIMADEMGLGKTLQCLTLMWT 291
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q GK ++K IIV P+SLV NW EI KW+G V L L + + + +
Sbjct: 292 LLKQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGV-LTPLAVDGKSTKSNELGAAL 350
Query: 292 DPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
S+ Q VLI+SYET R + K + +E L++ DE HRLKN ++LT
Sbjct: 351 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGESLTFTALNS 409
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+NDL E+F+++NF NPG LG FR+ +E +I+ GR+ AT++E+
Sbjct: 410 LRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFENAILRGRDADATDKER 469
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G + ELS V++FI+RRTN +LS +LP K V+ L+P+Q +LYNHFI S +K
Sbjct: 470 EKGDAKLIELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKDLYNHFITSPEIK 529
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
+ I Q L I LKKLCNH E C P + S +
Sbjct: 530 KLIKGIGSQP--LKAIGMLKKLCNH--------PDLLDLPDDLEGCESLKPEDYESSITA 579
Query: 506 SWTGGD-GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
+ D W SGK +L R L + + TDD+IVL+SNYTQTLDL ++CR ++Y L
Sbjct: 580 TGRRRDVQTW--FSGKFMILERFLHKIHRETDDKIVLISNYTQTLDLIEKMCRNKKYGAL 637
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDGT +I+KRQKLV+ FNDP+ +EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA+D+
Sbjct: 638 RLDGTMNINKRQKLVDKFNDPNGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQ 697
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S
Sbjct: 698 QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE----RLFS 753
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
++LR LF + D + H+ +C RC+
Sbjct: 754 ADNLRQLFMYQPDTECDTHDTYNCKRCK 781
>gi|366987377|ref|XP_003673455.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
gi|342299318|emb|CCC67069.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
Length = 875
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/590 (43%), Positives = 349/590 (59%), Gaps = 69/590 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL-------------------NAAGIHGCI 212
VP+ +DP L + LRPHQ EGV+F++ CV+GL+ N G +GCI
Sbjct: 250 VPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAEAVNTGIVKTEQNNRGAYGCI 309
Query: 213 LADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----- 267
+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW E+ KW+G
Sbjct: 310 MADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELVKWLGPGTLS 369
Query: 268 -----GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD- 321
G+ +A ST + V T VLI+SYET R + + +CD
Sbjct: 370 PLAVDGKKSSLASGNSTVAEAVHSWAQATGRNIVKPVLIISYETLRRNVDQL---RNCDV 426
Query: 322 -LLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDA 361
L++ DE HRLKN +LT +NDL E+FA++NF+NPG+LG
Sbjct: 427 GLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTR 486
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
+ FR+ +E I+ R+ +T+EE G E+ +LS V++FI+RRTN +LS +LP K
Sbjct: 487 SEFRKNFELPILRSRDADSTDEEITKGEEQLQKLSTIVSKFIIRRTNDILSKYLPCKYEH 546
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
V+ L P Q ++Y+ + S++V + + + ++ L I LKKLCNHP LI +
Sbjct: 547 VIFVNLKPFQKDVYHRLLKSRDVNKMV-KGVGGTQPLKAIGVLKKLCNHPNLI-----NL 600
Query: 482 NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
+ F+D E+ + + + SGK +L R L ++ +DD+IVL
Sbjct: 601 DEEIDDFDDL------EIPDEYNMQGSKSRDVQPQFSGKFAILERFLHKIKTESDDKIVL 654
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGC 601
+SNYTQTLDL ++CR + Y +RLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGC
Sbjct: 655 ISNYTQTLDLIEKMCRNKHYSSVRLDGTMTINKRQKLVDRFNDPEGQEFIFLLSSKAGGC 714
Query: 602 GLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSK 661
G+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STG+IEEK+YQRQ K
Sbjct: 715 GINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMK 774
Query: 662 EGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
L + D+ S+++LR LF ++D E HE HC RC
Sbjct: 775 MSLSSCV----VDAKEDVERLFSSDNLRQLFQYNDKTICETHETYHCKRC 820
>gi|328768836|gb|EGF78881.1| hypothetical protein BATDEDRAFT_12619 [Batrachochytrium
dendrobatidis JAM81]
Length = 680
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 266/618 (43%), Positives = 363/618 (58%), Gaps = 75/618 (12%)
Query: 139 ENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNL----------------VPITVDPLLVR 182
+ N++ P D ++L++P+ ++ L V + VDPLL R
Sbjct: 28 KTNILSGPLHDPTEPDAVILYEPKVILSEAAKLEALKSTAIGGKGPVGEVHVVVDPLLGR 87
Query: 183 FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKP 241
LRPHQ EGVQF++ C +G AG GCI+AD+MGLGKTLQ IALL+TLL Q GKP
Sbjct: 88 VLRPHQIEGVQFLYNCTTGE-QVAGAFGCIMADEMGLGKTLQCIALLWTLLRQSPIPGKP 146
Query: 242 MVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCES--TRDDVVSGIDSFTDPCSSL- 297
++KAII P+SLV NW E+KKW+G RV+ + C++ T++ I+ F
Sbjct: 147 WIEKAIIACPSSLVKNWANELKKWLGENRVRPYS-CDNKGTKEQTTKDIEQFVAAKGRGV 205
Query: 298 --QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---------------- 339
VLIVSYET R+++ +E LL+CDE HRLKN +LT
Sbjct: 206 VNPVLIVSYETLRIYTPILVKTE-IGLLLCDEGHRLKNGDSLTYTSLNQLKAKRRVILSG 264
Query: 340 ---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
+NDL E+F++++F P +LG A FR+ +E I+ GR+ A+++++K ER EL
Sbjct: 265 TPIQNDLTEYFSLLSFAIPDVLGSEADFRKKFELPILRGRDADASDKDRKTSEERLGELL 324
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK 456
N+FI+RRT LL+ +LP K VV CKL+ +Q+ +Y HF SK ++ + + K
Sbjct: 325 TTANKFIIRRTAELLTKYLPVKYEYVVFCKLSEMQATIYRHF--SKQEMNKLAAKERGEK 382
Query: 457 ILAYITALKKLCNHPKLIY--DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
IT LKKL NHP L+ D S P F++C PE
Sbjct: 383 PEKAITTLKKLVNHPILLNRDDMEDSWIPKEFSFKEC----QPEY--------------- 423
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
SGKM++L R+L + ++ D+IVL+SNYTQTLD ++CR R++ RLDGT +I K
Sbjct: 424 ---SGKMYLLERMLCQMHAQSSDKIVLISNYTQTLDAIEKMCRVRKWQLCRLDGTMTIQK 480
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQKLV+ FNDP++ EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPAND QA ARVWRDG
Sbjct: 481 RQKLVDRFNDPTQPEFIFLLSSKAGGCGINLIGANRLILTDPDWNPANDAQALARVWRDG 540
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
Q K FIYRF++TGTIEEK++QRQ K+ L + E+ D S E LR LF +
Sbjct: 541 QTKVCFIYRFIATGTIEEKIFQRQAHKQSLSSCVVDEEQDVE----RHFSLEALRQLFQY 596
Query: 695 HDDVRSEIHENMHCTRCQ 712
+D S+ H+ C RC+
Sbjct: 597 NDQTMSDTHDAFKCKRCR 614
>gi|393232942|gb|EJD40518.1| SNF2 family domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 821
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/574 (45%), Positives = 353/574 (61%), Gaps = 49/574 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP+L LRPHQ EGV+F+++C SG++ +GCI+AD MGLGKTLQ I LL+T
Sbjct: 211 VPVVIDPVLSAILRPHQVEGVKFLYKCTSGMM-VENQYGCIMADAMGLGKTLQCITLLWT 269
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q GKP ++K II P+SLV NW E KW+G G V +A+ + T+ D+++ +
Sbjct: 270 LLKQSPHAGKPTIEKCIIACPSSLVKNWANEFTKWLGEGTVPCLAVDGKGTKADLIANVQ 329
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ +L V+IVSYET R + + + + LL+CDE HRLKN +LT +
Sbjct: 330 RWVAASGRNVTLPVMIVSYETLRSLGAWLA-NATIGLLLCDEGHRLKNSDSLTFKALNSL 388
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL E+F+++NF NP LG A F++ +E +II GR+ AT+ EK+
Sbjct: 389 NVKRRVILSGTPIQNDLSEYFSLLNFANPDFLGSKADFKKNFENAIIRGRDADATDGEKE 448
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ EL A V++FI+RR N LLS +LP K +VV C+ +P Q LY FI S +K+
Sbjct: 449 KSEAKLKELGALVSRFIIRRANDLLSKYLPVKYEQVVFCQPSPFQVALYKLFISSPEIKK 508
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ Q L I LKKLCNHP+L+ D K G ++ I PE F G G
Sbjct: 509 LLRGVGSQP--LKAINILKKLCNHPELL-DLPKD----LHGSDELI----PEGFVGAGGD 557
Query: 507 WTGGDGAW-------VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
G G + GK VL R L +R T+D+IVL+SNYTQTL+LF +LCR++
Sbjct: 558 AGGFGGGRRERRELRCDWGGKFAVLERFLHRIRTETNDKIVLISNYTQTLELFERLCRDK 617
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
Y + RLDG+ S+ KRQKLV+ FN+P EF+FLLSSKAGGCG+NLIG NRL+LFDPDWN
Sbjct: 618 GYGFFRLDGSMSVIKRQKLVDQFNNPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWN 677
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA D+QA ARVWRDGQ K F+YRF+S+GTIEEK++QRQ SK+ L + E+ D+
Sbjct: 678 PAADQQALARVWRDGQTKECFVYRFISSGTIEEKIFQRQASKQALSSCVVDEKEDAE--- 734
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
S + LR LF F ++ E H+ C RC+N
Sbjct: 735 -RHFSLDALRQLFMFQENAICETHDTFKCQRCKN 767
>gi|392573615|gb|EIW66754.1| hypothetical protein TREMEDRAFT_70028 [Tremella mesenterica DSM
1558]
Length = 816
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/589 (44%), Positives = 358/589 (60%), Gaps = 46/589 (7%)
Query: 157 VLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADD 216
V+ ++P+ VP+ +DP L + LRPHQ EGV+F++ C +GL+ A G GCI+AD+
Sbjct: 204 VILGIQDPKKKSEVKVPVVIDPALSKILRPHQIEGVKFLYRCTTGLM-AEGAWGCIMADE 262
Query: 217 MGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIA 274
MGLGKTLQ IAL++TLL Q GK +K I+V PTSLV NW E+ KW+G G + +
Sbjct: 263 MGLGKTLQCIALMWTLLKQSPTSGKGTCEKTIVVCPTSLVGNWANELIKWLGPGAINPLV 322
Query: 275 L-CESTRDDVVSGIDSF---TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHR 330
L + + +++ + + T + VLI SYE R +F + LL+ DE HR
Sbjct: 323 LDGKGGKPEMIPAVRRWIQATGRGVTQPVLIASYENLRTLQEEFG-NAPIGLLLADEGHR 381
Query: 331 LKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
LKN TLT + NDL E+FA++NF NP LG F++ +E
Sbjct: 382 LKNADTLTFQALTQLNVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSRLDFKKNFEAK 441
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I+ GR+ A+E+E++ + EL V++FI+RRTN LLS +LP K VV C+ + LQ
Sbjct: 442 ILRGRDADASEKEREECDAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSKLQ 501
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
+LYN F+ SK+V+R + K S+ L I L+KL NHP L+ + PG+ F
Sbjct: 502 VDLYNLFVTSKDVQRLL--RGKDSQPLKAIGLLRKLVNHPDLL--RLPEDLPGSEKFL-- 555
Query: 492 IRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
PE + G+ G G + ELSGK VL R+L H+ +T+D+IVL+SN TQTLDL
Sbjct: 556 -----PEGY-GKVGRERGVN---CELSGKFVVLERMLHHIHTQTNDKIVLISNTTQTLDL 606
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
+LCR ++Y +RLDG+ S+ KR K V FN+P EFVFLLSSKAGGCG+NLIG NRL
Sbjct: 607 MERLCRLKKYGCVRLDGSMSVPKRNKTVERFNNPENKEFVFLLSSKAGGCGINLIGANRL 666
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+LFDPDWNPA+D+QA ARVWRDGQKK F+YRF +TGTIEEK++QRQ K+ L + E
Sbjct: 667 ILFDPDWNPASDQQALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDE 726
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
D++ + +DLR LF FH + S+ H+ C RCQ +S
Sbjct: 727 AEDTA----RHFTADDLRQLFKFHPETLSDTHDTYKCKRCQGSKQNVKS 771
>gi|348588337|ref|XP_003479923.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Cavia
porcellus]
Length = 933
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 281/698 (40%), Positives = 391/698 (56%), Gaps = 112/698 (16%)
Query: 74 PRVLSVTEGAAVC-RKPFKPPC-SNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNR 131
P V ++ A C KPFK C SN +N D + + P N
Sbjct: 208 PAVPDSSQTARKCFSKPFKSVCKSNSKENIQDDFQKYKPRHDPYTP------------NS 255
Query: 132 LDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREG 191
L +PR +N+ N P VD + +DP +V LRPHQ+EG
Sbjct: 256 LVMPRPDKNHQWMLNKNCFPVVD-------------------VVIDPHVVYHLRPHQKEG 296
Query: 192 VQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVT 250
+ F++ECV G+ G +G ILAD+MGLGKTLQ I+L++TL CQG + G+P++K+ +IVT
Sbjct: 297 IIFLYECVMGM-RMNGRYGAILADEMGLGKTLQCISLIWTLQCQGPYGGQPVIKRTLIVT 355
Query: 251 PTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF-- 307
P SLV+NW E K+W+G R+++ + D ++ F + VLI+SYE
Sbjct: 356 PGSLVTNWRKEFKQWLGSERIKIFTV------DQDHKVEEFMKS-TFYSVLIISYEMLLR 408
Query: 308 ---RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEE 345
++ + KF DLLICDE HRLKN T +NDL+E
Sbjct: 409 SLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALFSLSCKKRIILTGTPIQNDLQE 462
Query: 346 FFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILR 405
FFA+++F NPG+LG + +R+ YE II REP+A+EEEK+LG R++EL+ FILR
Sbjct: 463 FFALIDFVNPGVLGSLSSYRKIYEEPIIMSREPSASEEEKELGERRAAELTRLTGLFILR 522
Query: 406 RTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALK 465
RT +++ +LPPKI V+ C+ LQ ELY ++S+ VK + + S L I ALK
Sbjct: 523 RTQEVINKYLPPKIENVLFCRPGTLQIELYKKLLNSQTVKFCLQGSVENSPHLICIGALK 582
Query: 466 KLCNHPKLIYDTIKS--------GNPGTTGFEDCIRFFP----PEMFSGRSGSWTGGDGA 513
KLCNHP L++++IK GN + +E + FP P +F+ +
Sbjct: 583 KLCNHPCLLFNSIKGKECSTTCDGNEEKSLYEGLLNVFPTDYNPLVFTEKE--------- 633
Query: 514 WVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
SGK+ VL++LL + + R +++VLVSNYTQTLD+ +C+ Y Y RLDG T I
Sbjct: 634 ----SGKLQVLSQLLAVIHELRPTEKVVLVSNYTQTLDILQDICKRYGYSYTRLDGQTPI 689
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
S+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA +RVWR
Sbjct: 690 SQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWR 749
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
DGQK V IYR L+TGTIEEK+YQRQ+SK+ L + S Q S E+L++LF
Sbjct: 750 DGQKHAVHIYRLLTTGTIEEKIYQRQISKQALSGAVVDLTKTSEHIQ---FSVEELKNLF 806
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
T +HEN HC D E GE D T+ +
Sbjct: 807 T--------LHENSHCVTHDLLD--CECTGEKDHTDDS 834
>gi|388581680|gb|EIM21987.1| DNA supercoiling [Wallemia sebi CBS 633.66]
Length = 806
Score = 464 bits (1194), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/565 (45%), Positives = 346/565 (61%), Gaps = 44/565 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP+L + LRPHQ EGV+F++ C +GL A GCI+AD+MGLGKTLQ IALL+T
Sbjct: 205 VPVVIDPILSKVLRPHQVEGVKFLYRCTTGL-TAPDAQGCIMADEMGLGKTLQCIALLWT 263
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGID 288
LL Q GKP V+K IIV P+SLV NW E KW+G G V +A+ + T++ ++S +
Sbjct: 264 LLKQSPIPGKPTVEKCIIVCPSSLVPNWANEFTKWLGTGAVGCMAVDHKGTKEQLISDVK 323
Query: 289 SFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ + V+IVSYET R + ++ L++ DE HR+KN +++T +
Sbjct: 324 QWCAASGRSVTQPVMIVSYETLRNLTEVIGRAQ-VGLMMLDEGHRMKNSESMTFKALTEI 382
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL E+F+++NF NP LG+ FR+ +E I+ GR+ AT++EK+
Sbjct: 383 HCKRRVILSGTPIQNDLSEYFSLLNFANPDYLGNKNEFRKNFENIILRGRDALATDKEKQ 442
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ E+ EL+ V++FI+RRTN +LS LP K VV L+PLQ +LY FI S +
Sbjct: 443 MSEEKLKELNMAVSKFIIRRTNDILSKFLPVKYEHVVFTALSPLQLDLYKFFIESPETQA 502
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ + K S+ L I LKKLCNHP LI + K PG+ P E + R
Sbjct: 503 LL--KGKASQPLKAIGILKKLCNHPNLI--SPKDDIPGSK------VLLPEENIAERLDK 552
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+ AW SGKM VL R + +R+ +DD+IVLVSNYTQTLDL +L R+ ++RL
Sbjct: 553 KRPANPAW---SGKMMVLMRFIERMRKNSDDKIVLVSNYTQTLDLLEKLFAALRWGFMRL 609
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT ++ KR KLV+ FNDP EF+FLLSSKAGGCGLNLIG NRL+LFDPDWNPA D+QA
Sbjct: 610 DGTMAVKKRGKLVDRFNDPESREFIFLLSSKAGGCGLNLIGANRLILFDPDWNPAADQQA 669
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK F+YRF+ TGT+EE+V RQ K+ L + E D+ S +
Sbjct: 670 LARVWRDGQKKECFVYRFIGTGTLEEQVLMRQAYKQSLSACVVDEAEDAD----RHFSKD 725
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRC 711
LR+LF + S +H+ C RC
Sbjct: 726 LLRELFKHYPGTDSHMHDTFKCKRC 750
>gi|407425454|gb|EKF39433.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi marinkellei]
Length = 1049
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/705 (39%), Positives = 394/705 (55%), Gaps = 83/705 (11%)
Query: 135 PRTVENNVIEENFTLPPGVDP-----LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQ 188
P+T + + E L P DP +VL++ + ++ G L V + VDP++ LRPHQ
Sbjct: 310 PKTGPSGIRAE---LKPLHDPDREGAVVLFRADYKRDANGRLQVSVVVDPVIGDKLRPHQ 366
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAII 248
R GV+F+F+C++G G HG ILAD+MGLGKT+Q++A +YT L QG G P +K ++
Sbjct: 367 RAGVRFLFDCITGE-RMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGVPTARKCLV 425
Query: 249 VTPTSLVSNWEAEIKKWVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYE 305
VTP+SLV NW E KW+G G V+ ++ EST D ++S D D VL++SY+
Sbjct: 426 VTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGD------VLVISYD 479
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
R + ++ S +S +L++CDE HRLKN + T + NDL EF
Sbjct: 480 QLRKYITRISTLKSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEF 539
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
AMV F NPGILG F R +E ++ GR+P E + LG +R+ LS +FILRR
Sbjct: 540 HAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRR 599
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T ++ ++LPPK+ V +L LQS Y K + E+ L I+AL+K
Sbjct: 600 TQSINESYLPPKVDVTVFVRLGELQSVAYE--------KLSALVESSLCPPLVLISALRK 651
Query: 467 LCNHPKLIYDTI-KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
LCNH L Y+ + S + P+ + +SG+ + G GKMH ++
Sbjct: 652 LCNHMDLFYEAVLNSSKEEVREGRGIPKTVLPKGY--KSGTLSEAAG------GKMHFVS 703
Query: 526 RLLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND 584
+L LR D D++V+VSN+TQTLD+ A +CR++R + +LDG+ + +RQ++V+ FN
Sbjct: 704 LMLDELRNNGDRDKLVIVSNFTQTLDVIAAMCRQKRISFFQLDGSMPVKRRQEVVDRFNV 763
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
P E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRVFIYR
Sbjct: 764 PESQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRL 823
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
LS G+IEEK+YQRQ+SK+GL + Q+DS + E+LR LF + D RS+ H+
Sbjct: 824 LSAGSIEEKIYQRQVSKQGLSANVVDMQSDSK----QHFTLEELRSLFCYRKDTRSDTHD 879
Query: 705 NMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLG 764
+HCT C+ + S G G L+ + + EK+ G
Sbjct: 880 LLHCTNCEAVVEMLASPSSG------------------AGRAKELSAPMKFRRVGEKKSG 921
Query: 765 TPLEEDLNNWGHHFYSMSVP-DAILQA---SAGDEVTFVFTNQVD 805
P ++L W H P D +++A A +F+F ++ D
Sbjct: 922 -PRMDELRGWRHFARCEEFPLDKVVRAISKKAPGLCSFIFADERD 965
>gi|68072323|ref|XP_678075.1| DNA repair protein rad54 [Plasmodium berghei strain ANKA]
gi|56498427|emb|CAH96805.1| DNA repair protein rad54, putative [Plasmodium berghei]
Length = 860
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 308/851 (36%), Positives = 438/851 (51%), Gaps = 159/851 (18%)
Query: 49 DEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEG-AAVCRKPFKPPCSNGYDNGNDQLAR 107
D+ +S N D R + + R +LLP +LS+ + PF+ P + + L +
Sbjct: 14 DDADESNNTD---RKCITLVRATLLP-ILSIGKNEKTTLFTPFRNPLPGFVSDKSLYLRK 69
Query: 108 RLCARKRFVPWGSSRPVLVTITNRLDLPRTV-----ENNVIEENFTLPPGVDPLVLWQPE 162
L + R W + + +PR EN+ +E+ + DPLVL++ E
Sbjct: 70 TLGVKVRKTGWINLM--------KNSIPRRSDETGDENDKVED---IIRKFDPLVLYEDE 118
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
+ I VDP+L ++LR HQREGVQF+FEC+ L + I GCILADDMGLGKT
Sbjct: 119 NSK--------IEVDPILAQYLREHQREGVQFVFECLMNLKDEK-ISGCILADDMGLGKT 169
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
LQSI++LYTLL QG++ K V++ +I+ P SL++NW EI KW+ R + + +S ++
Sbjct: 170 LQSISVLYTLLKQGYNKKAAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDSVKEK 229
Query: 283 VVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
+VS ++ F S +LI SYE FR+++ S + D++ICDEAHRLKND+T T
Sbjct: 230 IVSKLEGFKYDLKS-TILICSYECFRINNDSIDKS-AIDMIICDEAHRLKNDKTKTYTSI 287
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL EFFA+++ NP + D FR+ + I+ GR+ ATE+
Sbjct: 288 YKLSAKKRLLLSGTPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEK 347
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E+++ ER +ELS +N+FILRRTN LLS LP K + + KL P+Q LY F+ K
Sbjct: 348 EQQIASERLAELST-INKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEGLYVLFLKDKK 406
Query: 444 VKRAISEETKQSKILAYITALKKLCNHP-----------------KLIYDTIK------- 479
+ ++ + K + +L I L+K+CNHP KLI D I
Sbjct: 407 LLKSDNSNNKVN-VLINIKKLEKICNHPLLLNANDIKDIGHIPVVKLIEDVIAENVKGRG 465
Query: 480 -----------SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE------------ 516
S N D + + G + VE
Sbjct: 466 NKISNKNSVNLSTNNSMENISDTLNNNNNNNNGSKDGEYLRERRKAVELDYDKSVKKLIE 525
Query: 517 ------------LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
LS K +L LL ++ T+D++V+VSNYTQTLD LC+E Y ++
Sbjct: 526 ECKRDVYRCYYNLSSKFQLLHFLLKTIKHETNDKVVIVSNYTQTLDYMEILCKENHYKFV 585
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDG SI KR K+++ F + + + F+FLLSSK+GGCG+NLI NRL+L DPDWNPANDK
Sbjct: 586 RLDGGISIKKRHKVISDFTN-TDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDK 644
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWR+GQKK +IYR TGTI+EKVYQRQ+SK+GL +I T+ S Q LS
Sbjct: 645 QALARVWREGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVT-NTNLSKDQ---LS 700
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIG 744
E+++ LF + ++ E H+N+ C RC N+ D E E
Sbjct: 701 DENVKKLFNYKNNTICETHDNIECNRC-NFKDNTEVYSE--------------------- 738
Query: 745 GFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQV 804
QL EED+N W HH +VPDA+L A E T N +
Sbjct: 739 -----------------QLEDFEEEDVNTWAHHLNIDTVPDAVL-IKAVKEATECKINHM 780
Query: 805 DGKLVPIESKV 815
+ +PI K+
Sbjct: 781 NT--LPILKKL 789
>gi|365991713|ref|XP_003672685.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
gi|343771461|emb|CCD27442.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
Length = 872
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/590 (43%), Positives = 349/590 (59%), Gaps = 70/590 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL-------------------NAAGIHGCI 212
VP+ +DP L + LRPHQ EGV+F++ CV+GL+ N G +GCI
Sbjct: 248 VPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAETVNTGIVAPQQNNRGAYGCI 307
Query: 213 LADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQL 272
+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW E+ KW+G
Sbjct: 308 MADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLS 367
Query: 273 IALCESTRDDVVSGIDSFTDPCSSL----------QVLIVSYETFRMHSSKFSCSESCD- 321
+ + + SG + + S VLI+SYET R + + ++CD
Sbjct: 368 PLAIDGKKSSLASGSTTVAEAIKSWGQAKGRNIVKPVLIISYETLRRNVDQL---QNCDV 424
Query: 322 -LLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDA 361
L++ DE HRLKN +LT +NDL E+FA++NF+NPG+LG
Sbjct: 425 GLMLADEGHRLKNADSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTR 484
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
+ FR+ +E I+ R+ +T++E K G E+ +LS V++FI+RRTN +LS +LP K
Sbjct: 485 SEFRKNFEIPILRSRDADSTDDEIKKGEEQLQKLSDIVSKFIIRRTNDILSKYLPCKYEH 544
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
V+ L P Q +Y + I S+++K+ + + ++ L I LKKLCNHP L+
Sbjct: 545 VIFVDLKPFQKNVYQNLIKSRDIKKMM-KGVGGTQPLKAIGVLKKLCNHPSLL------- 596
Query: 482 NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
E+ F E+ S + S D + SGK +L R L ++ +DD+IVL
Sbjct: 597 ----NLDEELDNFDNLEIPSDYNMSSNSRD-IQPKYSGKFSILERFLHKIKTESDDKIVL 651
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGC 601
+SNYTQTLDL ++CR + Y LRLDGT +I+KRQKLV+ FNDP EF+FLLSSKAGGC
Sbjct: 652 ISNYTQTLDLIEKMCRTKHYGSLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGC 711
Query: 602 GLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSK 661
G+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STG+IEEK+YQRQ K
Sbjct: 712 GINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMK 771
Query: 662 EGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
L + D+ S ++LR LF ++D E HE HC RC
Sbjct: 772 MSLSSCV----VDAKEDVERLFSADNLRQLFQYNDKTICETHETYHCKRC 817
>gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1047
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/705 (39%), Positives = 396/705 (56%), Gaps = 83/705 (11%)
Query: 135 PRTVENNVIEENFTLPPGVDP-----LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQ 188
P+T + + E L P DP +VL++ + ++ G L V + VDP++ LRPHQ
Sbjct: 310 PKTGPSGIRAE---LKPLHDPDREGAVVLFRADYKRDANGRLQVSVVVDPIIGDKLRPHQ 366
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAII 248
R GVQF+F+C++G G HG ILAD+MGLGKT+Q++A +YT L QG G P +K ++
Sbjct: 367 RAGVQFLFDCITGE-RMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGVPTARKCLV 425
Query: 249 VTPTSLVSNWEAEIKKWVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYE 305
VTP+SLV NW E KW+G G V+ ++ EST D ++S D D VL++SY+
Sbjct: 426 VTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGD------VLVISYD 479
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
R + ++ S S +L++CDE HRLKN + T + NDL EF
Sbjct: 480 QLRKYITRISTLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEF 539
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
AMV F NPGILG F R +E ++ GR+P E + LG +R+ LS +FILRR
Sbjct: 540 HAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRR 599
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T ++ ++LPPK+ V +L LQS Y K + E L I+AL+K
Sbjct: 600 TQSINESYLPPKVDVTVFVRLGELQSVAYE--------KLSDLVEGSSCPPLVLISALRK 651
Query: 467 LCNHPKLIYDTI-KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
LCNH L Y+ + S + P+ + +SG+ + G GKMH ++
Sbjct: 652 LCNHMDLFYEAVLNSSKEEVREGHGIPKSVLPKGY--KSGTLSEAAG------GKMHFVS 703
Query: 526 RLLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND 584
+L LR D D++V+VSN+TQTLD+ A +CR++R + +LDG+ + +RQ++V+ FN
Sbjct: 704 LMLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNV 763
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
P E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRVFIYR
Sbjct: 764 PESQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRL 823
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
LS G+IEEK+YQRQ+SK+GL + ++DS + E+LR LF + D RS+ H+
Sbjct: 824 LSAGSIEEKIYQRQVSKQGLSANVVDMKSDSK----QHFTLEELRSLFCYRKDTRSDTHD 879
Query: 705 NMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLG 764
+HCT C E++ E ++S+ + L+ + + EK+ G
Sbjct: 880 LLHCTNC-------EAVVELLASSSSGAGKAKE-----------LSAPMKFRRVGEKKSG 921
Query: 765 TPLEEDLNNWGHHFYSMSVP-DAILQA---SAGDEVTFVFTNQVD 805
P ++L W H P D +++A A +F+F ++ D
Sbjct: 922 -PRMDELRGWRHFARCEEFPLDKVVRAISSKAPGLCSFIFADERD 965
>gi|449547038|gb|EMD38006.1| DNA repair protein SNF2 family [Ceriporiopsis subvermispora B]
Length = 814
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/621 (43%), Positives = 361/621 (58%), Gaps = 72/621 (11%)
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
N VP+ +DP L + LRPHQ EGV+F+++C +G++ +GCI+AD+MGLGKTLQ IAL+
Sbjct: 207 NKVPVVIDPRLSKVLRPHQVEGVKFLYKCTTGMM-VDNQYGCIMADEMGLGKTLQCIALM 265
Query: 230 YTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCES 278
+TLL Q +P + K II P SLV NW E+ KW+G G+ + E
Sbjct: 266 WTLLKQSPHASRPTIDKCIIACPASLVKNWANELAKWLGKDTISALAIDGKGGKAEMLER 325
Query: 279 TRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC--DLLICDEAHRLKNDQT 336
V + + + P V+IVSYET R ++ ++C LL+CDE HRLKN ++
Sbjct: 326 VARWVAASGRNVSQP-----VMIVSYETLRTLAAHL---QNCPIGLLLCDEGHRLKNSES 377
Query: 337 LTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGRE 377
T + NDL E+F+++NF NP LG FR+ +E +II GR+
Sbjct: 378 QTFQVLNELNVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRD 437
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNH 437
A++ K ++ EL V +FI+RRTN LLS +LP K +VV C L+PLQ LY
Sbjct: 438 ADASDAIKAACDKKLKELGDLVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSPLQLSLYRL 497
Query: 438 FIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP 497
FI S ++ + S+ L I LKKLCNHP+L+ PG D + P
Sbjct: 498 FISSPEIQALL--RGTDSQPLKAINILKKLCNHPELL------DLPGDLRGSD--KLLPE 547
Query: 498 EMF-SGRSGSWTGGDGAWV--ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
E +G + GG V E SGK VL R L +R T+D+IVL+SNYTQTLDLF +
Sbjct: 548 EYIGAGANAKGRGGRNQVVHCEWSGKFVVLERFLHRIRTETNDKIVLISNYTQTLDLFEK 607
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
L R + Y Y RLDGT +I+KRQKLV+ FN+P EF+FLLSSKAGGCG+NLIG NRL+LF
Sbjct: 608 LLRTKGYGYFRLDGTMTINKRQKLVDQFNNPEGKEFIFLLSSKAGGCGINLIGANRLILF 667
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ SK+ L + E+ D
Sbjct: 668 DPDWNPAADQQALARVWRDGQKKECFVYRFITTGTIEEKIFQRQASKQSLSSAVVDEKED 727
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-----GDE--- 726
S + LR LF F+++ E HE C RC+ DG +++ GD
Sbjct: 728 VE----RHFSIDSLRKLFLFNENTLCETHETFKCKRCK---DGRQTMKAPALLYGDASTW 780
Query: 727 ---TNSANKNDQSDQEVTDIG 744
TN KN+ D ++G
Sbjct: 781 NHFTNGELKNNHDDLLRAEVG 801
>gi|291388286|ref|XP_002710621.1| PREDICTED: RAD54 homolog B [Oryctolagus cuniculus]
Length = 911
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 267/623 (42%), Positives = 372/623 (59%), Gaps = 71/623 (11%)
Query: 151 PGVDP-----LVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVS 200
P DP LV+ QP++ N LV + +DP LV LRPHQ+EG+ F++ECV
Sbjct: 253 PRYDPYMPNSLVMPQPDKNHQWMFNKKCFPLVDVVIDPHLVYHLRPHQKEGIIFLYECVM 312
Query: 201 GLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWE 259
G+ G G ILAD+MGLGKTLQ I+L++TL CQG + GKP++KK +IVTP SLV+NW
Sbjct: 313 GM-RMDGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWR 371
Query: 260 AEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF-----RMHSSK 313
E +KW+G R+++ + D ++ F C VLI+SYE ++ + K
Sbjct: 372 KEFQKWLGSERIKIFTV------DQDHKVEEFVQ-CMFYSVLIISYEMLLRSLDQIKNIK 424
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
F DLLICDE HRLKN T +NDL+EFFA+++F N
Sbjct: 425 F------DLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVN 478
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
PGILG + +R+ YE II REP+A+EEEKKLG R++EL+ F+LRRT +++ +
Sbjct: 479 PGILGSLSSYRKIYEEPIIVSREPSASEEEKKLGERRAAELTCLTGLFVLRRTQEIINKY 538
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LPPKI VV C+ LQ ELY ++S+ V+ + ++ S L I ALKKLCNHP L+
Sbjct: 539 LPPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLSESSPHLLCIGALKKLCNHPCLL 598
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV---ELSGKMHVLARLLGHL 531
+ T K ++ ED R ++ G + + E SGK+ VL++LL +
Sbjct: 599 FSTAKEKESSSSCNEDEER----SLYKGLLNVFPADYNPLLFTEEESGKLQVLSKLLAVI 654
Query: 532 RQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF 590
+ R +++VLVSNYTQTL++ ++C+ Y + RLDG T IS+RQ++V+ FN ++F
Sbjct: 655 HELRPTEKVVLVSNYTQTLNILQEVCKRHGYAHTRLDGQTPISQRQQIVDGFNSKYSSDF 714
Query: 591 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 650
+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTI
Sbjct: 715 IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTI 774
Query: 651 EEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
EEK+YQRQ+SK+GL + S Q S E+L++LFT H++ H+ + C
Sbjct: 775 EEKIYQRQISKQGLSGAVVDLSKTSEHIQ---FSVEELKNLFTLHENSDCVTHDLLDC-- 829
Query: 711 CQNYDDGAESIGEGDETNSANKN 733
+ GE D T + +N
Sbjct: 830 --------DCTGEKDRTGDSLEN 844
>gi|443926309|gb|ELU45006.1| DNA repair and recombination protein RAD54 [Rhizoctonia solani AG-1
IA]
Length = 834
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 271/620 (43%), Positives = 360/620 (58%), Gaps = 63/620 (10%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
+E Q VP+ +DP L + LRPHQ EGV+F++ C +G+ +GCI+AD+MGLGK
Sbjct: 228 KEAQATVAPKVPVVIDPKLGKILRPHQIEGVKFLYRCTTGM-TVDNQYGCIMADEMGLGK 286
Query: 222 TLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRV-QLIAL-CE 277
TLQ I L++TLL Q GK ++K II P SLV NW E+ KW+G + A+
Sbjct: 287 TLQCITLMWTLLKQSPRGAGKGTIEKCIIACPASLVKNWANELVKWLGDSAPKTFAIDGT 346
Query: 278 STRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
T+ D+++ + + +L V+IVSYET R + + E L++CDE HRLKN
Sbjct: 347 GTKADLIANVRRWVQAKGRHVTLPVMIVSYETLRTLCEELAGCE-IGLMLCDEGHRLKNS 405
Query: 335 QTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
+ LT + NDL E+F+++NF N LG FR+ +E +II G
Sbjct: 406 ENLTFKTLNELNCKRRVILSGTPIQNDLSEYFSLLNFANKDYLGTKNEFRKNFENAIIRG 465
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
R+ AT++EK+ I + ELS +V FI+ LP K +VV C L+PLQ LY
Sbjct: 466 RDADATDKEKEASIAKLRELSGRVQPFII----------LPVKYEQVVFCALSPLQLALY 515
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
HFI S VK+ + Q L I LKKLCNHP L+ D G ED
Sbjct: 516 RHFITSPEVKKLLRGVGSQP--LKAIGQLKKLCNHPALL-DLPND----IAGSED---IL 565
Query: 496 PPEMFSGRSGSWTGGDGAWV---ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLF 552
PP +G + G G L GK VL R L +R+ T+D+IVL+SNYTQT+DLF
Sbjct: 566 PPGYNAGMLSAGGRGGGNMTPDCSLGGKFVVLERFLDRIRRETNDKIVLISNYTQTMDLF 625
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
+LCR + Y +RLDGT S++KRQKLV+ FNDP EFVFLLSSKAGGCG+NLIG NRL+
Sbjct: 626 EKLCRSKSYGCIRLDGTLSVAKRQKLVDRFNDPEGKEFVFLLSSKAGGCGINLIGANRLI 685
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
LFDPDWNPA+D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ SK+ L + E+
Sbjct: 686 LFDPDWNPASDQQALARVWRDGQKKECFVYRFVSTGTIEEKIFQRQASKQALSSCVVDEK 745
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN----YDDGAESIGEGDE-- 726
D T+ +F S ++LR LF + E HE C RC+N A G+G+
Sbjct: 746 ED---TERHF-SGDELRKLFELRESTLCETHETYKCKRCKNGKQFMKAPAMLYGDGNTWN 801
Query: 727 --TNSANKNDQSDQEVTDIG 744
TN KN+ D ++G
Sbjct: 802 HYTNPELKNNHDDLLRAEVG 821
>gi|345793211|ref|XP_850491.2| PREDICTED: DNA repair and recombination protein RAD54B isoform 8
[Canis lupus familiaris]
Length = 744
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 271/631 (42%), Positives = 372/631 (58%), Gaps = 80/631 (12%)
Query: 150 PPGVDPLVLWQPEEPQN-----DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P + LV+ +P+ G +V + +DP LV LRPHQ+EG+ F++ECV G+
Sbjct: 90 PHAPNSLVMSRPDNNHQWTFNKKGFPVVDVVIDPHLVYHLRPHQKEGIMFLYECVMGM-R 148
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
G G ILAD+MGLGKTLQ I+L++TL CQG + GKP+VKK +IVTP SLV+NW E +
Sbjct: 149 VNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVVKKTLIVTPGSLVNNWRKEFQ 208
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFT-DPCSSLQVLIVSYETF-----RMHSSKFSC 316
KW+G R+++ + D ++ FT P S VLI+SYE ++ + KF
Sbjct: 209 KWLGSERIKIFPV------DQDHKVEEFTRSPFYS--VLIISYEMLLRSLDQIKNVKFG- 259
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
LLICDE HRLKN T +NDL+EFFA+++F NPGI
Sbjct: 260 -----LLICDEGHRLKNSAIKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNPGI 314
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG +++R+ YE II R+P+A+EEEKKLG +R+ EL+ FILRRT +++ +LPP
Sbjct: 315 LGSLSFYRKVYEEPIIISRQPSASEEEKKLGEKRAVELTCLTGLFILRRTQEVINKYLPP 374
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
KI VV C+ LQ ELY ++S+ V+ + S L I ALKKLCNHP L++++
Sbjct: 375 KIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLLGNSPHLICIGALKKLCNHPCLLFNS 434
Query: 478 IKSGNPGTTG--------FEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
IK +T +E + FP P MFS E SGK+ VL
Sbjct: 435 IKEKECSSTWDGKEEKSLYEALLDVFPADYNPLMFSE-------------EESGKLQVLL 481
Query: 526 RLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND 584
+LL + + R +++VLVSNYTQTLD+ ++C+ Y Y RLDG T +S+RQ++V+ FN
Sbjct: 482 KLLAVIHELRPTEKVVLVSNYTQTLDILQEVCKRHGYTYTRLDGQTPVSQRQQIVDSFNS 541
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
++F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR
Sbjct: 542 KYSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKNPVHIYRL 601
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
L+TGTIEEK+YQRQ+SK+ L + S Q S E+L++LFT H+ H+
Sbjct: 602 LTTGTIEEKIYQRQISKQDLSGAVVDLTRTSEHIQ---FSVEELKNLFTLHESSHCVTHD 658
Query: 705 NMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
+ C C DG G+ E ++N Q
Sbjct: 659 LLDC-ECTGDQDGT---GDSLEKFPVSRNCQ 685
>gi|338728445|ref|XP_003365673.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Equus caballus]
Length = 727
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/604 (43%), Positives = 367/604 (60%), Gaps = 76/604 (12%)
Query: 150 PPGVDPLVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P + LV+ +P+ N LV + +DP LV LRPHQ+EG++F++ECV G
Sbjct: 74 PCAPNSLVMLRPDSRHQWMFNKNCFPLVDVVIDPHLVCHLRPHQKEGIRFLYECVMGF-R 132
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
+G ILAD+MGLGKT+Q I+L++TL CQG + GKP++KK +IVTP SLV+NW E +
Sbjct: 133 VNDRYGAILADEMGLGKTIQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQ 192
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFT-DPCSSLQVLIVSYETF-----RMHSSKFSC 316
KW+G R+++ A+ + + I+ FT P S VLI+SYE ++ + KF
Sbjct: 193 KWLGSERIKIFAVGQDHK------IEEFTKSPFYS--VLIISYEMLLRSLDQVKNIKF-- 242
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
DLLICDE HRLKN T +NDL+EFFA+++F NPGI
Sbjct: 243 ----DLLICDEGHRLKNSAVKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNPGI 298
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG + +R+ YE II R+P+A+EEEK+LG R++EL+ FILRRT +++ +LPP
Sbjct: 299 LGPLSSYRKIYEEPIILSRQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYLPP 358
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
KI VV C+ LQ ELY ++S+ V+ + + S L I ALKKLCNHP L++++
Sbjct: 359 KIENVVFCQPAALQIELYRKLLNSRAVRFCLQGLLENSPHLICIGALKKLCNHPCLLFNS 418
Query: 478 IKSGNPGTTG--------FEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
IK +T +E I FP P MF+ E SGK+ VL+
Sbjct: 419 IKEKECSSTWDKNEERSLYEGLINVFPADYNPFMFTE-------------EESGKLQVLS 465
Query: 526 RLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND 584
+LL +R+ +++VLVSNYTQTL++ ++C+ Y Y RLDG T +S+RQ++V+ FN
Sbjct: 466 KLLAVIRELCPAEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPVSQRQQIVDSFNS 525
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
++F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR
Sbjct: 526 KYSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRL 585
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
L+TGTIEEK+YQRQ+SK+ L + S TQ S E+L++LFT H+ H+
Sbjct: 586 LTTGTIEEKIYQRQISKQDLSGAVVDLTKTSEHTQ---FSVEELKNLFTLHESSHCVTHD 642
Query: 705 NMHC 708
+ C
Sbjct: 643 LLDC 646
>gi|194214970|ref|XP_001915028.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Equus caballus]
Length = 910
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/578 (44%), Positives = 358/578 (61%), Gaps = 71/578 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG++F++ECV G +G ILAD+MGLGKT+Q I+L++
Sbjct: 283 LVDVVIDPHLVCHLRPHQKEGIRFLYECVMGF-RVNDRYGAILADEMGLGKTIQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ A+ + + I+
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFAVGQDHK------IE 395
Query: 289 SFT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
FT P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFTKSPFYS--VLIISYEMLLRSLDQVKNIKF------DLLICDEGHRLKNSAVKTTAAL 447
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL+EFFA+++F NPGILG + +R+ YE II R+P+A+EE
Sbjct: 448 ISLSCEKRVILTGTPVQNDLQEFFALIDFVNPGILGPLSSYRKIYEEPIILSRQPSASEE 507
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EK+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+
Sbjct: 508 EKELGERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCQPAALQIELYRKLLNSRA 567
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFF 495
V+ + + S L I ALKKLCNHP L++++IK +T +E I F
Sbjct: 568 VRFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTWDKNEERSLYEGLINVF 627
Query: 496 P----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD-DRIVLVSNYTQTLD 550
P P MF+ E SGK+ VL++LL +R+ +++VLVSNYTQTL+
Sbjct: 628 PADYNPFMFTE-------------EESGKLQVLSKLLAVIRELCPAEKVVLVSNYTQTLN 674
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ ++C+ Y Y RLDG T +S+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+
Sbjct: 675 ILQEVCKRHGYAYTRLDGQTPVSQRQQIVDSFNSKYSSDFIFLLSSKAGGVGLNLIGGSH 734
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+ L +
Sbjct: 735 LILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVD 794
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S TQ S E+L++LFT H+ H+ + C
Sbjct: 795 LTKTSEHTQ---FSVEELKNLFTLHESSHCVTHDLLDC 829
>gi|300794189|ref|NP_001179884.1| DNA repair and recombination protein RAD54B [Bos taurus]
gi|296480441|tpg|DAA22556.1| TPA: RAD54 homolog B [Bos taurus]
Length = 909
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 257/577 (44%), Positives = 357/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV +LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 VVDVVIDPHLVYYLRPHQKEGITFLYECVMGM-RVNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDS 289
TL CQG + GKP+VKK +IVTP SLV+NW+ E +KW+G ++ I + +D V +
Sbjct: 342 TLQCQGPYGGKPIVKKTLIVTPGSLVNNWKKEFQKWLG--IERIKIFTVDQDHKV---EE 396
Query: 290 FT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
FT P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 397 FTKSPFYS--VLIISYEMLLRSLDQIKNVKF------DLLICDEGHRLKNSTIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFF +++F NPGILG + +R+ YE II R+P+A+EEE
Sbjct: 449 SLSCEKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
++LG +R++EL+ FILRRT +++ +LPPKI VV C+ LQ LY ++S+ V
Sbjct: 509 RELGEQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + + L I ALKKLCNHP L++ +IK +T +E + FP
Sbjct: 569 RFCLQGLLENTSHLICIGALKKLCNHPCLLFGSIKEKESNSTWDESEERNLYEGLMNVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P MF+ E SGK+ VL++LL +R+ R +++VLVSNYT+TLD+
Sbjct: 629 ADYNPIMFTE-------------EESGKLQVLSKLLAVIRELRPAEKVVLVSNYTRTLDI 675
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+ L
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHL 735
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDL 795
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 SKTSDHIQ---FSVEELKNLFTLHESSHCVTHDLLDC 829
>gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1045
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/609 (42%), Positives = 359/609 (58%), Gaps = 62/609 (10%)
Query: 135 PRTVENNVIEENFTLPPGVDP-----LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQ 188
P+T + + E L P DP +VL++ + ++ G L V + VDP++ LRPHQ
Sbjct: 310 PKTGPSGIRAE---LKPLHDPDREGAVVLFRADYKRDANGRLQVSVVVDPVIGDKLRPHQ 366
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAII 248
R GV+F+F+C++G G HG ILAD+MGLGKT+Q++A +YT L QG G P +K ++
Sbjct: 367 RAGVRFLFDCITGE-RMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGVPTARKCLV 425
Query: 249 VTPTSLVSNWEAEIKKWVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYE 305
VTP+SLV NW E KW+G G V+ ++ EST D ++S D D VL++SY+
Sbjct: 426 VTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGD------VLVISYD 479
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
R + ++ S S +L++CDE HRLKN + T + NDL EF
Sbjct: 480 QLRKYIARISTLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEF 539
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
AMV F NPGILG F R +E ++ GR+P E + LG +R+ LS +FILRR
Sbjct: 540 HAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRR 599
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T ++ ++LPPK+ V +L LQS Y K + E+ L I+AL+K
Sbjct: 600 TQSINESYLPPKVDVTVFVRLGELQSVAYE--------KLSDLVESSSCPPLVLISALRK 651
Query: 467 LCNHPKLIYDTI--KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVL 524
LCNH L Y+ + S G R P + S T + A GKMH +
Sbjct: 652 LCNHMDLFYEAVLNSSKEEVREG-----RGLPKSVLPKGYKSGTLSEAA----GGKMHFV 702
Query: 525 ARLLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
+ +L LR D D++V+VSN+TQTLD+ A +CR++R + +LDG+ + +RQ++V+ FN
Sbjct: 703 SLMLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFN 762
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRVFIYR
Sbjct: 763 VPESQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYR 822
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
LS G+IEEK+YQRQ+SK+GL + ++DS + E+LR LF + D RS+ H
Sbjct: 823 LLSAGSIEEKIYQRQVSKQGLSANVVDMKSDSK----QHFTLEELRSLFCYRKDTRSDTH 878
Query: 704 ENMHCTRCQ 712
+ +HCT C+
Sbjct: 879 DLLHCTNCE 887
>gi|358054278|dbj|GAA99204.1| hypothetical protein E5Q_05897 [Mixia osmundae IAM 14324]
Length = 911
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/583 (44%), Positives = 357/583 (61%), Gaps = 65/583 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F+++ +G++ + G GCI+AD+MGLGKTLQ I LL+T
Sbjct: 314 VPVVLDPRLGKVLRPHQVEGVKFLYKAATGMI-SEGAFGCIMADEMGLGKTLQCITLLFT 372
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCEST-RDDVVSGID 288
LL Q GK ++KAI+V P SLV NW E KW+G G + +A+ S + D+++ +
Sbjct: 373 LLKQSPKAGKGTIEKAIVVCPASLVRNWANEFVKWLGPGTINPLAIDGSMPKPDLMAALR 432
Query: 289 SFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ V+IVSYET R +++ + L++CDEAHRLKN LT
Sbjct: 433 QWVSAHGRAICQPVIIVSYETLRSLTAELG-NAPIGLILCDEAHRLKNATNLTYTELDKI 491
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF PG LG A F++ YE +I+ GR AT++E++
Sbjct: 492 NVQRRVLLTGTPVQNDLTEYFSLLNFAIPGKLGARADFKKNYELAIVRGRMSEATDKERE 551
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
E+ EL++ VNQF++RRTN LL+ +LP K VV C L+PLQ +LY I KR
Sbjct: 552 RCQEKLKELTSLVNQFVIRRTNDLLTKYLPVKYEHVVFCNLSPLQLQLYQKLI-----KR 606
Query: 447 AISEETKQ-SKILAYITALKKLCNHPKLI-------YDTIKSGNPGTTGFEDCIRFFPPE 498
++ K + L I +KLCNHP+L+ +D K+ P GF+
Sbjct: 607 PEEKDAKGGTSALGAIQRAQKLCNHPQLLDAYFRDNFDDFKNDMP--DGFDP-------- 656
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
F R + E SGK VL R L +R T+D+IVL+SNYT+TLD+F ++ R+
Sbjct: 657 -FDRRRSVVS-------EYSGKTLVLDRFLEKMRAETNDKIVLISNYTETLDVFEKMLRD 708
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R+Y Y RL+G+TSI KRQKLV+ FN+P EFVFLLSSKAGGCG+NLIG NRL+LFDPDW
Sbjct: 709 RKYGYFRLEGSTSIKKRQKLVDEFNNPEGKEFVFLLSSKAGGCGINLIGANRLILFDPDW 768
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++QRQ K+ L + + D+
Sbjct: 769 NPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQAHKQALSSCVVDAKEDAE-- 826
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S +DL+ LF + + SE H+ C RC+ DG +SI
Sbjct: 827 --RHFSRDDLKQLFAYKANTISETHDTFKCKRCK---DGRQSI 864
>gi|313233227|emb|CBY24342.1| unnamed protein product [Oikopleura dioica]
Length = 1202
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/568 (44%), Positives = 346/568 (60%), Gaps = 53/568 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L R LRPHQR GV+F+++CV+G G +GCI+ADDMGLGKTLQ +AL++T
Sbjct: 145 VHVLLDPRLSRVLRPHQRAGVKFLYDCVTGK-AIEGYNGCIMADDMGLGKTLQCVALIWT 203
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
L+ QG D KP+ I+++P+SLV NW+ E KKW+G V +A+ + D+ +++F
Sbjct: 204 LVRQGPDCKPIAPLTIVISPSSLVKNWQNEFKKWLGDEVSTVAIDGGGKKDIDKKLEAF- 262
Query: 292 DPCSS-------LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
CS VL +SYETFR+H+ K L+ICDE HRLKN + T
Sbjct: 263 --CSQQILGRVHTPVLFISYETFRLHA-KVLNKRPIGLMICDEGHRLKNPDSQTYLALDK 319
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+NDL E++++V+F N +LG +A FR+ YE I+ R+ T++EK
Sbjct: 320 LECPRRVLLSGTPIQNDLLEYYSLVHFVNRNLLGTSADFRKEYENPILKSRDADCTDKEK 379
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G ++ +L VN+ ++RRTN +LS +LPPK+ V+ L Q Y F+ K K
Sbjct: 380 QKGQDKIKKLLEVVNRCMIRRTNDILSKYLPPKVEMVITIPLIGNQKASYIKFVKEK--K 437
Query: 446 RAISEETKQS-KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
R + E Q L ITALKKLCNHP L+Y I NP + + F P+ F
Sbjct: 438 RLLDTEGMQGPSSLQAITALKKLCNHPALVYPLI--NNPEYKFLQPYYKDFKPDKFDP-- 493
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
LSGK +L +L + TDD+ VLVSNYTQTLD +LC+ R Y Y+
Sbjct: 494 -----------TLSGKFLLLDLILAITKMHTDDKFVLVSNYTQTLDTCQELCKLRGYGYV 542
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDGT +I KR KLV FN P +++VF+LSSKAGGCGLNLIG NRL++FDPDWNPAND
Sbjct: 543 RLDGTMAIKKRSKLVAEFNSPESSDYVFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDD 602
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQKKR FIYR ++ GTIEEK+ QRQ+ K+ L V+ Q A + S
Sbjct: 603 QAMARVWRDGQKKRCFIYRLVAAGTIEEKMLQRQLHKKALSGVVVDAQEADDARR---FS 659
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
+ D++++F++ + S IHE++ C RCQ
Sbjct: 660 STDMKEIFSY-KETSSSIHESLKCKRCQ 686
>gi|426235834|ref|XP_004011884.1| PREDICTED: DNA repair and recombination protein RAD54B [Ovis aries]
Length = 909
Score = 461 bits (1185), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/578 (44%), Positives = 356/578 (61%), Gaps = 71/578 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV +LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 VVDVVIDPHLVYYLRPHQKEGIIFLYECVMGM-RVNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGID 288
TL CQG + G+P+VKK +IVTP SLV+NW E +KW+G R+++ + D I+
Sbjct: 342 TLQCQGPYGGRPVVKKTLIVTPGSLVNNWRKEFQKWLGIERIKIFTV------DQDHKIE 395
Query: 289 SFT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQT------ 336
FT P S VLI+SYE ++ S KF DLLICDE HRLKN
Sbjct: 396 EFTKSPFYS--VLIISYEMLLRSLDQIKSIKF------DLLICDEGHRLKNSTIKATTAL 447
Query: 337 ----------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
LT +NDL+EFF +++F NPGILG + +R+ YE II R+P+A+EE
Sbjct: 448 ISLSCEKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEE 507
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E++LG +R++EL+ FILRRT +++ +LPPKI VV C+ LQ LY ++S+
Sbjct: 508 ERELGEQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQA 567
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFF 495
V+ + + + L I ALKKLCNHP L++ ++K +T +E I F
Sbjct: 568 VRFCLQGLLENTSHLICIGALKKLCNHPCLLFGSVKEKESNSTWDESEERSLYEGLINVF 627
Query: 496 P----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLD 550
P P MF+ E SGK+ VL++LL +R+ R +++VLVSNYT+TLD
Sbjct: 628 PADYNPTMFTE-------------EESGKLQVLSKLLAVIRELRPAEKVVLVSNYTRTLD 674
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ ++C+ Y Y RLDG T IS+RQK+V+ FN +F+FLLSSKAGG GLNLIGG+
Sbjct: 675 ILQEVCKRHGYAYTRLDGQTPISQRQKIVDGFNSKYSPDFIFLLSSKAGGVGLNLIGGSH 734
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 735 LILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVD 794
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 795 LSKTSDHIQ---FSVEELKNLFTLHESSHCVTHDLLDC 829
>gi|154277928|ref|XP_001539795.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
NAm1]
gi|150413380|gb|EDN08763.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
NAm1]
Length = 684
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/604 (44%), Positives = 350/604 (57%), Gaps = 95/604 (15%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT---- 222
DG VP+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKT
Sbjct: 76 DGRPKVPVVIDPKLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTVGSN 134
Query: 223 ---------------LQSIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
LQ I LL+TLL Q + GK ++K II P++LV NW E KW+
Sbjct: 135 EFSRWSHGAKYLYFQLQCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFVKWL 194
Query: 267 G----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC 316
G G+ + L R VS S P VLIVSYET R++ +
Sbjct: 195 GEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVRP-----VLIVSYETLRLYVDELK- 248
Query: 317 SESCDLLICDEAHRLKN--DQTLTN-----------------RNDLEEFFAMVNFTNPGI 357
LL+CDE HRLKN QT T +NDL E+F+++NF NP I
Sbjct: 249 DTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNI 308
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG F + YE I+ GR+ ++E++K G E +EL VN+FI+RRTN +LS +LP
Sbjct: 309 LGTRNEFHKKYEMPILRGRDADGSDEDRKRGDECVTELLNVVNKFIIRRTNDILSKYLPV 368
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K VV C+L P Q++LYNHFI S ++K + K S+ L I LKKLCNHP L+
Sbjct: 369 KYEHVVFCRLAPFQTDLYNHFIQSPDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--N 424
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
+ + PG+ + P + +V L + G R T+D
Sbjct: 425 LGADLPGSE------QILPDD---------------YVSLESR--------GRDRDDTND 455
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+IVL+SNYTQTLDLF +LCR RRY LRLDGT +++KRQKLV+ FNDP+ EFVFLLSSK
Sbjct: 456 KIVLISNYTQTLDLFERLCRTRRYGCLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSK 515
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCG+NLIG NRLVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++QR
Sbjct: 516 AGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 575
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG 717
Q K+ L + DS+ S + LR+LF F + RS+ H+ C RC+ DG
Sbjct: 576 QSHKQSLSSCV----VDSAEDVERHFSLDSLRELFQFKPETRSDTHDTFKCKRCR--PDG 629
Query: 718 AESI 721
+ I
Sbjct: 630 TQHI 633
>gi|448525548|ref|XP_003869143.1| Rad54 protein [Candida orthopsilosis Co 90-125]
gi|380353496|emb|CCG23006.1| Rad54 protein [Candida orthopsilosis]
Length = 836
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/587 (43%), Positives = 352/587 (59%), Gaps = 51/587 (8%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C +GL++ GCI+AD+MGLGKTLQ + L++T
Sbjct: 233 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKA-KGCIMADEMGLGKTLQCLTLMWT 291
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
LL Q GK ++K IIV P+SLV NW EI KW+G V L L + + + +
Sbjct: 292 LLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGV-LTPLAIDGKSTKSNDLGAAL 350
Query: 292 DPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
S+ Q VLI+SYET R + K + +E L++ DE HRLKN ++LT
Sbjct: 351 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGESLTFTALNS 409
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+NDL E+F+++NF NPG LG FR+ +E +I+ GR+ AT++E+
Sbjct: 410 LRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFENAILRGRDADATDKER 469
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G + ELS V++FI+RRTN +LS +LP K V+ L+P+Q LYNHFI S +K
Sbjct: 470 EKGDAKLLELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKSLYNHFITSPEIK 529
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
+ + Q L I LKKLCNH E C P + S +
Sbjct: 530 KLLKGIGSQP--LKAIGMLKKLCNH--------PDLLDLPDDLEGCENLIPEDYESSITA 579
Query: 506 SWTGGD-GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
+ + W SGK +L R L + + TDD+IVL+SNYTQTLDL ++CR ++Y L
Sbjct: 580 TGRKREVQTW--FSGKFLILERFLHKIHRETDDKIVLISNYTQTLDLIEKMCRNKKYGSL 637
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDGT +I+KRQKLV+ FNDP+ +EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA+D+
Sbjct: 638 RLDGTMNINKRQKLVDRFNDPNGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQ 697
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S
Sbjct: 698 QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE----RLFS 753
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG----AESIGEGDET 727
++L+ LF + + + H+ +C RC N + G A ++ GD T
Sbjct: 754 ADNLKQLFMYQPNTECDTHDTYNCKRC-NKEKGQFIKAPAMLYGDAT 799
>gi|410987472|ref|XP_004000025.1| PREDICTED: DNA repair and recombination protein RAD54B [Felis
catus]
Length = 911
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/590 (43%), Positives = 360/590 (61%), Gaps = 69/590 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV LRPHQ+EG+ F++ECV G+ +G G ILAD+MGLGKTLQ I+L++
Sbjct: 284 IVDVVIDPYLVYHLRPHQKEGILFLYECVMGM-RVSGRCGAILADEMGLGKTLQCISLIW 342
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ + + + + +
Sbjct: 343 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDHKVE-----E 397
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 398 FIKSPFYS--VLIISYEMLLRSLDQIKNVKF------DLLICDEGHRLKNSAIKTTTALI 449
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II R+P+A+EEE
Sbjct: 450 SLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSRQPSASEEE 509
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG +R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 510 KELGEKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAV 569
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + S L I ALKKLCNHP L++++IK +T +E + FP
Sbjct: 570 RFCLQGLLGDSPHLICIGALKKLCNHPCLLFNSIKGRECSSTWDENEERSLYEGLVNVFP 629
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P MF+ E SGK+ VL +LL +R+ R +++VLVSNYTQTL++
Sbjct: 630 ADYNPLMFTE-------------EESGKLQVLLKLLAVIRELRPTEKVVLVSNYTQTLNI 676
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++CR Y + RLDG T +S+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+ L
Sbjct: 677 LQEVCRRHGYAFTRLDGQTPVSQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHL 736
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+ L +
Sbjct: 737 ILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDL 796
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S Q S E+L++LFT H+ H+ + C + D +S+
Sbjct: 797 TKTSEHIQ---FSVEELKNLFTLHESSHCVTHDLLDCECTGDKDHTGDSL 843
>gi|367011473|ref|XP_003680237.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
gi|359747896|emb|CCE91026.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
Length = 869
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/599 (42%), Positives = 347/599 (57%), Gaps = 81/599 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL-----------NAA-------------- 206
+P+ +DP L + LRPHQ EGV+F++ CV+GL+ N +
Sbjct: 237 IPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDQETVKNGSAEVGTEVGKEVVIN 296
Query: 207 -GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 265
G +GCI+AD MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW E+ KW
Sbjct: 297 RGAYGCIMADAMGLGKTLQCIALMWTLLRQGPQGKKLIDKCIIVCPSSLVNNWANELVKW 356
Query: 266 VGGRV---------QLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC 316
+G V + ++ ES R + + P VLI+SYET R + +
Sbjct: 357 LGPNVLTPLAIDGKKTTSVSESIRVWAQAQGRNIVKP-----VLIISYETLRRNVEQLKN 411
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
+ L++ DE HRLKN +LT +NDL E+FA++NF+NPG+
Sbjct: 412 TR-VGLMLADEGHRLKNADSLTFTSLDSIDCPRRVILSGTPIQNDLSEYFALLNFSNPGL 470
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG + FR+ +E I+ R+ AT+++ K G E+ +LS V++FI+RR N +L+ +LP
Sbjct: 471 LGTRSDFRKNFENPILLSRDADATDDQIKKGQEQLQKLSYVVSKFIIRRANDILAKYLPC 530
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K V+ L P Q +LY + S+ + + + S+ L I LKKLCNHP L+
Sbjct: 531 KYEHVIFVNLRPFQKDLYERSVKSREITKMVKGNEAGSQPLKAIGQLKKLCNHPDLL--- 587
Query: 478 IKSGNPGTTGFEDCIRFFP----PEMFSGRSGSWTG-GDGAWVELSGKMHVLARLLGHLR 532
FE+ + P+ + S S T E SGK +L R L +R
Sbjct: 588 ---------NFEEDLDNLDGLNIPDDYEIPSSSNTNFRRNVQTEFSGKFAILERFLKTIR 638
Query: 533 QRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVF 592
++DD+IVL+SNYTQTLDL +LCR + Y LRLDGT +I+KRQKLV+ FNDP EF+F
Sbjct: 639 SQSDDKIVLISNYTQTLDLIERLCRHKHYASLRLDGTMNINKRQKLVDRFNDPEGQEFIF 698
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STGTIEE
Sbjct: 699 LLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEE 758
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
K+YQRQ K L + Q D +T++LR LF ++ + + HE HC RC
Sbjct: 759 KIYQRQSMKMSLSSCVVDAQEDVE----RLFTTDNLRMLFKYNGNTICDTHETYHCKRC 813
>gi|393216995|gb|EJD02485.1| DNA repair protein, SNF2 family [Fomitiporia mediterranea MF3/22]
Length = 814
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/617 (43%), Positives = 356/617 (57%), Gaps = 69/617 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L + LRPHQ EGV+F++ C +G+ +GCI+AD+MGLGKTLQ IAL+YT
Sbjct: 210 VAVVLDPKLSKVLRPHQIEGVKFLYRCTTGM-TIENQYGCIMADEMGLGKTLQCIALMYT 268
Query: 232 LLCQGFDG-KPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q +P + K II P+SLV NW E+ KW+G G+ L E
Sbjct: 269 LLKQSPRAVRPTIDKCIIACPSSLVRNWANELTKWLGPEAPGSLAVDGKGTKAELIEKVA 328
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
V + + T P V+IVSYET R S++ + + LL+CDE HRLKN +LT +
Sbjct: 329 RWVAASGKTVTQP-----VMIVSYETLRT-LSEYLANCTIGLLLCDEGHRLKNSDSLTFQ 382
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL E+F+++NF NP LG FR+ +E +II GR+ A+
Sbjct: 383 ALNALNVKRRVILSGTPIQNDLSEYFSLLNFANPNYLGSKGDFRKNFENAIIRGRDADAS 442
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
++ K + EL + V FI+RRTN LLS +LP K VV C L+ Q LY FI S
Sbjct: 443 DQVKAACENKLKELGSMVTPFIIRRTNDLLSKYLPVKYEHVVFCGLSDFQLALYRLFITS 502
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF- 500
+K + Q L I LKKLCNHP+L+ + + G+ G PE F
Sbjct: 503 PEIKALLRGTNSQP--LKAINILKKLCNHPELL--DLPNDLQGSEGL-------IPEGFV 551
Query: 501 -SGRSGSWTG-GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
+G++ G G + GK VL R L +R T D+IVL+SNYTQTLDLF +LCR
Sbjct: 552 GAGQTARERGRNQGVRCDWGGKFLVLERFLHRIRTETGDKIVLISNYTQTLDLFEKLCRS 611
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
+ Y RLDGT ++SKRQKLV+ FNDP++ EFVFLLSSKAGGCG+NLIG NRL+LFDPDW
Sbjct: 612 KGYGCFRLDGTMTVSKRQKLVDQFNDPNRPEFVFLLSSKAGGCGINLIGANRLILFDPDW 671
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ K+ L + D++
Sbjct: 672 NPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQAQKQALSSAV----VDATED 727
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG-----AESIGEGDE------T 727
S + LR LFTF ++ + H+ C RC+ DG ++++ GD T
Sbjct: 728 AERHFSVDMLRQLFTFKENTSCDTHDTFKCKRCK---DGKQIIRSQALLYGDASTWNHYT 784
Query: 728 NSANKNDQSDQEVTDIG 744
N KN+ D ++G
Sbjct: 785 NPELKNNHDDLLRAEVG 801
>gi|297683312|ref|XP_002819327.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Pongo abelii]
Length = 910
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/577 (44%), Positives = 354/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
FT VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFTKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTYDKNEEKSLYKGLLSVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHL 735
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 795
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLEC 829
>gi|154338237|ref|XP_001565343.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1126
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 287/768 (37%), Positives = 408/768 (53%), Gaps = 93/768 (12%)
Query: 91 KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLP 150
KP S G GN+ + R+R P +V + R P+ +N +I L
Sbjct: 344 KPEMSFGISLGNNSAFASILFRRR--PKDGETGFVVPVAGR---PKMGKNGIIMNE--LR 396
Query: 151 PGVDP-----LVLWQPEEPQN-DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P DP +VL++ + ++ G V + VDP++ LRPHQ GV+F+F+C++G
Sbjct: 397 PLHDPDREKAVVLFRADYKRDLHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGE-R 455
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G HG ILAD+MGLGKT+Q++A +YT L QG G+P +K ++VTP+SLV NW E K
Sbjct: 456 MLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDK 515
Query: 265 WVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
W+G G V+ A+ EST D ++S D D VL++SY+ R + + S +
Sbjct: 516 WLGEGAVKHFAISESTPKGDRIISRFDGDGD------VLVISYDQLRKYIDRLSRLRFVE 569
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + T + NDL EF AMVNF NPGILG+
Sbjct: 570 LVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRD 629
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F R +E + GR+P + K LG +R+ LS +FILRRT ++ ++LPPK+
Sbjct: 630 LFTRVFEEPVSLGRDPDCPDHLKSLGRDRAHYLSMLTQRFILRRTQSINESYLPPKVDVT 689
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGN 482
V +L Q + Y K A E+ + L I+AL+KLCNH L +D + +
Sbjct: 690 VFVRLGAKQEQAYQ--------KLADIVESAECTPLVLISALRKLCNHMDLFHDAVHLSH 741
Query: 483 PGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA--------------WVELSGKMHVLARLL 528
G + GRS + G ++ KMH ++ +L
Sbjct: 742 QVGNGIGASAQQQQAGRRRGRSSAADEPQGIPFSVLPKGFKPGSLSMDYGSKMHFVSLVL 801
Query: 529 GHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
LR+ + D++V+VSN+TQTLD+ A LC +R Y +LDG+T I KRQ+LV++FN P
Sbjct: 802 DELRENGEHDKLVIVSNFTQTLDIIAALCNSKRIAYFQLDGSTPIKKRQQLVDYFNVPDS 861
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRVFIYR LST
Sbjct: 862 QEVVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLST 921
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK+YQRQ+SK+GL + Q DS + E+L+ LF + D + H+ +
Sbjct: 922 GTIEEKIYQRQVSKQGLSANVVDMQEDSK----QHFTLEELKSLFKYKVDTLCDTHDLLG 977
Query: 708 CTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPL 767
CT C+ AE + D + + + ++ + +G K+ P
Sbjct: 978 CTSCE----AAEPLATSDRGSRSKQAEELKMQFRKVG--------------QPKKKSGPR 1019
Query: 768 EEDLNNWGH-----HFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVP 810
++L W H F SV A+ + A ++F+F ++ D +P
Sbjct: 1020 MDELKAWRHISSVASFNLDSVTRAVAR-HAPSLLSFLFADERDNTKMP 1066
>gi|340058717|emb|CCC53077.1| putative DNA repair and recombination protein RAD54 [Trypanosoma
vivax Y486]
Length = 1024
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 272/693 (39%), Positives = 385/693 (55%), Gaps = 82/693 (11%)
Query: 146 NFTLPPGVDP-----LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECV 199
N L P DP + L+ ++ G L V + VDP++ LRPHQR GV+F+F+C+
Sbjct: 313 NAELKPLHDPEREGAVTLFHAHYKRDVNGRLQVSVVVDPIIGDKLRPHQRVGVKFLFDCI 372
Query: 200 SGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWE 259
+G G HG ILAD+MGLGKT+Q++A +YT L QG G P +KA+IVTP+SLV NW
Sbjct: 373 TGE-RMPGYHGAILADEMGLGKTIQTVATVYTCLRQGKHGTPTARKALIVTPSSLVKNWC 431
Query: 260 AEIKKWVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC 316
E KW+G G V+ A+ EST D ++S + D VL++SY+ R + S+ S
Sbjct: 432 NEFDKWLGQGAVKYFAISESTPKGDRIISRFEGEGD------VLVISYDQLRKYISRIST 485
Query: 317 SESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGI 357
+S +L++CDE HRLKN + T + NDL EF AMV F NPGI
Sbjct: 486 IKSVELVVCDEGHRLKNAEVKTTKSVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGI 545
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG F R +E + GR+P E + LG +R+ LS +FILRRT ++ ++LPP
Sbjct: 546 LGSRDVFARVFEEPVTLGRDPDCPEHLRSLGADRAHYLSNLTQRFILRRTQSINESYLPP 605
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K+ V +L +Q Y A ++ Q L I+AL+KLCNH L ++
Sbjct: 606 KVDLTVFVRLGAMQRTTYESL--------ANLVDSSQCTPLVLISALRKLCNHMDLFHEA 657
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD- 536
+ + + + P+ F + G+ + G+ KM ++ +L LR+ D
Sbjct: 658 VLNSRKEGDKQQGIPKSVLPKGF--KLGTLSEATGS------KMQFVSLMLDELRKNGDR 709
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSS 596
D++V+VSN+TQTLD+ A +CR + + +LDG+ I KRQ++V+ FN P E VFLLSS
Sbjct: 710 DKLVIVSNFTQTLDVIAVMCRAKNVSFFQLDGSMPIKKRQEVVDRFNIPGSQEIVFLLSS 769
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
KAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRV+IYR LSTG+IEEK+YQ
Sbjct: 770 KAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVYIYRLLSTGSIEEKIYQ 829
Query: 657 RQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD 716
RQ+SK+GL + +TDS + ++LR LF + D SE H+ ++CT C+
Sbjct: 830 RQVSKQGLSANVVDMKTDSK----QHFTLDELRSLFRYRGDTTSETHDLLNCTNCEAV-- 883
Query: 717 GAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGH 776
+ G G N ++EV K + + G P ++L W H
Sbjct: 884 AQRAAGRGGALN--------EREVP------------MKFRRVGGKSGGPRMDELKGWRH 923
Query: 777 HFYSMSVP-DAILQASAG---DEVTFVFTNQVD 805
+ P D +L+A A D +F+F ++ D
Sbjct: 924 FENGKTFPLDKVLRAIASQSPDLCSFIFADERD 956
>gi|440906247|gb|ELR56532.1| DNA repair and recombination protein RAD54B [Bos grunniens mutus]
Length = 911
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/579 (44%), Positives = 354/579 (61%), Gaps = 71/579 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV +LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 VVDVVIDPHLVYYLRPHQKEGITFLYECVMGM-RVNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDS 289
TL CQG + GKP+VKK +IVTP SLV+NW+ E +KW+G ++ I + +D V +
Sbjct: 342 TLQCQGPYGGKPIVKKTLIVTPGSLVNNWKKEFQKWLG--IERIKIFTVDQDHKV---EE 396
Query: 290 FT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
FT P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 397 FTKSPFYS--VLIISYEMLLRSLDQIKNVKF------DLLICDEGHRLKNSTIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFF +++F NPGILG + +R+ YE II R+P+A+EEE
Sbjct: 449 SLSCEKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
++LG +R++EL+ FILRRT +++ +LPPKI VV C+ LQ LY ++S+ V
Sbjct: 509 RELGEQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + + L I ALKKLCNHP L++ +IK +T +E + FP
Sbjct: 569 RFCLQGLLENTSHLICIGALKKLCNHPCLLFGSIKEKESNSTWDESEERNLYEGLMNVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLG---HLRQRTDDRIVLVSNYTQTL 549
P MF+ E SGK+ VL++LL LR ++VLVSNYT+TL
Sbjct: 629 ADYNPIMFTE-------------EESGKLQVLSKLLAVIRELRPEVRGQVVLVSNYTRTL 675
Query: 550 DLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGN 609
D+ ++C+ Y Y RLDG T IS+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+
Sbjct: 676 DILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGS 735
Query: 610 RLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ 669
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 HLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVI 795
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 DLSKTSDHIQ---FSVEELKNLFTLHESSHCVTHDLLDC 831
>gi|344272964|ref|XP_003408298.1| PREDICTED: DNA repair and recombination protein RAD54B [Loxodonta
africana]
Length = 883
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 277/673 (41%), Positives = 386/673 (57%), Gaps = 94/673 (13%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+ GV F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 256 LVDVVIDPHLVCHLRPHQKGGVIFLYECVMGM-RVDGRCGAILADEMGLGKTLQCISLIW 314
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ + D ++
Sbjct: 315 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTV------DQDHKVE 368
Query: 289 SFT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
F P S VLI+SYE ++ + +F DLLICDE HRLKN T
Sbjct: 369 EFIRSPLYS--VLIISYEMLLRSLDQIKNIRF------DLLICDEGHRLKNSAIKTTTAL 420
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EE
Sbjct: 421 ISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKVYEEPIIISREPSASEE 480
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EK LG+ R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++SK
Sbjct: 481 EKNLGVRRAAELTRLTGLFILRRTQEVINKYLPPKIENVVFCQPGALQIELYRKLLNSKA 540
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG--------NPGTTGFEDCIRFF 495
V+ + + S L I ALKKLCNHP L++ +IK N + +E I F
Sbjct: 541 VRFCLQGLLENSPHLICIGALKKLCNHPCLLFRSIKEKECSPTCDENEERSLYEGLINVF 600
Query: 496 P----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLD 550
P P MF+ + SGK+ VL++LL + + R +++VLVSNYT+TLD
Sbjct: 601 PDDYNPLMFTEKE-------------SGKLQVLSKLLEVIHELRPSEKVVLVSNYTKTLD 647
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ ++C+ Y + RLDG T IS+RQ +V+ FN ++F+FLLSSKAGG GLNLIGG+
Sbjct: 648 ILQEVCKRHGYAHTRLDGQTPISQRQHIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSH 707
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 708 LILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVMD 767
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
S Q S E+L++LFT H+ H+ + C + +S+G+ S
Sbjct: 768 LTKTSEHIQ---FSVEELKNLFTLHESSHCATHDLLDCDCTGEKNHTDDSLGKL----SV 820
Query: 731 NKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFY-SMSVPDAILQ 789
++N Q +G + L L S+ L W H +++PD L+
Sbjct: 821 SRNCQ-------LGPHPQKSNSLKPLSMSQ----------LKQWKHFCADHLNLPDPFLE 863
Query: 790 ASAGDEVTFVFTN 802
+ V+F F N
Sbjct: 864 -RIRENVSFFFQN 875
>gi|395333479|gb|EJF65856.1| DNA repair protein, SNF2 family [Dichomitus squalens LYAD-421 SS1]
Length = 813
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 269/612 (43%), Positives = 360/612 (58%), Gaps = 67/612 (10%)
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
+DP L + LRPHQ EGV+F++ C +G++ +GCI+AD+MGLGKTLQ IAL++TLL Q
Sbjct: 213 IDPRLSKVLRPHQVEGVKFLYRCTTGMV-VENQYGCIMADEMGLGKTLQCIALMWTLLKQ 271
Query: 236 G-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRDDVV 284
G+ + K II P+SLV NW E+ KW+G G+ + E V
Sbjct: 272 SPHPGRCTIDKCIIACPSSLVKNWANELVKWLGKDAIAALAIDGKGGKTEMLEKVARWVA 331
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
+ + T P V+IVSYET R ++ + + + LL+CDE HRLKN ++ T +
Sbjct: 332 ASGRNVTQP-----VMIVSYETLRTLTAHLA-NCTIGLLLCDEGHRLKNSESQTFQALNS 385
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
NDL E+F+++NF NP LG FR+ +E +II GR+ AT+ K
Sbjct: 386 LNVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADATDAVK 445
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
++ EL V +FI+RRTN LLS +LP K +VV C+ + LQ LY FI S ++
Sbjct: 446 AECEKKLKELGGIVAKFIIRRTNDLLSKYLPVKYEQVVFCRPSELQLSLYRLFISSPEIQ 505
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG-TTGFEDCIRFFPPEMFSGRS 504
+ K S+ L I LKKLCNHP+L+ PG G E + PE +SG +
Sbjct: 506 ALL--RGKDSQPLKAINILKKLCNHPELL------DLPGDLRGSEKLL----PEDYSG-A 552
Query: 505 GSWTGGDG----AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
GS + G E SGK VL R L + T+D+IVL+SNYTQTLDLF +L R ++
Sbjct: 553 GSSSRDKGRNQIIHCEWSGKFLVLERFLHRIHTETNDKIVLISNYTQTLDLFEKLLRSKK 612
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y Y RLDGT +I+KRQKLV+ FNDPS EF+FLLSSKAGGCG+NLIG NRL+LFDPDWNP
Sbjct: 613 YGYFRLDGTMTINKRQKLVDQFNDPSGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNP 672
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ +K+ L + E+ D
Sbjct: 673 AADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQSLSSAVVDEKEDVE---- 728
Query: 681 NFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD--GAESIGEGDE------TNSANK 732
S + LR LF F+++ E HE C RC+N A ++ GD TN K
Sbjct: 729 RHFSLDSLRKLFLFNENTLCETHETFKCKRCKNGRQFMKAPALLYGDASTWNHFTNGELK 788
Query: 733 NDQSDQEVTDIG 744
N+ D ++G
Sbjct: 789 NNHDDLLRAEVG 800
>gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma
brucei gambiense DAL972]
Length = 1037
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/679 (39%), Positives = 382/679 (56%), Gaps = 75/679 (11%)
Query: 156 LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
+VL+ ++ G L V + VDP++ LRPHQR GV+F+F+C++G G HG ILA
Sbjct: 335 VVLFHAHYKRDVNGRLQVSVVVDPIIGDKLRPHQRIGVKFLFDCITGQ-RMPGYHGAILA 393
Query: 215 DDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLI 273
D+MGLGKT+Q++A +YT L QG G P +K +IVTP+SLV NW E KW+G G V+ +
Sbjct: 394 DEMGLGKTIQTVATVYTCLKQGRYGVPTARKCLIVTPSSLVKNWCNEFDKWLGVGAVKYL 453
Query: 274 ALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
++ EST D ++S D D VL++SY+ R + S+ S +S +L++CDE H+L
Sbjct: 454 SISESTPKGDRIISRFDGDGD------VLVISYDQLRKYISRISTLKSVELVVCDEGHKL 507
Query: 332 KNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN + T + NDL EF AMV F NPGILG F R +E +
Sbjct: 508 KNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPV 567
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
GR+P E + LG +R+ LS +FILRRT ++ ++LPPK+ V +L Q
Sbjct: 568 TLGRDPDCPEHLRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVDLTVFVRLGEKQR 627
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
E Y K + E+ Q L I++L+KLCNH L ++ + S N G I
Sbjct: 628 EAYE--------KISAIVESSQCTPLVLISSLRKLCNHMDLFHEAVVSSNGDQKGKGGGI 679
Query: 493 -RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD-DRIVLVSNYTQTLD 550
+ P+ + + G+ + E+ KM ++ +L L D D++V+VSN+TQTLD
Sbjct: 680 PKSVLPKGY--KVGTLSQ------EVGSKMQFVSLMLDELCSNGDHDKLVIVSNFTQTLD 731
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ A +C+ ++ + +LDG+ I +RQ++V+ FN P+ E VFLLSSKAGG GLNLIG NR
Sbjct: 732 VIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKAGGVGLNLIGANR 791
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+LFDPDWNPAND QA RVWRDGQKKRVFIYR LSTG+IEEK+YQRQ+SK+GL +
Sbjct: 792 LILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQVSKQGLSANVVD 851
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
QTDS + E+LR LF F D SE H+ +HCT C+ + G G + A
Sbjct: 852 MQTDSK----QHFTLEELRSLFRFRSDTDSETHDLLHCTSCEAVMNS----GGGRASGRA 903
Query: 731 NKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVP-DAILQ 789
+Q K + + P ++L W H + P D +++
Sbjct: 904 RLKEQE---------------APMKFRPVTVKKSGPRMDELKGWRHFSQCATFPLDKVIR 948
Query: 790 A---SAGDEVTFVFTNQVD 805
A +A +F+F ++ D
Sbjct: 949 AIATAAPGICSFIFADERD 967
>gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927]
gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1037
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/679 (39%), Positives = 382/679 (56%), Gaps = 75/679 (11%)
Query: 156 LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
+VL+ ++ G L V + VDP++ LRPHQR GV+F+F+C++G G HG ILA
Sbjct: 335 VVLFHAHYKRDVNGRLQVSVVVDPIIGDKLRPHQRIGVKFLFDCITGQ-RMPGYHGAILA 393
Query: 215 DDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLI 273
D+MGLGKT+Q++A +YT L QG G P +K +IVTP+SLV NW E KW+G G V+ +
Sbjct: 394 DEMGLGKTIQTVATVYTCLKQGRYGVPTARKCLIVTPSSLVKNWCNEFDKWLGVGAVKYL 453
Query: 274 ALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
++ EST D ++S D D VL++SY+ R + S+ S +S +L++CDE H+L
Sbjct: 454 SISESTPKGDRIISRFDGDGD------VLVISYDQLRKYISRISTLKSVELVVCDEGHKL 507
Query: 332 KNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN + T + NDL EF AMV F NPGILG F R +E +
Sbjct: 508 KNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPV 567
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
GR+P E + LG +R+ LS +FILRRT ++ ++LPPK+ V +L Q
Sbjct: 568 TLGRDPDCPEHLRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVDLTVFVRLGEKQR 627
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
E Y K + E+ Q L I++L+KLCNH L ++ + S N G I
Sbjct: 628 EAYE--------KISAIVESSQCTPLVLISSLRKLCNHMDLFHEAVVSSNGDQKGKGGGI 679
Query: 493 -RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD-DRIVLVSNYTQTLD 550
+ P+ + + G+ + E+ KM ++ +L L D D++V+VSN+TQTLD
Sbjct: 680 PKSVLPKGY--KVGTLSQ------EVGSKMQFVSLMLDELCSNGDHDKLVIVSNFTQTLD 731
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ A +C+ ++ + +LDG+ I +RQ++V+ FN P+ E VFLLSSKAGG GLNLIG NR
Sbjct: 732 VIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKAGGVGLNLIGANR 791
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+LFDPDWNPAND QA RVWRDGQKKRVFIYR LSTG+IEEK+YQRQ+SK+GL +
Sbjct: 792 LILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQVSKQGLSANVVD 851
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
QTDS + E+LR LF F D SE H+ +HCT C+ + G G + A
Sbjct: 852 MQTDSK----QHFTLEELRSLFRFRSDTDSETHDLLHCTSCEAVMNS----GGGRASGRA 903
Query: 731 NKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVP-DAILQ 789
+Q K + + P ++L W H + P D +++
Sbjct: 904 RLKEQE---------------APMKFRPVTVKKSGPRMDELKGWRHFSQCATFPLDKVIR 948
Query: 790 A---SAGDEVTFVFTNQVD 805
A +A +F+F ++ D
Sbjct: 949 AIATAAPGICSFIFADERD 967
>gi|342185668|emb|CCC95153.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1029
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 277/705 (39%), Positives = 383/705 (54%), Gaps = 89/705 (12%)
Query: 135 PRTVENNVIEENFTLPPGVDP-----LVLWQPEEPQNDGGNL-VPITVDPLLVRFLRPHQ 188
P+ +N ++ E L P DP ++L+ ++ G L V + VDP++ LRPHQ
Sbjct: 312 PKIGKNGIMAE---LKPLHDPDREGAVILFHAHYKRDVNGRLQVSVVVDPVIGDKLRPHQ 368
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAII 248
R GV+F+F+C++G G HG ILAD+MGLGKT+Q++A +YT L QG G P +K +I
Sbjct: 369 RVGVKFLFDCITGE-RMPGYHGAILADEMGLGKTIQTVATVYTCLRQGKYGNPTARKCLI 427
Query: 249 VTPTSLVSNWEAEIKKWVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYE 305
VTP+SLV NW E KW+G G V+ A+ EST D ++S D D VL++SY+
Sbjct: 428 VTPSSLVKNWCNEFDKWLGVGAVKYFAISESTPKGDRIISRFDGEGD------VLVISYD 481
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
R + ++ S +S +L++CDE HRLKN + T + NDL EF
Sbjct: 482 QLRKYITRISTLKSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEF 541
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
AMV F NPGILG F R +E + GR+P E + LG +R+ LS +FILRR
Sbjct: 542 HAMVGFVNPGILGSRDVFARVFEEPVTLGRDPDCPEYLRMLGADRAHYLSNLTQKFILRR 601
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T ++ ++LPPK+ V +L Q Y K V + E Q L I+AL+K
Sbjct: 602 TQSINESYLPPKVDLTVFVRLGVKQETAY------KKVAELV--ENSQCTPLVLISALRK 653
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
LCNH L ++ + + N P G E+ KM ++
Sbjct: 654 LCNHMDLFHEAVLNSNKNNDNGSLPTSLIPKGYKVGTLSE---------EVGSKMRFVSL 704
Query: 527 LLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP 585
+L L++ D D++V+VSN+TQTLD+ A LC+ ++ + +LDG+ I KRQ++V+ FN P
Sbjct: 705 MLDELQKNGDHDKLVIVSNFTQTLDVIASLCKMKKISFFQLDGSMPIKKRQEVVDRFNTP 764
Query: 586 SKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFL 645
E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRVFIYR L
Sbjct: 765 VSKEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLL 824
Query: 646 STGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHEN 705
STG+IEEK+YQRQ+SK+GL + Q+DS + ++LR LF + D SE H+
Sbjct: 825 STGSIEEKIYQRQVSKQGLSANVVDMQSDSK----QHFTLDELRSLFRYRSDTNSETHDL 880
Query: 706 MHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGT 765
+HCT C E++ + + S K Q + +G EK+ G
Sbjct: 881 LHCTNC-------EAVADAEGGKSRQKELQGPMKFRRVG---------------EKKSG- 917
Query: 766 PLEEDLNNWGHHFYSMSVP-----DAILQASAGDEVTFVFTNQVD 805
P + L W H P AI AS G T +F ++ D
Sbjct: 918 PRMDQLKGWRHFTRCEKFPLDKVVRAIATASPGI-CTCIFADERD 961
>gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 840
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/624 (42%), Positives = 361/624 (57%), Gaps = 64/624 (10%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +G++ +GCI+AD+MGLGKTLQ IAL++T
Sbjct: 217 VPVVIDPRLSKVLRPHQVEGVKFLYRCTTGMVEE-NQYGCIMADEMGLGKTLQCIALMWT 275
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q G+P ++K II P+SLV NW E+ KW+G G+ L E
Sbjct: 276 LLKQSPHPGRPTIEKCIIACPSSLVKNWANELTKWLGKDTVTPLAIDGKGGKAELLEKVA 335
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT-- 338
V + + T P V+IVSYET R + + + LL+CDE HRLKN ++LT
Sbjct: 336 RWVAARGRNVTQP-----VMIVSYETLRTLTVYLAGCK-IGLLLCDEGHRLKNSESLTFQ 389
Query: 339 -------NR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NR NDL E+F+++NF NP LG FR+ +E +II GR+ A+
Sbjct: 390 ALNSLDVNRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDSDAS 449
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ K + EL V +FI+RRTN LLS +LP K +VV C L+ Q LY FI S
Sbjct: 450 DAVKAASEAKLKELGGLVMKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLALYRLFITS 509
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLI---YDTIKSGNPGTTGFEDCIRFFPPE 498
+K + +S+ L I LKKLCNHP+L+ D S + GF +
Sbjct: 510 PEIKALL--RGTESQPLKAINILKKLCNHPELLDLPKDLKGSDHLIPEGFVGAGQQQQGR 567
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLA----------RLLGHLRQRTDDRIVLVSNYTQT 548
G G ++ L +H + R L + +T+D+IVL+SNYTQT
Sbjct: 568 GAGRNVGVRCDWSGKFLVLERLVHSVRAGPSVTEPSNRFLHQIHTQTNDKIVLISNYTQT 627
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
LDLF +L R ++Y Y RLDGT SI+KRQKLV+ FNDP+ EF+FLLSSKAGGCG+NLIG
Sbjct: 628 LDLFEKLLRSKKYGYFRLDGTMSITKRQKLVDQFNDPNGKEFIFLLSSKAGGCGINLIGA 687
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
NRL+LFDPDWNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ SK+ L +
Sbjct: 688 NRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAV 747
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES--IGEGDE 726
E+ D T+ +F S + LR LFTF++ + HE C RC++ +S + GD
Sbjct: 748 VDEKED---TERHF-SLDSLRQLFTFNEKTLCDTHETFKCKRCKDGKQMVKSPALLYGDA 803
Query: 727 ------TNSANKNDQSDQEVTDIG 744
TN KN+ D ++G
Sbjct: 804 STWNHFTNPELKNNHDDLLRAEVG 827
>gi|403295789|ref|XP_003938808.1| PREDICTED: DNA repair and recombination protein RAD54B [Saimiri
boliviensis boliviensis]
Length = 910
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/582 (43%), Positives = 355/582 (60%), Gaps = 71/582 (12%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+G LV + +DP +V LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I
Sbjct: 280 NGLPLVDVVIDPYVVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCI 338
Query: 227 ALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIAL-CESTRDDV 283
+L++TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + E +D
Sbjct: 339 SLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQEHKVEDF 398
Query: 284 VSGIDSFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLT 338
+ + VL++SYE ++ KF D+LICDE HRLKN T
Sbjct: 399 IKSV--------FYSVLVISYEMLLRSLDQIKDIKF------DILICDEGHRLKNSAIKT 444
Query: 339 N-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
+NDL+EFFA+++F NPGILG + +R+ YE II REP+
Sbjct: 445 TTALISLSCDKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPS 504
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
A+EEEK+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY +
Sbjct: 505 ASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPVALQIELYRKLL 564
Query: 440 HSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDC 491
+S+ V+ + + S L I ALKKLCNHP L++++IK +T ++
Sbjct: 565 NSQVVRFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGL 624
Query: 492 IRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYT 546
+ FP P +F+ + SGK+ VL++LL + + R +R+VLVSNYT
Sbjct: 625 LSVFPADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTERVVLVSNYT 671
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
QTL++ ++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLI
Sbjct: 672 QTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLI 731
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
GG+ L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL
Sbjct: 732 GGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLCG 791
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+ S Q S E+L++LFT H+ H+ + C
Sbjct: 792 AVVDLTKTSEHIQ---FSLEELKNLFTLHESSPCVTHDLLDC 830
>gi|350583049|ref|XP_003355071.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Sus
scrofa]
Length = 895
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/578 (44%), Positives = 355/578 (61%), Gaps = 71/578 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV LRPHQREG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 269 IVDVVIDPHLVYHLRPHQREGIIFLYECVMGM-RVNGRCGAILADEMGLGKTLQCISLIW 327
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ + D ++
Sbjct: 328 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTV------DPDHKVE 381
Query: 289 SFT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
FT P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 382 EFTKSPLYS--VLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTAL 433
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL+EFF++++F NPGILG + +R+ YE II R+P+A++E
Sbjct: 434 FSLPCEKRIILTGTPVQNDLQEFFSLIDFVNPGILGSLSCYRKIYEEPIITSRQPSASQE 493
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EK+LG R+ EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+
Sbjct: 494 EKELGERRACELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQA 553
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFF 495
V+ + + S L I ALKKLCNHP L++ ++K + +ED ++ F
Sbjct: 554 VRFCLQGLMENSSHLICIGALKKLCNHPCLLFSSVKEKECSSAWDENEERRLYEDLLKVF 613
Query: 496 PPE----MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLD 550
PP+ MF+ E SGK+ VL++LL + + R +++VLVSNYTQTL+
Sbjct: 614 PPDYNPLMFAE-------------EESGKLQVLSKLLAVIHELRPAEKVVLVSNYTQTLN 660
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ ++CR Y RLDG T IS+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+
Sbjct: 661 ILQEVCRRHGYGCTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSH 720
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+ L +
Sbjct: 721 LILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVD 780
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H++ H+ + C
Sbjct: 781 LTKTSDHIQ---FSVEELKNLFTLHENSHCVTHDLLDC 815
>gi|395512148|ref|XP_003760306.1| PREDICTED: DNA repair and recombination protein RAD54B [Sarcophilus
harrisii]
Length = 912
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/580 (43%), Positives = 354/580 (61%), Gaps = 45/580 (7%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 285 LVDVVVDPYLVHHLRPHQKEGIVFLYECVMGM-RMNGRFGAILADEMGLGKTLQCISLVW 343
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TLL QG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + + + + D
Sbjct: 344 TLLRQGLYGGKPIIKKTLIVTPGSLVTNWKKEFQKWLGSERIKVFTVDQDHKIE-----D 398
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
P S VL++SYE ++ + KF DLLICDE HRLKN T
Sbjct: 399 FVNSPLYS--VLVISYEMLLRCLDQIKNIKF------DLLICDEGHRLKNSSIKTTTALV 450
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EF+A++ F NPGILG + +R+ YE II REP+ATEEE
Sbjct: 451 GLSCEKRVILTGTPIQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIASREPSATEEE 510
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
KKLG +R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY + S+ V
Sbjct: 511 KKLGEKRAAELTRLTGLFILRRTQEVINKYLPPKIENVVFCRPGRLQIELYRKLLDSQAV 570
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ + + S L I ALKKLCNHP L++ ++K ++ E F +
Sbjct: 571 RFCLQGVLENSPHLICIGALKKLCNHPCLLFKSLKEKECNSSSDEYEEYNFSESLIDAYP 630
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPY 563
+ + + SGK+HVL +LL + + + +++VLVSNYTQTL++ ++C+ Y
Sbjct: 631 ADYNPLTFSETD-SGKLHVLTKLLAVIHELSPSEKVVLVSNYTQTLNILQEVCKRHGYNC 689
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
RLDG T + +RQ++V+ FN ++FVFLLSSKAGG GLNLIGG+ L+L+D DWNPA D
Sbjct: 690 SRLDGQTPVVQRQQIVDGFNSKHSSDFVFLLSSKAGGVGLNLIGGSHLILYDIDWNPATD 749
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA ARVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL + S Q
Sbjct: 750 IQAMARVWRDGQKHSVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSKTSEHIQ---F 806
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE 723
S E+L++LFT H+D H+ + C D A+ + E
Sbjct: 807 SVEELKNLFTLHEDSDCVTHDLLDCECMGRKDHQAKPLEE 846
>gi|296226943|ref|XP_002759149.1| PREDICTED: DNA repair and recombination protein RAD54B [Callithrix
jacchus]
Length = 910
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/577 (43%), Positives = 352/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 284 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 342
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 343 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 396
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VL++SYE ++ KF D+LICDE HRLKN T
Sbjct: 397 EFIKSVF-YSVLVISYEMLLRSLDQIKDIKF------DILICDEGHRLKNSAIKTTTALI 449
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 450 SLSCDKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 509
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 510 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPVALQIELYRKLLNSQVV 569
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 570 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 629
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +R+VLVSNYTQTL++
Sbjct: 630 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTERVVLVSNYTQTLNI 676
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 677 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHL 736
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 737 ILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 796
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 797 TKTSEHIQ---FSLEELKNLFTLHESSSCVTHDLLDC 830
>gi|332238364|ref|XP_003268366.1| PREDICTED: DNA repair and recombination protein RAD54B [Nomascus
leucogenys]
Length = 911
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 353/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHL 735
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 795
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 829
>gi|158261897|dbj|BAF83126.1| unnamed protein product [Homo sapiens]
Length = 910
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 353/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 735
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 795
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 829
>gi|114620949|ref|XP_001142757.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Pan troglodytes]
gi|410225608|gb|JAA10023.1| RAD54 homolog B [Pan troglodytes]
gi|410256892|gb|JAA16413.1| RAD54 homolog B [Pan troglodytes]
gi|410338389|gb|JAA38141.1| RAD54 homolog B [Pan troglodytes]
Length = 910
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 353/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGSCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 735
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 795
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 829
>gi|301788109|ref|XP_002929471.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Ailuropoda melanoleuca]
Length = 911
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 259/588 (44%), Positives = 355/588 (60%), Gaps = 72/588 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 284 IVDVVIDPHLVYHLRPHQKEGIIFLYECVMGM-RVNGRCGAILADEMGLGKTLQCISLIW 342
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ + D ++
Sbjct: 343 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPV------DQDHKVE 396
Query: 289 SFT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
FT P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 397 EFTKSPFYS--VLIISYEMLLRSLDQVKNVKF------DLLICDEGHRLKNSAIKTTTAL 448
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL+EFFA+++F NPGIL + +R+ YE II R+P+A+EE
Sbjct: 449 ISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIISRQPSASEE 508
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EK+LG +R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+
Sbjct: 509 EKELGEKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQA 568
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS--------GNPGTTGFEDCIRFF 495
V+ + S L I ALKKLCNHP L++++IK GN + +E + F
Sbjct: 569 VRFCLQGLLGNSPHLICIGALKKLCNHPCLLFNSIKEKEYSSTWDGNEERSLYEGLVDVF 628
Query: 496 P----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLD 550
P P MF E SGK+ VL +LL + + R +++VLVSNYTQTL+
Sbjct: 629 PADYNPLMFME-------------EESGKLQVLMKLLAVIHELRPTEKVVLVSNYTQTLN 675
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ ++C+ Y Y RLDG T IS+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+
Sbjct: 676 ILQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSH 735
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+ L +
Sbjct: 736 LILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVD 795
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGA 718
S Q S E+L++LF H+ H+ + C C DG
Sbjct: 796 LTKTSEHIQ---FSVEELKNLFILHESSHCVTHDLLDC-ECTGDKDGT 839
>gi|395818192|ref|XP_003782520.1| PREDICTED: DNA repair and recombination protein RAD54B [Otolemur
garnettii]
Length = 910
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/584 (44%), Positives = 355/584 (60%), Gaps = 56/584 (9%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EGV F++ECV G+ G +G ILAD+MGLGKTLQ I+L++
Sbjct: 284 LVDVVIDPYLVCHLRPHQKEGVVFLYECVMGM-RMNGRYGAILADEMGLGKTLQCISLIW 342
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ + + + + +
Sbjct: 343 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFIKVT 402
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
++ VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 403 FYS-------VLIISYEMLLRSLDQVKNIKF------DLLICDEGHRLKNSAIKTTTALI 449
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +RR YE II REP+A+EE+
Sbjct: 450 SLSCEKRIILSGTPVQNDLQEFFALIDFVNPGILGSLSSYRRIYEEPIILSREPSASEED 509
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K LG R++EL+ FILRRT +++ +LPPKI VV C T LQ E+Y ++S+ V
Sbjct: 510 KNLGERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCWPTALQIEIYRKLLNSQAV 569
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ + + + S L I ALKKLCNHP L++ +IK +T E+ R + +
Sbjct: 570 RFCL-QGLENSPHLICIGALKKLCNHPCLLFSSIKEKECSSTCDENEERRLYEGLLNVFP 628
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
+ +E SGK+ VL +LL + R +++VLVSNYTQTL++ ++C+ Y Y
Sbjct: 629 ADYNPLQFTEME-SGKLQVLLKLLAVIHDLRPTEKVVLVSNYTQTLNILQEVCKRHGYTY 687
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
RLDG T I +RQ +V+ FN ++F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D
Sbjct: 688 TRLDGQTPIVQRQHIVDGFNSKHSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATD 747
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL + S Q
Sbjct: 748 IQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVIDLTKTSEHIQ---F 804
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDET 727
S E+L++LFT H+ R H+ + C E GE D T
Sbjct: 805 SVEELKNLFTLHESSRCVTHDLLDC----------ECTGEKDHT 838
>gi|6912622|ref|NP_036547.1| DNA repair and recombination protein RAD54B isoform 1 [Homo
sapiens]
gi|51316548|sp|Q9Y620.1|RA54B_HUMAN RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|4959396|gb|AAD34331.1|AF112481_1 RAD54B protein [Homo sapiens]
gi|12805023|gb|AAH01965.1| RAD54 homolog B (S. cerevisiae) [Homo sapiens]
gi|119612119|gb|EAW91713.1| hCG2009220, isoform CRA_c [Homo sapiens]
gi|261859006|dbj|BAI46025.1| RAD54 homolog B [synthetic construct]
Length = 910
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 353/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 735
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 795
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 829
>gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
Length = 838
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/566 (44%), Positives = 350/566 (61%), Gaps = 42/566 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ GV+F++ C SGL++ GCI+AD+MGLGKTLQ +AL++T
Sbjct: 236 VPVVIDPRLAKILRPHQIAGVKFLYRCTSGLIDPRA-KGCIMADEMGLGKTLQCLALMWT 294
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRD-DVVSGID 288
LL Q GK ++K IIV P+SLV NW EI KW+G G + +A+ +ST+ D+ +
Sbjct: 295 LLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKSSDLGQALQ 354
Query: 289 SFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
++ VLI+SYET R + K + +E L++ DE HRLKN +LT
Sbjct: 355 QWSVATGRNIVRPVLIISYETLRRNVDKLAGTE-VGLMLADEGHRLKNGDSLTFTALNSL 413
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL E+F+++NF NPG LG FR+ +E++I+ GR+ AT++EK+
Sbjct: 414 RCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFESAILRGRDADATDKEKE 473
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ ++ +ELS V++FI+RRTN +LS +LP K VV L+P+Q +LY +F+ S +K+
Sbjct: 474 VSDKKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVVFVGLSPMQKKLYEYFVTSPEIKK 533
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ Q L I LKKLCNH + + G + I PE + G+
Sbjct: 534 LLKGVGSQP--LKAIGMLKKLCNH-----PDLLNLPDDLDGCDSLI----PEDYVPAIGN 582
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK +L R L +R T+D+IVL+SNYTQTLDL ++CR ++Y +RL
Sbjct: 583 GNRSREIQTWFSGKFMLLERFLHKIRTETNDKIVLISNYTQTLDLIEKMCRYKKYANVRL 642
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT +I+KRQKLV+ FNDP +EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA+D+QA
Sbjct: 643 DGTMNINKRQKLVDRFNDPEGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQQA 702
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARVWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S +
Sbjct: 703 LARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVE----RLFSAD 758
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQ 712
+L+ LF F + + H+ C RC+
Sbjct: 759 NLKQLFEFQPNTPCDTHDTYSCKRCR 784
>gi|426360251|ref|XP_004047361.1| PREDICTED: DNA repair and recombination protein RAD54B [Gorilla
gorilla gorilla]
Length = 915
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 353/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 288 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 346
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 347 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 400
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 401 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 453
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 454 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 513
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 514 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 573
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 574 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 633
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 634 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 680
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 681 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 740
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 741 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 800
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 801 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 834
>gi|402878733|ref|XP_003903027.1| PREDICTED: DNA repair and recombination protein RAD54B [Papio
anubis]
Length = 908
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/576 (43%), Positives = 353/576 (61%), Gaps = 68/576 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTAALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI V+ C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-------TGFEDCIRFFP- 496
+ + + S L I ALKKLCNHP L++++IK T + ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPA 628
Query: 497 ---PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLF 552
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 DYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL 675
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L+
Sbjct: 676 QEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHLI 735
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 LYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLT 795
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 KTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 828
>gi|327532753|ref|NP_001192192.1| DNA repair and recombination protein RAD54B isoform 3 [Homo
sapiens]
gi|119612118|gb|EAW91712.1| hCG2009220, isoform CRA_b [Homo sapiens]
Length = 726
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 353/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 99 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 157
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 158 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 211
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 212 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 264
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 265 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 324
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 325 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 384
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 385 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 444
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 445 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 491
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L
Sbjct: 492 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 551
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 552 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 611
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 612 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 645
>gi|281209483|gb|EFA83651.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 934
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 269/678 (39%), Positives = 377/678 (55%), Gaps = 85/678 (12%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P + VL+ P++ N +P+ +DP+L LRPHQR G+QFMF+C+ GL +
Sbjct: 269 PYAPNAFVLYMPKDQLNGE---IPVVMDPMLGNKLRPHQRVGIQFMFDCLLGLGGFKDGN 325
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
GCILADDMGLGKT+Q+I++++TLL QG G+P ++AIIV PT LV NW E+KKW+G
Sbjct: 326 GCILADDMGLGKTIQAISIMWTLLKQGIRGEPTCQRAIIVAPTGLVGNWVKELKKWLGEG 385
Query: 270 VQLIALCESTRDDVVSGIDSFTD-PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEA 328
++ I + +ST +G VL++SY+ ++ + + L+ICDE
Sbjct: 386 IKSIHIGKSTP----TGRAKLAQLETGDADVLVISYDQLKIWINDLIKIDMIGLVICDEG 441
Query: 329 HRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
HRLKN +T + + N+L EF+AMVNF NPG+L F Y
Sbjct: 442 HRLKNAETKSTQAVNMLPTKRRVILSGTPIQNNLMEFYAMVNFVNPGVLKSVPMFNNVYN 501
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
I+ R P AT EEK++G ERS L+ +FILRRT A+ + +LP K V CKL+P
Sbjct: 502 GPILASRSPDATPEEKRVGRERSLMLTEITGKFILRRTAAINTQYLPKKTEYTVFCKLSP 561
Query: 430 LQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD-----TIKSGNPG 484
LQ +Y + + + +T + L IT+LKKL N P+L+Y
Sbjct: 562 LQKTIYLKLLE---IIKGRGYQT-FTGALPLITSLKKLSNCPELVYTPPSAKEDDKEEEK 617
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
I P+ F+ + + + SGK+ + L+ +R +T DR+V++SN
Sbjct: 618 AEDVSSVIHGLFPKEFNTKV--------SQPQYSGKLQFIDTLMQQIRNKTKDRVVVISN 669
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
YTQTL + A+LC ER YP+ +LDG+T KRQ LV+ FNDPS +FVFLLSSKAGG GLN
Sbjct: 670 YTQTLSVLARLCNERGYPFFQLDGSTPSDKRQVLVDKFNDPSSPQFVFLLSSKAGGIGLN 729
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG N L+L DPDWNPAND QA ARVWR+GQKK V IYR LSTGTIEEK+YQRQ++K L
Sbjct: 730 LIGANHLILVDPDWNPANDAQAMARVWREGQKKVVSIYRTLSTGTIEEKIYQRQITKMAL 789
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEG 724
+ + +D++ + T+DL+D+F DD + H+ M C D GA
Sbjct: 790 SVSVVEGDSDNAPS----FDTKDLKDIFNLRDDTLCDTHD-MLGRIC---DCGAP----- 836
Query: 725 DETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVP 784
+ NK+ +KS+E+Q G + E L + H+ +P
Sbjct: 837 ----ARNKD----------------------VKSAERQ-GMAISE-LATYKHYHDMSKIP 868
Query: 785 DAILQASAGDEVTFVFTN 802
D IL +A + TF+F N
Sbjct: 869 DPILSFAAKNNCTFIFAN 886
>gi|334326071|ref|XP_001379449.2| PREDICTED: DNA repair and recombination protein RAD54B [Monodelphis
domestica]
Length = 827
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/582 (43%), Positives = 355/582 (60%), Gaps = 49/582 (8%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 200 LVDVVVDPYLVHHLRPHQKEGIVFLYECVMGM-RMNGRFGAILADEMGLGKTLQCISLIW 258
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TLL QG + GKP++KK +IVTP SLV+NW E +KW+G R+++ L ++ + + D
Sbjct: 259 TLLRQGLYGGKPIIKKTLIVTPGSLVTNWRKEFQKWLGTERIKVFTLDQAHKIE-----D 313
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 314 FIISPLYS--VLIISYEMLLRCLDQIKNIKF------DLLICDEGHRLKNSSIKTTTALV 365
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EF+A++ F NPGILG + +R+ YE II REP+AT+EE
Sbjct: 366 SLSCEKRVILTGTPVQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIISREPSATQEE 425
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
KKLG +R++EL+ FILRRT +++ +LPPKI V+ C+ LQ ELY + S+ V
Sbjct: 426 KKLGEKRAAELTRLTGLFILRRTQEVINKYLPPKIESVIFCRPGILQIELYRKLLSSQAV 485
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS--GNPGTTGFEDCIRFFPPEMFSG 502
+ + + + L I ALKKLCNHP L++ ++K N + +E+ F +
Sbjct: 486 RFCLQGILENAPHLLCIGALKKLCNHPCLLFKSLKEKENNSSSEQYEE--YNFSEGLIDA 543
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRY 561
+ + + SGK+ VL +LL +R+ + +++VLVSNYTQTL++ +C Y
Sbjct: 544 YPADYNPNTFSETD-SGKLQVLTKLLAAIRELSPSEKVVLVSNYTQTLNILQAVCTRHGY 602
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
RLDG T + +RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA
Sbjct: 603 TCTRLDGQTPVVQRQQIVDGFNCKHSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPA 662
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D QA ARVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL + S Q
Sbjct: 663 TDIQAMARVWRDGQKHSVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLAKTSEHIQ-- 720
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE 723
S E+L++LFT H+D H+ + C + + AES+ E
Sbjct: 721 -FSVEELKNLFTLHEDSDCVTHDLLDCECVEKKEHQAESLEE 761
>gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Macaca mulatta]
Length = 908
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/576 (43%), Positives = 353/576 (61%), Gaps = 68/576 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTAALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI V+ C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-------TGFEDCIRFFP- 496
+ + + S L I ALKKLCNHP L++++IK T + ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPA 628
Query: 497 ---PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLF 552
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 DYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL 675
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L+
Sbjct: 676 QEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHLI 735
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 LYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLT 795
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 KTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 828
>gi|390597886|gb|EIN07285.1| SNF2 family domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 846
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 267/604 (44%), Positives = 352/604 (58%), Gaps = 82/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
V + +DP L + LRPHQ EGV+F+F C SG++ +GCI+AD+MGLGKTLQ IALL+T
Sbjct: 211 VAVVIDPRLTKVLRPHQVEGVKFLFRCTSGMV-VENQYGCIMADEMGLGKTLQCIALLWT 269
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GR------VQLIA 274
L+ Q GKP ++K II P+SLV NW E+ KW+G G+ ++ +A
Sbjct: 270 LVKQSPHAGKPTIEKCIIACPSSLVKNWANELVKWLGKDAISALAVDGKGSKGELLERVA 329
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
+ V+ D T + +V+IVSYET R + + + LL+CDE HRLKN
Sbjct: 330 RWTAASGRNVTQPDRVTKSPNMSKVMIVSYETLRTLTVYLNGCK-IGLLLCDEGHRLKNA 388
Query: 335 QTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
++ T + NDL E+F++++F NP LG FR+ +E II G
Sbjct: 389 ESQTYQALTGLDVKRRVILTGTPIQNDLTEYFSLLDFANPNYLGTRNEFRKNFENIIIRG 448
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
R+ AT++ K+ ++ ELS V +FI+RRTN LLS +LP K +VV CK +PLQ LY
Sbjct: 449 RDADATDKAKEDCEKKLKELSGLVTKFIIRRTNDLLSKYLPVKYEQVVFCKPSPLQLSLY 508
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI---YDTIKSGNPGTTGFEDCI 492
FI S +K + K+S+ L I LKKLCNHP+L+ D SG+
Sbjct: 509 RLFIASPEIKALL--RGKESQPLKAINVLKKLCNHPELLDLPKDLHGSGS---------- 556
Query: 493 RFFPPEMFSGRSGSWTG-------------GDGAWVELSGKMHVLARLL-----GHLRQR 534
P+ F G S T E SGK VL R L G+ +
Sbjct: 557 --LIPDDFCGMGESATRSGGSSSRSRGGGGAQIVHPEWSGKFVVLDRFLAQINAGNADKE 614
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRER-----RYPYLRLDGTTSISKRQKLVNHFNDPSKNE 589
D+IVL+SNYTQTLDLF +L R R RY Y RLDGT +I KRQKLV+ FN+P+ E
Sbjct: 615 NKDKIVLISNYTQTLDLFERLLRARNGYSNRYHYYRLDGTMTIPKRQKLVDDFNNPTSKE 674
Query: 590 FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGT 649
F+FLLSSKAGGCG+NLIG NRL+LFDPDWNPA D+QA ARVWRDGQKK F+YRF+STGT
Sbjct: 675 FIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKACFVYRFISTGT 734
Query: 650 IEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
IEEK++QRQ SK+ L + E+ D+ S LR+LF F+++ SE HE C
Sbjct: 735 IEEKIFQRQASKQALSSAVVDEKEDAE----RHFSLSQLRELFLFNENTLSETHETFKCK 790
Query: 710 RCQN 713
RC+N
Sbjct: 791 RCKN 794
>gi|355698101|gb|EHH28649.1| DNA repair and recombination protein RAD54B [Macaca mulatta]
Length = 908
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/576 (43%), Positives = 353/576 (61%), Gaps = 68/576 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTAALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI V+ C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-------TGFEDCIRFFP- 496
+ + + S L I ALKKLCNHP L++++IK T + ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPA 628
Query: 497 ---PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLF 552
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 DYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL 675
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L+
Sbjct: 676 QEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHLI 735
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 LYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLT 795
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 NTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 828
>gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
Length = 731
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/582 (43%), Positives = 355/582 (60%), Gaps = 48/582 (8%)
Query: 150 PPGVDPLVLWQPEEPQND--GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG 207
P D LVL+ P + Q D G +V + VDP + + LRPHQR GV+F+++CV+G N G
Sbjct: 11 PNSKDALVLYTPPDSQLDDKGNKVVHVIVDPHISQHLRPHQRRGVKFLYDCVTGTNNEEG 70
Query: 208 IHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
G ILAD MGLGKTLQ++AL++TLL Q GK +KKAIIVTP++LV+NW+ EI+KW G
Sbjct: 71 YTGAILADQMGLGKTLQTLALVWTLLKQSPTGKSTIKKAIIVTPSTLVNNWKKEIQKWFG 130
Query: 268 -GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
R+ L +S + + +D+F S VLI+SYE R+ SK + SC LL+CD
Sbjct: 131 LDRLIATTLTDSLSKETKTNLDNFN--TSIKPVLIISYEQCRIF-SKILETMSCGLLVCD 187
Query: 327 EAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
EAHRLKN + T +NDL EF++MV+F NPG LG A F++
Sbjct: 188 EAHRLKNSNSKTTQAINSVKAERKILLTGTPIQNDLVEFYSMVDFCNPGSLGSLASFKKN 247
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+ I RE T ++ + G ++S ELS FILRR + +L +LPPK ++VV C+L
Sbjct: 248 FINPINKSRESTGNPKDIENGTKKSIELSKLTKSFILRRKSNILEKYLPPKRVQVVFCRL 307
Query: 428 TPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
+PLQ +LY ++S +V+ I+ + + L+ IT LKKLCN P L+ DT
Sbjct: 308 SPLQQDLYKSVLNSNSVQSLINGKESPASSLSTITLLKKLCNSPSLLQDT------SDQE 361
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
+ + + M S + +GK+ + L+ L+ +++VLVSNYTQ
Sbjct: 362 LQSIFKQYSYNMESMENE------------AGKLLFVESLIKQLKS-VGEKLVLVSNYTQ 408
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF-VFLLSSKAGGCGLNLI 606
TLD+F +LC++ +LRLDG+ S RQ LV+ FND S ++ +FLLS+KAGG G+NLI
Sbjct: 409 TLDVFERLCKKLSTDFLRLDGSVSSDTRQSLVDKFNDQSNKKYQIFLLSAKAGGVGINLI 468
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
GGN LVL+DPDWNPA D QA RVWR+GQ K VFIYR STGTIEEK+YQRQ+ KE +
Sbjct: 469 GGNHLVLYDPDWNPAIDIQAMERVWREGQNKPVFIYRLFSTGTIEEKIYQRQLMKESISN 528
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
I ++ + + G S EDL+D+F+++ + S+ H+ + C
Sbjct: 529 SIVDKKFNDN---GGGFSLEDLKDIFSYNQNTYSDTHDLLQC 567
>gi|281347253|gb|EFB22837.1| hypothetical protein PANDA_019651 [Ailuropoda melanoleuca]
Length = 810
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 259/588 (44%), Positives = 355/588 (60%), Gaps = 72/588 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 183 IVDVVIDPHLVYHLRPHQKEGIIFLYECVMGM-RVNGRCGAILADEMGLGKTLQCISLIW 241
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ + D ++
Sbjct: 242 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPV------DQDHKVE 295
Query: 289 SFT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
FT P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 296 EFTKSPFYS--VLIISYEMLLRSLDQVKNVKF------DLLICDEGHRLKNSAIKTTTAL 347
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL+EFFA+++F NPGIL + +R+ YE II R+P+A+EE
Sbjct: 348 ISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIISRQPSASEE 407
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EK+LG +R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+
Sbjct: 408 EKELGEKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQA 467
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS--------GNPGTTGFEDCIRFF 495
V+ + S L I ALKKLCNHP L++++IK GN + +E + F
Sbjct: 468 VRFCLQGLLGNSPHLICIGALKKLCNHPCLLFNSIKEKEYSSTWDGNEERSLYEGLVDVF 527
Query: 496 P----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLD 550
P P MF E SGK+ VL +LL + + R +++VLVSNYTQTL+
Sbjct: 528 PADYNPLMFME-------------EESGKLQVLMKLLAVIHELRPTEKVVLVSNYTQTLN 574
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ ++C+ Y Y RLDG T IS+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+
Sbjct: 575 ILQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSH 634
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+ L +
Sbjct: 635 LILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVD 694
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGA 718
S Q S E+L++LF H+ H+ + C C DG
Sbjct: 695 LTKTSEHIQ---FSVEELKNLFILHESSHCVTHDLLDC-ECTGDKDGT 738
>gi|432106413|gb|ELK32206.1| DNA repair and recombination protein RAD54B [Myotis davidii]
Length = 817
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/577 (43%), Positives = 351/577 (60%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP L +LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+LL+
Sbjct: 189 VVDVVIDPHLAYYLRPHQKEGLIFLYECVMGM-RVNGRCGAILADEMGLGKTLQCISLLW 247
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW E +KW+G R+++ + + + + +
Sbjct: 248 TLQCQGPYGGKPIIKKTLIVTPGSLVNNWRREFQKWLGSERIKIFTVDQDHKVE-----E 302
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
P S VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 303 FIKSPLYS--VLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 354
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + FR+ YE II R+P+A++E+
Sbjct: 355 SLACEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSFRKIYEEPIIVSRQPSASKED 414
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL F LRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 415 KELGERRAAELVCFTGLFFLRRTQEVINKYLPPKIENVVFCRPGALQLELYQKLLNSQAV 474
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T +E + FP
Sbjct: 475 RFCLQGSLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTWDEHEESSLYEGLLNVFP 534
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P MF+ + SGK+ VL +LL + + R DR+VLVSNYTQTL++
Sbjct: 535 ADYNPLMFTEKE-------------SGKLQVLTKLLAVIHELRPTDRVVLVSNYTQTLNI 581
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y RLDG T +S+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+ L
Sbjct: 582 LQEVCKRHGYACTRLDGQTPVSQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHL 641
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 642 ILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDL 701
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 702 AKTSEHIQ---FSVEELKNLFTLHESSHCVTHDLLDC 735
>gi|300795783|ref|NP_001178684.1| fibrinogen silencer-binding protein [Rattus norvegicus]
Length = 888
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 274/691 (39%), Positives = 386/691 (55%), Gaps = 92/691 (13%)
Query: 74 PRVLSVTEGAAVCRKPFKPPCSNGY---DNGNDQLARRLCARKRFVPWGSSRPVLVTIT- 129
P V S PFK C + D GND W + +P T
Sbjct: 195 PAVPSSQAARKCFSNPFKSVCQSTQARRDRGND--------------WQNCKPRYDPYTP 240
Query: 130 NRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQR 189
N L +PR +++ N + P VD + +DP LVR LRPHQ+
Sbjct: 241 NALVMPRPDKSHQWAFNRSCLPTVD-------------------VVIDPHLVRHLRPHQK 281
Query: 190 EGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAII 248
+GV F++ECV G+ A G G ILAD+MGLGKTLQ I+L++TL CQG + GKP+VK+ +I
Sbjct: 282 DGVAFLYECVMGM-RAVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIVKRTLI 340
Query: 249 VTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF 307
VTP SLV+NW E +KW+G R+++ + D ++ F + VLI+SYE
Sbjct: 341 VTPGSLVNNWRKEFQKWLGSERIKIFTV------DQDHKVEEFINSAFH-SVLIISYEML 393
Query: 308 -----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDL 343
R+ + F LLICDE HRLKN T +NDL
Sbjct: 394 LRSLDRIKTITFG------LLICDEGHRLKNSGIKTTAALSSLSCEKRVILTGTPVQNDL 447
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
+EFFA+V+F NPGILG + +RR YE I+ REP+A++EE++LG R++EL+ FI
Sbjct: 448 QEFFALVDFVNPGILGSLSSYRRIYEEPIVMSREPSASKEERELGERRTTELTRLTGCFI 507
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRT +++ +LPPKI VV C+ LQ ELY + S++V+ + S L I A
Sbjct: 508 LRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLSSQSVRFCLQGLLGNSAHLICIGA 567
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
LKKLCNHP+L++ +K ++ E+ R + + + + E SGK+ V
Sbjct: 568 LKKLCNHPRLLFSFVKGKEFNSSRDENEERSLCQGLLTVFPAGYNLLQLSESE-SGKLQV 626
Query: 524 LARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
L +LL + + R ++++LVSNY QTL+L ++C+ Y RLDG T +S+RQ++V++F
Sbjct: 627 LVKLLAAISELRPTEKVILVSNYRQTLNLLEEVCKCHGYACARLDGQTPVSQRQQIVDNF 686
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N +F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA ARVWRDGQK V +Y
Sbjct: 687 NSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMARVWRDGQKHPVHVY 746
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEI 702
R L+TGTIEEK+YQRQ+SK+GL + S Q S E+L++LFT H++
Sbjct: 747 RLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEQIQ---FSVEELKNLFTLHENSHCVT 803
Query: 703 HENMHCTRCQNYDDGAESIGEGDETNSANKN 733
H+ + C E GE D ++ A++N
Sbjct: 804 HDLLDC----------ECTGEKDHSDDASEN 824
>gi|355779828|gb|EHH64304.1| DNA repair and recombination protein RAD54B [Macaca fascicularis]
Length = 908
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/576 (43%), Positives = 353/576 (61%), Gaps = 68/576 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTAALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGCLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI V+ C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-------TGFEDCIRFFP- 496
+ + + S L I ALKKLCNHP L++++IK T + ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPA 628
Query: 497 ---PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLF 552
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 DYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL 675
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L+
Sbjct: 676 QEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHLI 735
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 LYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLT 795
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 KTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 828
>gi|403216105|emb|CCK70603.1| hypothetical protein KNAG_0E03460 [Kazachstania naganishii CBS
8797]
Length = 902
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/616 (41%), Positives = 354/616 (57%), Gaps = 94/616 (15%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL
Sbjct: 250 VPVVIDPKLSKILRPHQVEGVKFLYRCVTGLAMKDFMDAEKLNTMKEPSQLPPQLEPEGK 309
Query: 204 ----NAA------------GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAI 247
N+A G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K I
Sbjct: 310 SPAKNSAKEPVAEVVPARRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCI 369
Query: 248 IVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTDPCSSLQ-------- 298
IV P+SLV+NW E+ KW+G G + +A+ + + +VSG + ++ +
Sbjct: 370 IVCPSSLVNNWANELVKWLGPGTLSPLAI-DGKKSSLVSGSSTVSEAVHAWAQAKGRNVV 428
Query: 299 --VLIVSYETFRMHSSKFSCSESCD--LLICDEAHRLKNDQTLTN--------------- 339
VLI+SYET R + + ++C+ L++ DE HRLKN +LT
Sbjct: 429 KPVLIISYETLRRNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILS 485
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+NDL E+FA++NF+NPG+LG A FR+ +E I+ GR+ AT++E K + +L
Sbjct: 486 GTPIQNDLSEYFALLNFSNPGLLGTRAEFRKNFELPILRGRDAGATDKEIKKSEGQLEKL 545
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
S V++FI+RRTN +LS +LP K V+ L P Q LY + S++VK+ + E S
Sbjct: 546 SNVVSKFIIRRTNDILSKYLPCKYEHVIFVNLKPFQHHLYKELLESRSVKKTTNGEGG-S 604
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
+ L I LKKLCNHP LI + G + D ++ P F G +
Sbjct: 605 QPLQAIGILKKLCNHPNLIEFEKEFGE----DYPDKLQIPPNYNFPG-----SKSRDVQT 655
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
E SGK +L R L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT +I+KR
Sbjct: 656 EFSGKFSILQRFLHKIKTESDDKIVLISNYTQTLDLIERMCRYQHYGSVRLDGTMTINKR 715
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
Q LV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQ
Sbjct: 716 QNLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQ 775
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
KK FIYRF++TG+IEEK++QRQ K L + D+ S +L+ LF F
Sbjct: 776 KKDCFIYRFITTGSIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSANNLKQLFQFK 831
Query: 696 DDVRSEIHENMHCTRC 711
++ E HE HC RC
Sbjct: 832 ENTICETHETYHCKRC 847
>gi|67967643|dbj|BAE00304.1| unnamed protein product [Macaca fascicularis]
Length = 644
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/576 (43%), Positives = 353/576 (61%), Gaps = 68/576 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 19 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGRCGAILADEMGLGKTLQCISLIW 77
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 78 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 131
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 132 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTAALI 184
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 185 SLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 244
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI V+ C+ LQ ELY ++S+ V
Sbjct: 245 KELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVV 304
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-------TGFEDCIRFFP- 496
+ + + S L I ALKKLCNHP L++++IK T + ++ + FP
Sbjct: 305 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPA 364
Query: 497 ---PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLF 552
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 365 DYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNVL 411
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG GLNLIGG+ L+
Sbjct: 412 QEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHLI 471
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 472 LYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLT 531
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 532 KTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 564
>gi|195550742|ref|XP_002076092.1| GD12001 [Drosophila simulans]
gi|194201741|gb|EDX15317.1| GD12001 [Drosophila simulans]
Length = 783
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/517 (44%), Positives = 337/517 (65%), Gaps = 40/517 (7%)
Query: 218 GLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
GLGKTLQ + L++TLL QG + KP + KAI+V+P+SLV NWE E KW+ GR+ + +
Sbjct: 187 GLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEG 246
Query: 278 STRDDVVSGIDSFTDPCSSL--QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
T+++ + ++ F+ + L VL++SYETFR+++ + C ++ICDE HRLKN
Sbjct: 247 GTKENTIRALEQFSMTSARLGTPVLLISYETFRIYA-EILCKYEVGMVICDEGHRLKNSD 305
Query: 336 TLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
LT + NDL E++++VNF NP +LG AA F+R +E++I+ G+
Sbjct: 306 NLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQ 365
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
+TE E++ IE++ EL V+Q I+RRTN +L+ +LP K V+C KLT +Q ELY
Sbjct: 366 NTDSTEAERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYT 425
Query: 437 HFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRF 494
+F+ S V+R++++ +++ + LA IT LKK+C+HP LIY+ + + GFE+
Sbjct: 426 NFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTARE---KGFENSQNV 482
Query: 495 FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
P ++ D ELSGK +L +L +R +D++VL+SNYTQTLDLF Q
Sbjct: 483 LP--------SNYKPKDLN-PELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQ 533
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
L R+R+Y ++RLDGT SI KR K+V+ FNDP + F+F+LSSKAGGCGLNLIG NRL +F
Sbjct: 534 LARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMF 593
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNPAND+QA ARVWRDGQKK +IYR +++G+IEEK+ QRQ K+ L I D
Sbjct: 594 DPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTI----ID 649
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
++ + + +DL+DLFTF D+ S+ H+ + C RC
Sbjct: 650 NNESAEKHFTRDDLKDLFTFDADILSDTHDKLKCKRC 686
>gi|67475316|ref|XP_653352.1| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
gi|56470295|gb|EAL47966.1| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 884
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/580 (43%), Positives = 349/580 (60%), Gaps = 58/580 (10%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
D +VL+QP V + VDPLL LRPHQ+ GV+FM++CV GL +GCIL
Sbjct: 246 DAVVLYQPTVTSRKE---VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFKGNGCIL 302
Query: 214 ADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG---RV 270
AD MGLGKT+Q++ L++TLL QG +G+P KK ++V P+SLV NWE E KKW+G RV
Sbjct: 303 ADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAPRV 362
Query: 271 QLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHR 330
++ + D +S +D +++++SY+ R+H K + LLICDE HR
Sbjct: 363 VGVSCSGAKTDQAISDMDF-----GYAEIMVISYDQLRIHIDKIEKIKGWGLLICDEGHR 417
Query: 331 LKN---------DQTLTNR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
LKN ++ T R N+L EF+AMV+F NP +LG + F+R YE
Sbjct: 418 LKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRIYEEP 477
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I+ R+ T EEK G +RS EL+ FILRRT+ + +LPPK+ VV C LTPLQ
Sbjct: 478 IMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYLPPKVQHVVFCSLTPLQ 537
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
++Y + KN + E K+S +TALKK+ NHP LI D +K+
Sbjct: 538 KKIYTALCNLKNKPKGKDE--KKSCQFQILTALKKVSNHPWLIQDFVKT----------- 584
Query: 492 IRFFPPEMFSGRSGSWTGGDGAW-VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
FP + G GD W +ELSGK LA+LL LR+ + +IV+VSNYT+TL+
Sbjct: 585 ---FPEVL----DGILPKGDALWDMELSGKTAFLAKLLAFLRKHKE-KIVIVSNYTETLN 636
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
A C++ YPY++LDG+ + +KR ++VN FN+P +EF+FLLSSKAGGCGLNL+GG
Sbjct: 637 FIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGGCGLNLVGGAN 696
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ 669
LV+FDPDWNPAND+QA RVWRDGQKK+ IYR LS GT+EEK+YQRQ+ K L KV++
Sbjct: 697 LVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVE 756
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
+ +T + L++L + D E H+ + CT
Sbjct: 757 GGDDNDEST----FDDKQLKELCAYKDTA-CETHDLLGCT 791
>gi|149045437|gb|EDL98437.1| similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog
of, B (predicted), isoform CRA_b [Rattus norvegicus]
Length = 819
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 274/691 (39%), Positives = 386/691 (55%), Gaps = 92/691 (13%)
Query: 74 PRVLSVTEGAAVCRKPFKPPCSNGY---DNGNDQLARRLCARKRFVPWGSSRPVLVTIT- 129
P V S PFK C + D GND W + +P T
Sbjct: 126 PAVPSSQAARKCFSNPFKSVCQSTQARRDRGND--------------WQNCKPRYDPYTP 171
Query: 130 NRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQR 189
N L +PR +++ N + P VD + +DP LVR LRPHQ+
Sbjct: 172 NALVMPRPDKSHQWAFNRSCLPTVD-------------------VVIDPHLVRHLRPHQK 212
Query: 190 EGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAII 248
+GV F++ECV G+ A G G ILAD+MGLGKTLQ I+L++TL CQG + GKP+VK+ +I
Sbjct: 213 DGVAFLYECVMGM-RAVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIVKRTLI 271
Query: 249 VTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF 307
VTP SLV+NW E +KW+G R+++ + D ++ F + VLI+SYE
Sbjct: 272 VTPGSLVNNWRKEFQKWLGSERIKIFTV------DQDHKVEEFINSAFH-SVLIISYEML 324
Query: 308 -----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDL 343
R+ + F LLICDE HRLKN T +NDL
Sbjct: 325 LRSLDRIKTITFG------LLICDEGHRLKNSGIKTTAALSSLSCEKRVILTGTPVQNDL 378
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
+EFFA+V+F NPGILG + +RR YE I+ REP+A++EE++LG R++EL+ FI
Sbjct: 379 QEFFALVDFVNPGILGSLSSYRRIYEEPIVMSREPSASKEERELGERRTTELTRLTGCFI 438
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRT +++ +LPPKI VV C+ LQ ELY + S++V+ + S L I A
Sbjct: 439 LRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLSSQSVRFCLQGLLGNSAHLICIGA 498
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
LKKLCNHP+L++ +K ++ E+ R + + + + E SGK+ V
Sbjct: 499 LKKLCNHPRLLFSFVKGKEFNSSRDENEERSLCQGLLTVFPAGYNLLQLSESE-SGKLQV 557
Query: 524 LARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
L +LL + + R ++++LVSNY QTL+L ++C+ Y RLDG T +S+RQ++V++F
Sbjct: 558 LVKLLAAISELRPTEKVILVSNYRQTLNLLEEVCKCHGYACARLDGQTPVSQRQQIVDNF 617
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N +F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA ARVWRDGQK V +Y
Sbjct: 618 NSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMARVWRDGQKHPVHVY 677
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEI 702
R L+TGTIEEK+YQRQ+SK+GL + S Q S E+L++LFT H++
Sbjct: 678 RLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEQIQ---FSVEELKNLFTLHENSHCVT 734
Query: 703 HENMHCTRCQNYDDGAESIGEGDETNSANKN 733
H+ + C E GE D ++ A++N
Sbjct: 735 HDLLDC----------ECTGEKDHSDDASEN 755
>gi|449702030|gb|EMD42742.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
histolytica KU27]
Length = 884
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/580 (43%), Positives = 348/580 (60%), Gaps = 58/580 (10%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
D +VL+QP V + VDPLL LRPHQ+ GV+FM++CV GL +GCIL
Sbjct: 246 DAVVLYQPTVTSRKE---VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFKGNGCIL 302
Query: 214 ADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG---RV 270
AD MGLGKT+Q++ L++TLL QG +G+P KK ++V P+SLV NWE E KKW+G RV
Sbjct: 303 ADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAPRV 362
Query: 271 QLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHR 330
++ + D +S +D +++++SY+ R+H K + LLICDE HR
Sbjct: 363 VGVSCSGAKTDQAISDMDF-----GYAEIMVISYDQLRIHIDKIEKIKGWGLLICDEGHR 417
Query: 331 LKN---------DQTLTNR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
LKN ++ T R N+L EF+AMV+F NP +LG + F+R YE
Sbjct: 418 LKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRIYEEP 477
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I+ R+ T EEK G +RS EL+ FILRRT + +LPPK+ VV C LTPLQ
Sbjct: 478 IMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTAKVNQKYLPPKVQHVVFCSLTPLQ 537
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
++Y + KN + E K+S +TALKK+ NHP LI D +K+
Sbjct: 538 KKIYTALCNLKNKPKGKDE--KKSCQFQILTALKKVSNHPWLIQDFVKT----------- 584
Query: 492 IRFFPPEMFSGRSGSWTGGDGAW-VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
FP + G GD W +ELSGK LA+LL LR+ + +IV+VSNYT+TL+
Sbjct: 585 ---FPEVL----DGILPKGDALWDMELSGKTAFLAKLLAFLRKHKE-KIVIVSNYTETLN 636
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
A C++ YPY++LDG+ + +KR ++VN FN+P +EF+FLLSSKAGGCGLNL+GG
Sbjct: 637 FIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGGCGLNLVGGAN 696
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ 669
LV+FDPDWNPAND+QA RVWRDGQKK+ IYR LS GT+EEK+YQRQ+ K L KV++
Sbjct: 697 LVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVE 756
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
+ +T + L++L + D E H+ + CT
Sbjct: 757 GGDDNDEST----FDDKQLKELCAYKDTA-CETHDLLGCT 791
>gi|407041035|gb|EKE40490.1| DNA repair protein, putative [Entamoeba nuttalli P19]
Length = 883
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/580 (43%), Positives = 348/580 (60%), Gaps = 58/580 (10%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
D +VL+QP V + VDPLL LRPHQ+ GV+FM++CV GL +GCIL
Sbjct: 246 DAVVLYQPTVTSRKE---VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFKGNGCIL 302
Query: 214 ADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG---RV 270
AD MGLGKT+Q++ L++TLL QG +G+P KK ++V P+SLV NWE E KKW+G RV
Sbjct: 303 ADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGNAAPRV 362
Query: 271 QLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHR 330
++ + D +S +D +++++SY+ R+H K + LLICDE HR
Sbjct: 363 VGVSCSGAKTDQAISDMDF-----GYAEIMVISYDQLRIHIDKIEKIKGWGLLICDEGHR 417
Query: 331 LKN---------DQTLTNR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
LKN ++ T R N+L EF+AMV+F NP +LG + F+R YE
Sbjct: 418 LKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRIYEEP 477
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I+ R+ T EEK G +RS EL+ FILRRT+ + +LPPK+ VV C LTPLQ
Sbjct: 478 IMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYLPPKVQHVVFCSLTPLQ 537
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
++Y KN + E K+S +TALKK+ NHP LI D +K+
Sbjct: 538 KKIYTALCTLKNKPKGKDE--KKSCQFQILTALKKVSNHPWLIQDFVKT----------- 584
Query: 492 IRFFPPEMFSGRSGSWTGGDGAW-VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
FP + G G+ W +ELSGK LA+LL LR+ + +IV+VSNYT+TL+
Sbjct: 585 ---FPEVL----DGVLPKGEALWDMELSGKTAFLAKLLAFLRKHKE-KIVIVSNYTETLN 636
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
A C++ YPY++LDG+ + +KR ++VN FN+P +EF+FLLSSKAGGCGLNL+GG
Sbjct: 637 FIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGGCGLNLVGGAN 696
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ 669
LV+FDPDWNPAND+QA RVWRDGQKK+ IYR LS GT+EEK+YQRQ+ K L KV++
Sbjct: 697 LVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVE 756
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
+ +T + L++L + D E H+ + CT
Sbjct: 757 GGDDNDEST----FDDKQLKELCAYKDTA-CETHDLLGCT 791
>gi|431917856|gb|ELK17087.1| DNA repair and recombination protein RAD54B [Pteropus alecto]
Length = 910
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/591 (42%), Positives = 357/591 (60%), Gaps = 71/591 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + +DP LV LRPHQ+EG+ F++ECV G+ G ILAD+MGLGKTLQ I+L++
Sbjct: 283 VVDVVIDPHLVYHLRPHQKEGIIFLYECVMGM-RVNSRCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIYTV------DQDHKVE 395
Query: 289 SFT-DPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
F P S VLI+SYE ++ KF DLLICDE HRLKN T
Sbjct: 396 EFIKSPFYS--VLIISYEMLLRSLDQIKHIKF------DLLICDEGHRLKNSTIKTTTAL 447
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL+EFFA+++F NPGILG + +R+ YE II R+P+A+EE
Sbjct: 448 ISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIISRQPSASEE 507
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EK+LG R++EL+ F LRRT +++ +LPPKI VV C+ LQ ELY ++S+
Sbjct: 508 EKELGERRAAELTCLTGLFFLRRTQEVINKYLPPKIENVVFCQPGALQIELYRKLLNSQA 567
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFF 495
V+ + + S L I ALKKLCNHP L+++++K +T +E I F
Sbjct: 568 VRFCLEGLLENSPHLICIGALKKLCNHPCLLFNSVKEKECSSTWDENEEKSLYEGLINVF 627
Query: 496 P----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLD 550
P P +F+ + SGK+ VL +LL + + R +++VLVSNYTQTL+
Sbjct: 628 PADYNPLLFTEKE-------------SGKLQVLTKLLAVIHELRPTEKVVLVSNYTQTLN 674
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ ++C+ Y Y RLDG T IS+RQ++V+ FN ++F+FLLSSKAGG GLNLIGG+
Sbjct: 675 ILQEICKRHGYAYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSH 734
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 735 LILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVD 794
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S Q S E+L++LFT ++ H+ ++C D +S+
Sbjct: 795 LTRTSEYMQ---FSVEELKNLFTLNESSHCITHDLLNCDCTGEQDHTGDSL 842
>gi|156379220|ref|XP_001631356.1| predicted protein [Nematostella vectensis]
gi|156218395|gb|EDO39293.1| predicted protein [Nematostella vectensis]
Length = 836
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 287/707 (40%), Positives = 387/707 (54%), Gaps = 98/707 (13%)
Query: 130 NRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQR 189
N L LPR ++ + N ++ P VD + VDP L + LRPHQR
Sbjct: 190 NALALPRPSASHQLANNKSVQPLVD-------------------VVVDPHLGQHLRPHQR 230
Query: 190 EGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAII 248
+GV F++ECV GL N G +G ILAD+MGLGKTLQ IAL++TL QG + G+P+ + +I
Sbjct: 231 DGVLFLYECVMGLRNFNG-NGAILADEMGLGKTLQCIALIWTLHKQGPYGGQPVCNRILI 289
Query: 249 VTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF 307
+TP SLV NW AE +KW+G R+++ + R V I S P VLI+SYE F
Sbjct: 290 ITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMR--VKEFIISPIYP-----VLIISYEMF 342
Query: 308 RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFA 348
+ S + DL ICDEAHRLKN T +NDL+EF
Sbjct: 343 -IRSQDDIMNIKFDLFICDEAHRLKNSAIKTTTLISGLKTRRRVLLTGTPIQNDLKEFHT 401
Query: 349 MVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTN 408
++ NPG+LG FRR YE I+ G++P AT E+K LG R+SEL+ F LRRT+
Sbjct: 402 LIELCNPGVLG--TLFRRVYEQPIVNGQQPGATSEDKLLGQTRASELNRLTRLFFLRRTS 459
Query: 409 ALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLC 468
+ +LPPK+ VV C+ LQ LY H + S+ ++ + S L I ALKKLC
Sbjct: 460 EINEKYLPPKVEMVVFCRPAHLQVTLYRHLLTSRFLRGCLRASCPSSTHLECIGALKKLC 519
Query: 469 NHPKLIYDTIKSGNPGTTGFEDCIRFFP------PEMFSGRSGSWTGGDGAWVELSGKMH 522
NHP L+Y + N T G ED + + PE S + SGK+
Sbjct: 520 NHPTLLYSASQGAN--TLGDEDQVSLYDGLLKLFPECNDASELS--------IAQSGKLT 569
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +L + T +R+VLVSNY+QTLD+ +LC ++Y YLRLDG+T +KRQ LV F
Sbjct: 570 VLNSMLEEI-HCTGERVVLVSNYSQTLDILQKLCTVKKYRYLRLDGSTPTAKRQSLVERF 628
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N +FVFLLSSKAGG GLNLIG +RL+L+D DWNPAND QA ARVWRDGQ++RV IY
Sbjct: 629 NAKHCQDFVFLLSSKAGGVGLNLIGASRLILYDIDWNPANDLQAMARVWRDGQRRRVVIY 688
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEI 702
R L+TGTIEEK+YQRQ +K+GL + D + +F S ED++DLFT +
Sbjct: 689 RLLTTGTIEEKIYQRQTTKQGLSGAVAD---DRKQVKVDF-SQEDVKDLFTLDELTVCST 744
Query: 703 HENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQ 762
H+ + C RC N+ Q+++E C + +EK+
Sbjct: 745 HDLLQCQRC-------------------NRVQQAEKEPDPSCVQTMTRACQLGMPPTEKK 785
Query: 763 LGTPLEEDLNNWGHHFYSMSVP----DAILQASAGDEVTFVFTNQVD 805
+ + E L W H + + DAIL+A D +TFVF N+V+
Sbjct: 786 MNVSIAE-LMKWQHFPSPLCLTELCDDAILRAE--DHITFVFRNEVN 829
>gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Komagataella pastoris CBS 7435]
Length = 838
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/620 (41%), Positives = 357/620 (57%), Gaps = 51/620 (8%)
Query: 132 LDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNL-----VPITVDPLLVRFLRP 186
L++ R + +N + PG L + DG +L VP+ +DP L + LRP
Sbjct: 193 LEMERKKAEQITNKNKRIKPGKS---LAEILGIAKDGSSLKKYPNVPVVIDPKLAKILRP 249
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
HQ GV+F+F C SGL++A+ GCI+AD+MGLGKTLQ IALL+TLL Q G ++KA
Sbjct: 250 HQISGVKFLFRCTSGLVDASA-KGCIMADEMGLGKTLQCIALLWTLLRQSPRGTKTIEKA 308
Query: 247 IIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-CESTRDDVVSGIDSFTDPCSSLQ----VL 300
I+V P+SLV NW E KW+G G + +A+ +S + +S S + VL
Sbjct: 309 IVVCPSSLVKNWANEFDKWLGKGTLTPLAIDGKSAKGSTISSQLSQWAMATGRNIVRPVL 368
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RN 341
IVSYET R + ++ L++ DE HRLKN +LT +N
Sbjct: 369 IVSYETLRRNVESLKGTK-VGLMLADEGHRLKNGDSLTFTALNSLDCERRVILSGTPIQN 427
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DL E+F+++ F NPG+LG FR+ YE I+ GR+ A ++E++ G ++ EL+ V +
Sbjct: 428 DLSEYFSLLTFANPGLLGTRNEFRKNYENPILRGRDSLADDKEREKGDQKLKELTEIVAR 487
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FI+RRTN +LS +LP K V+ C L+ Q LY F SK++ + + E ++ L I
Sbjct: 488 FIIRRTNDILSKYLPVKYEYVIFCNLSETQKSLYQRFTASKSISKLVKEVGGGAQSLQSI 547
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
LKKLC HP L+ E C P + G W S K
Sbjct: 548 GLLKKLCTHPNLLN--------LPEDIEGCENLLPDDYDYGHGNRRNREVQVW--HSSKF 597
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L R L + + T+D+IV++SNYTQTLDL +LC RY LRLDGT +I+KRQKLV+
Sbjct: 598 LILQRFLYKINKETNDKIVIISNYTQTLDLIEKLCISSRYGSLRLDGTMNINKRQKLVDK 657
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
FN+P EFVFLLSSKAGGCG+NLIG NRL+L DPDWNPA+D+QA ARVWRDGQ K FI
Sbjct: 658 FNNPEGKEFVFLLSSKAGGCGINLIGANRLILVDPDWNPASDQQALARVWRDGQTKNCFI 717
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YRF++TG+IEEK++QRQ +K L + DS+ S ++L+ LF F ++ SE
Sbjct: 718 YRFIATGSIEEKIFQRQSAKLQLSSCV----VDSNDDVERLFSADNLKQLFQFKENTFSE 773
Query: 702 IHENMHCTRCQNYDDGAESI 721
H +C RC + DG + I
Sbjct: 774 THSTYNCKRC--HPDGKQFI 791
>gi|167378232|ref|XP_001734726.1| DNA repair and recombination protein RAD54B [Entamoeba dispar
SAW760]
gi|165903652|gb|EDR29108.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
dispar SAW760]
Length = 884
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/584 (43%), Positives = 349/584 (59%), Gaps = 58/584 (9%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P D +VL+QP V + VDPLL LRPHQ+ GV+FM++CV GL +
Sbjct: 242 PNDPDAVVLYQPTVTSRKE---VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFRGN 298
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG- 268
GCILAD MGLGKT+Q++ L++TLL QG +G+P KK ++V P+SLV NWE E KKW+G
Sbjct: 299 GCILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDA 358
Query: 269 --RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
RV ++ + D +S +D +++++SY+ R+H K + LLICD
Sbjct: 359 APRVVGVSCSGAKTDQAISDMDF-----GYAEIMVISYDQLRIHIDKIEKIKGWGLLICD 413
Query: 327 EAHRLKN---------DQTLTNR----------NDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLKN ++ T R N+L EF+AMV+F NP +LG + F+R
Sbjct: 414 EGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRI 473
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
YE I+ R+ T EEK G +RS EL+ FILRRT+ + +LPPK+ VV C L
Sbjct: 474 YEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYLPPKVQHVVFCSL 533
Query: 428 TPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
TPLQ ++Y KN + E K+S +TALKK+ NHP LI D +K+
Sbjct: 534 TPLQKKIYTALCTLKNKPKGKDE--KKSCQFQILTALKKVSNHPWLIQDFVKT------- 584
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDGAW-VELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
FP + G G+ W +ELSGK LA+LL LR+ + +IV+VSNYT
Sbjct: 585 -------FPEVL----DGILPKGEALWDMELSGKTAFLAKLLAFLRKHKE-KIVIVSNYT 632
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
+TL+ A C++ YPY++LDG+ + +KR ++VN FN+P +EF+FLLSSKAGGCGLNL+
Sbjct: 633 ETLNFIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGGCGLNLV 692
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ- 665
GG LV+FDPDWNPAND+QA RVWRDGQKK+ IYR LS GT+EEK+YQRQ+ K L
Sbjct: 693 GGANLVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAG 752
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
KV++ + +T + L++L + D E H+ + CT
Sbjct: 753 KVVEGGDDNDEST----FDDKQLKEL-CIYKDTACETHDLLGCT 791
>gi|294462184|gb|ADE76644.1| unknown [Picea sitchensis]
Length = 407
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/408 (60%), Positives = 282/408 (69%), Gaps = 20/408 (4%)
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
MHVLARLL HL +TDDRIVLVSNYTQTLDLFAQ+CRER YP+LRLDGTTSI KR+KLV
Sbjct: 1 MHVLARLLAHLFTKTDDRIVLVSNYTQTLDLFAQICRERNYPFLRLDGTTSIGKRRKLVQ 60
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FNDPS+NEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV+
Sbjct: 61 RFNDPSQNEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVY 120
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRS 700
IYRFL+TGTIEEKVYQRQMSKEGLQKV+QQ QTD +Q N S EDLRDLFT D +RS
Sbjct: 121 IYRFLTTGTIEEKVYQRQMSKEGLQKVVQQGQTDDPKSQVNSFSIEDLRDLFTLQDSIRS 180
Query: 701 EIHENMHCTRCQNYDDGAESIGEGDETNS--ANKNDQSDQEVTDIGGFAGLAGCLHKLKS 758
EIHENM C RC+ D +G+ + T S A K D E +DIG FA ++GCL K
Sbjct: 181 EIHENMDCQRCKQ--DVLRELGDSENTGSDLAPKLIPDDYETSDIGDFAKISGCLLKQSY 238
Query: 759 SEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIES---KV 815
SEKQLGTPLEEDL +W HH + +VPD +LQA+AGD+V+FVFTNQVDGKLVPIES KV
Sbjct: 239 SEKQLGTPLEEDLQSWAHHKFPATVPDLVLQAAAGDDVSFVFTNQVDGKLVPIESAERKV 298
Query: 816 SPKMQATEGNKNPNNHITNPKPKLDQRSKLLSQHH-----KLLKDVPSLENSAKFSLSAS 870
+ + + K Q S +LSQ + + S++ K S
Sbjct: 299 LGQKGCVVKRQTQFGKLLGTKTCQLQESTVLSQQQVNSFPRTGQQSGSIDLIEKRSNLHR 358
Query: 871 SQPKSMRTSLKGAIKPKLSFGN--------QLPLKRFSPDNVEHDDDF 910
K ++S G KLS N QLP+KR + DDDF
Sbjct: 359 LSNKMSKSSCMGNSDFKLSRPNVSHVVQKSQLPVKRMFSEANGLDDDF 406
>gi|146087788|ref|XP_001465905.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
gi|134070006|emb|CAM68336.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
Length = 1126
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 289/771 (37%), Positives = 411/771 (53%), Gaps = 109/771 (14%)
Query: 91 KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLP 150
KP S G N + R+R P +V + R P+ +N +I ++ L
Sbjct: 343 KPGMSFGNSLSNCSAFASILFRRR--PKDGETGFVVPVAGR---PKMGKNGIIMDD--LH 395
Query: 151 PGVDP-----LVLWQPEEPQN-DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P DP +VL++ + ++ G V + VDP++ LRPHQ GV+F+F+C++G
Sbjct: 396 PLHDPDREKAVVLFRADYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGE-R 454
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G HG ILAD+MGLGKT+Q++A +YT L QG G+P +K ++VTP+SLV NW E K
Sbjct: 455 MLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDK 514
Query: 265 WVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
W+G G V+ A+ EST D ++S D D VL++SY+ R + + S S +
Sbjct: 515 WLGEGAVRHFAISESTPKGDRIISRFDGDGD------VLVISYDQLRKYIDRLSGLRSVE 568
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + T + NDL EF AMVNF NPGILG+
Sbjct: 569 LVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRD 628
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F R +E + GR+P + K LG +R+ LS +FILRRT ++ ++LPPK+
Sbjct: 629 LFARVFEEPVSLGRDPGCPDHLKSLGRDRAHYLSVLTQRFILRRTQSINESYLPPKVDVT 688
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI---- 478
V +L Q Y K A E+ + L I+AL+KLCNH L +D +
Sbjct: 689 VFVRLGEKQELAYQ--------KLADVVESAECTPLVLISALRKLCNHMDLFHDAVHLSH 740
Query: 479 KSGNP--------------GTTGFEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGK 520
+ GN G + R P P+ F + GS + V+ K
Sbjct: 741 QIGNSAGALAQQQQAGRRRGRSSAAGESRGIPLSVLPKGF--KPGSLS------VDCGSK 792
Query: 521 MHVLARLLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
MH ++ +L L++ + D++V+VSN+TQTLD+ A LC ++ Y +LDG+T I KRQ+LV
Sbjct: 793 MHFVSLVLDELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLV 852
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
++FN P E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRV
Sbjct: 853 DYFNVPGSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRV 912
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
FIYR LSTGTIEEK+YQRQ+SK+GL + Q DS + E+L+ LF + D
Sbjct: 913 FIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSK----QHFTLEELKSLFKYKADTL 968
Query: 700 SEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSS 759
+ H+ + CT C+ AES+ + + ++ + +G
Sbjct: 969 CDTHDLLGCTSCE----AAESLAASGRGSRGKQAEELKMQFRKVG--------------Q 1010
Query: 760 EKQLGTPLEEDLNNWGH-----HFYSMSVPDAILQASAGDEVTFVFTNQVD 805
K+ P ++L W H F SV A+ + A ++F+F ++ D
Sbjct: 1011 PKKKSGPRMDELKAWRHISAVASFNLDSVTRAVAK-HAPSLLSFLFADERD 1060
>gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1]
Length = 827
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/559 (43%), Positives = 341/559 (61%), Gaps = 43/559 (7%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ VDP L LRPHQREGV+F+ ECV+G + GCILADDMGLGKTLQ I++++T
Sbjct: 196 VPLVVDPHLSTILRPHQREGVRFVIECVAGCKSDLEGTGCILADDMGLGKTLQCISVVWT 255
Query: 232 LLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSF 290
LL QGFDGKP+ ++A+I+ P SLV NWEAE +KW+G R++ A+ + + + V +F
Sbjct: 256 LLKQGFDGKPLCQRALIICPGSLVKNWEAEFRKWLGVERIKTFAISSANKLEHVQQAKAF 315
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------- 340
V+IVSYE + + D++ICDEAHRLKN T R
Sbjct: 316 P-------VVIVSYEMY-LRCMDLLKQVRFDVVICDEAHRLKNANAKTTRILSGLATRRR 367
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
NDL+EFF +V+F NPG+ G +A F+R YET I+ R+ AT EK LG R
Sbjct: 368 IALTGTPVQNDLQEFFTLVDFVNPGLFGSSAKFKRLYETPIVRARQHDATPAEKDLGEAR 427
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
+ EL+ +++F+LRRT + + +LPPK VV C+ TPLQ +LY I ++ V+ ++
Sbjct: 428 AEELNRTIHEFVLRRTKEVNAAYLPPKTDYVVFCQPTPLQLQLYQRLIATQFVRSCMNAV 487
Query: 452 TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE----DCIRFFPPEMFSGRSGSW 507
++ L I AL+ LCN P L+ +S N + F+ D R P G +
Sbjct: 488 RGGTRHLLVIAALRMLCNAPSLLAGR-QSANVADSDFDRVLKDVRRLLP-----GSDDND 541
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
+E SGK+ ++ +L R++TD+R +LVSN T+ LD+ LC +P+LRL
Sbjct: 542 VAARTTLLEGSGKVALVRHMLRQWREKTDERALLVSNSTRCLDILQLLCEAEGWPFLRLQ 601
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G+T +R ++VN FN ++FVFL+SSKAGG GLN++G +RLVLFD DWNP++D QA
Sbjct: 602 GSTPTHQRLEMVNRFNARHHDDFVFLMSSKAGGVGLNIVGASRLVLFDTDWNPSHDLQAM 661
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
AR+WR+GQ + VFIYR ++TGTIEEK+YQRQ+ K L + +++ A ST+D
Sbjct: 662 ARIWREGQTRPVFIYRLVATGTIEEKIYQRQIVKSALGTTVMEDKETEQA-----FSTKD 716
Query: 688 LRDLFTFHDDVRSEIHENM 706
L++LF H DV SE + M
Sbjct: 717 LKELFQLHLDVASETVQLM 735
>gi|398015957|ref|XP_003861167.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
gi|322499392|emb|CBZ34465.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
Length = 1126
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 289/771 (37%), Positives = 411/771 (53%), Gaps = 109/771 (14%)
Query: 91 KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLP 150
KP S G N + R+R P +V + R P+ +N +I ++ L
Sbjct: 343 KPGMSFGNSLSNCSAFASILFRRR--PKDGETGFVVPVAGR---PKMGKNGIIMDD--LH 395
Query: 151 PGVDP-----LVLWQPEEPQN-DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P DP +VL++ + ++ G V + VDP++ LRPHQ GV+F+F+C++G
Sbjct: 396 PLHDPDREKAVVLFRADYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGE-R 454
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G HG ILAD+MGLGKT+Q++A +YT L QG G+P +K ++VTP+SLV NW E K
Sbjct: 455 MLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDK 514
Query: 265 WVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
W+G G V+ A+ EST D ++S D D VL++SY+ R + + S S +
Sbjct: 515 WLGEGAVRHFAISESTPKGDRIISRFDGDGD------VLVISYDQLRKYIDRLSGLRSVE 568
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + T + NDL EF AMVNF NPGILG+
Sbjct: 569 LVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRD 628
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F R +E + GR+P + K LG +R+ LS +FILRRT ++ ++LPPK+
Sbjct: 629 LFARVFEEPVSLGRDPGCPDHLKSLGRDRAHYLSVLTQRFILRRTQSINESYLPPKVDVT 688
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI---- 478
V +L Q Y K A E+ + L I+AL+KLCNH L +D +
Sbjct: 689 VFVRLGEKQELAYQ--------KLADVVESAECTPLVLISALRKLCNHMDLFHDAVHLSH 740
Query: 479 KSGNP--------------GTTGFEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGK 520
+ GN G + R P P+ F + GS + V+ K
Sbjct: 741 QIGNSAGALAQQQQAGRRRGRSSAAGESRGIPLSVLPKGF--KPGSLS------VDCGSK 792
Query: 521 MHVLARLLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
MH ++ +L L++ + D++V+VSN+TQTLD+ A LC ++ Y +LDG+T I KRQ+LV
Sbjct: 793 MHFVSLVLDELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLV 852
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
++FN P E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRV
Sbjct: 853 DYFNVPGSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRV 912
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
FIYR LSTGTIEEK+YQRQ+SK+GL + Q DS + E+L+ LF + D
Sbjct: 913 FIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSK----QHFTLEELKSLFKYKADTL 968
Query: 700 SEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSS 759
+ H+ + CT C+ AES+ + + ++ + +G
Sbjct: 969 CDTHDLLGCTSCE----AAESLAASGRGSRGKQAEELKMQFRKVG--------------Q 1010
Query: 760 EKQLGTPLEEDLNNWGH-----HFYSMSVPDAILQASAGDEVTFVFTNQVD 805
K+ P ++L W H F SV A+ + A ++F+F ++ D
Sbjct: 1011 PKKKSGPRMDELKAWRHISAVASFNLDSVTRAVAK-HAPSLLSFLFADERD 1060
>gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica]
gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica CLIB122]
Length = 807
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/607 (42%), Positives = 354/607 (58%), Gaps = 60/607 (9%)
Query: 143 IEENFTLPP--------GVDPLVLWQPEE-PQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+EE T+P G+ P +P+E P+ VP+ +DP L + LRPHQ EGV+
Sbjct: 171 VEEMRTIPKKLTLAEILGISPRDKQKPKEYPE------VPVVIDPKLAKILRPHQVEGVK 224
Query: 194 FMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTS 253
F++ +GL+N HGCI+AD+MGLGKTLQ IALL+TLL Q GK + KAI+V P+S
Sbjct: 225 FLYRATTGLINPKA-HGCIMADEMGLGKTLQCIALLWTLLKQSPQGKGTISKAIVVCPSS 283
Query: 254 LVSNWEAEIKKWVGGRVQLIALCESTRD--DVVSGIDSFTDPCS---SLQVLIVSYETFR 308
LV NW AE KW+G V + + ++ ++ +G+ + + + VLI+SY+T R
Sbjct: 284 LVRNWAAEFVKWLGEGVVVPYAVDGSQKPAELTAGLRQWAEAEGRKVTRPVLIISYDTLR 343
Query: 309 MHSSKFSCSESCDLLICDEAHRLKN--DQTLTN-----------------RNDLEEFFAM 349
+ SE LL+ DE H+LKN QT T +NDL E+F++
Sbjct: 344 RQVGAIADSE-VGLLLADEGHKLKNGDSQTFTALNQLNVKRRVILSGTPIQNDLLEYFSL 402
Query: 350 VNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNA 409
+NF+NPG+LG FR+ YE I+ GR+ T+++ + + E+++ V+ I+RRTN
Sbjct: 403 LNFSNPGLLGTKGEFRKNYEIPILKGRDADGTDKDVEKAEAKLLEMASIVSPLIIRRTND 462
Query: 410 LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE--TKQSKILAYITALKKL 467
+LS +LP K VV C L P Q LY F SK + + E ++ + L I LKKL
Sbjct: 463 ILSKYLPVKYEHVVFCNLAPFQKSLYVQFRTSKEARSLLKGEKSSEGTTTLNAIGILKKL 522
Query: 468 CNHPKLIY--DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
CNHP L+ D I E C + FP + ++ + + S K +L
Sbjct: 523 CNHPDLLKLPDEI----------EGCRKVFPDD-YAPPDERGSRDRDIYPHFSAKFLILE 571
Query: 526 RLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP 585
R+L + T+D+IV++SNYT TLDL ++CR+RRY LRLDGT +I+KR KLV FNDP
Sbjct: 572 RMLRSINAETNDKIVIISNYTATLDLIEKMCRQRRYGCLRLDGTMNINKRAKLVTQFNDP 631
Query: 586 SKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFL 645
EF+FLLSSKAGGCGLNLIG NRL+L DPDWNPA D+QA ARVWRDGQKK F+YR +
Sbjct: 632 EGQEFIFLLSSKAGGCGLNLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFVYRLI 691
Query: 646 STGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHEN 705
+TGTIEEK++QRQ K+ L + E D S +LR+LF++ D H+
Sbjct: 692 ATGTIEEKIFQRQSMKQSLSTCVVDEVQDVE----RHYSMSNLRELFSYDDATPCNTHDM 747
Query: 706 MHCTRCQ 712
C RC+
Sbjct: 748 YECKRCR 754
>gi|401841469|gb|EJT43853.1| RAD54-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 898
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/604 (42%), Positives = 346/604 (57%), Gaps = 83/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 259 VPVVIDPRLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNSSNEEPLKSDEKALSQS 318
Query: 204 -----NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
+ G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW
Sbjct: 319 QKTEGDNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFR 308
E+ KW+G + + + G + + + VLI+SYET R
Sbjct: 379 ANELVKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAVHAWAQAQGRNIVKPVLIISYETLR 438
Query: 309 MHSSKFSCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFF 347
+ + ++CD L++ DE HRLKN +LT +NDL E+F
Sbjct: 439 RNVDQL---KTCDIGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYF 495
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+++F+NPG+LG A FR+ +E I+ GR+ AT++E E+ +LS V++FI+RRT
Sbjct: 496 ALLSFSNPGLLGTRAQFRKNFEKPILRGRDADATDKEISKSEEQLQKLSTIVSKFIIRRT 555
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
N +LS +LP K V+ L PLQ++LYN I S+ VK+ + S+ L I LKKL
Sbjct: 556 NDILSKYLPCKYEHVIFVNLKPLQNDLYNKLIKSREVKKV-VKGVGGSQPLRAIGILKKL 614
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
C HP L+ F+D P+ +S + + + S K +L R
Sbjct: 615 CTHPNLLN--------FEDEFDDENDLDLPDDYSMPA---SKSRDVQTKYSAKFSILERF 663
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L +R +DD+IVL+SNYTQTLDL ++CR + Y RLDGT SI+KRQKLV+ FNDP
Sbjct: 664 LHKIRTESDDKIVLISNYTQTLDLIEKMCRYKHYSAARLDGTMSINKRQKLVDRFNDPEG 723
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+ST
Sbjct: 724 QEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 783
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK++QRQ K L + D+ S+++LR LF ++D E HE H
Sbjct: 784 GTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNEDTICETHETYH 839
Query: 708 CTRC 711
C RC
Sbjct: 840 CKRC 843
>gi|351713467|gb|EHB16386.1| DNA repair and recombination protein RAD54B, partial
[Heterocephalus glaber]
Length = 903
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/594 (42%), Positives = 359/594 (60%), Gaps = 74/594 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP +V LRPHQ+EG+ F++ECV G+ G +G ILAD+M LGKTLQ I+L++
Sbjct: 283 LVDVVIDPHVVHHLRPHQKEGIIFLYECVMGM-RMNGRYGAILADEMCLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP+++K++IVTP SLV+NW E KKW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIRKSLIVTPGSLVNNWRKEFKKWLGTERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSVF-YSVLIISYEMLLRSLEQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPG+LG A +R+ YE I+ REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGVLGSLASYRKIYEEPIVMSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI V+ C+ LQ ELY ++S+ +
Sbjct: 509 KELGERRAAELTRVTGLFILRRTQEVINKYLPPKIENVLFCRPATLQIELYKKLLNSQAI 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT--GFEDCIRF-----FPP 497
+ + + S L I ALKKLCNHP L++++IK + +T G E+ + + P
Sbjct: 569 RFCLQGSLENSPHLICIGALKKLCNHPCLLFNSIKGKDCSSTCDGNEEKSLYEEKTDYNP 628
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLC 556
+F + S K+ VLA+LL + + R +++VLVS+YTQTL++ +C
Sbjct: 629 LVFMEKDYS-------------KLQVLAKLLAVIHELRPTEKVVLVSHYTQTLNILQDVC 675
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
+ Y Y RLDG T IS+RQ++V++FN ++F+FLLSSKAGG GLNLIGG+ L+L+D
Sbjct: 676 KRYGYAYARLDGQTPISQRQQIVDNFNSKYSSDFIFLLSSKAGGVGLNLIGGSHLILYDI 735
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+ L + S
Sbjct: 736 DWNPATDIQAMSRVWRDGQKHAVHIYRLLTTGTIEEKIYQRQISKQALSGAVVDLTKISE 795
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
Q S E+L++LFT H+ H+ + C E GE D T+ +
Sbjct: 796 HIQ---FSVEELKNLFTLHESSHCVTHDLLDC----------ECTGEKDRTDDS 836
>gi|401422802|ref|XP_003875888.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492128|emb|CBZ27402.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1130
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 270/672 (40%), Positives = 374/672 (55%), Gaps = 76/672 (11%)
Query: 91 KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLP 150
KP S G N + R+R P +V + R P+ +N +I + L
Sbjct: 343 KPGMSFGNSLSNSSAFASILFRRR--PKDGETGFVVPVAGR---PKMGKNGIIMDE--LQ 395
Query: 151 PGVDP-----LVLWQPEEPQN-DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P DP +VL++ + ++ G V + VDP++ LRPHQ GV+F+F+C++G
Sbjct: 396 PLHDPDREKAVVLFRADYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGE-R 454
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G HG ILAD+MGLGKT+Q++A +YT L QG G P +K ++VTP+SLV NW E K
Sbjct: 455 MLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGHPTARKCLVVTPSSLVKNWCNEFDK 514
Query: 265 WVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
W+G G V+ A+ EST D ++S D D VL++SY+ R + + S S +
Sbjct: 515 WLGEGAVRHFAISESTPKGDRIISRFDGDGD------VLVISYDQLRKYIDRLSGLRSVE 568
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + T + NDL EF AMVNF NPGILG+
Sbjct: 569 LVVCDEGHRLKNAEVKTTKAVDMLPTRNRVILSGTPIQNDLSEFHAMVNFVNPGILGNRD 628
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F R +E + GR+P + K LG +R+ LS +FILRRT ++ ++LPPK+
Sbjct: 629 LFARVFEEPVSLGRDPECPDHLKSLGRDRAHYLSMLTQRFILRRTQSINESYLPPKVDVT 688
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI---- 478
V +L Q Y K A E+ + L I+AL+KLCNH L +D +
Sbjct: 689 VFVRLGEKQELAYQ--------KLADVVESAECTPLVLISALRKLCNHMDLFHDAVHLSH 740
Query: 479 KSGN-PGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS----------------GKM 521
+ GN G + + + + R S G+ + LS KM
Sbjct: 741 QIGNSAGASAQQQQQQQQQQQAGRRRGRSSAAGESKGIPLSVLPKGFKPGSLNMDCGSKM 800
Query: 522 HVLARLLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
H ++ +L L++ + D++V+VSN+TQTLD+ A LC ++ Y +LDG+T I KRQ+LV+
Sbjct: 801 HFVSLVLDELKRNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVD 860
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
+FN P E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKKRVF
Sbjct: 861 YFNVPGSQEVVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVF 920
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRS 700
IYR LSTGTIEEK+YQRQ+SK+GL + Q DS + E+L+ LF + D
Sbjct: 921 IYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSK----QHFTLEELKSLFKYKADTLC 976
Query: 701 EIHENMHCTRCQ 712
+ H+ + CT C+
Sbjct: 977 DTHDLLGCTSCE 988
>gi|255946938|ref|XP_002564236.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591253|emb|CAP97480.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 819
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 258/583 (44%), Positives = 342/583 (58%), Gaps = 53/583 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTL-------Q 224
VP+ +DP L + LRPHQ EGV+F++ CV+GL++ +GCI+AD MGLGKT+ +
Sbjct: 206 VPVVIDPRLSKVLRPHQVEGVKFLYRCVTGLVDKNA-NGCIMADGMGLGKTVSLGNPDFR 264
Query: 225 SIALLYTLLCQGFD--GKPMVKKAIIVTPTSLVSNWEAEIKKWVG--GRVQLIALCESTR 280
++ L T D V ++ + + + KW+G ++T+
Sbjct: 265 TLVLTNTASMHRIDVDATQAVLRSRKNHHSEMCDCMSVKFVKWLGKDATTPFAIDGKATK 324
Query: 281 DDVVSGIDSFTDPCSS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
+++S I + VLIVSYET RM++ + LL+CDE HRLKN ++L
Sbjct: 325 AELISQIKQWAIASGRGIVRPVLIVSYETLRMYADTLN-DTPIGLLLCDEGHRLKNKESL 383
Query: 338 T-------------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
T +NDL E+FA+++F NP +LG A FR+ +E I+ GR+
Sbjct: 384 TWTALNQLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQAEFRKRFELPILRGRDA 443
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
T+ EKKLG ER ELS VN+FI+RRTN LLS +LP K VV C ++ Q LYNHF
Sbjct: 444 AGTDAEKKLGDERLQELSGIVNKFIIRRTNELLSKYLPIKYEHVVFCNMSEFQRGLYNHF 503
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I S ++ + K S+ L I LKKLCNHP L+ + + PG C FP +
Sbjct: 504 IKSPEIQSLL--RGKGSQPLKAIGILKKLCNHPDLL--DLANDLPG------CEHAFPED 553
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
S +W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR
Sbjct: 554 YSPPDSRGRDRDIKSW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRS 611
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R Y LRLDGT +I KR KLV+ FN+P EFVFLLSSKAGGCGLNLIG NRLVLFDPDW
Sbjct: 612 RGYGSLRLDGTMNIKKRTKLVDTFNNPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDW 671
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + DS+
Sbjct: 672 NPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCV----VDSAED 727
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S + LR+LF F D RS+ H+ C RC+ DG + I
Sbjct: 728 VERHFSLDSLRELFQFKPDTRSDTHDTFKCKRCR--PDGTQYI 768
>gi|157870081|ref|XP_001683591.1| putative DNA repair and recombination protein RAD54 [Leishmania major
strain Friedlin]
gi|68126657|emb|CAJ04466.1| putative DNA repair and recombination protein RAD54 [Leishmania major
strain Friedlin]
Length = 1127
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 285/764 (37%), Positives = 404/764 (52%), Gaps = 94/764 (12%)
Query: 91 KPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLP 150
KP S G N + R+R P +V + R P+ +N +I + L
Sbjct: 343 KPGMSFGNSLSNSSAFASILFRRR--PKDGETGFVVPVAGR---PKMGKNGIIMDE--LH 395
Query: 151 PGVDP-----LVLWQPEEPQN-DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P DP +VL++ + ++ G V + VDP++ LRPHQ GV+F+F+C++G
Sbjct: 396 PLHDPDREKAVVLFRADYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGE-R 454
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G HG ILAD+MGLGKT+Q++A +YT L QG G+P +K ++VTP+SLV NW E K
Sbjct: 455 MLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDK 514
Query: 265 WVG-GRVQLIALCEST--RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
W+G G V+ A+ EST D ++S D D VL++SY+ R + + S S +
Sbjct: 515 WLGEGAVRHFAISESTPKGDRIISRFDGDGD------VLVISYDQLRKYIDRLSGLRSVE 568
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + T + NDL EF AMVNF NPGILG+
Sbjct: 569 LVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRD 628
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F R +E + GR+P + K LG +R+ LS +FILRRT ++ ++LPPK+
Sbjct: 629 LFARVFEEPVSLGRDPGCPDHLKSLGRDRARYLSVLTQRFILRRTQSINESYLPPKVDVT 688
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI---- 478
V +L Q Y K A E+ + L I+AL+KLCNH L +D +
Sbjct: 689 VFVRLGEKQELAYQ--------KLADVVESAECTPLVLISALRKLCNHMDLFHDAVHLSH 740
Query: 479 KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG-----------GDGAWVELSGKMHVLARL 527
+ GN + + S +G G G ++ KMH ++ +
Sbjct: 741 QIGNSAGASAQQQQQAGRRRGRSSAAGESQGIPLSVLPKGFRPGGLSMDCGSKMHFVSLV 800
Query: 528 LGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
L L+ + D++V+VSN+TQTLD+ A LC ++ Y +LDG+T I KRQ+LV++FN P
Sbjct: 801 LDELKGNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPG 860
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
E VFLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA RVWRDGQKK VFIYR LS
Sbjct: 861 SQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKCVFIYRLLS 920
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
TGTIEEK+YQRQ+SK+GL + Q DS + E+L+ LF + D + H+ +
Sbjct: 921 TGTIEEKIYQRQVSKQGLSANVVDMQEDSK----QHFTLEELKSLFKYKADTLCDTHDLL 976
Query: 707 HCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTP 766
CT C+ AES+ + + +Q + +G K+ P
Sbjct: 977 GCTSCE----AAESLATSGRGSRGKQAEQIKMQFRKVG--------------QPKKKSGP 1018
Query: 767 LEEDLNNWGH-----HFYSMSVPDAILQASAGDEVTFVFTNQVD 805
++L W H F SV A+ + A ++F+F ++ D
Sbjct: 1019 RMDELKAWRHISAVASFNLDSVTRAVAK-HAPSLLSFLFADERD 1061
>gi|401625828|gb|EJS43818.1| rad54p [Saccharomyces arboricola H-6]
Length = 907
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/605 (41%), Positives = 344/605 (56%), Gaps = 83/605 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP LV+ LRPHQ EGV+F++ CV+GL+
Sbjct: 266 VPVVIDPKLVKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSASEDPLKSDEKALT 325
Query: 204 -------NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVS 256
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+
Sbjct: 326 QSRKTEENNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVN 385
Query: 257 NWEAEIKKWVGGRVQLIALCESTRDDVVSG----IDSFTDPCSSLQ-------VLIVSYE 305
NW E+ KW+G L L + + G + + Q VLI+SYE
Sbjct: 386 NWANELIKWLGPNT-LTPLAVDGKKSSMGGANITVSQAIHTWAQTQGRNIVKPVLIISYE 444
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEF 346
T R + + S + L++ DE HRLKN +LT +NDL E+
Sbjct: 445 TLRRNVDQLKNS-NVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEY 503
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
FA+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS V++FI+RR
Sbjct: 504 FALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEIAKGEVQLQKLSTIVSKFIIRR 563
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
TN +LS +LP K V+ L PLQ+ LYN + S+ VK+ + + S+ L I LKK
Sbjct: 564 TNDILSKYLPCKYEHVIFVNLKPLQNSLYNKLLKSREVKKVV-KGIGGSQPLRAIGILKK 622
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
LCNHP L+ + + E+ S + + S K +L R
Sbjct: 623 LCNHPNLLNFEDEFDDEDDL-----------ELPDDYSMPSSKARDVQTKYSAKFAILER 671
Query: 527 LLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
L + +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT +I+KRQKLV+ FNDP
Sbjct: 672 FLHKINTESDDKIVLISNYTQTLDLIERMCRYKHYSAVRLDGTMTINKRQKLVDRFNDPE 731
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+S
Sbjct: 732 GQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIS 791
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
TGTIEEK++QRQ K L + D+ S+++LR LF +++ E HE
Sbjct: 792 TGTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNENTICETHETY 847
Query: 707 HCTRC 711
HC RC
Sbjct: 848 HCKRC 852
>gi|432908561|ref|XP_004077922.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oryzias latipes]
Length = 928
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/581 (44%), Positives = 348/581 (59%), Gaps = 63/581 (10%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + VDP L + LRPHQR+G+ F++ECV G+ A +G ILAD+MGLGKTLQS+AL +
Sbjct: 311 VVEVVVDPHLTQHLRPHQRDGLLFLYECVMGM-RVASCYGAILADEMGLGKTLQSVALSW 369
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TLL QG + GKP+ K+ ++VTP SLV NW+AE KW+G R+ + + + R I+
Sbjct: 370 TLLKQGPYGGKPVAKRVLVVTPGSLVQNWKAEFNKWLGRERISVFTVDQDHR------IE 423
Query: 289 SFT-DPCSSLQVLIVSYETFRMHSSKFSCSESCD-----LLICDEAHRLKNDQTLTN--- 339
F P S VL++SYE C E L+ICDE HRLKN T+
Sbjct: 424 QFVLSPLHS--VLVISYEML------LRCLEQVQKVEFGLIICDEGHRLKNSSIKTSSAL 475
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL+EF A++ F NPGILG +R+ YE I+ R+P+ TEE
Sbjct: 476 TSLSCDRRVILTGTPVQNDLQEFHAIIEFVNPGILGSPTAYRKLYEEPILRSRQPSCTEE 535
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E+ LG ER++ELS FILRRT +++ +LPP++ + C+ + LQ ELY + +
Sbjct: 536 ERVLGEERAAELSRLTGMFILRRTQEIINRYLPPRVDWTLFCEPSALQQELYQRLLCHRV 595
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIK----SGNPGTTGFEDCIRFFPPEM 499
+ + T+ S LA ITALKKLCNHP L+Y T+K SG ++ +E FP E
Sbjct: 596 FRDCMQGSTQTSTHLACITALKKLCNHPGLLYATVKERTESGTLESSLYERLADLFP-ET 654
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRE 558
+S + D SGK+ VL+ LL +RQ + DR+VLVSNYTQTLDL LC+
Sbjct: 655 YS--LAGFNTAD------SGKLLVLSDLLAAIRQLSPSDRVVLVSNYTQTLDLLQDLCKH 706
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
Y + RLDG T +RQ+LV+ FN F+FLLSSKAGG GLNLIG + LVL+D DW
Sbjct: 707 MGYTFCRLDGQTPTGQRQRLVDGFNSSYSQNFLFLLSSKAGGVGLNLIGASHLVLYDIDW 766
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPAND QA ARVWRDGQKK V IYR L+ GTIEE++YQRQ+SK+GL + + T
Sbjct: 767 NPANDIQAMARVWRDGQKKTVHIYRLLTAGTIEERIYQRQVSKQGLSGTVVDMGKGAEHT 826
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAE 719
S+ +LRDLF+ + H+ ++C C DGAE
Sbjct: 827 S---FSSSELRDLFSL-TETPCLTHDLLNCG-CSM--DGAE 860
>gi|255718981|ref|XP_002555771.1| KLTH0G17028p [Lachancea thermotolerans]
gi|238937155|emb|CAR25334.1| KLTH0G17028p [Lachancea thermotolerans CBS 6340]
Length = 1000
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/552 (45%), Positives = 328/552 (59%), Gaps = 62/552 (11%)
Query: 199 VSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
VS + G +GCI+AD+MGLGKTLQ IAL++TLL QG GKP + K IIV P+SLV+NW
Sbjct: 422 VSEIAQNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKPTIDKCIIVCPSSLVNNW 481
Query: 259 EAEIKKWVGGRVQLIAL--------------CESTRDDVVSGIDSFTDPCSSLQVLIVSY 304
EI KW+G R L +L ++ R ++ S P VLI+SY
Sbjct: 482 ANEIVKWLG-RGTLASLPIDGKKSSLSNGTVAQAVRSWALAQGRSVVKP-----VLIISY 535
Query: 305 ETFRMHSSKFSCSESCD--LLICDEAHRLKN--DQTLTN-----------------RNDL 343
ET R + CD LL+ DE HRLKN QT T+ +NDL
Sbjct: 536 ETLRRNVEHL---RHCDVGLLLADEGHRLKNADSQTFTSLNSIRCPRRVILSGTPIQNDL 592
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E+FA++NF+NPG+LG FR+ +E I+ GR+ A +E+ K G ER LS V++FI
Sbjct: 593 SEYFALLNFSNPGLLGSRLEFRKNFELPILRGRDADAMDEDVKKGDERLQALSTIVSKFI 652
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
+RRTN +LS +LP K V+ L P Q LY H + S+++K + ++ K ++ L +I
Sbjct: 653 IRRTNDILSKYLPCKYEHVIFVNLKPFQRSLYEHMLKSRDIKLLV-KDAKHTQPLKHIGV 711
Query: 464 LKKLCNHPKLIY--DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
LKKLCNHP L+ D I+ G ED + PE + + S G SGK
Sbjct: 712 LKKLCNHPDLLRLPDDIE-------GSEDLM----PEDYQSSTVSKRGRSELQTWHSGKF 760
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L R L ++ +DD+IV++SNYTQTLDL ++CR YP +RLDGT +I+KRQKLV+
Sbjct: 761 SILGRFLHKIKTESDDKIVIISNYTQTLDLIEKMCRSSTYPVVRLDGTMTINKRQKLVDR 820
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
FNDP EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FI
Sbjct: 821 FNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFI 880
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YRF+ TG+IEEK+YQRQ K L + E+ D S +L+ LF D +
Sbjct: 881 YRFICTGSIEEKIYQRQSMKMSLSSCVVDEKEDVE----RLFSAGNLKQLFELRPDTNCD 936
Query: 702 IHENMHCTRCQN 713
HE HC RC+N
Sbjct: 937 THETYHCKRCKN 948
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL 203
VP+ +DPLLV+ LRPHQ EGV+F++ CV+GL+
Sbjct: 324 VPVVIDPLLVKILRPHQVEGVKFLYRCVTGLV 355
>gi|355557962|gb|EHH14742.1| hypothetical protein EGK_00712 [Macaca mulatta]
Length = 705
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/549 (44%), Positives = 327/549 (59%), Gaps = 65/549 (11%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
H GV+F++ECV+ G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA
Sbjct: 139 HWYFGVKFLWECVTSR-RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKA 197
Query: 247 IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVS 303
++V+P+SLV NW E+ KW+GGR+Q +A+ ++D++ ++ F + + +LI+S
Sbjct: 198 MVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIIS 257
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLE 344
YETFR+H S L+ICDE HRLKN + T + NDL
Sbjct: 258 YETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLL 316
Query: 345 EFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFIL 404
E+F++V+F N GILG A F++++E I+ GR+ A+E ++KLG ER EL++ VN
Sbjct: 317 EYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGEERLRELTSIVN---- 372
Query: 405 RRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITAL 464
+LTPLQ+ELY F+ + E L+ IT+L
Sbjct: 373 ---------------------RLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSL 411
Query: 465 KKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVL 524
KKLCNHP LI+D G G D FPP S +LSGKM VL
Sbjct: 412 KKLCNHPALIHDKCVEEEDGFVGALD---LFPPGYSS---------KALEPQLSGKMLVL 459
Query: 525 ARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND 584
+L R + D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN
Sbjct: 460 DYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNS 519
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR
Sbjct: 520 PSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRL 579
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
LS GTIEEK++QRQ K+ L + E+ D S +L++LF + S+ H+
Sbjct: 580 LSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELKELFILDEASLSDTHD 635
Query: 705 NMHCTRCQN 713
+HC RC N
Sbjct: 636 RLHCRRCVN 644
>gi|302504353|ref|XP_003014135.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371]
gi|291177703|gb|EFE33495.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371]
Length = 790
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 258/587 (43%), Positives = 335/587 (57%), Gaps = 97/587 (16%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+ LQ I L++T
Sbjct: 213 VPVVIDPRLAKILRPHQIEGVK-----------------------------LQCITLMWT 243
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+KA+I P +LV NW E+ KW+G G+ L R
Sbjct: 244 LLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLR 303
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET RM+S + ++ LL+CDE HRLKN + T
Sbjct: 304 QWAIASGRSVVRP-----VLIVSYETLRMNSDELRDTQ-IGLLLCDEGHRLKNADSQTYV 357
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NPGILG + F + YE I+ GR+ T
Sbjct: 358 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 417
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G ER +EL VN+FI+RR+N LLS +LP K VV C L P Q +LYNHFI S
Sbjct: 418 DEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQS 477
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF- 500
+K + K S+ L I LKKLCNHP L+ + PG C ++FP +M
Sbjct: 478 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--KLSEDLPG------CEQYFPEDMTV 527
Query: 501 -SGRSG-----SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
+GR G +W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +
Sbjct: 528 SNGRRGDREVKTW---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFER 578
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
LCR R Y +RLDGT + KR KLV+ FNDP+ EFVFLLSSKAGGCG+NL+G NRLVLF
Sbjct: 579 LCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLF 638
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNPA D+QA ARVWRDGQ K F+YRF++TGTIEEK++QRQ K+ L + D
Sbjct: 639 DPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VD 694
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
S+ S + LR+LF F S+ H+ C RC+ DG + I
Sbjct: 695 SAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCR--PDGTQHI 739
>gi|320168818|gb|EFW45717.1| Rad54b protein [Capsaspora owczarzaki ATCC 30864]
Length = 988
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/654 (39%), Positives = 369/654 (56%), Gaps = 68/654 (10%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPM 242
LRPHQR+GV+F++ECV+G+ AG G ILAD+MGLGKTLQ + LL+TLL QG + G +
Sbjct: 319 LRPHQRDGVRFLYECVTGMRTDAGF-GAILADEMGLGKTLQCVTLLWTLLKQGPYMGTAL 377
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLI 301
VK+A++V P+SLV NW+ E KKW+G R+Q A+ R D + + V+I
Sbjct: 378 VKRALVVCPSSLVKNWQREFKKWLGDHRLQTFAVSAENRPDAFL-------LQTVIPVMI 430
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKND--------QTLTNR-----------ND 342
VSYE R S D++ CDE HRLKN+ +L+ R ND
Sbjct: 431 VSYEMLRQEIDVIS-KVPFDIVFCDEGHRLKNESAKISQALMSLSTRRRIILTGTPIQND 489
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L+EFF+++ F NPGI+G A F+R YE I+ R+P AT++EK LG +R+S+L + F
Sbjct: 490 LQEFFSLLEFCNPGIVGTATTFKRIYENPIVASRQPEATQDEKLLGQQRASQLQQLTSLF 549
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
LRRT+ + +LPPKI VV C+ +PLQ +Y + S ++ ++ S+ L IT
Sbjct: 550 CLRRTSDVNRQYLPPKIEYVVFCEPSPLQLAIYRKVLQSAPLRSCFDSSSRASQHLVAIT 609
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP----PEMFSGRSGSWTGGDGAWVELS 518
+LKK+CN P LI++ K+ + F + I FP P+ F W L
Sbjct: 610 SLKKICNSPALIHELAKNAEKDSL-FANTIDLFPDDFSPDTFDAAHSGKQRIFWMWA-LR 667
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
KM LA++L +++ T DR+V+VSNYTQTLD +LC + + RLDG+T +KRQ +
Sbjct: 668 CKMAALAQILCTIKRDTTDRVVIVSNYTQTLDHLEKLCAAYEFSFARLDGSTPTAKRQPI 727
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN ++VFLLSSKAGG GLNL+G RL+L D DWNPAND QA ARVWRDGQ +
Sbjct: 728 VEAFNSKYSTDYVFLLSSKAGGVGLNLVGACRLILVDTDWNPANDLQAMARVWRDGQTRT 787
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV 698
V +YR L TG+I+EK+YQRQ+SK+GL + + ++SA S ++LRDLF+ +D
Sbjct: 788 VHLYRMLLTGSIDEKIYQRQLSKQGLSVAVSSNEGEASAVS---FSQDELRDLFSLREDT 844
Query: 699 RSEIHENMHCT----RCQNYDDGAESIG----EGDETNSANKNDQSDQEVTDIGGFAGLA 750
+ H+ M C+ R + +E++G + Q + D G
Sbjct: 845 LCDTHDLMSCSCETGRAAREVNDSENVGGNALKKTGLGRGGAAAALKQRLIDTG------ 898
Query: 751 GCLHKLKSSEKQLGTPLEEDLNNWGH----HFYSMSVPDAILQASAGDEVTFVF 800
KLK+S + +L +W H HF + + + +++FVF
Sbjct: 899 ----KLKAS-------VSSELQSWAHVDRLHFEQLPSDAGLNDVTLDGKLSFVF 941
>gi|88319960|ref|NP_001034645.1| DNA repair and recombination protein RAD54B isoform 1 [Mus
musculus]
gi|51316246|sp|Q6PFE3.1|RA54B_MOUSE RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|34785459|gb|AAH57604.1| RIKEN cDNA E130016E03 gene [Mus musculus]
Length = 886
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/602 (41%), Positives = 359/602 (59%), Gaps = 41/602 (6%)
Query: 150 PPGVDPLVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P + LV+ +P+E N +V + +DP LV LRPHQ++G+ F++ECV G+
Sbjct: 235 PCTPNALVMPRPDENHQRMFNRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGM-R 293
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
A G G ILAD+MGLGKTLQ I+L++TL CQG + GKP++KK +IVTP SLV+NW E +
Sbjct: 294 AVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQ 353
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
KW+G R+++ + D ++ F + + VLI+SYE + + L
Sbjct: 354 KWLGSERIKIFTV------DQDHKVEEFINS-TFHSVLIISYEMLLRSLDQIK-TIPFGL 405
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
LICDE HRLKN T +NDL+EFFA+V+F NPGILG +
Sbjct: 406 LICDEGHRLKNSSIKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSS 465
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
+R+ YE II REP++++EE++LG R++EL+ +FILRRT +++ +LPPKI VV
Sbjct: 466 YRKIYEEPIIISREPSSSKEERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVV 525
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C+ LQ ELY + S++V+ + + S L I ALKKLCNHP L++ ++K
Sbjct: 526 FCRPGALQIELYRKLLRSQSVRFCLQGLLENSAHLICIGALKKLCNHPCLLFSSVKGKEF 585
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLV 542
++ E+ R + S + + E SGK+ VL +LL + + R ++++LV
Sbjct: 586 SSSCEENEERNLCQGLLSVFPAGYNPLQFSEEE-SGKLQVLVKLLAVIHELRPTEKVILV 644
Query: 543 SNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCG 602
SNY QTL++ ++C+ Y RLDG T +S+RQ +V+ FN +F+FLLSSKAGG G
Sbjct: 645 SNYRQTLNVLEEVCKRHGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVG 704
Query: 603 LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKE 662
LNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+
Sbjct: 705 LNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQ 764
Query: 663 GLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIG 722
GL + S Q S E+L++LFT H+ H+ + C C E
Sbjct: 765 GLSGAVVDLTRSSEHIQ---FSVEELKNLFTLHESSHCVTHDLLDC-ECTGEKGHTEDAS 820
Query: 723 EG 724
EG
Sbjct: 821 EG 822
>gi|148673695|gb|EDL05642.1| mCG142038, isoform CRA_b [Mus musculus]
Length = 886
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/602 (41%), Positives = 358/602 (59%), Gaps = 41/602 (6%)
Query: 150 PPGVDPLVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P + LV+ +P+E N +V + +DP LV LRPHQ++G+ F++ECV G+
Sbjct: 235 PCTPNALVMPRPDENHQRMFNRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGM-R 293
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
A G G ILAD+MGLGKTLQ I+L++TL CQG + GKP++KK +IVTP SLV NW E +
Sbjct: 294 AVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVDNWRKEFQ 353
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
KW+G R+++ + D ++ F + + VLI+SYE + + L
Sbjct: 354 KWLGSERIKIFTV------DQDHKVEEFINS-TFHSVLIISYEMLLRSLDQIK-TIPFGL 405
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
LICDE HRLKN T +NDL+EFFA+V+F NPGILG +
Sbjct: 406 LICDEGHRLKNSSIKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSS 465
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
+R+ YE II REP++++EE++LG R++EL+ +FILRRT +++ +LPPKI VV
Sbjct: 466 YRKIYEEPIIISREPSSSKEERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVV 525
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C+ LQ ELY + S++V+ + + S L I ALKKLCNHP L++ ++K
Sbjct: 526 FCRPGALQIELYRKLLRSQSVRFCLQGLLENSAHLICIGALKKLCNHPCLLFSSVKGKEF 585
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLV 542
++ E+ R + S + + E SGK+ VL +LL + + R ++++LV
Sbjct: 586 SSSCEENEERNLCQGLLSVFPAGYNPLQFSEEE-SGKLQVLVKLLAVIHELRPTEKVILV 644
Query: 543 SNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCG 602
SNY QTL++ ++C+ Y RLDG T +S+RQ +V+ FN +F+FLLSSKAGG G
Sbjct: 645 SNYRQTLNVLEEVCKRHGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVG 704
Query: 603 LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKE 662
LNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+
Sbjct: 705 LNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQ 764
Query: 663 GLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIG 722
GL + S Q S E+L++LFT H+ H+ + C C E
Sbjct: 765 GLSGAVVDLTRSSEHIQ---FSVEELKNLFTLHESSHCVTHDLLDC-ECTGEKGHTEDAS 820
Query: 723 EG 724
EG
Sbjct: 821 EG 822
>gi|151943650|gb|EDN61960.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 898
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 343/604 (56%), Gaps = 83/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 204 -----NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFR 308
E+ KW+G + + + G + + + VLI+SYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 309 MHSSKFSCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFF 347
+ + ++C+ L++ DE HRLKN +LT +NDL E+F
Sbjct: 439 RNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYF 495
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS V++FI+RRT
Sbjct: 496 ALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTVVSKFIIRRT 555
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
N +L+ +LP K V+ L PLQ+ELYN I S+ VK+ + S+ L I LKKL
Sbjct: 556 NDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKV-VKGVGGSQPLRAIGILKKL 614
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CNHP L+ + + D + + S K +L R
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNM-----------PGSKARDVQTKYSAKFSILERF 663
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT SI+KRQKLV+ FNDP
Sbjct: 664 LHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEG 723
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+ST
Sbjct: 724 QEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 783
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK++QRQ K L + D+ S+++LR LF +++ E HE H
Sbjct: 784 GTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNENTICETHETYH 839
Query: 708 CTRC 711
C RC
Sbjct: 840 CKRC 843
>gi|365765783|gb|EHN07289.1| Rad54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 343/604 (56%), Gaps = 83/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 204 -----NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW
Sbjct: 319 QKTAQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFR 308
E+ KW+G + + + G + + + VLI+SYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 309 MHSSKFSCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFF 347
+ + ++C+ L++ DE HRLKN +LT +NDL E+F
Sbjct: 439 RNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYF 495
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS V++FI+RRT
Sbjct: 496 ALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRT 555
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
N +L+ +LP K V+ L PLQ+ELYN I S+ VK+ + S+ L I LKKL
Sbjct: 556 NDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKV-VKGVGGSQPLRAIGILKKL 614
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CNHP L+ + + D + + S K +L R
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNM-----------PGSKARDVQTKYSAKFSILERF 663
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT SI+KRQKLV+ FNDP
Sbjct: 664 LHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEG 723
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+ST
Sbjct: 724 QEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 783
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK++QRQ K L + D+ S+++LR LF +++ E HE H
Sbjct: 784 GTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNENTICETHETYH 839
Query: 708 CTRC 711
C RC
Sbjct: 840 CKRC 843
>gi|190407107|gb|EDV10374.1| DNA repair and recombination protein RAD54 [Saccharomyces
cerevisiae RM11-1a]
Length = 898
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 343/604 (56%), Gaps = 83/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 204 -----NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFR 308
E+ KW+G + + + G + + + VLI+SYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 309 MHSSKFSCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFF 347
+ + ++C+ L++ DE HRLKN +LT +NDL E+F
Sbjct: 439 RNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYF 495
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS V++FI+RRT
Sbjct: 496 ALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRT 555
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
N +L+ +LP K V+ L PLQ+ELYN I S+ VK+ + S+ L I LKKL
Sbjct: 556 NDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKV-VKGVGGSQPLRAIGILKKL 614
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CNHP L+ + + D + + S K +L R
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNM-----------PGSKARDVQTKYSAKFSILERF 663
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT SI+KRQKLV+ FNDP
Sbjct: 664 LHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEG 723
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+ST
Sbjct: 724 QEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 783
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK++QRQ K L + D+ S+++LR LF +++ E HE H
Sbjct: 784 GTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNENTICETHETYH 839
Query: 708 CTRC 711
C RC
Sbjct: 840 CKRC 843
>gi|6321275|ref|NP_011352.1| DNA-dependent ATPase RAD54 [Saccharomyces cerevisiae S288c]
gi|417577|sp|P32863.1|RAD54_YEAST RecName: Full=DNA repair and recombination protein RAD54
gi|172343|gb|AAA34949.1| recombination and repair protein [Saccharomyces cerevisiae]
gi|728692|emb|CAA88534.1| RAD54 [Saccharomyces cerevisiae]
gi|1322760|emb|CAA96875.1| RAD54 [Saccharomyces cerevisiae]
gi|285812049|tpg|DAA07949.1| TPA: DNA-dependent ATPase RAD54 [Saccharomyces cerevisiae S288c]
gi|392299585|gb|EIW10679.1| Rad54p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 898
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 343/604 (56%), Gaps = 83/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 204 -----NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFR 308
E+ KW+G + + + G + + + VLI+SYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 309 MHSSKFSCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFF 347
+ + ++C+ L++ DE HRLKN +LT +NDL E+F
Sbjct: 439 RNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYF 495
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS V++FI+RRT
Sbjct: 496 ALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRT 555
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
N +L+ +LP K V+ L PLQ+ELYN I S+ VK+ + S+ L I LKKL
Sbjct: 556 NDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKV-VKGVGGSQPLRAIGILKKL 614
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CNHP L+ + + D + + S K +L R
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNM-----------PGSKARDVQTKYSAKFSILERF 663
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT SI+KRQKLV+ FNDP
Sbjct: 664 LHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEG 723
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+ST
Sbjct: 724 QEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 783
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK++QRQ K L + D+ S+++LR LF +++ E HE H
Sbjct: 784 GTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNENTICETHETYH 839
Query: 708 CTRC 711
C RC
Sbjct: 840 CKRC 843
>gi|256272233|gb|EEU07224.1| Rad54p [Saccharomyces cerevisiae JAY291]
gi|259146347|emb|CAY79604.1| Rad54p [Saccharomyces cerevisiae EC1118]
Length = 898
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 343/604 (56%), Gaps = 83/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 204 -----NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFR 308
E+ KW+G + + + G + + + VLI+SYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 309 MHSSKFSCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFF 347
+ + ++C+ L++ DE HRLKN +LT +NDL E+F
Sbjct: 439 RNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYF 495
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS V++FI+RRT
Sbjct: 496 ALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRT 555
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
N +L+ +LP K V+ L PLQ+ELYN I S+ VK+ + S+ L I LKKL
Sbjct: 556 NDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKV-VKGVGGSQPLRAIGILKKL 614
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CNHP L+ + + D + + S K +L R
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNM-----------PGSKARDVQTKYSAKFSILERF 663
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT SI+KRQKLV+ FNDP
Sbjct: 664 LHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEG 723
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+ST
Sbjct: 724 QEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 783
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK++QRQ K L + D+ S+++LR LF +++ E HE H
Sbjct: 784 GTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNENTICETHETYH 839
Query: 708 CTRC 711
C RC
Sbjct: 840 CKRC 843
>gi|410905419|ref|XP_003966189.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Takifugu
rubripes]
Length = 1164
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/541 (46%), Positives = 336/541 (62%), Gaps = 51/541 (9%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPM 242
LRPHQREG+ F++ECV G+ AAG G ILAD+MGLGKTLQS+AL +TLL QG + GKP+
Sbjct: 553 LRPHQREGLIFLYECVMGM-RAAGGSGAILADEMGLGKTLQSVALSWTLLKQGPYGGKPV 611
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDD--VVSGIDSFTDPCSSLQV 299
VK+ ++VTP SLV NW E KW+G R+Q+ + + R + V+S + S V
Sbjct: 612 VKRVLVVTPGSLVQNWGREFNKWLGRERIQVFTVDQDHRVEHFVLSPLHS---------V 662
Query: 300 LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------R 340
L++SYE + E L+ICDE HRLKN T+ +
Sbjct: 663 LVISYEMLLRCLDQVQKVE-FGLIICDEGHRLKNSSIKTSSALNSLSCSRRVILTGTPVQ 721
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
NDL+EF+A++ F NPGILG + +R+ YE I+ R+P+ TEEE+ LG ER++ELS
Sbjct: 722 NDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILHSRQPSCTEEERVLGEERAAELSRLTG 781
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY 460
FILRRT +++ +LPP++ + C +PLQ ELY H + + + + T+ LA
Sbjct: 782 MFILRRTQEIINRYLPPRLDWTLFCAPSPLQLELYKHLLCHRVFRSCLQAATQTHTHLAC 841
Query: 461 ITALKKLCNHPKLIYDTIK----SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
ITALKKLCNHP L+Y T++ +G+ + +E FP GS++ G+ +
Sbjct: 842 ITALKKLCNHPVLLYSTVQERTDNGSEEGSFYEGLAELFP--------GSYSSGELTTAD 893
Query: 517 LSGKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
SGK+ VL+ LLG +R+ + DR+V+VSNYT+TLDL LC Y + RLDG T +R
Sbjct: 894 -SGKLMVLSDLLGAIRRLSPSDRVVVVSNYTKTLDLLEDLCVAMGYTFCRLDGHTPTGQR 952
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
Q+LV+ FN F+FLLSSKAGG GLNL+G + LVL+D DWNPAND QA ARVWRDGQ
Sbjct: 953 QRLVDSFNSAYSQNFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQ 1012
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
KK V IYR L+ GTIEE+V+QRQ+SK+GL + A F ST +LRDLF+
Sbjct: 1013 KKTVHIYRLLTAGTIEERVFQRQVSKQGLSGTVV--DLGKGAEHATF-STNELRDLFSLT 1069
Query: 696 D 696
D
Sbjct: 1070 D 1070
>gi|349578068|dbj|GAA23234.1| K7_Rad54p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 898
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 343/604 (56%), Gaps = 83/604 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------- 203
VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 204 -----NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFR 308
E+ KW+G + + + G + + + VLI+SYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 309 MHSSKFSCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFF 347
+ + ++C+ L++ DE HRLKN +LT +NDL E+F
Sbjct: 439 RNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYF 495
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS V++FI+RRT
Sbjct: 496 ALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEIAKGEAQLQKLSTIVSKFIIRRT 555
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
N +L+ +LP K V+ L PLQ+ELYN I S+ VK+ + S+ L I LKKL
Sbjct: 556 NDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKV-VKGVGGSQPLRAIGILKKL 614
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CNHP L+ + + D + + S K +L R
Sbjct: 615 CNHPNLLNFEDEFDDEDDLDLPDDYNM-----------PGSKARDVQTKYSAKFSILERF 663
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT SI+KRQKLV+ FNDP
Sbjct: 664 LHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEG 723
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+ST
Sbjct: 724 QEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 783
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK++QRQ K L + D+ S+++LR LF +++ E HE H
Sbjct: 784 GTIEEKIFQRQSMKMSLSSCV----VDAKEDVERLFSSDNLRQLFQKNENTICETHETYH 839
Query: 708 CTRC 711
C RC
Sbjct: 840 CKRC 843
>gi|260802348|ref|XP_002596054.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
gi|229281308|gb|EEN52066.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
Length = 791
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 266/604 (44%), Positives = 351/604 (58%), Gaps = 69/604 (11%)
Query: 148 TLPPGVDP-----LVLWQPEEPQN-----DGGNLVPITVDPLLVRFLRPHQREGVQFMFE 197
T+ P DP LV+ +P G LV + VDP L R LRPHQR+G+ F++
Sbjct: 133 TVAPRFDPTAEGVLVMPRPSPAHQWKYNPAGQPLVDVVVDPHLSRHLRPHQRDGIIFLYL 192
Query: 198 CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVS 256
CV G+ + G+ G ILAD MGLGKTLQ I +++TLL QG + GKP++ + +IVTP SLV
Sbjct: 193 CVMGMRDHPGL-GAILADSMGLGKTLQCITMIWTLLKQGPYGGKPVLHRILIVTPGSLVK 251
Query: 257 NWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
NW E KKW+G R ++ A+ + +R +D F V+I+SYE +
Sbjct: 252 NWVKEFKKWLGNERCKVYAVGQDSR------VDEFAR-SPLYPVMIISYEMLVRYVRDIE 304
Query: 316 CSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPG 356
+ DL++CDE HRLKN T +NDL+E ++V+F NPG
Sbjct: 305 -KINFDLIVCDEGHRLKNTNIKTTSSISGLSARRRIVLTGTPIQNDLQELHSIVDFCNPG 363
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+LG FR+ YE I+ +P ATE EK LG R+ ELS QF LRRT + + +LP
Sbjct: 364 VLGPITAFRKVYEEPIVRSHQPGATEAEKTLGATRAEELSRLTGQFTLRRTEDVNNKYLP 423
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI--SEETKQSKILAYITALKKLCNHPKLI 474
PK+ VV C+ TPLQ ++Y + S+ +K + + T S L I+ALKKLCN P LI
Sbjct: 424 PKVEAVVFCRPTPLQLDIYRKLLCSRVLKSFLYSNRPTDGSLHLMCISALKKLCNDPCLI 483
Query: 475 YDTIKSGNPGTTGFE--------DCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
Y K G GF+ D + FP + S S E SGK+ VLA
Sbjct: 484 YTAAKEGEDELFGFDQGEESIYKDVLSLFP-RGYDPNSSS--------PEYSGKLQVLAD 534
Query: 527 LLGHL-RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP 585
LLG L + +RIV+VSNYTQTLD+ + RY YLRLDG+T KRQ++V FND
Sbjct: 535 LLGSLYSEGPRERIVVVSNYTQTLDMV-----QVRYGYLRLDGSTPTGKRQQIVERFNDK 589
Query: 586 SKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFL 645
+FVFLLS+KAGG GLNLIG +RLVL+D DWNPAND QA ARVWRDGQ + V IYR +
Sbjct: 590 YCRDFVFLLSTKAGGVGLNLIGASRLVLYDIDWNPANDLQAMARVWRDGQPRVVHIYRLI 649
Query: 646 STGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHEN 705
+TGTIEEK+YQRQ+SK+GL + D+ ++ S EDL+DLFT H+D S H+
Sbjct: 650 TTGTIEEKIYQRQISKQGLSGAV----VDAKSSSKVQFSAEDLKDLFTLHEDTDSVTHDL 705
Query: 706 MHCT 709
+ C
Sbjct: 706 LDCA 709
>gi|302691444|ref|XP_003035401.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8]
gi|300109097|gb|EFJ00499.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8]
Length = 842
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/622 (42%), Positives = 360/622 (57%), Gaps = 57/622 (9%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C SG++ +GCI+AD+MGLGKTLQ I LL+T
Sbjct: 216 VPVVIDPRLGKVLRPHQVEGVKFLYRCASGMV-MENTYGCIMADEMGLGKTLQCITLLWT 274
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC---ESTRDDVVSGI 287
LL Q GKP ++K II P+SLV NW E+ KW+G + L + T+ +++ +
Sbjct: 275 LLKQSPHAGKPTIEKCIIACPSSLVRNWANELTKWLGKEDTISPLAVDGKGTKAELIEKV 334
Query: 288 DSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
+ + + V+IVSYET R + + LL+ DE HRLKN + T +
Sbjct: 335 NRWVSASGRNVTQPVMIVSYETLR-SLTDYLAQCPIGLLLADEGHRLKNSENQTYQALAS 393
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
NDL E+++++NF NP LG FR+ YE II GR+ AT+++K
Sbjct: 394 LNVRRRVILTGTPIQNDLSEYYSLLNFCNPNFLGSKNDFRKNYENIIIRGRDADATDKDK 453
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ ++ EL+ V +FI+RRTN LLS +LP K +VV C L+ Q LY FI S +K
Sbjct: 454 QESEKKLRELTGIVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSEFQLALYRLFITSPEIK 513
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLI---YDTIKSGNPGTTGF-----------EDC 491
+ Q L I LKKLCNHP+L+ D S + GF
Sbjct: 514 SLLRGTNSQP--LKAINILKKLCNHPELLDLPNDLQGSDHLIPEGFCGAGQQQGGSGRSG 571
Query: 492 IRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
R +G SGS +G + SGK VL R L +R T D+IVL+SNYTQTLDL
Sbjct: 572 GRSGRGGGGAGGSGSGSGSGQVRCDWSGKFVVLERFLQRMRTTTTDKIVLISNYTQTLDL 631
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNR 610
F ++ R +RY Y RLDGT + +KRQK+V+ FNDP+ E FVFLLSSKAGGCG+NLIG NR
Sbjct: 632 FEKMLRGKRYGYFRLDGTMTTTKRQKMVDEFNDPNNTEKFVFLLSSKAGGCGINLIGANR 691
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+LFDPDWNPA D+QA ARVWRDGQKK F+YRF+STGTIEEK++QRQ +K+ L +
Sbjct: 692 LILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSSVVD 751
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG--AESIGEGDE-- 726
E+ D S + LR LF F+++ + H+ C RC+N A+++ GD
Sbjct: 752 EKEDVE----RHFSIDSLRQLFKFNENTLCDTHDTFKCKRCKNGVQAMKAQALLYGDAST 807
Query: 727 ----TNSANKNDQSDQEVTDIG 744
TN+ K + D ++G
Sbjct: 808 WNHFTNAELKKNHDDLLRAEVG 829
>gi|189230031|ref|NP_001121509.1| RAD54 homolog B [Xenopus (Silurana) tropicalis]
gi|183986491|gb|AAI66345.1| rad54b protein [Xenopus (Silurana) tropicalis]
Length = 897
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 276/689 (40%), Positives = 382/689 (55%), Gaps = 97/689 (14%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP L LRPHQ+EG+ F++ECV G+ G ILAD+MGLGKTLQ I+
Sbjct: 265 GLPIVDVVVDPYLAVHLRPHQKEGILFLYECVMGM-RVNERFGAILADEMGLGKTLQCIS 323
Query: 228 LLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVS 285
L++TL+ QG + GKP++KKA+IVTP SLV NW E +KW+G R+++ A+ D
Sbjct: 324 LIWTLIRQGPYGGKPVIKKALIVTPGSLVKNWRKEFQKWLGTERIRVFAV------DQDH 377
Query: 286 GIDSFT-DPCSSLQVLIVSYETFRMHSSKFSCSESC-----DLLICDEAHRLKNDQTLTN 339
++ F P S VLI+SYE C E D++ICDE HRLKN T
Sbjct: 378 KVEEFMKSPLYS--VLIISYEML------LRCLEQIQSLDFDVVICDEGHRLKNTSIKTT 429
Query: 340 -------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+NDL+EFFA++ F NP LG + +R+ +E II REPTA
Sbjct: 430 SALASLTCSKRIILSGTPVQNDLQEFFALIEFVNPAALGSLSTYRKIFEEPIIRSREPTA 489
Query: 381 TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
T EEK LG ER++EL+ FILRRT +++ LPPKI +V C+ + Q +LY ++
Sbjct: 490 TTEEKNLGEERAAELARLTGLFILRRTQEVINKFLPPKIESIVFCRPSQFQLDLYRKLLN 549
Query: 441 SKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI--KSGNPGT---TGFEDCIRFF 495
S+ VK + + S L I ALKKLCNHP L++ TI KS NP +E F
Sbjct: 550 SRTVKSCLLGSGESSPHLVCIGALKKLCNHPFLLFRTIQGKSTNPDQDEHNLYESVAEVF 609
Query: 496 PPEMFSGRSGSWTGGDGAWVELS--GKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLF 552
P + DGA + S GK+ VL+ LL +R+ + +R+VLVSNYTQTL++
Sbjct: 610 PQDY-----------DGAKISESESGKLLVLSNLLSRIRELSPSERVVLVSNYTQTLNIL 658
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
LC + Y RLDG T +++RQ +V+ FN +F+FLLSSKAGG GLNLIG + L+
Sbjct: 659 QDLCNQHGYSCTRLDGQTPVTQRQHIVDGFNSKYSTDFIFLLSSKAGGVGLNLIGASHLI 718
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPAND QA ARVWRDGQ+ V IYR L+TG++EEK+YQRQ+SK+GL +
Sbjct: 719 LYDLDWNPANDIQAMARVWRDGQRHTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLT 778
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANK 732
S + S ++LR+LFT H+D H+ + C D T +
Sbjct: 779 KKSEHIR---FSLDELRNLFTLHEDTDCVTHDLLQC----------------DCTITNCH 819
Query: 733 NDQSDQEVTDIGGFAGLAGCLHK---LKSSEKQLGTPLE-EDLNNWGHHFYSMSVPDAIL 788
+D S Q+ +H+ L + QL +L W H + D L
Sbjct: 820 SDGSPQK-----------PLIHRSCQLGLHQDQLNKNFSMSELMQWKHFSGQQNTEDPFL 868
Query: 789 QASAGDEVTFVFTNQVDGKLVPIESKVSP 817
Q + ++FVF N + ++ P S++SP
Sbjct: 869 QM-GKEHISFVFQNTTNSQVNPT-SELSP 895
>gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi]
gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi]
Length = 873
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 260/616 (42%), Positives = 351/616 (56%), Gaps = 53/616 (8%)
Query: 140 NNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECV 199
NN + P G L PE+ +N G L + +D L LRPHQ EGV+FM+EC
Sbjct: 207 NNTEVQVIKAPEGAYILNENHPEKDKN-GKKLSDVFIDNFLGENLRPHQVEGVKFMYECA 265
Query: 200 SGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWE 259
GL + G GC+LAD+MGLGKTLQ+I L+YTLL +G G P++KKAI+VT +SLV NW
Sbjct: 266 MGLKDFVG-KGCLLADEMGLGKTLQTITLIYTLLRRGPFGSPIIKKAIVVTNSSLVKNWT 324
Query: 260 AEIKKWVG-GRVQLIALCESTRDDVVS-GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCS 317
+E KWVG +++++ + T S + F QVLI+SY + +
Sbjct: 325 SEFDKWVGEDKIKVLTVTTKTAKQSPSETLKIFK--AGYHQVLIISYNLCTNYVEELQDC 382
Query: 318 ESCDLLICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGIL 358
+ CD+LICDE H+LKN QTL +NDL EFF + +F NPG+L
Sbjct: 383 Q-CDILICDEGHKLKNANIKIFQTLKKISTPRRIVLSGTPLQNDLNEFFTICDFINPGLL 441
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPK 418
GDA F+ + I +EP A +++K +G RS EL+ V+QF+LRRTN LL HLPPK
Sbjct: 442 GDATSFKNLFTEPIKKSQEPNAKKQDKVIGENRSKELNKIVSQFVLRRTNLLLRQHLPPK 501
Query: 419 IIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI 478
+ V+ C +T LQ LY HF+ SK ++ I+ + LA I LKKL HP +IY
Sbjct: 502 MEIVLFCGMTELQENLYKHFVLSKALRGVINGTLDSNNALACIMHLKKLLAHPNMIYPQE 561
Query: 479 KSGNPGTTG---FEDCI----RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL 531
+ F+D + FP + + + SGK+ VL LL +
Sbjct: 562 NNEEKEEEDNELFDDIWTQSKKHFPSDYNPNDKKEYHS------QYSGKLLVLDNLLREI 615
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV 591
R+ DR+V+VSN+ L+ +LC+ R YP RLDG+T KR +VN FN P N+F+
Sbjct: 616 RE-VGDRVVIVSNFKSILNEIEKLCKIRDYPLSRLDGSTQSEKRMVIVNSFNSPKSNDFI 674
Query: 592 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIE 651
FLLSSKAGGCGLNLIG NRL++ DPDWNP+ND+QA ARVWRDGQKK VFIYR + GTIE
Sbjct: 675 FLLSSKAGGCGLNLIGANRLIMIDPDWNPSNDEQAMARVWRDGQKKSVFIYRMIGCGTIE 734
Query: 652 EKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
EK++QRQ+ K GL K E++ S S+E L++LF + +D M C
Sbjct: 735 EKIFQRQIVKTGLSKSTLDEKSLKSQ-----FSSEMLKELFKYDND--------MDCKTY 781
Query: 712 QNYDDGAESIGEGDET 727
+ ++I E DE
Sbjct: 782 PADSNDLDAIKEKDEV 797
>gi|348526954|ref|XP_003450984.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oreochromis niloticus]
Length = 1210
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 265/592 (44%), Positives = 352/592 (59%), Gaps = 68/592 (11%)
Query: 144 EENFTLPPGVDPLV---LWQPEEPQN-------DGGNLVPITVDPLLVRFLRPHQREGVQ 193
EE T P DPL L P N G +V + +DP L LRPHQR+G+
Sbjct: 557 EEEQTRRPRHDPLAPGALVMPRPSANHQWLNNKSGLPVVDVVLDPHLTTHLRPHQRDGLL 616
Query: 194 FMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPT 252
F++ECV G+ AAG +G ILAD+MGLGKTLQS+AL +TLL QG + G+P+ K+ ++VTP
Sbjct: 617 FLYECVMGM-RAAGCYGAILADEMGLGKTLQSVALSWTLLKQGPYGGRPVAKRVLVVTPG 675
Query: 253 SLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFT-DPCSSLQVLIVSYETFRMH 310
SLV NW AE KW+G R+ + + + R I+ F P S VL++SYE
Sbjct: 676 SLVQNWAAEFNKWLGRERISVFTVDQDHR------IEQFVLSPLHS--VLVISYEML--- 724
Query: 311 SSKFSCSESCD-----LLICDEAHRLKNDQTLTN-------------------RNDLEEF 346
C E L+ICDE HRLKN T+ +NDL+EF
Sbjct: 725 ---LRCLEQVQKVDFGLIICDEGHRLKNSNIKTSSALSSLECNRRVILTGTPVQNDLQEF 781
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
+A++ F N GILG + +R+ YE I+ R+P+ TEEE+ LG ER++ELS FILRR
Sbjct: 782 YAIIEFVNSGILGSSTAYRKVYEEPILRSRQPSCTEEERVLGEERAAELSRLTGMFILRR 841
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T +++ +LPP++ + C+ + LQ ELY H + + + + T+ LA ITALKK
Sbjct: 842 TQEIINRYLPPRLDWTLFCEPSSLQRELYKHLLCHRVFRACLQGSTQTHTHLACITALKK 901
Query: 467 LCNHPKLIYDTIKSGNPGTTG---FEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
LCNHP L++ T+K + G+ +E FP E +S SG +T D SGK+ V
Sbjct: 902 LCNHPGLLHITVKRTDAGSVESSLYEGLADLFP-ESYS--SGGFTIAD------SGKLLV 952
Query: 524 LARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
L+ LL +RQ + DR+V+VSNYTQTLDL LC Y + RLDG T ++RQ+LV+ F
Sbjct: 953 LSDLLAAIRQLSSSDRVVVVSNYTQTLDLLQDLCVHMGYTFCRLDGNTPTNQRQRLVDSF 1012
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N P F+FLLSSKAGG GLNLIG + LVL+D DWNPAND QA ARVWRDGQKK V IY
Sbjct: 1013 NSPYSQNFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIY 1072
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
R L+ GTIEE+++QRQ+SK+GL + + T ST DLRDLF+
Sbjct: 1073 RLLTAGTIEERIFQRQVSKQGLSGTVVDMGKGAEHTS---FSTSDLRDLFSL 1121
>gi|358340990|dbj|GAA48772.1| DNA repair and recombination protein RAD54 and RAD54-like protein,
partial [Clonorchis sinensis]
Length = 614
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/510 (46%), Positives = 319/510 (62%), Gaps = 45/510 (8%)
Query: 235 QGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC 294
QG + KP + KA++VTP+SLV NW E KW+ G+V + + +++++ + + +F
Sbjct: 60 QGPEAKPTIDKAVVVTPSSLVKNWYNEFYKWLQGKVHPLTIDSGSKEEIDTKLATFLAQS 119
Query: 295 SS---LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----------- 340
VLI+SYETFR+HSS E L++CDE HRLKN + T +
Sbjct: 120 GRRIPTPVLIISYETFRLHSSALHKGE-VGLVLCDEGHRLKNSENQTYQALVQLNCSRRV 178
Query: 341 --------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
NDL E+F++V+F N G+LG AA FRR +ET I+ GR+ ATE+++K G E+
Sbjct: 179 LLSGTPIQNDLLEYFSLVHFVNMGLLGTAADFRRRFETPILRGRDADATEDDQKKGEEKL 238
Query: 393 SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI--HSKNVKRAISE 450
EL VN+ I+RRT ALL+ +LP KI +VVCC LTP+Q +Y F+ ++ V +S
Sbjct: 239 QELLVIVNRCIIRRTQALLTKYLPVKIEQVVCCSLTPVQRMVYADFVARKAREVAARLSM 298
Query: 451 ETKQSKIL-----AYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
++ + L A IT LKKLCNHP L+YD + + + GF D + FP + G
Sbjct: 299 DSGRGPALSVSSLASITHLKKLCNHPDLVYDKMATN---SDGFVDALAHFPRDY----RG 351
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
S +LSGK VL LL +R T D++VL+SNYTQTLDLF +LC R Y Y+R
Sbjct: 352 SLESNAPFRPDLSGKFQVLDYLLALIRTTTSDKVVLISNYTQTLDLFERLCSMRGYIYVR 411
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDGT +I KR K+V FNDP+ EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+Q
Sbjct: 412 LDGTMTIKKRAKIVERFNDPTSQEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQ 471
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI--QQEQTDSSATQGNFL 683
A ARVWRDGQKK +IYR +STGTIEEK+ QRQ K+ L + QQE+ + + G
Sbjct: 472 AMARVWRDGQKKECYIYRLISTGTIEEKMLQRQAHKKALSSCVVDQQEEVERHFSLG--- 528
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
DL++LFTFH D S+ H+ C RC N
Sbjct: 529 ---DLKELFTFHVDTVSDTHDRFKCRRCVN 555
>gi|409045739|gb|EKM55219.1| hypothetical protein PHACADRAFT_173301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 799
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/577 (42%), Positives = 334/577 (57%), Gaps = 66/577 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGVQFMF+ +G++ +GCI+AD+MGLGKTLQ + L++T
Sbjct: 202 VPVVIDPRLGKVLRPHQIEGVQFMFKATTGMI-VEHQYGCIMADEMGLGKTLQCLTLMWT 260
Query: 232 LLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
LL Q G+ ++ II P SLV NW EI KW+G V L + T D++
Sbjct: 261 LLKQSPHAGRSTAERVIIACPASLVKNWGNEIVKWLGPGVVGTVLLDGT-DNLGKARRWI 319
Query: 291 TDP----CSSLQVLIVSYETFRMHSSKFS--CSESCDLLICDEAHRLKNDQTLT------ 338
P C++ VLI SYE R + C LL+CDE HRLKN ++ T
Sbjct: 320 EQPRGRNCTN-PVLITSYEYLRTLGESYPSICEMEIGLLLCDEGHRLKNTESKTWQVLST 378
Query: 339 -------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+NDL E+F++++F P LG FR+ +E +II GR+ A++ +
Sbjct: 379 LKAKRRVILTGTPIQNDLTEYFSLLSFALPTYLGTRNEFRKNFENAIIRGRDADASDAVR 438
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ ++ +L+A V++FI+RRTN LLS +LP K VV C ++ +Q ++Y HF+ K
Sbjct: 439 EKSEQKLKDLAALVSKFIIRRTNDLLSKYLPVKYEHVVFCHMSDIQRDMYCHFVDHPQTK 498
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
+ K++K L I LKKL NHP+L+ P +
Sbjct: 499 TEL--RGKEAKPLVAINILKKLVNHPELL----------------------PIGKETKHA 534
Query: 506 SWTGGDGAWVEL---------SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
W A E+ SGK VL R L +RQ T+D+IVL+SNYT TLD+F +L
Sbjct: 535 EWDNKKDAEKEMEMRDVHTEWSGKFLVLERFLDKMRQETNDKIVLISNYTSTLDVFEKLL 594
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R +RY Y RLDG ++ KRQ++V+ FN+P EFVFLLSSKAGGCG+NLIG NRL+LFDP
Sbjct: 595 RAKRYGYFRLDGKMNVKKRQEVVDKFNNPEVPEFVFLLSSKAGGCGINLIGANRLILFDP 654
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA+D+QA ARVWRDGQKK F+YRF+ TGTIEEKV+QRQ K+ L + E+ D
Sbjct: 655 DWNPASDQQALARVWRDGQKKECFVYRFICTGTIEEKVFQRQAQKQSLSSAVVDEKEDVE 714
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
F S ++LR LF ++D E HE C RC+N
Sbjct: 715 ----RFFSRDNLRQLFKYNDKTLCETHETFKCKRCKN 747
>gi|354482677|ref|XP_003503524.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B-like [Cricetulus griseus]
Length = 950
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/576 (43%), Positives = 344/576 (59%), Gaps = 68/576 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + VDP LVR LR Q+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 324 LVDVVVDPHLVRHLRSFQKEGIIFLYECVMGM-RENGRCGAILADEMGLGKTLQCISLIW 382
Query: 231 TLLCQ-GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQ GKP++K+ +IVTP SLV+NW E +KW+G R++ + D ++
Sbjct: 383 TLQCQDXXGGKPVIKRTLIVTPGSLVNNWRKEFQKWLGSERIKTFTV------DQDHKVE 436
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F + VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 437 EFIKS-TFYSVLIISYEMLLRSLDQIKTIKF------DLLICDEGHRLKNSSIKTTAALF 489
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+V+F NPGILG +R+ YE II REP++++EE
Sbjct: 490 SLPCEKRVILTGTPVQNDLQEFFALVDFVNPGILGSLPSYRKIYEEPIIMSREPSSSKEE 549
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R+ ELS +FILRRT +++ +LPPKI VV C+ LQ+ELY + S++V
Sbjct: 550 KELGERRAVELSCLTGRFILRRTQEVINKYLPPKIENVVFCQPVALQTELYRKLLSSQSV 609
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG-------NPGTTGFEDCIRFFP- 496
+ + + S L I ALKKLCNHP L++ ++KS N + + +P
Sbjct: 610 RFCLQGLLENSTHLICIGALKKLCNHPCLLFSSVKSKEFSSSDENEEMNLCKGLLTLYPT 669
Query: 497 ---PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLF 552
P FS SGK+ VL +LL + + R +++VLVSNY QTL++
Sbjct: 670 GYDPLQFSENE-------------SGKLQVLVKLLAAIHELRPTEKVVLVSNYRQTLNIL 716
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
+C+ Y RLDG T +S+RQ++V++FN +F+FLLSSKAGG GLNLIGG+ L+
Sbjct: 717 EGICKRHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLI 776
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 777 LYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLT 836
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L+DLFT H++ + H+ + C
Sbjct: 837 KSSEHIQ---FSVEELKDLFTLHENSQCVTHDLLDC 869
>gi|397500919|ref|XP_003821150.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B [Pan paniscus]
Length = 910
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 352/577 (61%), Gaps = 69/577 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
LV + +DP LV LRPHQ+EG+ F++ECV G+ G G ILAD+MGLGKTLQ I+L++
Sbjct: 283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGM-RMNGSCGAILADEMGLGKTLQCISLIW 341
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGID 288
TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ + D ++
Sbjct: 342 TLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV------DQDHKVE 395
Query: 289 SFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
F VLI+SYE ++ + KF DLLICDE HRLKN T
Sbjct: 396 EFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKNSAIKTTTALI 448
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+++F NPGILG + +R+ YE II REP+A+EEE
Sbjct: 449 SLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE 508
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
K+LG R++EL+ FILRRT +++ +LPPKI VV C+ LQ ELY ++S+ V
Sbjct: 509 KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVV 568
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--------FEDCIRFFP 496
+ + + S L I ALKKLCNHP L++++IK +T ++ + FP
Sbjct: 569 RFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFP 628
Query: 497 ----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDL 551
P +F+ + SGK+ VL++LL + + R +++VLVSNYTQTL++
Sbjct: 629 ADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
++C+ Y Y RLDG T IS+RQ++V+ FN + F FLLSSKAGG GLNLIGG+ L
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFXFLLSSKAGGVGLNLIGGSHL 735
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+SK+GL +
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDL 795
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S Q S E+L++LFT H+ H+ + C
Sbjct: 796 TKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 829
>gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata]
Length = 942
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/571 (42%), Positives = 332/571 (58%), Gaps = 49/571 (8%)
Query: 204 NAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIK 263
N G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW E+
Sbjct: 368 NNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLISKCIIVCPSSLVNNWANELV 427
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFRMHSSK 313
KW+G + + + SG S + + VLI+SY+T R + +
Sbjct: 428 KWLGPNTLSPLAVDGKKSSLASGATSVAEAIKNWAQAQGRNIVKPVLIISYDTLRRNVKQ 487
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
+E LL+ DE HRLKN +LT +NDL E+FA++NF+N
Sbjct: 488 LQNTE-VGLLLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSN 546
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
PG+LG FRR +E I+ R+ AT+ + K G ++ LS V++FI+RRTN +LS +
Sbjct: 547 PGLLGTRNEFRRNFEIPILRSRDADATDNDVKSGEQKLQLLSNIVSKFIIRRTNDILSKY 606
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LP K V+ LTP Q ++YN I S+++K+ + + S+ L I LKKLCNHP LI
Sbjct: 607 LPCKYEHVIFVNLTPFQKQVYNMLIKSRDIKKVVKGDGG-SQPLKAIGVLKKLCNHPDLI 665
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR 534
+ N P+ +S +G + SGK +L R L ++
Sbjct: 666 KLDEELDNYNDLDI--------PDDYSIPTGK---SRDVQTQFSGKFAILERFLHKIKTE 714
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLL 594
+DD+IVL+SNYTQTLDL ++CR R Y +RLDGT SI+KRQKLV+ FNDP EF+FLL
Sbjct: 715 SDDKIVLISNYTQTLDLIERMCRNRHYASVRLDGTMSINKRQKLVDRFNDPEGQEFIFLL 774
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
SSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STGTIEEK+
Sbjct: 775 SSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKI 834
Query: 655 YQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNY 714
YQRQ K L + D+ S ++LR LF F+D + HE C RC +
Sbjct: 835 YQRQSMKMSLSSCV----VDAKEDVERLFSVDNLRQLFQFNDKTICDTHETFQCKRCNKH 890
Query: 715 DDG---AESIGEGDETNSANKNDQSDQEVTD 742
A ++ GD T + N ++ ++ D
Sbjct: 891 GQQIMRAAAMLYGDATTWNHLNHKALEKTND 921
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 135 PRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQF 194
P+ + N V + G P + P E VP+ +DP L + LRPHQ EGV+F
Sbjct: 213 PKILSNGVKNKTLQELLGNSP---FNPTESMKKKFANVPVVIDPKLAKILRPHQVEGVKF 269
Query: 195 MFECVSGLL 203
++ CV+GL+
Sbjct: 270 LYRCVTGLV 278
>gi|444316964|ref|XP_004179139.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
gi|387512179|emb|CCH59620.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
Length = 955
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/534 (44%), Positives = 321/534 (60%), Gaps = 45/534 (8%)
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +GCI+AD+MGLGKTLQ I L++TLL QG GK ++ K IIV P+SLV+NW E+ KW+
Sbjct: 383 GAYGCIMADEMGLGKTLQCITLMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWL 442
Query: 267 G----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC 316
G G+ + ST + + VLI+SYET R + +
Sbjct: 443 GPGTLSPLAIDGKKSSLMSSNSTVSEAIRAWGQAKGRNIVKPVLIISYETLRRNVDQLKN 502
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
+E L++ DE HRLKN +LT +NDL E+FA++NF+NPG+
Sbjct: 503 TE-VGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGL 561
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG FR+ YE I+ R+ AT++E G ++ ++LS V++FI+RRTN +LS +LP
Sbjct: 562 LGTRLEFRKNYEIPILRSRDADATDKEIAKGTQQLTQLSNIVSKFIIRRTNDILSKYLPC 621
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K V+ L P Q ELY F+ S+++K+ ++ S+ L I LKKLCNHP L+
Sbjct: 622 KYEHVIFVNLKPFQRELYKRFVKSRDIKKVVNG-VNGSQPLKAIGLLKKLCNHPNLLNLE 680
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
+ + T F+ P+ F+ S T E SGK +L R L ++ ++DD
Sbjct: 681 DELNSVMTDDFD------IPDDFNMNGNSRT----IQTEYSGKFSILERFLHQIKTKSDD 730
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+IVL+SNYTQTLDL ++CR + Y LRLDGT SI+KRQKLV+ FNDP EF+FLLSSK
Sbjct: 731 KIVLISNYTQTLDLIEKMCRNKHYGVLRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSK 790
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STGTIEEK++QR
Sbjct: 791 AGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQR 850
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
Q K L + D+ S ++LR LF +++ + HE HC RC
Sbjct: 851 QSMKMSLSSCV----VDAKEDVERLFSADNLRQLFQLNENTICDTHETYHCKRC 900
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL 203
+P+ +DP L LRPHQ EGV+F++ CV+GL+
Sbjct: 253 IPVVLDPKLANILRPHQVEGVRFLYRCVTGLV 284
>gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis]
Length = 895
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/624 (41%), Positives = 346/624 (55%), Gaps = 98/624 (15%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL---------------------------N 204
VP+ +DP L + LRPHQ EGV+F++ CV+GL+ N
Sbjct: 236 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADSN 295
Query: 205 AAGIHGCILAD--------------------------DMGLGKTLQSIALLYTLLCQGFD 238
G + D +MGLGKTLQ +AL++T+L QG
Sbjct: 296 ITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQ 355
Query: 239 GKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIA-------LCESTRDDVVSGIDSF 290
G+ + K IIV P+SLV+NW EI KW+G G + +A L D VS S
Sbjct: 356 GRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASA 415
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----------- 339
VLI+SY+T R + + E L++ DE HRLKN +LT
Sbjct: 416 QGRNIVKPVLIISYDTLRRNVEQLKNCE-VGLMLADEGHRLKNADSLTFTALDSIRCPRR 474
Query: 340 --------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
+NDL E+FA++NF+NPG+LG FR+ +E I+ R+ AT+EE LG +R
Sbjct: 475 VILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDR 534
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
+LS V++FI+RRTN +L+ +LP K V+ LTP Q LY HFI S+ VK+ + +
Sbjct: 535 LRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGD 594
Query: 452 TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGD 511
+ Q L I LKKLCNHP L+ + PG+ E+ I P+ + S T +
Sbjct: 595 SNQP--LKAIGLLKKLCNHPDLL--ELSEDIPGS---EELI----PDDYQSSVDSRTSRN 643
Query: 512 GAWVE--LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+ ++ S K VLAR L ++ ++D+IVL+SNYTQTLDL ++C Y LRLDGT
Sbjct: 644 RSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGT 703
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
+I+KRQKLV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA AR
Sbjct: 704 MNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALAR 763
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
VWRDGQKK FIYRF+STGTIEEK++QRQ K L + E+ D S+++L+
Sbjct: 764 VWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE----RLFSSDNLK 819
Query: 690 DLFTFHDDVRSEIHENMHCTRCQN 713
LF + HE +C RC+N
Sbjct: 820 QLFKLDTKTICDTHETYNCKRCKN 843
>gi|321476094|gb|EFX87055.1| RAD54B meiotic recombination protein [Daphnia pulex]
Length = 1001
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/561 (42%), Positives = 341/561 (60%), Gaps = 46/561 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP L + LRPHQREGV FM+EC+ G ++G ILAD+MGLGKTLQ I
Sbjct: 415 GTVIVDVVVDPTLSKNLRPHQREGVVFMYECLMGF-KTPNMYGAILADEMGLGKTLQCIT 473
Query: 228 LLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
L++ LL QG ++G+P++++ +IVTP+SLV NWE E ++W+G R ++ ++ +
Sbjct: 474 LIWILLQQGPYNGRPIIQRVLIVTPSSLVKNWEKEFRRWLG-RERITVFTADQQNRPIEF 532
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---------DQTL 337
+ P V++VSYE + + D+++CDE HRLKN Q
Sbjct: 533 LKHLVSP-----VMVVSYEMLVRCFDEIQ-QINFDMVVCDEGHRLKNAGNKTSSLLSQLD 586
Query: 338 TNR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
TNR NDL+EFF++ +F NPGILG + FRR YE I+ ++P E++++L
Sbjct: 587 TNRKVLLTGTPVQNDLKEFFSLADFVNPGILGSLSSFRRTYEEPIVALQQPECDEDQREL 646
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G +SELS +QF+LRRT +++ HLPPK+ V+ CK T +Q LY + + S V+
Sbjct: 647 GESCASELSHLTSQFVLRRTQEVMNAHLPPKVESVIFCKPTCVQVNLYRNVLDSSAVRSI 706
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
+S + L++I AL+KLCNHP L T K +C + E + S
Sbjct: 707 LSSTQTGNDQLSFILALRKLCNHPTLFAATRKHA--------ECSELWQ-ENYKEDSSQI 757
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
D SGK V +L L + T ++I+LVS T+ LDLF + C ER+Y ++RLD
Sbjct: 758 QSRDA-----SGKFVVTFAILDSLMKNTKEKIILVSYSTKMLDLFGESCTERKYSFVRLD 812
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G+T + R +V+ FNDP + VFLLSSKAGG GLNLIG +RL+L+D DWNPAND QA
Sbjct: 813 GSTPTNTRMGIVDRFNDPQGADRVFLLSSKAGGVGLNLIGASRLILYDIDWNPANDMQAM 872
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
AR+WR+GQK+ V IYR L+TGTIEEK++QRQ+ K+GL I + +TQG+F + E+
Sbjct: 873 ARIWREGQKRTVQIYRLLTTGTIEEKIFQRQILKQGLSGAIVDAR---DSTQGHF-TREE 928
Query: 688 LRDLFTFHDDVRSEIHENMHC 708
L+DLFT +D + H+ + C
Sbjct: 929 LKDLFTLREDTDCDTHDLISC 949
>gi|390338769|ref|XP_785657.3| PREDICTED: DNA repair and recombination protein RAD54B-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 274/716 (38%), Positives = 383/716 (53%), Gaps = 98/716 (13%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN--LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P D LV+ +P + QN+ N +V + VDP LV LRPHQ++GV F++EC+ GL
Sbjct: 89 PTHQDALVMPRPPSSHQWQNNQRNDSIVDVVVDPHLVSKLRPHQQKGVIFLYECIMGLRQ 148
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
G G ILAD+MGLGKTLQ I L++TL QG + GKP++K+ +IVTP SLV NW E +
Sbjct: 149 YEGC-GAILADEMGLGKTLQCITLVWTLFKQGPYGGKPIIKRVLIVTPGSLVKNWCREFR 207
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
KW+G R+ + + + ++ F V+++SYE ++ + DL
Sbjct: 208 KWLGSERISVFPVSSDKK------VEEFKK-SPLFPVMVISYEMMVRYADDIR-GITFDL 259
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
++CDE HRLKN T +NDL+EF+++V F NPG+LG +
Sbjct: 260 VVCDEGHRLKNSTIKTASLLSSLAVRRRILLTGTPIQNDLQEFYSIVEFCNPGVLGTSGS 319
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F R YE I+ +P+AT+EEK LG R++ELS + F+LRRT + + +LPPK+ VV
Sbjct: 320 FHRVYEEPILRSNQPSATKEEKTLGAARATELSRLTSLFVLRRTQEINNKYLPPKVETVV 379
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----ETKQSKILAYITALKKLCNHPKLIYDTI 478
CK + LQ LY H + S ++ +S + S L I ALKKLCN P L+Y
Sbjct: 380 FCKPSALQLRLYQHLLRSPLIRSCLSRGYASSASAGSPHLVCIGALKKLCNDPSLLYQAS 439
Query: 479 KSGNPG-----------------TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
+ + + ++ + +PP+ GR + GK+
Sbjct: 440 RKADEEGKRRGGESWLLDHDDEEESLYKGLLPIYPPDYSEGR---------PLLAHCGKL 490
Query: 522 HVLARLL--GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
VL+ +L H +R+VLVSNYTQTLD+ LC Y + RLDG+T +KRQ +V
Sbjct: 491 CVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSIEGYQFCRLDGSTPTAKRQSIV 550
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
HFN E +FLLSSKAGG GLNLIG +RL+L+D DWNPAND QA ARVWRDGQKK V
Sbjct: 551 EHFNSSYAKETIFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKKTV 610
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
IYR ++ GTIEEK+YQRQ+SK+ L + + S + + S EDLRDLFT H
Sbjct: 611 HIYRLITAGTIEEKIYQRQISKQSLSGAVVDAKGQSGSVK---FSLEDLRDLFTLHKGSS 667
Query: 700 SEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSS 759
H+ + C D ++ G +A + Q +G KLK +
Sbjct: 668 CITHDMLSC-------DCTDTNGPSSNVKAAGDVQKGPQRPCQLG----------KLKRA 710
Query: 760 --EKQLGTPLEEDLNNWGHHFYSMS--VPDAILQASAGDEVTFVFTNQVDGKLVPI 811
+K L DLN W H+ + D L A D +TFVF N+ + +VP+
Sbjct: 711 VLKKNLSM---GDLNEWQHYLAPLPEDFQDEYL-LEAKDGITFVFQNETN--MVPV 760
>gi|440300865|gb|ELP93312.1| lymphoid-specific helicase, putative [Entamoeba invadens IP1]
Length = 918
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/621 (40%), Positives = 348/621 (56%), Gaps = 92/621 (14%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P +VL+ EP V I VDP+L LRPHQ+ GV+FMF+CV GL +
Sbjct: 237 PRAPGAVVLY---EPSATSRGEVAIVVDPILGLKLRPHQKAGVKFMFDCVMGLKTGFRGN 293
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG- 268
GCILAD MGLGKT+Q+++L++TLL QG +G+P KK ++V P+SLV NWE E KKW+G
Sbjct: 294 GCILADGMGLGKTIQAVSLMFTLLKQGINGEPTCKKVMVVAPSSLVGNWENEFKKWLGDK 353
Query: 269 --RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
RV IA D +S ++ +VL++SY+ R+H K + +++CD
Sbjct: 354 APRVVAIASSGKKADQAMSDMEY-----GYAEVLVISYDQLRIHIDKIELIKDWGMIVCD 408
Query: 327 EAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLKN ++ +N+L EF+AMV+F NP +L + + FRR
Sbjct: 409 EGHRLKNADIKSSQAVSRVPTRRRVILSGTPIQNELGEFYAMVSFVNPNVLSEISTFRRI 468
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+E I+ R+ T E+KK G ERS EL+ FILRRT+ + +LPPK+ VV C L
Sbjct: 469 FEEPILISRQADCTPEQKKTGNERSKELTRLTKLFILRRTSKVNQKYLPPKVQHVVFCAL 528
Query: 428 TPLQSELYNHFIHSKNV-------KRAIS------------------------------- 449
TPLQ +Y I N KRA+
Sbjct: 529 TPLQKMIYQRLIDYYNTTRDEAKKKRALQPKEKKPKREKSTTPDLSEEKKGKAKRGRKKG 588
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E + S +TALKK+ NHP LI D +K+ FP + SG
Sbjct: 589 ETVEGSCQFQILTALKKVSNHPWLIQDFVKT--------------FPEVL----SGILPK 630
Query: 510 GDGAW-VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
G+ + + LSGK LA LL +LR R ++IV+VSNYT+TL+ A C++ YP+++LDG
Sbjct: 631 GEALYDMNLSGKTAFLAELLEYLR-RHKEKIVIVSNYTETLNFIAHYCKKCGYPFIQLDG 689
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
+ KR ++V FNDPS +EF+FLLSSKAGGCGLNLIGG LV+FDPDWNPAND+QA
Sbjct: 690 SVPAQKRTQMVTRFNDPSLDEFIFLLSSKAGGCGLNLIGGANLVMFDPDWNPANDEQAMG 749
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
RVWRDGQKK+ IYR LS+GT+EEK+YQRQ+ K L+ + + + F ++L
Sbjct: 750 RVWRDGQKKKCHIYRTLSSGTVEEKMYQRQIKK--LELAGKVVEGGEENEESTF-DDKEL 806
Query: 689 RDLFTFHDDVRSEIHENMHCT 709
++L F D + E H+ + CT
Sbjct: 807 KELCQFKDTI-CETHDLLGCT 826
>gi|401884850|gb|EJT48988.1| DNA recombination and repair protein Rad54B [Trichosporon asahii
var. asahii CBS 2479]
Length = 794
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/566 (44%), Positives = 342/566 (60%), Gaps = 66/566 (11%)
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
+DP L + LRPHQ EGV+ G AD GKTLQ IALL+TLL Q
Sbjct: 215 IDPRLSKVLRPHQIEGVKVSL-------------GGKSAD----GKTLQCIALLWTLLKQ 257
Query: 236 G-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQ-LIALCESTRDDVVSGIDSFTD 292
GK +K +I PTSLV NW E+ KW+G G V L+ + + +++ + +
Sbjct: 258 SPVPGKGTCEKVVIACPTSLVGNWANELIKWLGPGAVNPLVVDGKGGKAELIPAVRRWAA 317
Query: 293 PCS---SLQVLIVSYETFRMHSSKFSCSESC--DLLICDEAHRLKNDQTLTNR------- 340
+L V+IVSYET R ++ + C LL+ DE HRLKN TLT +
Sbjct: 318 ASGRSVTLPVMIVSYETLRTLKTEL---DGCPIGLLLADEGHRLKNADTLTFQALTALNV 374
Query: 341 ------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
NDL E+FA++NF NP LG A F++ +E I+ GR+ AT++EK+
Sbjct: 375 QRRVILTGTPIQNDLSEYFALLNFANPEYLGSRAEFKKNFELKILRGRDADATDKEKEES 434
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
+ EL V++FI+RRTN LLS +LP K VV C +PLQS LYNHF++SK+V+R +
Sbjct: 435 DAKLKELGGLVSRFIIRRTNDLLSKYLPVKYEHVVFCNPSPLQSSLYNHFVNSKDVQRLL 494
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
K S+ L I L+KLCNHP+L+ + PG+ +F P + GR T
Sbjct: 495 --RGKDSQPLKAIGLLRKLCNHPELL--NLPDDLPGSA------QFLPDDYAVGR----T 540
Query: 509 GGDGAW-VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
G D ++ +LSGK VL R+L H++ T D+IVL+SN TQTLDL +LCR ++Y +RLD
Sbjct: 541 GRDRSFNCQLSGKFVVLERMLDHIKNHTTDKIVLISNATQTLDLMERLCRVKKYGCVRLD 600
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
GT S++KR K+V+ FNDP EFVFLLSSKAGGCG+NLIG NRL+LFDPDWNPA+D+QA
Sbjct: 601 GTMSVNKRSKIVDRFNDPEGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQAL 660
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
ARVWRDGQKK F+YRF++TG+IEEK++QRQ K+ L + E D++ + +D
Sbjct: 661 ARVWRDGQKKECFVYRFMTTGSIEEKIFQRQCQKQNLSACVVDEAEDTA----RHFTQDD 716
Query: 688 LRDLFTFHDDVRSEIHENMHCTRCQN 713
LR LF FH + + H+ C RC++
Sbjct: 717 LRQLFKFHTNTLCDSHDTYKCKRCRD 742
>gi|224046507|ref|XP_002200063.1| PREDICTED: DNA repair and recombination protein RAD54B [Taeniopygia
guttata]
Length = 919
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/556 (43%), Positives = 340/556 (61%), Gaps = 53/556 (9%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPM 242
LRPHQ+EG+ F++ECV G+ +G G ILAD+MGLGKTLQ IAL++TLL QG + KP+
Sbjct: 302 LRPHQKEGIIFLYECVMGM-RVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPV 360
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSF-TDPCSSLQVL 300
+K+A++VTP SLV NW+ E +KW+G R+++ A+ D ++ F + P S V+
Sbjct: 361 LKRALVVTPGSLVKNWKKEFQKWLGNERIKVFAV------DQDHKVEEFISSPLYS--VM 412
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RN 341
I+SYE S + E +LLICDE HRLKN T +N
Sbjct: 413 IISYEMLLRSSDQIEAVEF-NLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQN 471
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DL+EF+A++ F NPGILG + +R+ YE I+ REP+ATEEEK+LG +R++EL+
Sbjct: 472 DLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGEKRAAELTRLTGL 531
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRT +++ LPPK ++ C+ T LQ ELY + S+ + + + S L I
Sbjct: 532 FILRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLGSRVITSCLQGRLENSPHLICI 591
Query: 462 TALKKLCNHPKLIYDTIK--SGNP------GTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
ALKKLCNHP L++ IK S +P ++ +E I FP + S ++ D
Sbjct: 592 GALKKLCNHPCLLFKAIKEKSCDPMSEEYDESSLYEGVIDVFPQDY---TSDTFCETD-- 646
Query: 514 WVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
SGK+ VL +LL + + + +R+VLVSNYTQTL++ +C+ Y Y RLDG T +
Sbjct: 647 ----SGKLQVLVKLLAAIHELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGHTPV 702
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
S+RQ +V+ FN F+FLLSSKAGG GLNL+G + L+L+D DWNPA D QA ARVWR
Sbjct: 703 SQRQHIVDTFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWR 762
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
DGQK V IYR L+TG+IEEK+YQRQ+SK+ L + S T S E+L++LF
Sbjct: 763 DGQKHSVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHTH---FSIEELKNLF 819
Query: 693 TFHDDVRSEIHENMHC 708
T H+D H+ + C
Sbjct: 820 TLHEDSSCVTHDLLEC 835
>gi|345327482|ref|XP_001506039.2| PREDICTED: hypothetical protein LOC100074424 [Ornithorhynchus
anatinus]
Length = 1623
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/642 (41%), Positives = 381/642 (59%), Gaps = 65/642 (10%)
Query: 139 ENNVIEENFTLPPGVDP-----LVLWQPEEPQN-----DGGNLVPITVDPLLVRFLRPHQ 188
+ N+++++ + P DP V+ +P + G LV + VDP LV LRPHQ
Sbjct: 850 KQNILKDSQMVKPRHDPNAPNAFVMPRPAKNHQWMFNRSGLPLVDVVVDPYLVNHLRPHQ 909
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAI 247
+EG+ F+FECV G+ G G ILAD+MGLGKTLQ I+L++TLL QG + GKP++K+ +
Sbjct: 910 KEGILFLFECVMGM-RVNGRFGAILADEMGLGKTLQCISLIWTLLRQGPYGGKPIIKQTL 968
Query: 248 IVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFT-DPCSSLQVLIVSYE 305
+VTP SLV+NW+ E +KW+G R+++ ++ D ++ F P S VLI+SYE
Sbjct: 969 VVTPGSLVNNWKKEFQKWLGTERIKVFSV------DQEHKVEEFIKSPFYS--VLIISYE 1020
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEF 346
+ S + +LLICDE HRLKN+ T +NDL+EF
Sbjct: 1021 ML-LRSLDQIKNIDFNLLICDEGHRLKNNSIKTTTALISLSCDRRIILTGTPVQNDLQEF 1079
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
+A++ F NPGILG + +R+ YE II REP+AT EEK+LG +R++EL+ FILRR
Sbjct: 1080 YALIEFVNPGILGSLSTYRKIYEEPIIRSREPSATREEKELGEKRAAELTRLTGLFILRR 1139
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T +++ +LPPKI VV C+ LQ ELY ++S+ + + + S L I ALKK
Sbjct: 1140 TQEVINKYLPPKIESVVFCRPAALQIELYRKLLNSRAISFCLQGMLENSPHLVCIGALKK 1199
Query: 467 LCNHPKLIYDTIKSGNPGTT--GFEDC------IRFFPPEMFSGRSGSWTGGDGAWVEL- 517
LCNHP L++ IK +T GFE+ I FPP+ + E+
Sbjct: 1200 LCNHPCLLFKAIKEKECNSTHDGFEETNLYEGLIDVFPPDY----------SPVTFPEVD 1249
Query: 518 SGKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
SGK+ VL +LL +R+ + +++VLVSNYTQTL + ++C+ Y + RLDG T IS+RQ
Sbjct: 1250 SGKLRVLIKLLAVIRELSPSEKVVLVSNYTQTLTILQEICKRYGYAHTRLDGQTPISQRQ 1309
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
+++ FN +FVFLLSSKAGG GLNL+GG+ L+L+D DWNPA D QA ARVWRDGQK
Sbjct: 1310 HIIDGFNSKHSPDFVFLLSSKAGGVGLNLVGGSHLILYDIDWNPATDIQAMARVWRDGQK 1369
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ V IYR L+TGTIEEK+YQRQ+SK+ L + + A++ S E+L+++FT H+
Sbjct: 1370 RPVHIYRLLTTGTIEEKIYQRQISKQSLSGTVVDL---TKASEHIHFSVEELKNVFTLHE 1426
Query: 697 DVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQ 738
D H+ + C + A+S+G+ S S Q
Sbjct: 1427 DSNCVTHDLLDCDCVEREVRQADSLGKVSTYRSCQLGPHSQQ 1468
>gi|406694411|gb|EKC97738.1| DNA recombination and repair protein Rad54B [Trichosporon asahii
var. asahii CBS 8904]
Length = 833
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/593 (43%), Positives = 347/593 (58%), Gaps = 81/593 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGL---------------- 219
+DP L + LRPHQ EGV+ VS A + CI A L
Sbjct: 215 IDPRLSKVLRPHQIEGVK-----VSLGGKALTVSSCIDARRAWLRTMLGVASWPTRWVLV 269
Query: 220 -----------GKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
GKTLQ IALL+TLL Q GK +K +I PTSLV NW E+ KW+G
Sbjct: 270 SGQWQVTADVTGKTLQCIALLWTLLKQSPVPGKGTCEKVVIACPTSLVGNWANELIKWLG 329
Query: 268 -GRVQ-LIALCESTRDDVVSGIDSFTDPCS---SLQVLIVSYETFRMHSSKFSCSESC-- 320
G V L+ + + +++ + + +L V+IVSYET R ++ + C
Sbjct: 330 PGAVNPLVVDGKGGKAELIPAVRRWAAASGRSVTLPVMIVSYETLRTLKTEL---DGCPI 386
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
LL+ DE HRLKN TLT + NDL E+FA++NF NP LG
Sbjct: 387 GLLLADEGHRLKNADTLTFQALTALNVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSR 446
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
A F++ +E I+ GR+ AT++EK+ + EL V++FI+RRTN LLS +LP K
Sbjct: 447 AEFKKNFELKILRGRDADATDKEKEESDAKLKELGGLVSRFIIRRTNDLLSKYLPVKYEH 506
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
VV C +PLQS LYNHF++SK+V+R + K S+ L I L+KLCNHP+L+ +
Sbjct: 507 VVFCNPSPLQSSLYNHFVNSKDVQRLL--RGKDSQPLKAIGLLRKLCNHPELL--NLPDD 562
Query: 482 NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW-VELSGKMHVLARLLGHLRQRTDDRIV 540
PG+ +F P + GR TG D ++ +LSGK VL R+L H++ T D+IV
Sbjct: 563 LPGSA------QFLPEDYAVGR----TGRDRSFNCQLSGKFVVLERMLDHIKNHTTDKIV 612
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
L+SN TQTLDL +LCR ++Y +RLDGT S++KR K+V+ FNDP EFVFLLSSKAGG
Sbjct: 613 LISNATQTLDLMERLCRVKKYGCVRLDGTMSVNKRSKIVDRFNDPEGKEFVFLLSSKAGG 672
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
CG+NLIG NRL+LFDPDWNPA+D+QA ARVWRDGQKK F+YRF++TG+IEEK++QRQ
Sbjct: 673 CGINLIGANRLILFDPDWNPASDQQALARVWRDGQKKECFVYRFMTTGSIEEKIFQRQCQ 732
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
K+ L + E D++ + +DLR LF FH + + H+ C RC++
Sbjct: 733 KQNLSACVVDEAEDTA----RHFTQDDLRQLFKFHTNTLCDSHDTYKCKRCRD 781
>gi|302307807|ref|NP_984563.2| AEL297Wp [Ashbya gossypii ATCC 10895]
gi|299789178|gb|AAS52387.2| AEL297Wp [Ashbya gossypii ATCC 10895]
Length = 895
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/551 (43%), Positives = 330/551 (59%), Gaps = 60/551 (10%)
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +GCI+AD+MGLGKTLQ IAL++TLL QG G+P ++K IIV P+SLV+NW EI KW+
Sbjct: 322 GAYGCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWL 381
Query: 267 G----------GRVQLIA---LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSK 313
G GR ++ + +S R ++ + P VLI+SYET R +
Sbjct: 382 GPDALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKP-----VLIISYETLRRNVEN 436
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
+ L++ DE HRLKN +LT +NDL E+FA++NF+N
Sbjct: 437 LKGCK-VGLMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLNFSN 495
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
PG+LG A FR+ +E I+ GR+ AT++E G + ELS V++FI+RRTN +LS +
Sbjct: 496 PGLLGTRAQFRKNFEIPILRGRDADATDKEIAAGEVKLHELSQIVSKFIIRRTNDILSKY 555
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LP K ++ L+P+Q +Y HF+ S+ V + + Q L I LKKLCNHP L+
Sbjct: 556 LPCKYEHILFVNLSPMQKAIYEHFVRSREVAKLMKGTGSQP--LKAIGLLKKLCNHPDLL 613
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL----SGKMHVLARLLGH 530
+ G+T P + S + + GG + VE+ S K +L R L
Sbjct: 614 --DLPDEIAGSTNL------IPDDYQSAMTHNSRGGR-SHVEVQTTHSSKFAILERFLFK 664
Query: 531 LRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF 590
++ ++D+IVL+SNYTQTLDL ++CR Y LRLDGT +I+KRQKLV+ FNDPS EF
Sbjct: 665 IKHESNDKIVLISNYTQTLDLIEKMCRYNHYGVLRLDGTMTINKRQKLVDKFNDPSGEEF 724
Query: 591 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 650
+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF++TG+I
Sbjct: 725 IFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFITTGSI 784
Query: 651 EEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
EEK+YQRQ K L + E+ D S+++LR LF F + + H HC R
Sbjct: 785 EEKIYQRQSMKMSLSSCVVDEKEDVE----RLFSSDNLRQLFQFDSNTICDTHATYHCKR 840
Query: 711 CQNYDDGAESI 721
C+ DG + I
Sbjct: 841 CR---DGKQMI 848
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
VP+ +DP L R LRPHQ EGV+F++ CV+GL
Sbjct: 221 VPVVIDPRLARILRPHQVEGVRFLYRCVTGL 251
>gi|195342153|ref|XP_002037666.1| GM18177 [Drosophila sechellia]
gi|194132516|gb|EDW54084.1| GM18177 [Drosophila sechellia]
Length = 717
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/500 (44%), Positives = 323/500 (64%), Gaps = 40/500 (8%)
Query: 235 QGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC 294
QG + KP + KAI+V+P+SLV NWE E KW+ GR+ + + T+++ + ++ F+
Sbjct: 138 QGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTS 197
Query: 295 SSL--QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------ 340
+ L VL++SYETFR+++ + C ++ICDE HRLKN LT +
Sbjct: 198 ARLGTPVLLISYETFRIYA-EILCQYQVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVL 256
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
NDL E++++VNF NP +LG AA F+R +E++I+ G+ +TE E++ IE++
Sbjct: 257 LSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEAERQRAIEKTQ 316
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
EL V+Q I+RRTN +L+ +LP K V+C KLT +Q ELY +F+ S V+R++++ +
Sbjct: 317 ELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNE 376
Query: 454 QSKI--LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGD 511
++ + LA IT LKK+C+HP LIY+ + + GFE+ P ++ D
Sbjct: 377 KASLTALADITTLKKICSHPDLIYEKLTARE---KGFENSQNVLP--------SNYKPKD 425
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
ELSGK +L +L +R +D++VL+SNYTQTLDLF QL R+R+Y ++RLDGT S
Sbjct: 426 LN-PELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 484
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
I KR K+V+ FNDP + F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA ARVW
Sbjct: 485 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVW 544
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
RDGQKK +IYR +++G+IEEK+ QRQ K+ L I D++ + + +DL+DL
Sbjct: 545 RDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTI----IDNNESAEKHFTRDDLKDL 600
Query: 692 FTFHDDVRSEIHENMHCTRC 711
FTF D+ S+ H+ + C RC
Sbjct: 601 FTFDADILSDTHDKLKCKRC 620
>gi|440793758|gb|ELR14933.1| DNA repair and recombination protein RAD54B, putative [Acanthamoeba
castellanii str. Neff]
Length = 689
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/559 (42%), Positives = 328/559 (58%), Gaps = 65/559 (11%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
D +VL+ P + G L + VDP + L+PHQREGV+F++EC GL GCIL
Sbjct: 128 DSVVLFNPTAASDPNGPLTAVVVDPYVGNILQPHQREGVKFLYECTMGLKGPG--RGCIL 185
Query: 214 ADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG---GRV 270
AD+MGLGKTLQ+I L++TLL QG +G P KKA+++TPTSL NW E+K+W+G
Sbjct: 186 ADEMGLGKTLQAITLIWTLLKQGPNGTPASKKALVITPTSLTKNWYHEVKRWLGLERLHA 245
Query: 271 QLIALCESTRDDVVSGIDSF-TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+I S +++ + +D F T P L LI+SYE FR+H++ DL+ICDE H
Sbjct: 246 LVIGQAASKKEETLKVLDEFKTSPHRPL--LIISYEQFRIHATFLQGVAGIDLVICDEGH 303
Query: 330 RLKN-DQTLTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN D +T +NDLEEFF MVNF NPG + D FR + T
Sbjct: 304 RLKNADARITKCINGLETRRRVIITGTPIQNDLEEFFTMVNFCNPGFM-DLKKFRDVFAT 362
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ GR+P AT ++K RS+ L + FI+RRT LL +LPP++ +VV C+L+ L
Sbjct: 363 PIVLGRDPNATPQQKLESQSRSTALMKRTESFIIRRTKDLLRQYLPPRVEQVVFCRLSSL 422
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY------DTIKSGNPG 484
Q++LY ++ S + L+ I +L+KLCNHP I+ +K
Sbjct: 423 QADLYRQYLRS-----------TMAAALSCIISLRKLCNHPCAIFPKPEVITLLKLQMVE 471
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
+ PE F+ + +ELSGKM L +LLG +R T DR+V+VSN
Sbjct: 472 AEPEMKKVAALFPEDFTATTHD--------IELSGKMEALDKLLGVIRTTTKDRVVIVSN 523
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLN 604
+ Q+LD+ LC++R Y ++RLDG+T +RQ +V+HFND + S +G G N
Sbjct: 524 FKQSLDVMQTLCKKRSYRFVRLDGSTPTGQRQNIVDHFNDQT--------SDYSGNVGFN 575
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
L+G NR+VLFDPDWNPAND QA RVWR GQKK+ +IYRF STGTIEEK++QRQ++KEGL
Sbjct: 576 LVGSNRIVLFDPDWNPANDAQAMGRVWRYGQKKKCWIYRFASTGTIEEKIFQRQVAKEGL 635
Query: 665 QKVIQQEQTDSSATQGNFL 683
I D+S G+ L
Sbjct: 636 SNAIM----DASRMAGDAL 650
>gi|363754225|ref|XP_003647328.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890965|gb|AET40511.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
Length = 915
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/560 (43%), Positives = 331/560 (59%), Gaps = 60/560 (10%)
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +GCI+AD+MGLGKTLQ I+LL+TLL QG G+P + K IIV P+SLV+NW EI KW+
Sbjct: 341 GAYGCIMADEMGLGKTLQCISLLWTLLRQGSQGRPTIDKCIIVCPSSLVNNWANEIVKWL 400
Query: 267 G----------GRVQLI---ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSK 313
G G+ + ++ +S + +S + P VLI+SYET R +
Sbjct: 401 GPNSLSPLAIDGKKSSLPNGSVSQSIKQWALSQGRNIVKP-----VLIISYETLRRNVDL 455
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
S+ L++ DE HRLKN ++LT +NDL E+FA+++F+N
Sbjct: 456 LKHSK-VGLMLADEGHRLKNGESLTFTSLDSINCSRRVILSGTPIQNDLSEYFALLSFSN 514
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
PG+LG + FR+ +E I+ GR+ AT++E + G + +LS V++FI+RRTN +LS +
Sbjct: 515 PGLLGTRSQFRKNFELPILRGRDADATDKEIEEGQLKLQQLSQIVSKFIIRRTNDILSKY 574
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LP K V+ L+P+Q +Y HF+ S++V + + Q L I LKKLCNHP L+
Sbjct: 575 LPCKYEHVIFVNLSPMQKSIYQHFVKSRDVAKLVKGTGSQP--LKAIGLLKKLCNHPDLL 632
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSG-----RSGSWTGGDGAWVELSGKMHVLARLLG 529
E C P + S RSG + G SGK +L R L
Sbjct: 633 QLP--------EDIEGCDHLIPEDYRSSMAQHNRSG-FRGHTAIQTCYSGKFSILERFLY 683
Query: 530 HLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE 589
+R ++D+IVL+SNYTQTLDL +CR Y LRLDGT SI+KRQKLV+ FN+P +E
Sbjct: 684 KIRTESNDKIVLISNYTQTLDLIEMMCRYNHYGVLRLDGTMSINKRQKLVDRFNNPDGDE 743
Query: 590 FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGT 649
F+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STGT
Sbjct: 744 FIFLLSSKAGGCGINLIGANRLILVDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGT 803
Query: 650 IEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
IEEK+YQRQ K L + E+ D S+++LR LF F + H +C
Sbjct: 804 IEEKIYQRQSMKMSLSSCVVDEKEDVE----RLFSSDNLRQLFQFDSVTACDTHTTFNCK 859
Query: 710 RCQNYDD--GAESIGEGDET 727
RC+N A+++ GD T
Sbjct: 860 RCKNGKQMVRAQAMLYGDAT 879
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
Query: 166 NDGGNL----VPITVDPLLVRFLRPHQREGVQFMFECVSGLL 203
N GGN VP+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 228 NTGGNKKFPSVPVVIDPKLAQVLRPHQVEGVRFLYRCVTGLV 269
>gi|374107777|gb|AEY96684.1| FAEL297Wp [Ashbya gossypii FDAG1]
Length = 895
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/551 (43%), Positives = 329/551 (59%), Gaps = 60/551 (10%)
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +GCI+AD+MGLGKTLQ IAL++TLL QG G+P ++K IIV P+SLV+NW EI KW+
Sbjct: 322 GAYGCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWL 381
Query: 267 G----------GRVQLIA---LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSK 313
G GR ++ + +S R ++ + P VLI+SYET R +
Sbjct: 382 GPDALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKP-----VLIISYETLRRNVEN 436
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
+ L++ DE HRLKN +LT +NDL E+FA++NF+N
Sbjct: 437 LKGCK-VGLMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLNFSN 495
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
PG+LG A FR+ +E I+ GR+ A ++E G + ELS V++FI+RRTN +LS +
Sbjct: 496 PGLLGTRAQFRKNFEIPILRGRDADANDKEIAAGEVKLHELSQIVSKFIIRRTNDILSKY 555
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LP K ++ L+P+Q +Y HF+ S+ V + + Q L I LKKLCNHP L+
Sbjct: 556 LPCKYEHILFVNLSPMQKAIYEHFVRSREVAKLMKGTGSQP--LKAIGLLKKLCNHPDLL 613
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL----SGKMHVLARLLGH 530
+ G+T P + S + + GG + VE+ S K +L R L
Sbjct: 614 --DLPDEIAGSTNL------IPDDYQSAMTHNSRGGR-SHVEVQTTHSSKFAILERFLFK 664
Query: 531 LRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF 590
++ ++D+IVL+SNYTQTLDL ++CR Y LRLDGT +I+KRQKLV+ FNDPS EF
Sbjct: 665 IKHESNDKIVLISNYTQTLDLIEKMCRYNHYGVLRLDGTMTINKRQKLVDKFNDPSGEEF 724
Query: 591 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 650
+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF++TG+I
Sbjct: 725 IFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFITTGSI 784
Query: 651 EEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
EEK+YQRQ K L + E+ D S+++LR LF F + + H HC R
Sbjct: 785 EEKIYQRQSMKMSLSSCVVDEKEDVE----RLFSSDNLRQLFQFDSNTICDTHATYHCKR 840
Query: 711 CQNYDDGAESI 721
C+ DG + I
Sbjct: 841 CR---DGKQMI 848
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
VP+ +DP L R LRPHQ EGV+F++ CV+GL
Sbjct: 221 VPVVIDPRLARILRPHQVEGVRFLYRCVTGL 251
>gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus]
gi|51316526|sp|Q9DG67.1|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus]
Length = 918
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/564 (43%), Positives = 343/564 (60%), Gaps = 55/564 (9%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG-KPM 242
LRPHQREG+ F++ECV G+ +G G ILAD+MGLGKTLQ I+L++TLL QG G KP+
Sbjct: 303 LRPHQREGIVFLYECVMGM-RVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPV 361
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSF-TDPCSSLQVL 300
+K+A+IVTP SLV NW+ E +KW+G R+++ + D ++ F + P S V+
Sbjct: 362 LKRALIVTPGSLVKNWKKEFQKWLGSERIKVFTV------DQDHKVEEFISSPLYS--VM 413
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-----TLTN--------------RN 341
I+SYE + E +LLICDE HRLKN LTN +N
Sbjct: 414 IISYEMLLRSLDQIQAIEF-NLLICDEGHRLKNSSIKTTTALTNLSCERRIILTGTPIQN 472
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DL+EF+A++ F NPG+LG + +R+ YE I+ REP+AT+EEK LG +R++EL+
Sbjct: 473 DLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGL 532
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRT +++ LPPK ++ C+ T LQ ELY + S+ + + + S L I
Sbjct: 533 FILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSSRVISSCLQGRLENSPHLICI 592
Query: 462 TALKKLCNHPKLIYDTIKSG--------NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
ALKKLCNHP L++ +K + ++ +E FP + +T +
Sbjct: 593 GALKKLCNHPCLLFKALKEKCCDPKSDEHVESSLYEGLTDVFPQD--------YTSDTFS 644
Query: 514 WVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
++ SGK+ VL +LL +R+ + +R+VLVSNYTQTL++ + C+ Y Y RLDG T +
Sbjct: 645 EID-SGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNVLLETCKCYGYSYTRLDGNTPV 703
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
S+RQ++V+ FN F+FLLSSKAGG GLNL+G + L+L+D DWNPA D QA ARVWR
Sbjct: 704 SQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWR 763
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF-LSTEDLRDL 691
DGQK V IYR L+TGTIEEK+YQRQ+SK+ L + D S T + S E+LR+L
Sbjct: 764 DGQKCTVHIYRLLTTGTIEEKIYQRQISKQDLSGAV----VDLSKTSEHIHFSVEELRNL 819
Query: 692 FTFHDDVRSEIHENMHCTRCQNYD 715
FT H++ H+ + C N D
Sbjct: 820 FTLHENSSCVTHDLLECDCMGNKD 843
>gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Meleagris gallopavo]
Length = 918
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/653 (39%), Positives = 370/653 (56%), Gaps = 80/653 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG-KPM 242
LRPHQREG+ F++ECV G+ +G G ILAD+MGLGKTLQ I+L++TLL QG G KP+
Sbjct: 303 LRPHQREGIVFLYECVMGM-RVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPV 361
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSF-TDPCSSLQVL 300
+K+A+IVTP SLV NW+ E +KW+G R+++ + D ++ F + P S V+
Sbjct: 362 LKRALIVTPGSLVKNWKKEFQKWLGSERIKVFTV------DQDHKVEEFISSPLYS--VM 413
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RN 341
I+SYE + E +LLICDE HRLKN T +N
Sbjct: 414 IISYEMLLRSLDQIQDIEF-NLLICDEGHRLKNSSIKTTTALTSLSCERRIILTGTPIQN 472
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DL+EF+A++ F NPG+LG + +R+ YE I+ REP+AT+EEK LG +R++EL+
Sbjct: 473 DLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGL 532
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
F+LRRT ++ LPPK ++ C+ T LQ ELY + S+ + + + S L I
Sbjct: 533 FVLRRTQEVIDKFLPPKKENIIFCQPTALQLELYRKLLSSRVITSCLQGRLENSPHLICI 592
Query: 462 TALKKLCNHPKLIYDTIK--SGNPGT------TGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
ALKKLCNHP L++ +K S +P + + +E FP + S ++ D
Sbjct: 593 GALKKLCNHPCLLFKAVKEKSCDPKSDEHVESSLYEGLTDVFPQDY---TSDIFSETD-- 647
Query: 514 WVELSGKMHVLARLLGHLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
SGK+ VL +LL +R+ + +R+VLVSNYTQTL++ + C+ Y Y RLDG T +
Sbjct: 648 ----SGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNILQETCKRYGYSYTRLDGNTPV 703
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
S+RQ++V+ FN F+FLLSSKAGG GLNL+G + L+L+D DWNPA D QA ARVWR
Sbjct: 704 SQRQQIVDSFNCKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWR 763
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF-LSTEDLRDL 691
DGQK V IYR L+TG+IEEK+YQRQ+SK+ L + D S T + S E+L++L
Sbjct: 764 DGQKHTVHIYRLLTTGSIEEKIYQRQISKQDLSGAV----VDLSKTSEHIHFSVEELKNL 819
Query: 692 FTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAG 751
FT H++ H+ + C + +G D NS++K +
Sbjct: 820 FTLHENSSCVTHDLLEC----------DCVGNKDHQNSSSKKPSVSR------------C 857
Query: 752 CLHKLKSSEKQLGTPLE-EDLNNWGHHF-YSMSVPDAILQASAGDEVTFVFTN 802
C + + + PL L W H +PD L+ + V+F+F N
Sbjct: 858 CQLRQDQGKHNIKKPLSMSQLMQWKHFSGQHQDLPDPFLE-RIKENVSFIFQN 909
>gi|66811390|ref|XP_639875.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|60466825|gb|EAL64871.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 989
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/606 (40%), Positives = 356/606 (58%), Gaps = 47/606 (7%)
Query: 150 PPGVDPLVLWQPEEPQND--GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG 207
P D L+ + P Q D G +V + +DP + R LRPHQR GV+F+++CV+G N G
Sbjct: 243 PNSKDALIFYSPPPSQLDEEGNKVVHVVLDPYIGRHLRPHQRRGVKFLYDCVTGNSNDNG 302
Query: 208 IHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
G ILAD MGLGKTLQ++ALL+TLL Q GKP +KKAIIVTP++LV+NW++EI+KW G
Sbjct: 303 YSGAILADQMGLGKTLQTLALLWTLLKQSPYGKPTIKKAIIVTPSTLVNNWKSEIQKWFG 362
Query: 268 -GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
GR+ L +S + + ++ F S VLI+SYE R+ S + + SC L++CD
Sbjct: 363 NGRLIASTLTDSLTKETKANLNDFN--TSIKPVLIISYEQCRIFSKELE-TMSCGLMVCD 419
Query: 327 EAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
EAHRLKN T +N+L EF++M++F NP LG A F++
Sbjct: 420 EAHRLKNSNAKTTQSIMSVRCDRKILLTGTPIQNNLVEFYSMMDFANPNCLGSLADFKKS 479
Query: 368 YETSIICGRE-PTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+ I RE P +T + GI +S +LS V FI+RR + +L +LPPK ++++ CK
Sbjct: 480 FIIPINKSRESPNSTSTSE--GIRKSIQLSKLVKPFIIRRKSNILEKYLPPKRVQIIFCK 537
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQ--SKILAYITALKKLCNHPKLIYDTIKSGNPG 484
L+ LQ ELY ++S +VK +S + + L+ IT LKKLCN P L+ K G
Sbjct: 538 LSSLQIELYKSILNSNSVKSLLSGGGSRGSATSLSTITLLKKLCNSPSLLLLNNKQDEGG 597
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
+ ++ ++ SGK+ + L+ L+ ++++VLVSN
Sbjct: 598 EQQQTEIQNILKKHNYTLE--NYQEIQEQQDNESGKLLFVESLIKQLKP-MNEKLVLVSN 654
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF----------VFLL 594
+T+TLD+F +LC+ LRLDG RQ LV+ FN ++N VFLL
Sbjct: 655 FTKTLDVFERLCKRLSIDTLRLDGDVKADSRQALVDKFNSSTQNVSSSKSSSSQYQVFLL 714
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
S+KAGG G+NLIGGN LVL+DPDWNPA D QA R+WR+GQ K VFIYR STGTIEEK+
Sbjct: 715 SAKAGGVGINLIGGNHLVLYDPDWNPAIDIQAMERIWREGQTKPVFIYRLFSTGTIEEKI 774
Query: 655 YQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNY 714
YQRQ+ KE + I ++ + + GNF S EDL+D+F+++++ S+ H+ + C C N
Sbjct: 775 YQRQLMKESISNSIVDKKFNDNG--GNF-SLEDLKDIFSYNENTNSDTHDLLQCN-CGNS 830
Query: 715 DDGAES 720
+ A +
Sbjct: 831 NSNAST 836
>gi|410077739|ref|XP_003956451.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
gi|372463035|emb|CCF57316.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
Length = 913
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/572 (43%), Positives = 329/572 (57%), Gaps = 59/572 (10%)
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +GCI+AD+MGLGKTLQ IALL+TLL QG GK ++ K IIV P+SLV+NW E+ KW+
Sbjct: 344 GAYGCIMADEMGLGKTLQCIALLWTLLRQGPQGKGLIDKCIIVCPSSLVNNWANELVKWL 403
Query: 267 G-GRVQLIALCESTRDDVVSGIDSFTDPCSSLQ----------VLIVSYETFRMHSSKFS 315
G G + +A+ +G S D S VLI+SYET R + +
Sbjct: 404 GPGTLTPLAIDGKKSSITDAGNASVADAIRSWAQAKGRNIVKPVLIISYETLRRNVDQLK 463
Query: 316 CSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPG 356
S + L++ DE HRLKN +LT +NDL E+FA+++F+NPG
Sbjct: 464 NS-NVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLSFSNPG 522
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+LG A FRR YE I+ GR+ AT++E K G + +LS V++FI+RRTN +LS +LP
Sbjct: 523 LLGSRAQFRRNYELPILRGRDAEATDKEIKKGEGQLEKLSNIVSKFIIRRTNDILSKYLP 582
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
K V+ L P Q LY + S++VK+ + + + L I LKKLCNHP L+
Sbjct: 583 CKYEHVIFVNLKPFQKSLYQQLLKSRDVKKLV-KGMGGPQPLKAIGLLKKLCNHPALL-- 639
Query: 477 TIKSGNPGTTGFE---DCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
FE + F P++F + SGK +L R L +
Sbjct: 640 ----------DFEKELESADFELPDVFRDLHNR-----EVQPQYSGKFAILERFLHKINA 684
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
+DD+IVL+SNYTQTLDL ++CR ++Y +RLDGT SI+KRQ LV+ FNDP EF+FL
Sbjct: 685 ESDDKIVLISNYTQTLDLIERMCRRKQYGVIRLDGTMSINKRQTLVDRFNDPEGQEFIFL 744
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF+STGTIEEK
Sbjct: 745 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 804
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+YQRQ K L + D+ S+ +LR LF +D HE HC RC
Sbjct: 805 IYQRQSMKMSLSSCV----VDAKEDVERLFSSGNLRKLFQLDEDTICNTHETYHCKRCNK 860
Query: 714 YDD---GAESIGEGDETNSANKNDQSDQEVTD 742
+ A ++ GD T + N + ++ D
Sbjct: 861 HGKQAVKANAMLYGDTTTWNHLNHDALEKTND 892
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGL 202
VP+ +DP L + LRPHQ EGV+F++ CV+GL
Sbjct: 241 VPVVIDPKLSKILRPHQVEGVKFLYRCVTGL 271
>gi|148230804|ref|NP_001085120.1| RAD54 homolog B [Xenopus laevis]
gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis]
Length = 895
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/616 (41%), Positives = 355/616 (57%), Gaps = 64/616 (10%)
Query: 133 DLPRTVENNVIEENFTLPPGVDP-----LVLWQPEEPQN-----DGGNLVPITVDPLLVR 182
D T ++N+ +E + P DP V+ +P + G +V + VDP L
Sbjct: 218 DSKTTNKDNMFKELQNIKPRHDPSAPNAFVMPKPSQQHQWAFNKSGLPIVDVVVDPYLAV 277
Query: 183 FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKP 241
LRPHQ+EG+ F++ECV G+ G ILAD+MGLGKTLQ I+L++TLL QG + KP
Sbjct: 278 HLRPHQKEGILFLYECVMGM-RVNERFGAILADEMGLGKTLQCISLIWTLLRQGPYGAKP 336
Query: 242 MVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTD-PCSSLQV 299
++K+A+IVTP SLV NW E +KW+G R+++ A+ D ++ F + P S V
Sbjct: 337 VIKRALIVTPGSLVKNWRKEFQKWLGTERIRVFAV------DQDHKVEEFVNSPLYS--V 388
Query: 300 LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------R 340
LI+SYE + S DL+ICDE HRLKN T +
Sbjct: 389 LIISYEMLLRCLEQIE-SLDFDLVICDEGHRLKNTSIKTTTSLTSLTCSKRIILSGTPVQ 447
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
NDL+EFFA++ F NP +LG + +R+ +E I+ REPTAT EEK LG ER++EL+
Sbjct: 448 NDLQEFFALIEFVNPAVLGSLSTYRKVFEEPIVRSREPTATPEEKNLGEERAAELARLTG 507
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY 460
FILRRT +++ LPPKI +V C+ + Q +LY ++S+ VK + + S L
Sbjct: 508 LFILRRTQEVINKFLPPKIENIVFCQPSQFQLDLYRRLLNSRAVKSCLLGNGENSPHLVC 567
Query: 461 ITALKKLCNHPKLIYDTI--KSGNPGT---TGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
I ALKKLCNHP L++ TI KS NP + +E FP + DGA +
Sbjct: 568 IGALKKLCNHPCLLFRTIQEKSTNPDQGEHSLYESIAELFPQDY-----------DGAKI 616
Query: 516 ELSGKMHVLARLLGHLRQRT---DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
S +L R +R+VLVS+YTQTL++ LC + Y RLDG T +
Sbjct: 617 SESESGKLLVLSKLLSGIRELSPSERVVLVSHYTQTLNILQALCVQHGYSCTRLDGQTPV 676
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
++RQ +V+ FN ++F+FLLSSKAGG GLNLIG + L+L+D DWNPAND QA ARVWR
Sbjct: 677 TQRQHIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGASHLILYDIDWNPANDIQAMARVWR 736
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
DGQ++ V IYR L+TG++EEK+YQRQ+SK+GL + S + S ++LR+LF
Sbjct: 737 DGQRRTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLTKKSEHIR---FSVDELRNLF 793
Query: 693 TFHDDVRSEIHENMHC 708
T H+D HE + C
Sbjct: 794 TLHEDTDCVTHELLEC 809
>gi|405964762|gb|EKC30211.1| UPF0505 protein C16orf62-like protein [Crassostrea gigas]
Length = 1826
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/632 (41%), Positives = 366/632 (57%), Gaps = 94/632 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPM 242
LRPHQREGV F++ECV G N +G G ILADDMGLGKTLQ I+L++TL QG + GKP+
Sbjct: 242 LRPHQREGVTFLYECVMGFRNLSG-RGAILADDMGLGKTLQCISLIWTLYKQGPYGGKPV 300
Query: 243 VKKAIIVTPTSLV---SNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQ 298
+K+A+I+TP SLV +NW EIKKW+G R++ A+ R I+ F + S
Sbjct: 301 IKRALIITPGSLVKASTNWFLEIKKWLGTERLKAFAVSSDNR------IEEFVN-TSIYP 353
Query: 299 VLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------- 339
++I+SYE F ++ S +F D++ICDE HRLKN+ T
Sbjct: 354 IVIISYEMFVRVYEQLQSLQF------DIIICDEGHRLKNNNIKTTSLIASMPTPRRVVL 407
Query: 340 -----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
+NDL+EFF++V F NPG+LG + F+R +E I+ R+P+A+ E+ +LG ER SE
Sbjct: 408 TGTPIQNDLQEFFSIVEFCNPGLLGSSGSFKRVFENPIVASRQPSASPEDIELGAERGSE 467
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
LS F+LRR+ + +LPPK V+ CK + LQ LY+ + K + + +
Sbjct: 468 LSRITKLFVLRRSQEINIKYLPPKCEVVLFCKPSALQLSLYSQMLQGKLFRSCLRSDGAT 527
Query: 455 SKILAYITALKKLCNHPKLIY----------DTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
L I ALKKLCNHP LI+ D I+ G + + FPP+ + +
Sbjct: 528 H--LVCIGALKKLCNHPSLIFTKASQAEECPDDIEEG----SVYSGLSSLFPPD-YQEKI 580
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
S E +GK+ VL+ +L + + ++IV+VSN+T+TLD+ Q C Y YL
Sbjct: 581 YS--------AEHAGKLKVLSEILIQI-HKDSEKIVIVSNHTKTLDILQQFCSNCGYGYL 631
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDG TS + RQ++V FN E VFLLSSKAGG GLNLIG +RL+L+D DWNPAND
Sbjct: 632 RLDGQTSTNIRQEIVTKFNSKHCLEKVFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDL 691
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA ARVWRDGQK++++IYR L+TGTIEEK+YQRQ+SK+GL + + A S
Sbjct: 692 QAMARVWRDGQKRKIYIYRLLTTGTIEEKIYQRQISKQGLSGAVMDLKNKREAQ----FS 747
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIG 744
E+LRDLF+ +++ + H+ + C +C DG + G T+ AN Q+ +
Sbjct: 748 REELRDLFSLNENTICDTHDLIKC-QC----DGRDYTG----TSEANPLPQTARSCQ--- 795
Query: 745 GFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGH 776
G A + K K+ LG E+L +W H
Sbjct: 796 --LGSASIIQKTKT----LGM---EELLDWKH 818
>gi|361128810|gb|EHL00736.1| putative DNA repair protein rhp54 [Glarea lozoyensis 74030]
Length = 643
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/654 (39%), Positives = 361/654 (55%), Gaps = 102/654 (15%)
Query: 84 AVCRKPFKPPCSNGYDNGNDQLARRL------CARKRFVPWGSSRPVLVTITNRLDLPRT 137
+V P +PP + G G +A+ L A + P +P + + D P
Sbjct: 15 SVTYNPNRPPPTLGLRQGAVFIAKALHDPSGEFAIVLYDPTIDEKPKTIEEAKKADAPEA 74
Query: 138 --VENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFM 195
++ ++ + G+ +V + E P+ VP+ +DP L + LRPHQ EGV+FM
Sbjct: 75 PKIDAPLVHKTLAEILGIKKVV--EGERPK------VPVVIDPRLSKVLRPHQIEGVKFM 126
Query: 196 FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLV 255
++CV+G++ +GCI+AD +Q A+ DGK ++ L
Sbjct: 127 YKCVTGMIEEKA-NGCIMAD------AIQPFAI---------DGK--------LSKEELT 162
Query: 256 SNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
S +I++W + SG + T P V+IVSYET R++ +
Sbjct: 163 S----QIRQWA----------------IASG-RAVTRP-----VIIVSYETLRLNVGELK 196
Query: 316 CSESCDLLICDEAHRLKN--DQTLTN-----------------RNDLEEFFAMVNFTNPG 356
++ L++CDE HRLKN QT T +NDL E+FA+++F NPG
Sbjct: 197 NTK-IGLMLCDEGHRLKNGDSQTFTALNELNVTRRVILSGTPIQNDLSEYFALISFANPG 255
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+LG FR+ YE I+ GR+ ++++++ G ER EL VN+FI+RRTN +LS +LP
Sbjct: 256 LLGTRLEFRKQYEIPILKGRDAAGSDKDRQKGDERLRELLNVVNKFIIRRTNDILSKYLP 315
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
K VV C L P Q +LYNHFI S ++K + K S+ L I LKKLCNHP L+
Sbjct: 316 VKYEHVVFCNLAPFQLDLYNHFISSPDIKALL--RGKGSQPLKAIGMLKKLCNHPDLL-- 371
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
+ PG C F+P + + W SGKM VL R+L +RQ T+
Sbjct: 372 NLPDDLPG------CENFYPEDYVPKDARGRDRDIKPWY--SGKMQVLDRMLARIRQDTN 423
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSS 596
D+IVL+SNYTQTLD+F +LCR R Y LRLDGT ++SKRQKLV+ FNDP EFVFLLSS
Sbjct: 424 DKIVLISNYTQTLDMFDKLCRHRGYGSLRLDGTMNVSKRQKLVDKFNDPDGAEFVFLLSS 483
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
KAGGCGLNLIG NRLVLFDPDWNPA D+QA ARVWRDGQKK F+YRF++TGTIEEK++Q
Sbjct: 484 KAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQ 543
Query: 657 RQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
RQ K+ L + DS+ + + LR+LF +H S+ H+ C R
Sbjct: 544 RQSHKQSLSSCV----VDSAEDVERHFTLDSLRELFQYHGKTTSDTHDTFKCKR 593
>gi|164660184|ref|XP_001731215.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966]
gi|159105115|gb|EDP44001.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966]
Length = 713
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/506 (46%), Positives = 312/506 (61%), Gaps = 52/506 (10%)
Query: 160 QPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGL 219
+P P D VP+ +DP L + LRPHQ EGV+F+F C +G+++ HGCI+AD+MGL
Sbjct: 218 KPHMPIRDK---VPVVIDPRLGKILRPHQIEGVKFLFRCTTGMVSENA-HGCIMADEMGL 273
Query: 220 GKTLQSIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRV--QLIALC 276
GKTLQ I LL+TLL Q + GK ++KAI+V P+SLV NW E+ KW+G L
Sbjct: 274 GKTLQCITLLWTLLKQSPNAGKSTIQKAIVVCPSSLVRNWANELVKWLGASAPGSLALDG 333
Query: 277 ESTRDDVVSGIDSFTDPCSSLQ----VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLK 332
+R+ + + + D CS V+IVSYET R +E LL+CDE HRLK
Sbjct: 334 RLSREQMFESVQRWAD-CSGRAIVHPVMIVSYETLRNLQELLGNTE-IGLLLCDEGHRLK 391
Query: 333 NDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N ++T + NDL E+FA++NF P +LG+ FR+++E I+
Sbjct: 392 NADSMTFQSLAMLKVKRRVILSGTPIQNDLSEYFALINFAIPDMLGNRNEFRKHFELDIL 451
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
GR+ ATE+EK++G E+ +LS V+ FI+RRTN +LS +LP K VV C+L+P Q +
Sbjct: 452 RGRDAGATEKEKEVGREKLQQLSGMVSPFIIRRTNDILSKYLPVKYEHVVFCRLSPFQVD 511
Query: 434 LYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR 493
LYN F+ S + R + Q L I LKKLCNHP L+ E
Sbjct: 512 LYNLFLRSPVIARLLRGIGSQP--LKAIGILKKLCNHPDLLNL--------PADLEGSEE 561
Query: 494 FFPPEMFSGRSGSWTGGD--GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
+P + GD V LSGK+ VL R L +R +TDD+IVL+SNYTQTLDL
Sbjct: 562 LYPE--------GYRPGDRRNVAVGLSGKLAVLERFLTSMRAKTDDKIVLISNYTQTLDL 613
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
F +LCR RR+ + RLDGT +I+KRQ LV+ FN+P +EF+FLLSSKAGGCGLNLIG NRL
Sbjct: 614 FERLCRSRRWGFFRLDGTMNINKRQNLVDRFNNPEGSEFIFLLSSKAGGCGLNLIGANRL 673
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKK 637
VLFDPDWNPA+D+QA ARVWRDGQKK
Sbjct: 674 VLFDPDWNPASDQQALARVWRDGQKK 699
>gi|323450080|gb|EGB05963.1| hypothetical protein AURANDRAFT_1051, partial [Aureococcus
anophagefferens]
Length = 531
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/566 (42%), Positives = 327/566 (57%), Gaps = 66/566 (11%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH---GCILADDMGLGKTLQSIALLY 230
+ V PLL +FLRPHQREGVQF+++CV+GL A + G ILADDMGLGKTLQ++AL+Y
Sbjct: 1 VVVPPLLAQFLRPHQREGVQFLYDCVAGLREYAHDYSGQGAILADDMGLGKTLQTVALVY 60
Query: 231 TLLCQGF--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL---CESTRDDVVS 285
LL +G DG P VK+ ++ P SLV NW+AE KWV R + C + V
Sbjct: 61 ALLQRGSVGDGSP-VKRIVVACPCSLVPNWKAEFDKWVNARAATKSERVDCRAVDGKVGE 119
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE-SCDLLICDEAHRLKNDQT-------- 336
ID+F P VL++SYE+ ++H +K S S +CDLL+CDEA RLK +T
Sbjct: 120 AIDAFLSPGRPFHVLLISYESLKLHVAKLSASATACDLLVCDEAQRLKGRKTQLSAALGS 179
Query: 337 --------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
LT +NDL+EFFA+ +F NPG+LG FR+ ++ I G A +
Sbjct: 180 LRCARRILLTGTPVQNDLDEFFALADFANPGVLGTPDAFRKTFDAPIAKGLLRGAAPGDV 239
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
KL +R LS +F+LRR N L + HLPPK+++V+ C+ Q + K ++
Sbjct: 240 KLAQDRQKILSLIAGRFLLRRENKLNAAHLPPKLVQVLVCRPAAPQRRAIAALLGEKRLQ 299
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
A++ KQ+ +LAYI KK+C+HP L D G + RF
Sbjct: 300 HALA--GKQADVLAYIGRYKKICDHPSLDDD---------AGCDARARFSSERK------ 342
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQR-TDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
SGK+HVL RLL LR +R+V+V+N T +L+L ++LC +P+
Sbjct: 343 ------------SGKLHVLYRLLRELRGNGGQERVVVVANQTSSLELVSRLCSREGWPWC 390
Query: 565 RLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
LDG T + +R+ L + FNDP+ ++ F FLLSS AGGCGLNLIGG+RLVLFD WNPA D
Sbjct: 391 MLDGKTPLKQRKLLNDEFNDPACEHHFCFLLSSTAGGCGLNLIGGSRLVLFDSSWNPATD 450
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
KQAAAR WRDG +R + YR L+ GTIEEK+YQRQ++KEGL V++ Q N
Sbjct: 451 KQAAARCWRDGNPRRCYTYRLLTAGTIEEKIYQRQLAKEGLACVVEDR------AQVNVF 504
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCT 709
++L +LF F D S+ H + C
Sbjct: 505 DADELHNLFAFDDAATSDTHACLGCA 530
>gi|302655807|ref|XP_003019687.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517]
gi|291183425|gb|EFE39042.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517]
Length = 629
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/570 (42%), Positives = 323/570 (56%), Gaps = 95/570 (16%)
Query: 188 QREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAI 247
Q + +F++ C +GL++ HGCI+AD V+KA+
Sbjct: 68 QPQKSEFLYRCTTGLVDKNA-HGCIMAD---------------------------VQKAV 99
Query: 248 IVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTRDDVVSGIDSFTDPCSSL 297
I P +LV NW E+ KW+G G+ L R ++ S P
Sbjct: 100 IACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLRQWAIASGRSVVRP---- 155
Query: 298 QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------------ 339
VLIVSYET RM+S + ++ LL+CDE HRLKN + T
Sbjct: 156 -VLIVSYETLRMNSDELRDTQ-IGLLLCDEGHRLKNADSQTYVALNKLNVQKRVILSGTP 213
Query: 340 -RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
+NDL E+F++++F NPGILG + F + YE I+ GR+ T+E++K G ER +EL
Sbjct: 214 IQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQKKGNERLAELLNL 273
Query: 399 VNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKIL 458
VN+FI+RR+N LLS +LP K VV C L P Q +LYNHFI S +K + K S+ L
Sbjct: 274 VNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLL--RGKGSQPL 331
Query: 459 AYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF--SGRSG-----SWTGGD 511
I LKKLCNHP L+ + PG C ++FP +M +GR G +W
Sbjct: 332 KAIGILKKLCNHPDLL--KLSEDLPG------CEQYFPEDMTVSNGRRGDREVKTW---- 379
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R Y +RLDGT
Sbjct: 380 -----YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGCIRLDGTMG 434
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
+ KR KLV+ FNDP+ EFVFLLSSKAGGCG+NL+G NRLVLFDPDWNPA D+QA ARVW
Sbjct: 435 VKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVW 494
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
RDGQ K F+YRF++TGTIEEK++QRQ K+ L + DS+ S + LR+L
Sbjct: 495 RDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLDSLREL 550
Query: 692 FTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
F F S+ H+ C RC+ DG + I
Sbjct: 551 FQFKPGTTSDTHDTFKCKRCR--PDGTQHI 578
>gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
Length = 687
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/603 (40%), Positives = 340/603 (56%), Gaps = 62/603 (10%)
Query: 150 PPGVDPLVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P D LV+ +P N +V + VDP + R LRPHQR+GV F++ECV G+ +
Sbjct: 100 PNAPDALVMPRPSVDHQRNFNTNKLCVVDVVVDPYISRRLRPHQRDGVIFLYECVMGMRD 159
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
+G G ILAD+MGLGK+LQ IAL++TL QG + GK +K+ ++VTP SLV NW E +
Sbjct: 160 FSGF-GAILADEMGLGKSLQCIALIWTLYKQGMYGGKAPIKRILLVTPGSLVQNWSREFR 218
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
KW+G ++ + + D V + ++I+SYE F + S DLL
Sbjct: 219 KWLG--IERFKVFPVSSDKRVEEFIKY----PQYPLMIISYEMF-VRSCDTLKGIKFDLL 271
Query: 324 ICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN T +NDL+EF+A+V F NPGILG A F
Sbjct: 272 ICDEGHRLKNSSNKTFALISSVQTRRRVLVTGTPIQNDLQEFYAIVEFCNPGILGSEAAF 331
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
RR YE I R P ++EK LG R+ ELS F LRRT ++ +HLPPK+ V+
Sbjct: 332 RRIYEDPIAKSRLPGCNKKEKNLGESRAIELSRLTKLFCLRRTQEVIIHHLPPKVEYVIF 391
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISE-ETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C+ PLQ +Y H + S+ K IS E+ + I AL+K+CN P LIY+ +K
Sbjct: 392 CRTAPLQVLIYRHLLSSRLFKECISAVESNYCRHFMCINALRKVCNEPNLIYEAVKDAES 451
Query: 484 G--------------TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLG 529
T + +PP D E SGK+ VL+ LL
Sbjct: 452 HLIDDEIGKSIEEEHTLLYAGIQSLYPPNY---------SPDTFTTEHSGKLAVLSNLLD 502
Query: 530 HLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
+ Q + +++V+VSN+T+TLD+ ++C+ + Y Y+RLDG+T SKR +V +FN
Sbjct: 503 WIYQNSPKEKVVVVSNFTRTLDVLQKMCKSKNYRYVRLDGSTPTSKRHTIVENFNSSYSK 562
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
FVFLLSSKAGG GLNLIG +RLVL+D DWNPAND QA AR+WRDGQK+ V+IYR ++TG
Sbjct: 563 TFVFLLSSKAGGTGLNLIGASRLVLYDIDWNPANDLQAMARIWRDGQKRDVYIYRLVTTG 622
Query: 649 TIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
TIEEK++QRQ+ K L + D+ + + + +DL +LF+ +D+ + H+ + C
Sbjct: 623 TIEEKIFQRQVMKHDLSGAVM----DTRESGRSQFTRKDLHNLFSLREDIVCDTHKLLGC 678
Query: 709 TRC 711
C
Sbjct: 679 NCC 681
>gi|367000820|ref|XP_003685145.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
gi|357523443|emb|CCE62711.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
Length = 944
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/536 (44%), Positives = 323/536 (60%), Gaps = 45/536 (8%)
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +GCI+AD+MGLGKTLQ I L++TLL QG GK ++ K IIV P+SLV+NW E+ KW+
Sbjct: 368 GAYGCIMADEMGLGKTLQCITLMWTLLKQGPKGKRLIDKCIIVCPSSLVNNWANELIKWL 427
Query: 267 G-GRVQLIAL----------CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
G G + +A+ +T V G VLI+SYET R + +
Sbjct: 428 GPGTLTPLAIDGKKSSLANGGNATVSQAVRGWAQARGRNIVKPVLIISYETLRRNVDQLQ 487
Query: 316 CSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPG 356
+ L++ DE HRLKN ++LT +NDL E+F+++NF+NPG
Sbjct: 488 GCK-VGLMLADEGHRLKNGESLTFTALNSIDCPRRVILSGTPIQNDLSEYFSLLNFSNPG 546
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+LG + FRR +E I+ GR+ A++E+ K G + +LS V++FI+RRTN +LS +LP
Sbjct: 547 LLGTRSEFRRNFEIPILNGRDSEASDEDIKKGERQLQKLSHIVSKFIIRRTNDILSKYLP 606
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ-SKILAYITALKKLCNHPKLIY 475
K V+ L P Q ++Y I +K V A+ K S +L I LKKLCNHP LI
Sbjct: 607 CKYEHVIFVNLKPFQRDVYKSIIKTKEVAEAVKNSKKGGSMMLRSIGLLKKLCNHPDLIN 666
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
+ N +D + P+ ++ + + + +E SGK +L R L + +
Sbjct: 667 LEEELDN-----LDDSLVI--PDDYNISNAAKS--RDVRIEFSGKFAILERFLHKINTES 717
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLS 595
+D+IVL+SNYTQTLDL +LCR R+Y LRLDGT +I+KRQKLV+ FN P + EF+FLLS
Sbjct: 718 NDKIVLISNYTQTLDLIEKLCRRRQYGVLRLDGTMNINKRQKLVDRFNSPDEPEFIFLLS 777
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGGCG+NLIG NRL+L DPDWNPA+D+QA ARVWRDGQKK FIYRF+STGTIEEKV+
Sbjct: 778 SKAGGCGINLIGANRLILLDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKVF 837
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
QRQ K L + E+ D ST++L+ LF ++ + HE C RC
Sbjct: 838 QRQSMKMSLSSCVVDEKEDVE----RLFSTDNLKQLFQLNEKTICDTHETYGCKRC 889
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 28/32 (87%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL 203
+P+ +DP+LV+ LRPHQ EGV+F++ CV+GL+
Sbjct: 266 IPVVLDPMLVKILRPHQVEGVKFLYRCVTGLV 297
>gi|393217524|gb|EJD03013.1| hypothetical protein FOMMEDRAFT_123160 [Fomitiporia mediterranea
MF3/22]
Length = 1026
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/620 (38%), Positives = 356/620 (57%), Gaps = 57/620 (9%)
Query: 135 PRTVENNVIEENFTLPPGVDPL-----VLWQPEEPQNDGGNL-----VPITVDPLLVRFL 184
P + I ++ P DPL V+ +P + NL +P+ VDP+L R L
Sbjct: 301 PVSFYGQAISKSKPATPLHDPLAEGAVVMKEPTKEHQRKFNLKGRPVIPVVVDPILARHL 360
Query: 185 RPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMV 243
RPHQ+EGV+FM+ECV GL G GCILAD+MG+GKTLQ+I L++TLL Q + G P V
Sbjct: 361 RPHQKEGVKFMYECVMGLRKHEG-QGCILADEMGMGKTLQTITLVWTLLKQNCYAGTPAV 419
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
K +IV P +L++NW+ E KW+G I + ++ V I+S QVLI+
Sbjct: 420 GKVMIVCPVTLIANWKKEFHKWLGKDRLGIFTGDKNKEAVKQFINSKIH-----QVLIIG 474
Query: 304 YETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTN-------------------RNDL 343
YE R S+ + C L+ICDE HRLK+ T+ +NDL
Sbjct: 475 YEKLRTVISELAYCLPPIGLIICDEGHRLKSSNNKTSTMFEALSTPRRIILSGTPIQNDL 534
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
EF AM +F NPG+L D + FR+ +E +I+ R P + +E+++G R ++L F+
Sbjct: 535 SEFHAMADFCNPGLLDDYSIFRKVFENAILKSRTPDCSAKEREIGEGRQAQLQTVARSFV 594
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR ++L+N+LPPK VV +PLQ +++ + + + +S LA I
Sbjct: 595 LRREASILTNYLPPKYEYVVFVTPSPLQRQMFVKILQPDTLATVLHGSMARS--LAMIQL 652
Query: 464 LKKLCNHPKLIYDTI-----KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS 518
L KL N P L+ + K+ + F++ ++ P E + + LS
Sbjct: 653 LTKLSNSPILLKAALEKREDKAESDAHEAFDEAVKLLP-ECARAQDPA----------LS 701
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GK+ L+ LL +LR+ TD++ +LVS+YT TLD+ + C+E++Y +LRLDG T ++KRQ+
Sbjct: 702 GKLQALSNLLAYLRKETDEKCILVSHYTSTLDVIEEFCKEKKYTFLRLDGQTPVAKRQEY 761
Query: 579 VNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
V+ FN P F+FLLS+KAGG GLNLIG +RL L D DWNP++D Q+ AR+ RDGQK+
Sbjct: 762 VDRFNKAPQSGAFLFLLSAKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMARIHRDGQKR 821
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
VFIYR L+ GTI+EK+YQRQ++K L ++ ++ DS +++ + + ++LRDLFTF+
Sbjct: 822 PVFIYRLLTAGTIDEKIYQRQITKLALSASLMGKDAPDSGSSKSDSFTQKELRDLFTFYQ 881
Query: 697 DVRSEIHENMHCTRCQNYDD 716
H+ + C + +D+
Sbjct: 882 HTSCHTHDLIGCPCTRGHDE 901
>gi|189529831|ref|XP_688979.3| PREDICTED: DNA repair and recombination protein RAD54B [Danio rerio]
Length = 1174
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/609 (42%), Positives = 358/609 (58%), Gaps = 62/609 (10%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G LV + +DP L LRPHQ+EGV F++EC+ G+ AG G ILAD+MGLGKTLQ +
Sbjct: 544 GAPLVDVVIDPHLTNHLRPHQKEGVVFLYECLMGM-RLAGRCGAILADEMGLGKTLQCVC 602
Query: 228 LLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVS 285
+L+TLL QG + G+P++K+A++V P SLV NW AE KW+G R+ + + + R +
Sbjct: 603 VLWTLLRQGPYGGRPVMKRALVVCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVE--- 659
Query: 286 GIDSFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
D + P S VL++SYE R+ F +LICDE HRLKN T
Sbjct: 660 --DFVSSPLCS--VLVISYEMLLRSVDRLKELDFG------VLICDEGHRLKNSNIKTAG 709
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL+EF++++ F NPGILG +A +R+ YE I+ R+P+ T
Sbjct: 710 ALTALSCTRRLILTGTPVQNDLQEFYSIIEFVNPGILGTSAAYRKIYEEPILRSRQPSCT 769
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EEE+ +G ER++EL F LRRT +++ +L +I V CK T LQ LY + +
Sbjct: 770 EEERCIGEERAAELFRLTGVFTLRRTQEIINQYLSERIEWTVFCKPTELQIRLYRVLLST 829
Query: 442 KNVKRAIS--EETKQSKILAYITALKKLCNHPKLIYDTIK---SGNPGTTGFEDCIRFFP 496
+ ++ +S S L I ALKKLCNHP L+Y+T++ +E ++
Sbjct: 830 RPIRACLSGSHTYTHSPHLVCINALKKLCNHPALLYNTLQVRMCSEKADEMYEGEVKELF 889
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ--RTDDRIVLVSNYTQTLDLFAQ 554
PE +S +G+++ D SGK+ VL LL ++ RTD R+VLVSN+TQTLDL
Sbjct: 890 PEEYS--TGAFSTAD------SGKLLVLTDLLSAIQHVNRTD-RVVLVSNHTQTLDLLQD 940
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
+C + Y + RLDG T + +RQK+V+ FN P + F+ LLSSKAGG GLNLIG + LVL+
Sbjct: 941 VCDQIGYKWCRLDGQTPVGQRQKIVDSFNSPHSSSFLLLLSSKAGGVGLNLIGASHLVLY 1000
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
D DWNPAND QA ARVWRDGQKK V IYRFL+TG+IEEK+YQRQ+SK+GL +
Sbjct: 1001 DIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGSIEEKIYQRQVSKQGLSGTVV--DLT 1058
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETN--SANK 732
A +F S E+LRDLF F + H+ ++C +C + S+ E E S
Sbjct: 1059 KKAEHISF-SAEELRDLFRFDPNTTCLTHDLLNC-KCSGDGNTPGSVKESSEDTGRSCQL 1116
Query: 733 NDQSDQEVT 741
Q+D ++
Sbjct: 1117 GRQADNAIS 1125
>gi|393245087|gb|EJD52598.1| hypothetical protein AURDEDRAFT_181169 [Auricularia delicata
TFB-10046 SS5]
Length = 983
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 259/744 (34%), Positives = 399/744 (53%), Gaps = 78/744 (10%)
Query: 81 EGAAVCRKPFKPPCSNGY----DNGNDQLARRLCARKRFVPWGSS------------RPV 124
+G + +P+K P + G+ D QL+ R+ + +G S PV
Sbjct: 193 KGKTMGSRPWKDPLTVGHTLQLDGKEIQLSARIKKNEMPSLFGDSAGASQENAINIDEPV 252
Query: 125 LVTITNR-LDLPRTVENNVIEENFTL--PPGVDPLVLWQPEEPQNDGGN-----LVPITV 176
L + T + + N V+ ++ L P +V+ P + N +VP+ +
Sbjct: 253 LASATKPFVAVASFYSNKVVRQSGPLHSPDAEGAIVMKAPSKDHQAIHNKKNNPVVPVVI 312
Query: 177 DPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
DP L R LRPHQ EGV+F++ECV G+ G GCILADDMG+GKTLQ+I L++TL+ Q
Sbjct: 313 DPFLARHLRPHQIEGVKFVYECVMGMRPHEGF-GCILADDMGMGKTLQTITLVWTLIKQN 371
Query: 237 F--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC 294
+ P V K ++V P +L++NW E KKW+G + + + + ++ I+S +
Sbjct: 372 MYANQGPAVGKVMVVCPVTLINNWAKEFKKWLGRDRVGVFIGDKDKANIKQFINSRAN-- 429
Query: 295 SSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTNR------------- 340
VLI+ YE R + + CS L++CDE HRLK+ +N+
Sbjct: 430 ----VLIIGYEKLRTVIADLAYCSPPIGLIVCDEGHRLKSANNKSNKMFEALRTKRRVIL 485
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
NDL EF AM +F NPG+L D + F+R YE+ I+ R P T++E + G RS+
Sbjct: 486 SGTPIQNDLSEFHAMADFCNPGLLDDYSTFKRIYESPILKSRAPDRTKKELEEGEARSAR 545
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L A F+LRR ++L+N+LPPK V T LQ E+++ + +++ R T
Sbjct: 546 LHAIAKSFVLRREASILNNYLPPKHEYTVFVTPTELQHEMFSRLLLERHINRLSRGST-- 603
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
+ +LA I L KL P L+ K + I P + T D
Sbjct: 604 ANVLALIRTLTKLSTTPMLL--KAKEDAASDDPISEAITLIPEK---------TAVDDMT 652
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGK+ +L+++L LR+ T++++++VS++T TLD+ C+++RY Y RLDG T SK
Sbjct: 653 V--SGKLSILSKILTILRKETEEKVIIVSHFTSTLDVIESYCKKQRYGYFRLDGQTQTSK 710
Query: 575 RQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
RQ+ V++FN S K FVFLLS+KAGG GLNL+G +RLVL D DWNP++D QA AR+ RD
Sbjct: 711 RQEYVDNFNRTSQKQHFVFLLSTKAGGVGLNLVGASRLVLVDSDWNPSHDLQAMARIHRD 770
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSATQGNFLSTEDLRDLF 692
GQK+ VFIYR +STGTI+EK++QRQ++K GL +++Q Q +S ++ + S ++LRDLF
Sbjct: 771 GQKRPVFIYRLISTGTIDEKIFQRQVTKLGLSDSLMKQGQVGNSTSKSDSFSPQELRDLF 830
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
T H+ H+ + C C + ++ + GD + +QE +D +
Sbjct: 831 TVHNTTTCHTHDLLDCP-CDSENNPPDGEENGDPAD-------GEQESSDDESRGFVVAS 882
Query: 753 LHKLKSSEKQLGTPLEEDLNNWGH 776
K+ ++ K+ L+ W H
Sbjct: 883 TLKMSTATKKRRKQELASLDEWTH 906
>gi|115921268|ref|XP_787494.2| PREDICTED: DNA repair and recombination protein RAD54B, partial
[Strongylocentrotus purpuratus]
Length = 629
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/597 (40%), Positives = 337/597 (56%), Gaps = 71/597 (11%)
Query: 150 PPGVDPLVLWQP---EEPQNDGGN--LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P D LV+ +P + QN+ N +V + VDP LV LRPHQ++GV F++EC+ GL
Sbjct: 13 PTHPDALVMPRPPSSHQWQNNQRNDSIVDVVVDPHLVSKLRPHQQKGVIFLYECIMGLRQ 72
Query: 205 AAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
G G ILAD+MGLGKTLQ I L++TL QG + GKP++K+ +IVTP SLV NW E +
Sbjct: 73 YEGC-GAILADEMGLGKTLQCITLVWTLFKQGPYGGKPIIKRVLIVTPGSLVKNWCREFR 131
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
KW+G R+ + + + ++ F V+++SYE ++ + DL
Sbjct: 132 KWLGSERISVFPVSSDKK------VEEFKK-SPLFPVMVISYEMMVRYADDIR-GITFDL 183
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
++CDE HRLKN T +NDL+EF+++V F NPG+LG +
Sbjct: 184 VVCDEGHRLKNSTIKTASLLSSLAVRRRILLTGTPIQNDLQEFYSIVEFCNPGVLGTSGS 243
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F R YE I+ +P+AT+EEK LG R++ELS + F+LRRT + + +LPPK+ VV
Sbjct: 244 FHRVYEEPILRSNQPSATKEEKTLGAARATELSRLTSLFVLRRTQEINNKYLPPKVETVV 303
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----ETKQSKILAYITALKKLCNHPKLIYDTI 478
CK + LQ LY H + S ++ +S + S L I ALKKLCN P L+Y
Sbjct: 304 FCKPSALQLRLYQHLLRSPLIRSCLSRGYASSASAGSPHLVCIGALKKLCNDPSLLYQAS 363
Query: 479 KSGNPG-----------------TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
+ + + ++ + +PPE GR + GK+
Sbjct: 364 RKADEEGKRRGGESWLLDHDDEEESLYKGLLPIYPPEYTEGR---------PLLAHCGKL 414
Query: 522 HVLARLL--GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
VL+ +L H +R+VLVSNYTQTLD+ LC Y + RLDG+T +KRQ +V
Sbjct: 415 CVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSIEGYQFCRLDGSTPTAKRQSIV 474
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
HFN E +FLLSSKAGG GLNLIG +RL+L+D DWNPAND QA ARVWRDGQKK V
Sbjct: 475 EHFNSSYAKETIFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKKTV 534
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+IYR ++ GTIEEK+YQRQ+SK+ L + + S + + S EDLR + D
Sbjct: 535 YIYRLITAGTIEEKIYQRQISKQSLSGAVVDAKGQSGSVK---FSLEDLRKNLSMGD 588
>gi|156845511|ref|XP_001645646.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156116312|gb|EDO17788.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 941
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/541 (43%), Positives = 321/541 (59%), Gaps = 57/541 (10%)
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +GCI+AD+MGLGKTLQ IAL++TLL QG GK ++ K IIV P+SLV+NW E+ KW+
Sbjct: 373 GAYGCIMADEMGLGKTLQCIALMWTLLKQGPQGKSLIDKCIIVCPSSLVNNWANELIKWL 432
Query: 267 G-GRVQLIALCESTRDDVVSG--------IDSFTDPCSS---LQVLIVSYETFRMHSSKF 314
G G + +A+ + + + +G I S+ VLI+SYET R + +
Sbjct: 433 GPGTLSPLAI-DGKKSSITNGGNATVAHAIKSWAQAKGRNIVKPVLIISYETLRRNVDQL 491
Query: 315 SCSESCD--LLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFT 353
+CD L++ DE HRLKN +LT +NDL E+FA++NF+
Sbjct: 492 V---NCDVGLMLADEGHRLKNADSLTFTALDSINCPRRIILSGTPIQNDLSEYFALLNFS 548
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
NPG+LG + FRR +E I+ GRE AT+E K + +LS V++FI+RRTN +LS
Sbjct: 549 NPGLLGSRSEFRRNFEIPILAGREADATDEALKKSTLQLQKLSEVVSKFIIRRTNDILSK 608
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKL 473
+LP K V+ + P Q +LY +I + ++ K L I LKKLCNHP L
Sbjct: 609 YLPCKYEHVIFVNMKPFQRDLYKSYIE-------LRKDDSFEKPLKAIGVLKKLCNHPDL 661
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
+ ++S P D + P ++G + SGK +L R L +
Sbjct: 662 L--DLESELPE---MGDSVSI-PDGYVISKNGK---SKDVQPQFSGKFAILERFLHKINT 712
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
+DD+IVL+SNYTQTLDL +LCR ++Y +RLDG+ +I+KRQKLV+ FN P +EF+FL
Sbjct: 713 ESDDKIVLISNYTQTLDLVERLCRRKQYGSVRLDGSMTINKRQKLVDRFNSPDSHEFIFL 772
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK FIYRF++TGTIEEK
Sbjct: 773 LSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFIATGTIEEK 832
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
VYQRQ K L + D+ + +DL+ LF ++ + + HE +C RC
Sbjct: 833 VYQRQSMKMSLSSCV----VDAKEDVDRLFTADDLKKLFLLNEKTQCDTHETFNCKRCNK 888
Query: 714 Y 714
+
Sbjct: 889 F 889
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL 203
+P+ +DP L + LRPHQ EGV+F++ CV+GL+
Sbjct: 252 IPVVIDPRLAKILRPHQVEGVRFLYRCVTGLI 283
>gi|453087791|gb|EMF15832.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 978
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/563 (42%), Positives = 322/563 (57%), Gaps = 50/563 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDPLL R LRPHQR+GVQFM+ECV G+ + G G ILAD+MGLGKTLQ+IA
Sbjct: 269 GKQIVDVVVDPLLTRSLRPHQRQGVQFMYECVMGMKDYDG-EGAILADEMGLGKTLQTIA 327
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
LL+TLL Q D P++KKA+IV P SLV NW E KW+G + + E+ +
Sbjct: 328 LLWTLLKQNPIADAPPVIKKALIVCPVSLVKNWHKEFNKWLGNDRIGVYMVENGK----M 383
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND--------QTL 337
+ FT + V+I+ YE + + D++ICDE HRLK +TL
Sbjct: 384 RLTDFTK-GKAYHVMIIGYEKLTKVQKELQGASGIDIVICDEGHRLKTSTNKAASAIKTL 442
Query: 338 TN-----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+ +NDL EF+ MV+F NP IL F+R +ET I+ R+P A E++ +
Sbjct: 443 STERRVILSGTPVQNDLAEFYTMVDFVNPNILSKYTTFKREFETPIMKSRQPGAAEKDLE 502
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ +FILRRT +L +LPPK VV C+ T Q ++Y I ++
Sbjct: 503 KGEARSEELANLTGKFILRRTAEILDKYLPPKTEYVVFCRPTDAQRQIYRTIISTQAFAT 562
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A++ L I LKK+CN P L+ T G E+ R PE G
Sbjct: 563 ALNSPAVS---LELIMILKKVCNSPSLLLGTNVKG-------EEIKR---PEFIEGIPRK 609
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
A S K+ VL LL ++ TDD++VLVSNYT T+D+ A L YLRL
Sbjct: 610 LLSTPAA----SAKIQVLDELLVKIKNETDDKVVLVSNYTSTMDILAALITSLGMSYLRL 665
Query: 567 DGTTSISKRQKLVNHFNDPSK-NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T SKRQ +V+ FN S+ N F+FLLS+KAGG G+NLIG +RL+++D DWNPA D Q
Sbjct: 666 DGSTPQSKRQDMVDRFNRSSQSNSFIFLLSAKAGGTGINLIGASRLIMYDLDWNPALDLQ 725
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+ RDGQKK FIYRF++ G ++EK++QRQ++K GL I D A F ST
Sbjct: 726 AMARIHRDGQKKPCFIYRFVTQGAMDEKIFQRQVTKTGLADSI----VDGKAAASGF-ST 780
Query: 686 EDLRDLFTFHDDVRSEIHENMHC 708
+LRDLF+ ++ + H + C
Sbjct: 781 AELRDLFSLDEEDDCQTHRLLGC 803
>gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta]
Length = 843
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 267/678 (39%), Positives = 368/678 (54%), Gaps = 95/678 (14%)
Query: 159 WQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
W +E Q ++VDP LV LR HQR GV F++EC+ GL G ILAD+MG
Sbjct: 230 WMDQEEQE-------VSVDPCLVAKLREHQRYGVVFLYECLMGL-RVPDYFGAILADEMG 281
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCE 277
LGKTLQ IAL++T+L +G GKP+VK+ +I+TP+SL +NWE E KW+G R+ +
Sbjct: 282 LGKTLQCIALIWTMLKKGPYGKPIVKRVLIITPSSLCNNWEKEFVKWLGSHRIFPYVVGA 341
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETF-RMHSSKFSCSESC-DLLICDEAHRLKNDQ 335
T+ D P +S V+I+SYE F + H +E DL++CDE HRLKN+
Sbjct: 342 KTKPK-----DFIKYPKNS--VMIISYEMFIKCH---MEINEIVFDLIVCDEGHRLKNNN 391
Query: 336 T----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
LT +NDL+EF+A+++F NPGILG A ++ YYE I+ +
Sbjct: 392 VKAAKLLYEANCKKRIILTGTPIQNDLKEFYALIDFINPGILGTATEYKNYYEEPIVASQ 451
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
P A ++ LG ERS+EL + FILRRT + ++ +LP K V+ C L+ Q +LY+
Sbjct: 452 CPHANDDVLSLGKERSTELYERTKSFILRRTQSTINKYLPHKYEIVLFCSLSKKQKDLYS 511
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
+ K I E K S + I ALKK+CNHP L + ++ + +
Sbjct: 512 LVTDAWFNK--ICLEDKNSMHFSIIIALKKICNHPNLFINE-----------KENVLY-- 556
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
S S D + E GK+ +L LL +L+ +TD+++VLVS YTQTLDL +C
Sbjct: 557 -NALSKTCMSQIKQDNNFNEYCGKVTILQTLLRNLK-KTDEKLVLVSYYTQTLDLLEIIC 614
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
+ +LRLDG+T S R K+ FN + N V LLS+KAGG GLNL G +RLVLFD
Sbjct: 615 DMEKLKFLRLDGSTPSSVRLKITEQFNTRTDNSKVLLLSAKAGGVGLNLPGASRLVLFDS 674
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA+D QA AR+WRDGQK+ V+IYR L+TGTIEEK+YQRQ+SK L + + D +
Sbjct: 675 DWNPASDMQAMARIWRDGQKRNVYIYRLLTTGTIEEKIYQRQISKANLSESV----VDLN 730
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC-TRCQNYDDGAESIGEGDETNSANKNDQ 735
LST +L+DLFT +D S H+ M+C QN +E + E ++T
Sbjct: 731 HLGSLKLSTAELKDLFTLANDTISLTHDLMNCPCSGQNEHLPSEKLREKEQTRD------ 784
Query: 736 SDQEVTDIGGFAGLAGCLHKL--KSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQ---- 789
C L KSS+K L L W H Y +P I+Q
Sbjct: 785 ----------------CQFTLTEKSSQKNLTI---NQLQGWQH--YKQPIPSDIMQDIML 823
Query: 790 ASAGDEVTFVFTNQVDGK 807
D +TF+F N + K
Sbjct: 824 TERSDNITFIFKNSIMQK 841
>gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1000
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 266/699 (38%), Positives = 371/699 (53%), Gaps = 66/699 (9%)
Query: 73 LPRVLSVTEGAAVCRKPFKPPCS--NGYDNG-----NDQLARRLCARKRFVPWGSSRPVL 125
+ R+ S R P K +G D G N + + L + F VL
Sbjct: 225 ISRISSAMSTNGTIRLPSKTKIKREHGDDGGAKKLLNAAVPKSLAMKSAFKNPMKESTVL 284
Query: 126 VTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLR 185
V N +PR N +LP V V+ +PE G +V + +DPLL + LR
Sbjct: 285 VRKPNGKPIPR--------HNPSLPGAV---VMRRPESVPK-GKEIVDVVLDPLLGKHLR 332
Query: 186 PHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMV 243
HQREGV+F++ECV G+ + G G ILAD+MGLGKTLQ+IAL++TLL Q ++ P++
Sbjct: 333 EHQREGVRFLYECVMGMRSFNG-EGAILADEMGLGKTLQTIALIWTLLKQNPIYEAPPVI 391
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
KKA+IV P +L+ NW+ E +KW+G + + ++ R + + FT S V+I+
Sbjct: 392 KKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKR----TRLTDFT-MGQSYSVMIIG 446
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKN--------DQTLTN-----------RNDLE 344
YE R + S D++I DE HR++ QTL +NDL
Sbjct: 447 YERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQTLNTSKRVILSGTPIQNDLT 506
Query: 345 EFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFIL 404
EFFAMV+F NPGILG F + +E I+ ++P A + + + G RS EL++ + FIL
Sbjct: 507 EFFAMVDFVNPGILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKARSEELASLTSLFIL 566
Query: 405 RRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITAL 464
RRT LLSN+LPPK V+ C T Q+ +Y H + S + A+ L IT L
Sbjct: 567 RRTADLLSNYLPPKTEYVLFCNPTSSQANIYRHVLSSPVFQCALGNS---DSALQLITIL 623
Query: 465 KKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVL 524
KKLCN P L+ KS + +T + P + R + SGK+ VL
Sbjct: 624 KKLCNSPSLL--NPKSSDEDSTSTLSSLVASLPSSITRRLTPAS---------SGKIRVL 672
Query: 525 ARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND 584
+LL ++R T +++VL+SNYT TLDL +L P+LRLDG+T +KRQ LV+ FN
Sbjct: 673 DQLLHNIRHTTSEKVVLISNYTSTLDLLGKLLTSLSLPFLRLDGSTPAAKRQALVDDFNR 732
Query: 585 PSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
S F FLLS+KAGG GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IYR
Sbjct: 733 SSPTSVFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYR 792
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
FL G +EEK++QRQ++K GL + ++ S Q S E+LRDLF + + H
Sbjct: 793 FLLKGALEEKIWQRQVTKIGLADSVMDQK--SGVLQ---FSREELRDLFRLDEGATCQTH 847
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTD 742
+ + C S G +K+D S+ E TD
Sbjct: 848 DLLGCECGGRGGQETSSHPNGSHIIDISKSDHSESESTD 886
>gi|449296175|gb|EMC92195.1| hypothetical protein BAUCODRAFT_569497 [Baudoinia compniacensis
UAMH 10762]
Length = 965
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/564 (41%), Positives = 323/564 (57%), Gaps = 50/564 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP+L + LR HQR GV F++ECV G+ G G ILAD+MGLGKTLQ+IA
Sbjct: 264 GKQIVDVVVDPILTKSLREHQRAGVAFLYECVMGMKQYDG-EGAILADEMGLGKTLQTIA 322
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q + P++KKA+IV P +L++NW E KW+G + + ES + +
Sbjct: 323 LVWTLLKQNPVYQDAPVIKKALIVCPVTLINNWRKEFTKWLGKERVGVFVAESKK----T 378
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------ 339
+ FT S V+I+ YE RM D++I DE HRLK Q +
Sbjct: 379 RLTDFT-MGRSYSVMIIGYEKLRMVQEDLQKGSGIDIVIADEGHRLKTAQNKSALAIRSL 437
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL EFF MV+F NPG+L + F+R +E I+ R+P A+ ++ +
Sbjct: 438 KTDRRIILSGTPIQNDLAEFFTMVDFVNPGLLNKYSVFKREFENPILKSRQPGASAKDVE 497
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ FILRRT +LS +LPPK VV C+ T Q+ +Y I S
Sbjct: 498 KGEARSEELAKLTGMFILRRTAEILSKYLPPKTEYVVFCRPTEAQALVYRAIIGSPTFNA 557
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A+ + L I LKK+CN P L+ ++ G+ G +D + PE+
Sbjct: 558 ALGSS---AVTLELINILKKVCNSPTLL---LRKGDKG----DDATK---PELLGCVPSG 604
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
GA SGK+ VL LL +R T++++VLVSNYT T+D+ L Y YLRL
Sbjct: 605 LLRTPGA----SGKLQVLDSLLHRIRTTTEEKVVLVSNYTATMDILGNLLSSLSYRYLRL 660
Query: 567 DGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T KRQ+LV+ FN P N FVFLLS+KAGG GLNLIG +RL+LFD DWNPA D Q
Sbjct: 661 DGSTPAGKRQELVDRFNRSPPSNSFVFLLSAKAGGVGLNLIGASRLILFDLDWNPATDLQ 720
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A ARV RDGQK+ FIYR ++ G ++EK++QRQ+SK GL I ++ S +
Sbjct: 721 AMARVHRDGQKRPCFIYRLVTQGALDEKIFQRQVSKTGLADSIVDGKSGVSG-----FTR 775
Query: 686 EDLRDLFTFHDDVRSEIHENMHCT 709
E+LRDLF+ +D+ + H+ + C+
Sbjct: 776 EELRDLFSLDEDLDCQTHKLLGCS 799
>gi|405951944|gb|EKC19810.1| DNA repair and recombination protein RAD54-like protein
[Crassostrea gigas]
Length = 564
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/450 (48%), Positives = 283/450 (62%), Gaps = 39/450 (8%)
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------ 340
+LI+SYETFR+HS+ E L+ICDE HRLKN + T +
Sbjct: 92 ILIISYETFRLHSTVMHKGE-VGLVICDEGHRLKNSENQTYQALNGMRARRRVLLSGTPI 150
Query: 341 -NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
NDL E+F++V+F N GILG A F++ +ET I+ GR+ AT+E+ K G E+ EL+ V
Sbjct: 151 QNDLLEYFSLVHFVNGGILGTAQEFKKRFETPILRGRDADATDEDHKKGQEKLLELADVV 210
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
N+ I+RRT ALL+ +LP K+ +VVCC+LT QSELY + SK + + ++ K S L+
Sbjct: 211 NRCIIRRTQALLTKYLPVKVEQVVCCRLTQTQSELYKLLVRSKGFE--VEQDEKTSTTLS 268
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+IT LKKLCNHP LIY+ PG G D FPP + ELSG
Sbjct: 269 FITQLKKLCNHPDLIYEKCLQRAPGYDGTLD---LFPPNHTTKIVRP---------ELSG 316
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
K+ VL RLL ++ +T D++VLVSNYTQTLDLF LC +RRY Y+RLDG+ +I KR K+V
Sbjct: 317 KVLVLDRLLALIKAQTSDKVVLVSNYTQTLDLFETLCHQRRYLYVRLDGSMTIKKRAKVV 376
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN+PS EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA AR WRDGQKK+
Sbjct: 377 EQFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARCWRDGQKKQC 436
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
FIYR ++TGTIEEK++QRQ K+ L + ++ D S E LRDLF +D
Sbjct: 437 FIYRLIATGTIEEKIFQRQTHKKALSSCVVDKEEDVE----RHFSREQLRDLFKLKEDTS 492
Query: 700 SEIHENMHCTRCQNYDDGAESIGEGDETNS 729
S+ H+ C RC N EG +TNS
Sbjct: 493 SDTHDTFKCKRCVN-SIQVRGPPEGSDTNS 521
>gi|452845972|gb|EME47905.1| hypothetical protein DOTSEDRAFT_102471, partial [Dothistroma
septosporum NZE10]
Length = 834
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 245/598 (40%), Positives = 341/598 (57%), Gaps = 56/598 (9%)
Query: 136 RTVENNV-IEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQF 194
R V NNV + + P + LV+ +P+ G +V + VDP+L R LR HQREGV F
Sbjct: 143 RPVNNNVEVPKPRFSPNAENALVMRRPDSAPK-GKQIVDVVVDPILSRELRKHQREGVAF 201
Query: 195 MFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPT 252
++ECV G+ + G G ILAD+MGLGKTLQ+IAL++TLL Q + G+P+V KA++V P
Sbjct: 202 LYECVMGMKDYDG-EGAILADEMGLGKTLQTIALIWTLLKQTPFWKGQPIVSKALVVCPV 260
Query: 253 SLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF-RMH 310
+L+ NW+ E +KW+G R +S S + FT SS V+I+ YE ++
Sbjct: 261 TLIRNWQKEFRKWLGDYRCGCFIPGDSN-----SSLAPFTQKLSSNPVMIIGYEKLTKIK 315
Query: 311 SSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVN 351
+C DL+ICDE HRLK + +NDLEEF+ MV+
Sbjct: 316 DQLKNCK--IDLIICDEGHRLKTAKNKAAAAIKEIGTQRRVILSGTPIQNDLEEFYQMVD 373
Query: 352 FTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALL 411
F NP I+ + F+R +E I+ R+P A+ + + G RS EL+ + FILRRT+ +L
Sbjct: 374 FVNPSIMSKYSTFKREFEIPIVRMRQPEASASDVEKGEARSEELANRTGMFILRRTSEIL 433
Query: 412 SNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHP 471
S +LPPK VV C+ T +Q+++Y + ++ A++ T +L I LKK+CN P
Sbjct: 434 SQYLPPKTEYVVLCRPTEVQADIYRTMVGTQAFIAAMNTPTA---VLELINVLKKVCNCP 490
Query: 472 KLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL 531
+L+ T S G T PE+ G S GA SGK+ VL LL +
Sbjct: 491 RLLL-TNDSKKEGVT---------KPELLEGISPRLLKSPGA----SGKLQVLDELLHQI 536
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEF 590
TD+++VLVSNYT T+D+ A L Y YLRLDGTT SKRQ LV+ FN P N F
Sbjct: 537 NSTTDEKVVLVSNYTSTMDILANLLDSMSYKYLRLDGTTPQSKRQDLVDRFNRSPKTNSF 596
Query: 591 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 650
VFLLS+KAGG GLNL G +RL++FD DWNP+ D QA ARV RDGQ + IYR L+ G +
Sbjct: 597 VFLLSAKAGGVGLNLTGASRLIMFDLDWNPSTDLQAMARVHRDGQTRPCHIYRLLTQGAL 656
Query: 651 EEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+EK++QRQ+SK GL I ++ +S + +LRDLFT + + H + C
Sbjct: 657 DEKIFQRQVSKTGLADAIVDGKSGASG-----FTQAELRDLFTLDEGEDCQTHRLLGC 709
>gi|388582651|gb|EIM22955.1| hypothetical protein WALSEDRAFT_67840 [Wallemia sebi CBS 633.66]
Length = 916
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/664 (37%), Positives = 361/664 (54%), Gaps = 61/664 (9%)
Query: 78 SVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRT 137
S A KP+KPP N + A + + +TN PR
Sbjct: 118 SFYTSVAASAKPYKPPTINRTLESTSKPASSHLEHDNLNQHSVTTSSSLAVTN----PRV 173
Query: 138 VENNVIEENFTLPPGV--DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFM 195
+ + + + P + P+ + + LV + +DP + LRPHQREGV+FM
Sbjct: 174 IPTPISKFDPNAPDALVMPPISTYVANKLNPKQFPLVDVVLDPHISSKLRPHQREGVKFM 233
Query: 196 FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTS 253
+E V G+ G +GCILAD+MGLGKTLQ IAL++TLL Q + P++ KA+IV P S
Sbjct: 234 YEAVMGMRGHKG-NGCILADEMGLGKTLQVIALIWTLLKQNPVTNSGPVIGKAMIVCPVS 292
Query: 254 LVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSS- 312
LV+NW+ E KW+G I + +D V+ I F QVLI+ YE R +
Sbjct: 293 LVNNWKKEFSKWIGQ--SKIGIFVGDKD--VTEIKKFQQ-SRIHQVLIIGYEKLRTAAEV 347
Query: 313 -KFSCSESCDLLICDEAHRLKNDQTLTN------------------RNDLEEFFAMVNFT 353
KF C L++CDE HRLK+ + +NDL E++ M F
Sbjct: 348 LKF-CQPQIGLIVCDEGHRLKSSNKTSQVFEAFPTRRRIILSGTPIQNDLGEYYCMTEFC 406
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
NPG+L A F++ YET I+ R P ++ + ++G +RS LSA +QF+LRRT +L N
Sbjct: 407 NPGLLDTYASFKKKYETPIMRSRAPNCSKGDLEIGRQRSEGLSALNDQFVLRRTADILVN 466
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKL 473
LPPK VV T LQ LY + + V++ + + + Q LA I L+ LCN P +
Sbjct: 467 VLPPKTEFVVFIAPTKLQLRLYQQLVQTSIVQKVLDKLSGQH--LALIGILRNLCNSPGI 524
Query: 474 IYDTIKSGNPGTTG---FEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
+Y+ +++ + T F+ C FP P F+ LSGK+ L R
Sbjct: 525 LYNIMQNNSTDTHKEFKFDSCKELFPVNVNPNDFN---------------LSGKLKALGR 569
Query: 527 LLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DP 585
LL L+ +T++++++VSN+T TL+L CR +Y + RLDG+T +KRQ++V+ FN P
Sbjct: 570 LLKTLKNQTEEKVIVVSNFTTTLNLIETHCRVNKYKFCRLDGSTQQAKRQEIVDSFNRSP 629
Query: 586 SKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFL 645
+F+FLLS+K+GG GLNLIG +RL+LF+ DWNP+ND QA AR+ RDGQ + VFIYRFL
Sbjct: 630 QAGKFIFLLSTKSGGVGLNLIGASRLILFESDWNPSNDLQAMARIHRDGQTRPVFIYRFL 689
Query: 646 STGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHEN 705
+TGTI+EK++QRQ++K GL + + +F + E+LR LF DD H+
Sbjct: 690 TTGTIDEKIFQRQLTKIGLSNSLMGNTVEKKNETDSF-TIEELRALFKVDDDTICGTHDL 748
Query: 706 MHCT 709
+ C+
Sbjct: 749 LDCS 752
>gi|384252387|gb|EIE25863.1| hypothetical protein COCSUDRAFT_64873 [Coccomyxa subellipsoidea
C-169]
Length = 685
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 246/603 (40%), Positives = 343/603 (56%), Gaps = 61/603 (10%)
Query: 150 PPGVDPLVL----WQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
P +D LVL WQ + Q + P+ VDP L R LRPHQREG+QF++ECV GL
Sbjct: 15 PHALDALVLNMQQWQGGKVQG----VAPVVVDPYLGRHLRPHQREGLQFLYECVMGL-RE 69
Query: 206 AGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 265
+G G +LADDMGLGKTLQ I+L++TLL QG GKP VK+ I+VTP SL NW EIKKW
Sbjct: 70 SGRFGAVLADDMGLGKTLQVISLIWTLLRQGPSGKPAVKRVIVVTPCSLTQNWADEIKKW 129
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
+G ++ AL + + F + +V++ SYET R H+ + DLL+C
Sbjct: 130 LGNE-RIKALVLQAGPEAKGQVLDF-KAGNVWKVMVASYETLRKHTDALA--GCVDLLVC 185
Query: 326 DEAHRLK---NDQTLTN-----------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DE HRLK +T++ +N+L+EFFA++NF NP +LG FR
Sbjct: 186 DEGHRLKAAAGSKTISALLALRCPRRILVTGTPLQNNLDEFFALINFVNPDLLGSMGTFR 245
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
R + I R+ +T EE LG +RS+ELS +V+ F+LRRT + + +LPP VV C
Sbjct: 246 RIFGDPISRSRDRDSTPEEVALGHQRSAELSRRVDAFMLRRTKEINAAYLPPLHSFVVFC 305
Query: 426 KLTPLQSELYNHFIHSKNVKRAISEE--TKQSKILAYITALKKLCNHPKLIY--DTIKSG 481
+PLQ LY + S V ++ + L+ I A++KLCNHP +++ D +++
Sbjct: 306 PPSPLQVALYKQLVRSNMVTSLLTSAGGCSEGSALSCIMAMRKLCNHPDMLFVGDDMEAA 365
Query: 482 NPGTTGFE-DCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGH-LRQRTDDRI 539
G E D +P G+ + SGKM VL LL H L + +R+
Sbjct: 366 -----GLEADLHPLYPAGYQLGQP-----------QHSGKMQVLEGLLAHVLGGKAGERV 409
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
V+VSN T+TLD + +C RR+ +R+ G + +KRQ +V FN + + V LLS+KAG
Sbjct: 410 VVVSNSTKTLDRVSAVCDSRRWTTVRICGDVNAAKRQDIVTAFNRHNVGQ-VLLLSAKAG 468
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
G GLNLIG NRLVLFD DWNPA D QA AR+WRDGQ K IYR L+TG I+EK+YQRQ+
Sbjct: 469 GAGLNLIGANRLVLFDTDWNPATDLQAMARIWRDGQTKPCTIYRLLTTGAIDEKMYQRQL 528
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM-HCTRCQNYDDGA 718
K L ++Q +S +G + E+LR LF+ + E M + Q++ D
Sbjct: 529 MKGELADAMEQ----ASKQKGPSFTREELRALFSLNTSTSCETAVIMRNSASAQDWLDVK 584
Query: 719 ESI 721
+S+
Sbjct: 585 DSL 587
>gi|154276746|ref|XP_001539218.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414291|gb|EDN09656.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 959
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/594 (39%), Positives = 330/594 (55%), Gaps = 50/594 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DPLL + LR HQREGV+F++ECV G+ + G G ILAD+MGLGKTLQ+IA
Sbjct: 285 GKQIVDVVLDPLLAKHLREHQREGVKFLYECVMGMRSFNG-EGAILADEMGLGKTLQTIA 343
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q ++ +P+VKKA+IV P +L+ NW E +KW+G + + ++ R +
Sbjct: 344 LIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERVGVFVADTKR----T 399
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT S V+I+ YE R + S D++I DE HR++ Q + +
Sbjct: 400 RLTDFTM-GKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSL 458
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL EFFAMV+F NPG+LG F + +E I+ R+P A E++ +
Sbjct: 459 NTSKRIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIE 518
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS ELS + FILRRT +L +LPPK V+ C T Q +Y+H + S +
Sbjct: 519 KGEARSEELSNLTSLFILRRTADILLKYLPPKTEYVLLCNPTSSQKNIYHHVLSSPIFQC 578
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A+ L IT LKKLCN P L+ P +T I PP + S +
Sbjct: 579 ALGN---SESALQLITILKKLCNSPSLLKPRNSDQTPNST-LGALISSLPPTVLRYLSPA 634
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK+ VL +LL ++R T +++VL+SNYT TLDL A P+LRL
Sbjct: 635 S----------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRL 684
Query: 567 DGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T SKRQ LV+ FN S + F FLLS+KAGG GLNLIG +RL+LFD DWNPA D Q
Sbjct: 685 DGSTPPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQ 744
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+ RDGQK+ +YR + G +EEK++QRQ++K GL + ++T S S
Sbjct: 745 AMARIHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQ-----FSR 799
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQE 739
E+L+DLF + + HE + CQ G I + D + D D E
Sbjct: 800 EELKDLFRLDEGTTCQTHELIG---CQCGGRGKLDISKSDNQTEVSDVDSEDNE 850
>gi|345488256|ref|XP_001601964.2| PREDICTED: DNA repair and recombination protein RAD54B [Nasonia
vitripennis]
Length = 898
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 252/661 (38%), Positives = 358/661 (54%), Gaps = 76/661 (11%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
ND + ++VD L LRPHQREG+ F+++C+ G+ N+A G ILAD+MGLGKTLQ
Sbjct: 290 NDDKKIHEVSVDGCLASVLRPHQREGIVFLYKCIMGM-NSAHHKGAILADEMGLGKTLQC 348
Query: 226 IALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
I+L++TLL +G GKP++K+ +IV+P+SL NW E K+W+G + E +
Sbjct: 349 ISLIWTLLKKGPSGKPVLKRVLIVSPSSLCGNWNKEFKRWLGTMKIAPYVVEGKQK---- 404
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT + V+I+ YE F + + + + DLLICDE HRLKN + T +
Sbjct: 405 -VKDFTKTPRAC-VMIIGYEMFVRNIDDIN-NLNFDLLICDEGHRLKNSEVKTLKFLSQL 461
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL EF+ + NF NPG+ G ++ YYE I+ + TA E+E
Sbjct: 462 RCKRRILVTGTPVQNDLTEFYNLANFVNPGVFGTPGDYKSYYEHKIVASQRATADEDEVA 521
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
LG ER+ EL K FILRRTN L++ +LP K VV CK T Q+ LY+ I R
Sbjct: 522 LGQERAKELYEKSKSFILRRTNTLINKYLPQKHELVVFCKPTVEQNNLYS-LITDYWFNR 580
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
++ + L ITALKK+CNHP L + D + P S + S
Sbjct: 581 SLIDGNVIP--LTVITALKKVCNHPYLF-------TSEKSNILDEVLPSVPTNLSAINTS 631
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
++ S K+ V+ + ++ RT++++VLVS +TQTLD ++C + RL
Sbjct: 632 YS--------YSSKVKVVQAIFQAIK-RTNEKVVLVSYFTQTLDFLEKVCCTEGLQFCRL 682
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG T + R KLV+ FN N F FLLS+KAGG GLNL+G +RL+LFD DWNPAND QA
Sbjct: 683 DGHTPAASRTKLVDRFNSKD-NSFFFLLSAKAGGVGLNLVGASRLILFDSDWNPANDAQA 741
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
AR+WRDGQK+ VFIYR L+TGTIEEK+YQRQ+SK GL + + D++ LS
Sbjct: 742 MARIWRDGQKRSVFIYRLLTTGTIEEKIYQRQISKTGLSEAV----VDANHISSLKLSAS 797
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGF 746
+L+DLFT S H+ M C+ C G I +E NSA+++ +
Sbjct: 798 ELKDLFTLDSQTSSVTHDLMDCS-CT----GCGDIPYKNEENSASEDARD---------- 842
Query: 747 AGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPD---AILQASAGDEVTFVFTNQ 803
C LK + + + + L +W H+ PD ++ + +TF+F N
Sbjct: 843 -----CQFDLKKKQPKQQISMNQ-LLSW-QHYKQPICPDLMKELMIQQVQNHITFIFKNS 895
Query: 804 V 804
V
Sbjct: 896 V 896
>gi|452985646|gb|EME85402.1| hypothetical protein MYCFIDRAFT_213848 [Pseudocercospora fijiensis
CIRAD86]
Length = 966
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/610 (39%), Positives = 339/610 (55%), Gaps = 68/610 (11%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDPLL + LR HQREGV F++ECV G+ + G G ILAD+MGLGKTLQ+IA
Sbjct: 270 GRQIVDVVVDPLLTKHLREHQREGVAFLYECVMGMKDYDG-EGAILADEMGLGKTLQTIA 328
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVV 284
LL+TLL Q F+ P++KKA+IV P SL+ NW E +KW+G R+ + DD
Sbjct: 329 LLWTLLKQNPVFEDAPVIKKALIVCPVSLIKNWRNEFRKWLGSERIGVFVA-----DDNK 383
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
+ FT + V+I+ YE + D++ICDE HRLK T +N+
Sbjct: 384 MRLTDFTK-GRAYHVMIIGYEKLTKVKDQLQGGTGIDIVICDEGHRLK---TASNKAAGA 439
Query: 341 ------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATE 382
NDL EF+ MV+F NP I+ F++ +ET I+ R+P A++
Sbjct: 440 IKSLNTDRRIILSGTPIQNDLSEFYTMVDFVNPNIMSKYTTFKKEFETPILKSRQPGASQ 499
Query: 383 EEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK 442
+ + G RS++L+ +FILRRT +L+ +LPPK VV C+ T Q +Y + S+
Sbjct: 500 SDLEKGEARSAQLADLTGKFILRRTAEILNKYLPPKTEYVVFCRPTEAQKTVYRMIVSSQ 559
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG---FEDCIRFFPPEM 499
A++ ++ +L I LKK+CN P L+ + T FED P+
Sbjct: 560 AFMAAMN---TKAVVLELIMILKKVCNSPNLLIQKTGDKDEQTKRSDLFEDV-----PKH 611
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
G +GS SGK+ V LL + TD+++V+VSNYT T+D+ +L
Sbjct: 612 LLGSAGS-----------SGKLQVFDSLLHQIHTHTDEKVVVVSNYTSTMDVLGRLLTSM 660
Query: 560 RYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
+LRLDG+T +KRQ++V+HFN P K FV LLS+KAGG GLNLIG +RLV+FD DW
Sbjct: 661 DMSFLRLDGSTPTNKRQEIVDHFNRWPRKKAFVLLLSAKAGGVGLNLIGASRLVMFDMDW 720
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D QA ARV RDGQK+ FIYR L+ G ++EK++QRQ+SK GL I D A
Sbjct: 721 NPATDLQAMARVHRDGQKRPCFIYRLLTQGALDEKIFQRQVSKVGLADSI----VDGKAA 776
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCT---RCQNYDDGAESIGEGDETNSANKNDQ 735
F E LRDLFT + + H+ + C+ Q D +ES E D + + D+
Sbjct: 777 ASGFTQAE-LRDLFTLDEGEDCQTHKLLGCSCGGNGQPVADVSES--EVDSEQTFTELDE 833
Query: 736 SDQEVTDIGG 745
+ EV + G
Sbjct: 834 NGVEVWRMDG 843
>gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 974
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 236/594 (39%), Positives = 333/594 (56%), Gaps = 50/594 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DPLL + LR HQREGV+F++ECV G+ + G G ILAD+MGLGKTLQ+IA
Sbjct: 300 GKQIVDVVLDPLLAKHLREHQREGVKFLYECVMGMRSFNG-EGAILADEMGLGKTLQTIA 358
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q ++ +P+VKKA+IV P +L+ NW+ E +KW+G + + ++ R +
Sbjct: 359 LIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWKKEFRKWLGNERVGVFVADAKR----T 414
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT S V+I+ YE R + S D++I DE HR++ Q + +
Sbjct: 415 RLTDFT-MGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSL 473
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL EFFAMV+F NPG+LG F + +E I+ R+P A E++ +
Sbjct: 474 NTSKRIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIE 533
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ + FILRRT +L +LPPK V+ C T Q +Y++ + S +
Sbjct: 534 KGEARSEELTNLTSLFILRRTADILLKYLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQC 593
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A+ L IT LKKLCN P L+ P +T I PP + S +
Sbjct: 594 ALGN---SESALQLITILKKLCNSPSLLKPRNSDQTPNST-LGALISSLPPTVLRHLSPA 649
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK+ VL +LL ++R T +++VL+SNYT TLDL A P+LRL
Sbjct: 650 S----------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRL 699
Query: 567 DGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T SKRQ LV+ FN S + F FLLS+KAGG GLNLIG +RL+LFD DWNPA D Q
Sbjct: 700 DGSTPPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQ 759
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+ RDGQK+ +YR + G +EEK++QRQ++K GL + ++T S S
Sbjct: 760 AMARIHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQ-----FSR 814
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQE 739
E+LRDLF + + HE + CQ G I + D+ + + D D E
Sbjct: 815 EELRDLFRLDEGTTCQTHELIG---CQCGGRGELDISKSDKQSEVSDVDSEDSE 865
>gi|154316345|ref|XP_001557494.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10]
Length = 917
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 239/617 (38%), Positives = 341/617 (55%), Gaps = 58/617 (9%)
Query: 151 PGVDPLVLWQPEEPQ--NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
P V ++ Q P+ G +V + VDP L R LR HQ+EGV+F++ECV G + G
Sbjct: 225 PSVPGAIVMQRPNPKYVAKGKQVVDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNG- 283
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQG----FDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G ILAD+MGLGKTLQ+IALL+TLL Q +G ++KKA+IV P +L+SNW+AE K
Sbjct: 284 QGAILADEMGLGKTLQTIALLWTLLKQNPEHPHEGG-VIKKALIVCPVTLISNWKAEFNK 342
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W+G + + + +++ ++ FT S V+I+ YE R + D+++
Sbjct: 343 WLGNERIGVFVADGSKNIRLT---DFTH-GKSYSVMIIGYEKLRTVQEELKKGSGIDIVV 398
Query: 325 CDEAHRLK-----NDQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DE HRLK + Q + N +NDL EFF MV+F NPG+L F+
Sbjct: 399 ADEGHRLKTAANKSAQAIKNLNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFK 458
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ +E I+ R+P ATE + + G R EL+ FILRR ++L+ +L PK V+ C
Sbjct: 459 KCFEAPILKSRQPGATESDMEKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFC 518
Query: 426 KLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT 485
K T Q+E+Y H + S R + L IT LKK+CN P L+ + P
Sbjct: 519 KPTQAQAEVYQHVLASPVFGRVLGSSEAS---LQLITMLKKVCNAPSLLVKKSDTDTPSN 575
Query: 486 TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNY 545
+ + PPE+ V S K VL R+L L + T ++IV+VSNY
Sbjct: 576 SNVAQLLESIPPEILKKNP----------VVASSKFRVLNRMLMRLSKSTTEKIVIVSNY 625
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLN 604
T TLDL P+LRLDG+T +KRQ LVN FN P+ F FLLS+K+GG G+N
Sbjct: 626 TSTLDLLVSHLSSLNLPFLRLDGSTPQAKRQDLVNTFNKTPASKYFAFLLSAKSGGAGIN 685
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG +RLVLFD DWNPA D QA AR+ RDGQK+ V IYRFL +G ++EK+YQRQ++K GL
Sbjct: 686 LIGASRLVLFDVDWNPATDLQAMARIHRDGQKRPVKIYRFLMSGGMDEKIYQRQVTKMGL 745
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEG 724
+ D + +F S ++LRDLF + + + HE + C D G +G
Sbjct: 746 ADSVM----DGKKNEASF-SADELRDLFRLDVNAQCQTHELLGC------DCGG--VGRE 792
Query: 725 DETNSANKNDQSDQEVT 741
+ SA++ + ++E++
Sbjct: 793 EPVVSASEMPEPNKEIS 809
>gi|347828015|emb|CCD43712.1| hypothetical protein [Botryotinia fuckeliana]
Length = 962
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 239/617 (38%), Positives = 341/617 (55%), Gaps = 58/617 (9%)
Query: 151 PGVDPLVLWQPEEPQ--NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
P V ++ Q P+ G +V + VDP L R LR HQ+EGV+F++ECV G + G
Sbjct: 270 PSVPGAIVMQRPNPKYVAKGKQVVDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNG- 328
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQG----FDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
G ILAD+MGLGKTLQ+IALL+TLL Q +G ++KKA+IV P +L+SNW+AE K
Sbjct: 329 QGAILADEMGLGKTLQTIALLWTLLKQNPEHPHEGG-VIKKALIVCPVTLISNWKAEFNK 387
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W+G + + + +++ ++ FT S V+I+ YE R + D+++
Sbjct: 388 WLGNERIGVFVADGSKNIRLT---DFTH-GKSYSVMIIGYEKLRTVQEELKKGSGIDIVV 443
Query: 325 CDEAHRLK-----NDQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DE HRLK + Q + N +NDL EFF MV+F NPG+L F+
Sbjct: 444 ADEGHRLKTAANKSAQAIKNLNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFK 503
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ +E I+ R+P ATE + + G R EL+ FILRR ++L+ +L PK V+ C
Sbjct: 504 KCFEAPILKSRQPGATESDMEKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFC 563
Query: 426 KLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT 485
K T Q+E+Y H + S R + L IT LKK+CN P L+ + P
Sbjct: 564 KPTQAQAEVYQHVLASPVFGRVLGSSEAS---LQLITMLKKVCNAPSLLVKKSDTDTPSN 620
Query: 486 TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNY 545
+ + PPE+ V S K VL R+L L + T ++IV+VSNY
Sbjct: 621 SNVAQLLESIPPEILKKNP----------VVASSKFRVLNRMLMRLSKSTTEKIVIVSNY 670
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLN 604
T TLDL P+LRLDG+T +KRQ LVN FN P+ F FLLS+K+GG G+N
Sbjct: 671 TSTLDLLVSHLSSLNLPFLRLDGSTPQAKRQDLVNTFNKTPASKYFAFLLSAKSGGAGIN 730
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG +RLVLFD DWNPA D QA AR+ RDGQK+ V IYRFL +G ++EK+YQRQ++K GL
Sbjct: 731 LIGASRLVLFDVDWNPATDLQAMARIHRDGQKRPVKIYRFLMSGGMDEKIYQRQVTKMGL 790
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEG 724
+ D + +F S ++LRDLF + + + HE + C D G +G
Sbjct: 791 ADSVM----DGKKNEASF-SADELRDLFRLDVNAQCQTHELLGC------DCGG--VGRE 837
Query: 725 DETNSANKNDQSDQEVT 741
+ SA++ + ++E++
Sbjct: 838 EPVVSASEMPEPNKEIS 854
>gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143]
gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88]
Length = 974
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 236/594 (39%), Positives = 332/594 (55%), Gaps = 50/594 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DPLL + LR HQREGV+F++ECV G+ + G G ILAD+MGLGKTLQ+IA
Sbjct: 300 GKQIVDVVLDPLLAKHLREHQREGVKFLYECVMGMRSFNG-EGAILADEMGLGKTLQTIA 358
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q ++ +P+VKKA+IV P +L+ NW E +KW+G + + ++ R +
Sbjct: 359 LIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERVGVFVADAKR----T 414
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT S V+I+ YE R + S D++I DE HR++ Q + +
Sbjct: 415 RLTDFT-MGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSL 473
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL EFFAMV+F NPG+LG F + +E I+ R+P A E++ +
Sbjct: 474 NTSKRIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIE 533
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ + FILRRT +L +LPPK V+ C T Q +Y++ + S +
Sbjct: 534 KGEARSEELTNLTSLFILRRTADILLKYLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQC 593
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A+ L IT LKKLCN P L+ P +T I PP + S +
Sbjct: 594 ALGN---SESALQLITILKKLCNSPSLLKPRNSDQTPNST-LGALISSLPPTVLRHLSPA 649
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK+ VL +LL ++R T +++VL+SNYT TLDL A P+LRL
Sbjct: 650 S----------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRL 699
Query: 567 DGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T SKRQ LV+ FN S + F FLLS+KAGG GLNLIG +RL+LFD DWNPA D Q
Sbjct: 700 DGSTPPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQ 759
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+ RDGQK+ +YR + G +EEK++QRQ++K GL + ++T S S
Sbjct: 760 AMARIHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQ-----FSR 814
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQE 739
E+LRDLF + + HE + CQ G I + D+ + + D D E
Sbjct: 815 EELRDLFRLDEGTTCQTHELIG---CQCGGRGELDISKSDKQSEVSDVDSEDSE 865
>gi|378730751|gb|EHY57210.1| DNA repair and recombination protein RAD54B [Exophiala dermatitidis
NIH/UT8656]
Length = 970
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 251/634 (39%), Positives = 348/634 (54%), Gaps = 63/634 (9%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P +V +P+ P G V + +DPLL + LRPHQ+EGVQF++ECV GL G
Sbjct: 254 PNAAGAVVFKRPKHPP-PGRQTVDVVLDPLLGKLLRPHQKEGVQFLYECVMGLREYGG-Q 311
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
GCILADDMGLGKTL +IALL+TLL Q G P+++KA+IV P SL+ NW+ E +KW+G
Sbjct: 312 GCILADDMGLGKTLTTIALLWTLLRQSPVHRGPPVIRKALIVCPVSLIRNWKREFRKWLG 371
Query: 268 G-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
R+ ++ +D + + F QV+I+ Y+ RM + + D++ICD
Sbjct: 372 SDRLGVLEF-----EDQSTHVRDFDG--RVYQVMIIGYDRLRMVADDLAQGHPIDIVICD 424
Query: 327 EAHRLK-----NDQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLK N Q + + +NDL EF+AMVNF N G LG F R
Sbjct: 425 EGHRLKTMKNKNAQAIESLNTRRRIILSGTPIQNDLGEFYAMVNFVNDGCLGSQKGFIRD 484
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+E II R+P A+EEE + G + S EL+ + FILRRT +LS+ LPPK V+ CK
Sbjct: 485 FEKPIIRSRQPDASEEEIERGRDASEELARTTSPFILRRTADILSDFLPPKTEYVLFCKP 544
Query: 428 TPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
T Q+++Y + + S A+ ++ IT LKKLCN P L+ K GN +T
Sbjct: 545 TQAQTKIYRNILKSAMFHSALRSSESAFQL---ITILKKLCNSPALM--NPKYGNEDSTP 599
Query: 488 FEDCIRFFPPEMF-SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
EM G S + LS K+ +L LL +R T++++VL+SNYT
Sbjct: 600 SSSLTTLN--EMLPEGLSKLYHN------SLSCKIRLLDELLQQIRANTNEKVVLISNYT 651
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP-SKNEFVFLLSSKAGGCGLNL 605
TL+L QL PYLRLDG+ + KRQ LV+ FN+ S F FLLS+KAGG GLNL
Sbjct: 652 STLNLIEQLLVNSNLPYLRLDGSIAAKKRQGLVDQFNNSKSTQSFAFLLSAKAGGVGLNL 711
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
IG +RL+LFD DWNPA D QA AR+ R GQK+ IYRFL G IEE+++QRQ+ K L
Sbjct: 712 IGASRLILFDVDWNPATDDQAVARIHRQGQKRHCKIYRFLIKGGIEERIWQRQVVKRALA 771
Query: 666 KVIQQEQTDSSA---------TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNY-- 714
I Q + +S+ Q S ++L+DLF + H+ + C C+
Sbjct: 772 SSIMQGGSAASSGLAKSSGKGGQITTFSQDELKDLFRLDETDGLRTHDLIECG-CKGLGQ 830
Query: 715 -----DDGAESIGEGDETNSANKNDQSDQEVTDI 743
+S +G E +S + +S+++ DI
Sbjct: 831 KDELVKSSTQSPDDGHENSSLAERSESEEDFPDI 864
>gi|255930267|ref|XP_002556693.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581306|emb|CAP79077.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 978
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/604 (41%), Positives = 336/604 (55%), Gaps = 53/604 (8%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P V LV+ +P+ G +V + VDPLL + LRPHQREGV+F++ECV G+ + G
Sbjct: 250 PKAVGALVMPRPKSVPK-GRQVVDVVVDPLLAKNLRPHQREGVKFLYECVMGMRSFNG-E 307
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
G ILADDMGLGKTLQ+IALL+TLL Q F+ P++KKA+IV P +L++NW E +KW+G
Sbjct: 308 GAILADDMGLGKTLQTIALLWTLLKQNPVFEAPPVIKKALIVCPVTLINNWRKEFRKWLG 367
Query: 268 G-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
R+ + DD + FT + ++IV YE R + S D++I D
Sbjct: 368 NERIGVFVF-----DDKSKRLTDFTK-GRAYSIMIVGYEKLRTVQEALANSSGVDIIIAD 421
Query: 327 EAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLK Q + +NDL EFFA V+ NPGILG F R
Sbjct: 422 EGHRLKTLQNKSGLAIQSLSAVKRVILSGTPIQNDLREFFAAVDLVNPGILGSFKSFIRE 481
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+ET I+ R+P AT ++ + G R EL +QF+LRRT +L+ +LPPK V+ CK
Sbjct: 482 FETPIVRSRQPEATSKDIEKGESRGEELRELTSQFMLRRTADILAKYLPPKTEYVLFCKP 541
Query: 428 TPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
T Q+ +Y + S + A+ L IT LKKL N P L+ P T
Sbjct: 542 TRPQANIYKAVLASPIFQSAMGN---AESALQLITILKKLSNSPSLLTAKNNDDTPNET- 597
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
I P + S S S K+ VL +LL +R +TD++IVLVSNYT
Sbjct: 598 MTALIASIPQPLHRHLSPSS----------SAKIRVLDQLLDTMRSKTDEKIVLVSNYTS 647
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLI 606
TL L A L PYLRLDG+T KRQ LV+ FN P+ + F FLLS+KAGG GLNLI
Sbjct: 648 TLSLLATLLTSLGLPYLRLDGSTPAQKRQGLVDDFNRLPASSCFAFLLSAKAGGTGLNLI 707
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G +RL+LFD DWNPA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++K GL
Sbjct: 708 GASRLILFDVDWNPATDIQAMARIHRDGQKRPCRIYRILLKGSLEEKIWQRQVTKLGLAD 767
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDE 726
+ QE+ SS+ G S +LRDLF +D + HE + C C G + G E
Sbjct: 768 SVMQEK--SSSNGGAQFSVAELRDLFRLDEDRACQTHELLGC-HC-----GGRGVQAGSE 819
Query: 727 TNSA 730
+S
Sbjct: 820 ASSG 823
>gi|395328851|gb|EJF61241.1| hypothetical protein DICSQDRAFT_106351 [Dichomitus squalens
LYAD-421 SS1]
Length = 1088
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 240/611 (39%), Positives = 340/611 (55%), Gaps = 57/611 (9%)
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
+++P+ +DP+L R LRPHQ+EGVQF++ECV GL G GCILAD+MG+GKTLQ+I L+
Sbjct: 378 HVLPVVIDPILARHLRPHQKEGVQFLYECVMGLRKHEG-QGCILADEMGMGKTLQTITLV 436
Query: 230 YTLLCQG-FDGK-PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
+TLL Q + G +V K +IV P SL++NW+ E KW+G I + ++ + +
Sbjct: 437 WTLLKQNPYAGAGSVVGKVLIVCPVSLINNWKTEFHKWLGRDRIGIFTGDKDKNTIKQFL 496
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLK--NDQTLTN----- 339
+S T QVLI+ YE R S + C L+ICDE HRLK N++T T
Sbjct: 497 NSKTH-----QVLIIGYERLRTVISDLAYCQPPIGLIICDEGHRLKSANNKTSTMFDALR 551
Query: 340 ------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
+N+L EF AM +F NPG+L D + F+R YET I+ R P + +E +L
Sbjct: 552 TPRRVILSGTPIQNELSEFHAMADFCNPGLLDDYSTFKRVYETPILKSRAPGCSAKEAEL 611
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G RS++LS F+LRR +L +LPPK VV T LQ ++ + +
Sbjct: 612 GEARSAQLSTIARSFVLRRDATILKKYLPPKHEYVVFVTPTKLQLSIFEKILSHDKLDSL 671
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKS----GNPGT----TGFEDCIRFFPPEM 499
+ T +S LA I L K+ N P L+ T G G E+ ++ P
Sbjct: 672 VRNSTAES--LALINILTKISNSPILLKATADQAKLKGQEGADVKRNAIEEALQLLPER- 728
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
V LSGK+ LA LL LR+ T+++ ++VS+YT TL++ C+ +
Sbjct: 729 ----------AQIEDVSLSGKLSALATLLRALRKHTEEKCIIVSHYTSTLNIIEAYCKTK 778
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSK-NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
Y Y RLDG T KRQ+ VN FN S+ F+FLLSSKAGG GLNLIG +RL L D DW
Sbjct: 779 SYTYHRLDGNTPAPKRQEYVNDFNRSSQAKRFIFLLSSKAGGVGLNLIGASRLCLIDSDW 838
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NP++D Q+ AR+ RDGQK+ V+IYRFL+TG I+EK+YQRQ++K GL + T SS +
Sbjct: 839 NPSHDLQSMARIHRDGQKRPVYIYRFLTTGAIDEKIYQRQVTKLGLSDSLM--GTGSSES 896
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD---DGAESIGEGDETNSANKNDQ 735
+ + + +DL D+FT H H+ + C C+ D + A+ + D A N
Sbjct: 897 KSDSFTRKDLLDIFTIHPHTACNTHDLLDCP-CEASDHITERAQGVNIDDLMEDA-MNSS 954
Query: 736 SDQEVTDIGGF 746
D++ I GF
Sbjct: 955 GDEDEDPIKGF 965
>gi|328711442|ref|XP_001943462.2| PREDICTED: DNA repair and recombination protein RAD54B-like
[Acyrthosiphon pisum]
Length = 842
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 323/560 (57%), Gaps = 47/560 (8%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+ + ++P L + LRPHQ+ G+ F++ECVSG A G ILAD+MGLGKTLQ+I L++
Sbjct: 241 ITSVVLEPFLAKHLRPHQKTGIIFLYECVSGF-KAQECFGAILADEMGLGKTLQTICLVW 299
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGID 288
LL +G + G P+ K+ +IV P+SLV NWE E +W+G R++L ++ + + + +
Sbjct: 300 MLLKRGPYGGIPLAKRVLIVAPSSLVGNWENEFTRWLGRDRLRLFSVDQKKKPSEFARL- 358
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------- 339
P S V+I SYE + + DL++CDE HRLKN+ T T
Sbjct: 359 ----PARSYPVMITSYEMLVRYIEEIE-KLHFDLMVCDEGHRLKNNSTNTYLALTKIECK 413
Query: 340 ----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
+N+L EF+A+++F NPGILG + F+R +E I+ ++P + LG
Sbjct: 414 RRVLLTGTPIQNELAEFYALIDFVNPGILGTYSMFKREFEDKIVESQQPECHPQIISLGK 473
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI-HSKNVKRAI 448
++SEL+ +FILRRT + + +LP K VV C + P+Q LY + + +N +
Sbjct: 474 RKASELNEVTEKFILRRTQDVNNKYLPSKYESVVFCAMAPIQCRLYEETVSYWENRVQEF 533
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
T + IT LKK+CNHP+LI + N TT E +
Sbjct: 534 GLSTISH--FSVITMLKKVCNHPELILNN--RNNSDTT----------EETLNQHLNRTI 579
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
+ +E SGK+ V+ LL L + ++ VL+S YTQTLD+F +LC + Y YLRLDG
Sbjct: 580 TLKHSLIESSGKLIVVDNLLKELHKNGSEKTVLISYYTQTLDIFVKLCDMKHYKYLRLDG 639
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
+T+ ++R +V FN+ + N V LLS+KAGG GLNL+G + L+L+D DWNPA+D+QA A
Sbjct: 640 STATAQRTDIVKKFNNSNSNYSVLLLSAKAGGVGLNLVGASNLILYDSDWNPASDQQAMA 699
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R+WRDGQKK V IYR L++GTIEEK++QRQ+SK GL + I T+ LS E L
Sbjct: 700 RIWRDGQKKNVHIYRLLTSGTIEEKIFQRQISKTGLSEAI----TNPDNQNNTKLSFEQL 755
Query: 689 RDLFTFHDDVRSEIHENMHC 708
+DLF F D H+ + C
Sbjct: 756 KDLFNFKKDALCSTHDLLEC 775
>gi|242778005|ref|XP_002479148.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722767|gb|EED22185.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1037
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/581 (40%), Positives = 324/581 (55%), Gaps = 51/581 (8%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
PG LV+ +P+ G +V + VDP L + LR HQREGV+F++ECV GL + G G
Sbjct: 283 PGA--LVMKRPKTAPK-GQTIVDVVVDPFLTKHLREHQREGVKFLYECVMGLRDYNG-EG 338
Query: 211 CILADDMGLGKTLQSIALLYTLLCQGF--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
ILAD+MGLGKTLQ+I LL+TLL Q F + P+VKKA+IV P +L++NW E +KW+G
Sbjct: 339 AILADEMGLGKTLQTITLLWTLLKQNFIYEAAPVVKKALIVCPVTLINNWRKEFRKWLGN 398
Query: 269 -RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
R+ + DD + FT + V+I+ YE R D++I DE
Sbjct: 399 ERIGVFVF-----DDKRKKLTDFT-MGKAYNVMIIGYEKLRTVQEGLLKGHGIDIVIADE 452
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLK Q + + NDL EFFA V+ NPGILG F + +
Sbjct: 453 GHRLKTVQNKSGQAIQALNTAKRIILSGTPIQNDLSEFFAAVDLVNPGILGTYKNFMKEF 512
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ ++P AT + + G R EL + FILRRT +LS +LPPK V+ C T
Sbjct: 513 EGPIVRSQQPEATIRDIEKGETRGEELRELTSMFILRRTADILSRYLPPKTEYVILCNPT 572
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
+Q+ +Y H + S + A+ + +T LKKLCN P L+ + P +
Sbjct: 573 SVQASIYRHVLGSPIFQTALGN---TEGAFSLLTILKKLCNSPSLL-NAKTDDEPQNSTV 628
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
+ P + S S SGK+ VL +LL +LR T ++IV+VSNYT T
Sbjct: 629 ATLLSTLSPSLRRQFSPSS----------SGKIRVLDQLLHNLRTSTSEKIVIVSNYTST 678
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIG 607
L+L L P+LRLDG+T SKRQ LV+ FN P+ F FLLS+KAGG GLNL G
Sbjct: 679 LNLLGVLLTSLSLPFLRLDGSTPSSKRQSLVDDFNRAPASTCFAFLLSAKAGGTGLNLTG 738
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
+RLVL+D DWNPA D QA AR+ RDGQK+ +IYR + G +EEK++QRQ++K GL
Sbjct: 739 ASRLVLYDVDWNPATDLQAMARIHRDGQKRHCYIYRIMLKGALEEKIWQRQVTKIGLADS 798
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+ + ++ + A S E+L+DLF ++D + HE ++C
Sbjct: 799 VMESKSSNMAQ----FSREELKDLFRLYEDKSCQTHELLNC 835
>gi|212533393|ref|XP_002146853.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
gi|210072217|gb|EEA26306.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
Length = 1054
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/588 (40%), Positives = 330/588 (56%), Gaps = 60/588 (10%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
PG LV+ +P+ G +V + VDP L + LR HQREGV+F++ECV GL + G G
Sbjct: 282 PGA--LVMKRPKTAPK-GQTIVDVVVDPFLSKHLREHQREGVKFLYECVMGLRDYNG-EG 337
Query: 211 CILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
ILAD+MGLGKTLQ+I LL+TLL Q ++ P++KKA+IV P +L++NW E +KW+G
Sbjct: 338 AILADEMGLGKTLQTITLLWTLLKQNPIYEASPVIKKALIVCPVTLINNWRKEFRKWLGN 397
Query: 269 -RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
R+ + DD + FT + ++IV YE R D++I DE
Sbjct: 398 ERIGVFVF-----DDKRKKLTDFTM-GKAYNIMIVGYEKLRTVQDGLLKGHGVDIVIADE 451
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLK Q + + NDL EFFA V+ NPGILG F + +
Sbjct: 452 GHRLKTVQNKSGQAIQALNTAKRIILSGTPIQNDLSEFFAAVDLVNPGILGTYRNFMKEF 511
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ ++P AT + + G R EL + FILRRT +LS +LPPK V+ C T
Sbjct: 512 EGPIVRSQQPEATMRDIEKGEARGEELRELTSMFILRRTADVLSKYLPPKTEYVILCNPT 571
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGN-PGTTG 487
+Q+ +Y H + S + A+ + +T LKKLCN P L+ T K+G+ P
Sbjct: 572 SVQASIYRHVLGSPIFQSALGN---TEGAFSLLTVLKKLCNSPSLL--TAKAGDEPPNAT 626
Query: 488 FEDCIRFFPPEM---FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
E + P + FS S SGK+ VL +LL +L+ T ++IVLVSN
Sbjct: 627 MEALLSTLTPSLRRQFSPSS-------------SGKIRVLDQLLHNLQTTTSEKIVLVSN 673
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGL 603
YT TL+L L P+LRLDG+T +KRQ LV+ FN P+ F FLLS+KAGG GL
Sbjct: 674 YTSTLNLLGILLTSLSLPFLRLDGSTPSAKRQSLVDDFNRAPASKCFAFLLSAKAGGTGL 733
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NL G +RLVLFD DWNPA D QA AR+ RDGQK+ +IYR + G +EEK++QRQ++K G
Sbjct: 734 NLTGASRLVLFDVDWNPATDLQAMARIHRDGQKRHCYIYRIMLKGALEEKIWQRQVTKIG 793
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
L + + ++ + A S E+L+DLF ++ + HE ++C +C
Sbjct: 794 LADSVMESKSSNMAQ----FSREELKDLFRLYEGKSCQTHELLNC-KC 836
>gi|291233872|ref|XP_002736874.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Saccoglossus kowalevskii]
Length = 678
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/624 (38%), Positives = 332/624 (53%), Gaps = 111/624 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LRPHQREGV+FM++CV+G +GCI+AD+MGLGKTLQ I L++TLL Q D
Sbjct: 154 LRPHQREGVKFMWDCVTGR-RIEKSYGCIMADEMGLGKTLQCITLMWTLLKQSPD----- 207
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCS---SLQVL 300
II+ L +NW EI KW+G R+ IA+ ++ D+ + F + +L
Sbjct: 208 --YIIILVFLLENNWYNEISKWLGSRISPIAIDSGSKADIDRNLTHFMTQNGRRIAHPIL 265
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNRNDLEEFFAMVNFTNPGILGD 360
I+SYETFR+H+S + L++CDE HRLKN + T + A+
Sbjct: 266 IISYETFRLHASVLH-KGAVGLVLCDEGHRLKNSENQT-------YLAL----------- 306
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
+ + C R R + Q++L +++LS +LP K+
Sbjct: 307 ---------SGLNCKR--------------RVLLDCCPLTQWLLSSNSSILSKYLPVKVE 343
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS-KILAYITALKKLCNHPKLIYDTIK 479
+VVCC+LT +Q LYN F+ +K + ++ K S L+ IT LKKLCNHP LIY+
Sbjct: 344 QVVCCRLTDVQRALYNGFVSTKAAECQVTSNGKVSMSSLSSITQLKKLCNHPSLIYNKCV 403
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
G GF+ + FP G ELSGKM VL +L R + D++
Sbjct: 404 DGE---EGFDGALDLFPSNF---------NAKGVQPELSGKMQVLDYILAVTRTTSSDKV 451
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAG 599
VLVSNYTQTLDLF +LC R Y Y+RLDG+ SI KR K+V FN+PS E++F+LSSKAG
Sbjct: 452 VLVSNYTQTLDLFEKLCHNRGYLYVRLDGSMSIKKRAKMVERFNNPSSAEYIFMLSSKAG 511
Query: 600 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 659
GCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK+ +IYR LSTGTIEEK++QRQ
Sbjct: 512 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKQCYIYRLLSTGTIEEKIFQRQA 571
Query: 660 SKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAE 719
K+ L + + D S ++L+DLF +++ +S+ H+ C RC N
Sbjct: 572 HKKALSSCVVDNEEDVE----RHFSLDELKDLFKLNENTQSDTHDKFKCRRCVN------ 621
Query: 720 SIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFY 779
++ G+ DL+ W H
Sbjct: 622 -----------------------------------NIQVRPPPDGSDCSNDLSQWNHCPD 646
Query: 780 SMSVPDAILQASAGDEVTFVFTNQ 803
+ D +L++S D ++FVF ++
Sbjct: 647 KKGIIDQVLKSSWCDNISFVFHHR 670
>gi|281209956|gb|EFA84124.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1905
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 246/608 (40%), Positives = 342/608 (56%), Gaps = 58/608 (9%)
Query: 154 DPLVLWQPEEPQND--GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGC 211
D LVL+ P D G + + VDP + + LRPHQR GVQF+++CV+G + G +GC
Sbjct: 830 DALVLYTPPASGLDENGQRVTYVVVDPFISKHLRPHQRRGVQFLYDCVTGQRHQFG-NGC 888
Query: 212 ILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RV 270
ILAD MGLGKT+ ++ L+TLL Q G+P KKAIIVTP LV NW+ EIK+W G R+
Sbjct: 889 ILADQMGLGKTVMTLTTLWTLLKQSPTGQPTCKKAIIVTPAGLVGNWKREIKRWFGAERL 948
Query: 271 QLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHR 330
+ L +S + ++ F + VLI+SY+ R+ SS C+ SC +L+CDE HR
Sbjct: 949 KPFTLNDSVSKNTKQMLEDFNTSTVN-PVLIISYDQCRIFSSIL-CTMSCGVLVCDEGHR 1006
Query: 331 LKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
LKN ++ T + NDL EF++MV+F NPG LG + F++ Y
Sbjct: 1007 LKNMESQTTQSIASIKTKAKIILSGTPIQNDLIEFYSMVDFCNPGSLGTLSQFKKDYANP 1066
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
II GRE + E GI ++ +LS + FILRR + +L +LP K I VV C+L+ Q
Sbjct: 1067 IIRGREDSTKE-----GIAKAMQLSKITSSFILRRKSNVLEEYLPTKTIHVVFCRLSEFQ 1121
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
+LY + + V I+ + L +T LK+LCN+P LI +D
Sbjct: 1122 KKLYRAVLDNNGVDSIIA---GKQNALTTMTTLKQLCNYPSLIKS------------DDY 1166
Query: 492 IRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
++F S + + T D + SGKM + +LL L+ DR VLVSNYTQTLD+
Sbjct: 1167 SKYFTD---SNDTTTPTDFDASQ---SGKMEFVEQLLITLKS-LGDRAVLVSNYTQTLDV 1219
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNR 610
F L ++ R+DG ++RQ V+ FNDPS K VFLLSSKAGG GLNLIG N
Sbjct: 1220 FELLLKKLSIQSYRIDGQVKATERQDRVDKFNDPSNKTHTVFLLSSKAGGVGLNLIGANH 1279
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
+VL+DPDWNPA D QA RVWR+GQ K V IYR L+ GTIEEK++QRQ+ KE L +
Sbjct: 1280 IVLYDPDWNPAIDIQAMERVWREGQTKPVSIYRLLTAGTIEEKIHQRQIIKESLSNSV-- 1337
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
D S + + + E+L+D+F+ +D + E H+ + C +C + S
Sbjct: 1338 --VDKSHYEKSTFTNEELKDIFSLNDTTQCETHDLLTC-KCGIVSGSTTKLNGSSLVASK 1394
Query: 731 NKNDQSDQ 738
K +Q Q
Sbjct: 1395 EKKEQLQQ 1402
>gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus]
Length = 845
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 251/641 (39%), Positives = 347/641 (54%), Gaps = 80/641 (12%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
++VD L LR HQR G+ F++EC+ GL G ILAD+MGLGKTLQ I L++T+L
Sbjct: 253 VSVDFCLTAKLREHQRYGIVFLYECLMGL-KVPDYFGAILADEMGLGKTLQCITLIWTML 311
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI----DS 289
+G GKP+V++ +I+TP SL +NW+ E +KW+G C VV G D
Sbjct: 312 KKGPYGKPIVRRVLIITPRSLCNNWDKEFRKWLG--------CHRISPYVVDGKNRPKDF 363
Query: 290 FTDPCSSLQVLIVSYETFRMHSSKFSCSE-SCDLLICDEAHRLKNDQT------------ 336
P +S VLI+SYE + S E + DLL+CDE HRLKN
Sbjct: 364 IKHPRNS--VLIISYEM--LVKSHVEIKEITFDLLVCDEGHRLKNSNIKAAKLLHEINCK 419
Query: 337 ----LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
LT +NDL+EF+ +V+F NPGILG ++ YYE I+ + P A + LG
Sbjct: 420 KRIMLTGTPIQNDLKEFYTLVDFVNPGILGSPLEYKNYYEDPIVASQCPNADKNVLSLGS 479
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER++EL + FILRRT ++ +LP K V+ C LT Q +LY+ + K +
Sbjct: 480 ERATELHERTKSFILRRTQNTINKYLPCKYEIVLFCSLTSEQMDLYSLVTDAWFNKTCLQ 539
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
+ K L+ I ALKK+CNHP L + ++ T C
Sbjct: 540 D--KNHTHLSIIIALKKICNHPNLFINDKENTLRETLSKAICTIQLKQ------------ 585
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
D +++ GK+ +L L+ +L+ +TD+++VLVS YTQTLDLF +C +LRLDGT
Sbjct: 586 -DKNFIKYCGKITILQVLMRNLK-KTDEKLVLVSYYTQTLDLFETICNIEELKFLRLDGT 643
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
S S R K++ FN S N + LLS+KAGG GLNL G +RLVLFD DWNPA+D QA AR
Sbjct: 644 ISSSTRSKIIEQFNTRSDNSKILLLSAKAGGVGLNLPGASRLVLFDSDWNPASDVQAMAR 703
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
+WRDGQKK V+IYR L+TGTIEEK+YQRQ+SK L + + D + LST +L+
Sbjct: 704 IWRDGQKKNVYIYRLLTTGTIEEKIYQRQISKASLSESV----VDLNHLGSLKLSTAELK 759
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
DLFT D S H+ ++C+ C + D+G I +E+N D E+ D
Sbjct: 760 DLFTLATDTISLTHDLLNCS-CTDQDNG--HITSSEESN--------DNEMKDYQSILDD 808
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQA 790
C L ++ L +W H Y +P I+Q
Sbjct: 809 KPCRQNLTINQ----------LRDWQH--YKQPIPLDIMQV 837
>gi|409080483|gb|EKM80843.1| hypothetical protein AGABI1DRAFT_71424 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 967
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 254/677 (37%), Positives = 367/677 (54%), Gaps = 84/677 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
++P+ VDP+L R +R HQREGV+F++ECV GL G GCILAD+MGLGKTLQ+IAL++
Sbjct: 316 IIPVVVDPILTRRMRDHQREGVKFLYECVMGLSKHEG-QGCILADEMGLGKTLQTIALVW 374
Query: 231 TLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
TLL Q P+VKK +IV P SL++NW +E KW+G RD V GI
Sbjct: 375 TLLKQNPYLGAGPVVKKVMIVCPVSLMNNWRSEFYKWLG------------RDRV--GIA 420
Query: 289 SFT-DPC--------SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
+++ DP S+ +LI+ YE R S DL+ICDE HRLK+ QT TN
Sbjct: 421 TYSKDPIELHGFKNSSTHPILIIGYERLR------SMVPQIDLIICDEGHRLKSSQTKTN 474
Query: 340 R-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+ NDL EF AM F NPG+L D FR +YE I+ R P A
Sbjct: 475 QMFKDFKTRRRIILSGTPIQNDLSEFHAMTEFCNPGLLDDYPKFRSFYEVPILKSRSPDA 534
Query: 381 TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
+ +E ++G R+S+L ++LRR LL+N+LPPK VV TPLQ +++ +
Sbjct: 535 STKEIEIGEARTSQLLVVAKSYVLRRDANLLNNYLPPKHEYVVFISPTPLQLQIFRKILT 594
Query: 441 SKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF 500
S + + I E+ ++ LA I K+ N P L+ K+ G E+ I F +
Sbjct: 595 S-DREDDIIEQNTTAEALALIGIFTKISNSPILL----KAMAANAEGKENSI-FQKRNVA 648
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
G + LSGK+ L+ +L + + T+++ VLVS+YT TL++ CR+++
Sbjct: 649 DATKLVPVGAQIEDMSLSGKLIALSNILKVVHETTEEKCVLVSHYTSTLNILEAFCRKKQ 708
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
Y Y RLDG T ++RQ VN FN + +N F+FLLSSKAGG G+NLIG +RL L D DWN
Sbjct: 709 YSYFRLDGQTPQAQRQGYVNSFNRSNQRNGFIFLLSSKAGGVGINLIGASRLFLVDSDWN 768
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
P++D Q+ AR RDGQK+ VFIYR L+ G I+EK+YQRQM+K L + ++A++
Sbjct: 769 PSHDIQSMARCHRDGQKRPVFIYRLLTAGAIDEKIYQRQMTKLALSDSLI--GGTANASK 826
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD----DGAESIGEGD-ETNSANKND 734
+ + DL+D+F H + S H+ + C + + D + SI +G E N+
Sbjct: 827 SDTFTKRDLQDIFRIHVNTPSNTHDLLECPCHEGHSYVATDHSTSIRKGSAEDPGINRGF 886
Query: 735 QSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGH-HFYSMSVPDAI------ 787
+ +VT + L K ++K+ + L NW H + + S D +
Sbjct: 887 VNATQVT-----SDYVNKLDKANLAKKEAALVV---LKNWSHVNCLAASARDLVQDDILR 938
Query: 788 ----LQASAGDEVTFVF 800
+Q G +TFVF
Sbjct: 939 QVLSIQEVPGGTITFVF 955
>gi|398407551|ref|XP_003855241.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
gi|339475125|gb|EGP90217.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 979
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 241/611 (39%), Positives = 335/611 (54%), Gaps = 65/611 (10%)
Query: 152 GVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGC 211
G + LV+ +P+ G +V + VDP+L R LR HQR GV F++ECV G+ + G G
Sbjct: 270 GENALVMKRPKSVPK-GRQMVDVVVDPILTRALREHQRVGVSFLYECVMGMKDFDG-EGA 327
Query: 212 ILADDMGLGKTLQSIALLYTLLCQGFDGKP------MVKKAIIVTPTSLVSNWEAEIKKW 265
ILAD+MGLGKTLQ+IALL+TLL Q P ++KKA+IV P +++ NW+ EI KW
Sbjct: 328 ILADEMGLGKTLQTIALLWTLLKQDPAQNPAQPGIGLIKKALIVCPVTVIKNWKKEIYKW 387
Query: 266 VG--GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
+G G +A + D G ++I+ YE + K D++
Sbjct: 388 LGKTGISVFVADNHNRITDFTKG--------KCYNIMIIGYEKL-VKVQKQLQEAKIDIV 438
Query: 324 ICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYF 364
I DE HRLK Q + + +NDL EFF MV+ NP +LG F
Sbjct: 439 IADEGHRLKTAANKAAQAIKSLNTDKRIILSGTPIQNDLSEFFMMVDLVNPSVLGKYTTF 498
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
+R +E I+ R+P AT + G RS EL+ N FILRRT+ +LS +LPPK VV
Sbjct: 499 KREFEGPIVASRQPGATAAALEKGEARSEELANITNMFILRRTSEILSKYLPPKTEYVVF 558
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
CK T +Q ++Y I + A++ T+ +L IT LKK+CN PKL+ + GN
Sbjct: 559 CKPTKVQKQIYRAVIEAPVFVAAMNTPTE---VLRLITMLKKVCNAPKLLIKKDEKGNEE 615
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
D I P + S GK+ VL LL + +TD+++VLVSN
Sbjct: 616 RVA--DLIEHIPQSLLKAPHAS------------GKLAVLDDLLFQIDTKTDEKVVLVSN 661
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGL 603
YT TLD+ Y +LRLDG+T ++KRQ LV+ FN P FVFLLS+KAGG G+
Sbjct: 662 YTSTLDVLQDFIGLLGYSWLRLDGSTPVAKRQDLVDTFNRSPKTKSFVFLLSAKAGGVGI 721
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NLIG +RL+L+D DWNPA D QA ARV RDGQK+ IYR L+ G ++EK++QRQ+SK G
Sbjct: 722 NLIGASRLILYDLDWNPATDLQAMARVHRDGQKRPCHIYRLLTQGALDEKIFQRQISKTG 781
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE 723
L + I ++ +S S +LRDLF + + H+ + C+ N G +G+
Sbjct: 782 LAESIVDGKSAASG-----FSQAELRDLFKLDESDDCQTHKLLGCSCGGN---GLPVVGD 833
Query: 724 GDETNSANKND 734
ET S+ +ND
Sbjct: 834 DTET-SSERND 843
>gi|443896932|dbj|GAC74275.1| DNA repair protein [Pseudozyma antarctica T-34]
Length = 1029
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/625 (39%), Positives = 336/625 (53%), Gaps = 62/625 (9%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL-LNAAGIHGCILADDMGLGKTLQSI 226
G +V + +DP L + LRPHQ EGV+F++E V G+ + G ILAD+MGLGKTLQ+I
Sbjct: 309 GLPVVDVVLDPQLAKALRPHQIEGVKFLYERVMGMHADGEKGQGAILADEMGLGKTLQTI 368
Query: 227 ALLYTLLCQGFDGKPM---VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC---ESTR 280
AL+ TLL Q P +++AIIV P +LV NW+ E KKW+G L LC R
Sbjct: 369 ALVLTLLKQSCYYTPASCTIERAIIVCPLTLVKNWKREFKKWIGTNA-LNVLCIDEGRGR 427
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR 340
DV + S S VL++ YE R F L++CDE HRLK+ + T +
Sbjct: 428 QDVARFVRS-----RSYHVLVIGYEKLRTCKDLFK-DAPVGLIVCDEGHRLKSKEAKTTQ 481
Query: 341 -------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
NDL EFFAM++F PG+L A F++ +E I+ R +
Sbjct: 482 MFDELSAERKIILSGTPIQNDLSEFFAMIDFVAPGMLNSYASFKKIFEEPIMRSRAQHCS 541
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ K G R+S L N ILRRT +LSN LPPK V+ C +P Q +Y + S
Sbjct: 542 KHTKATGQARASALMTITNDIILRRTADILSNFLPPKKEMVLFCSPSPEQIRIYQSILAS 601
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIY-DTIKSGNPGTTGF-EDCIRFFPPEM 499
+V+ + + L I L+KLCN P+L+ D+ G T D R+FPP
Sbjct: 602 NDVRSLLRGDAGNG--LLQIGVLRKLCNTPELLLRDSEADGASATKALVGDMARYFPPNF 659
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
+ SGK+ + +LL LR TDD++VLVSN+T TLD+ + R++
Sbjct: 660 VRNDA-----------RFSGKLVCVMQLLEKLRAETDDKVVLVSNFTSTLDIVEAMMRKK 708
Query: 560 RYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
RY YLRLDG T +R +VN FN D + FVFLLS+K+GG GLNLIG NRLVL D DW
Sbjct: 709 RYSYLRLDGKTPQDERMDMVNQFNRDGVDSSFVFLLSAKSGGVGLNLIGANRLVLIDSDW 768
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NP+ D QA AR+ RDGQKK +IYR L +GT++EK+YQRQ+SK GL + + SS T
Sbjct: 769 NPSTDLQAMARIHRDGQKKVCYIYRLLLSGTMDEKIYQRQISKLGLTDSLIKGDKSSSDT 828
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGA--ESIGEGDETNSANKNDQS 736
S E+LRD+FT H D H + C C GA + + EG + + +
Sbjct: 829 ----FSQEELRDIFTLHLDSPCISHRQLVCD-CDRRGGGASLDGLAEGMDASQTSVASSD 883
Query: 737 DQEVTDIGGFAGLAGCLHKLKSSEK 761
D D+ GF +A H + ++K
Sbjct: 884 D----DLPGF--VAASQHVVDRAQK 902
>gi|317026496|ref|XP_001389729.2| DNA-dependent ATPase [Aspergillus niger CBS 513.88]
Length = 993
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/629 (39%), Positives = 343/629 (54%), Gaps = 70/629 (11%)
Query: 110 CARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGG 169
+RK V RP+L + LP T + + PG LV+ +P+ G
Sbjct: 215 ASRKGTVTGTYKRPLLESTV----LPPTPSEKPVPRHDPSQPGA--LVMRRPDSVPK-GK 267
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
+V + VDP L + LRPHQREGV+F++ECV G+ + G G ILADDMGLGKTLQ+I LL
Sbjct: 268 QIVDVVVDPFLAKHLRPHQREGVRFLYECVMGMRSFNG-EGAILADDMGLGKTLQTITLL 326
Query: 230 YTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSG 286
+TLL Q +D P+VKKA+IV P +L++NW E +KW+G R+ + DD
Sbjct: 327 WTLLKQNPVYDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVF-----DDKRKR 381
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
+ FT + V+IV YE R + S D+++ DE HRLK Q + +
Sbjct: 382 LTDFTR-GRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLN 440
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDL+EFFA V+ NPG+LG F R +E I+ R+P AT ++ +
Sbjct: 441 ATKRIILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEK 500
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G R+ EL ++F+LRRT +L+ +LPPK V+ CK T Q+ +Y + + S + A
Sbjct: 501 GEARNEELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSA 560
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-------GFEDCIRFFPPEMF 500
+ L IT LKKLCN P L+ + P T + +R F P
Sbjct: 561 LGNS---ESALQLITILKKLCNSPSLLTPRDVNETPSETIAALLSSLPPNLLRHFTPSS- 616
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
S K+ VL +LL LR +T ++IVLVSNYT TL+L A L
Sbjct: 617 -----------------SAKLRVLDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLS 659
Query: 561 YPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
P+LRLDG+T KRQ LV FN PS F FLLS+KAGG GLNLIG +RLVLFD DWN
Sbjct: 660 LPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKAGGTGLNLIGASRLVLFDVDWN 719
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++K GL + E+ DS A
Sbjct: 720 PATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSV-MEKKDSVAQ- 777
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S ++L+DLF ++ + + HE + C
Sbjct: 778 ---FSRDELKDLFRLDEESKCQTHELLDC 803
>gi|392593565|gb|EIW82890.1| hypothetical protein CONPUDRAFT_101343 [Coniophora puteana
RWD-64-598 SS2]
Length = 1035
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/619 (39%), Positives = 338/619 (54%), Gaps = 85/619 (13%)
Query: 150 PPGVDPLVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLN 204
P +V+ P E Q+ N ++P+ +DP++ R LR HQ EGV+F++ECV GL
Sbjct: 279 PKAEGAIVMRVPSEQQSQKYNKKSATVIPVVLDPIIARHLREHQIEGVRFLYECVMGLRR 338
Query: 205 AAGIHGCILADDM-----GLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNW 258
G GCILAD+M GLGKTLQ+IAL++TLL Q + G P + K +IV P SLV+NW
Sbjct: 339 HEG-QGCILADEMQVFGLGLGKTLQTIALVWTLLKQNPYGGGPTLSKVLIVCPVSLVNNW 397
Query: 259 EAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS-C 316
AE KW+G RV + T D + I F + VLI+ YE R + C
Sbjct: 398 RAEFHKWLGRDRVGIF-----TGDKDKAKIKHFVN-SKIHHVLIIGYEKLRTVIDDLAYC 451
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
S L++CDE HRLK+ T+ +NDL EF AM +F NPG+
Sbjct: 452 SPPIGLIVCDEGHRLKSSSNKTSTMFKSLRTPRRIILSGTPIQNDLSEFHAMADFCNPGL 511
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
L D FRR YET I+ R P AT +E ++G RS++L+ F+LRR LL LPP
Sbjct: 512 LDDYPTFRRIYETPILKSRAPDATVKETQIGNARSTQLADVAKSFVLRREATLLKKFLPP 571
Query: 418 K-----------IIE-------VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
K +I+ VV T LQ ++ ++ +N+ + T +S LA
Sbjct: 572 KREFPHSFPCLYLIKLENTDEYVVFITPTKLQLSIFAAILNPRNLDDLMQSSTAES--LA 629
Query: 460 YITALKKLCNHPKLI---YDTIKSGNPGTT---GFEDCIRFFPPEMFSGRSGSWTGGDGA 513
I L K+ N P L+ D K+ N G E+ + P D A
Sbjct: 630 LINMLTKISNSPILLKAQADKAKASNAAVIHRRGMEEALALLP--------------DRA 675
Query: 514 WVE---LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
+E LSGK+ LA+LL +R+ T+++ ++VS+YT TL++ C+ + Y Y RLDG T
Sbjct: 676 EIEDFSLSGKLTALAKLLKIIRKETEEKCIIVSHYTSTLNIIEAYCKAKSYTYFRLDGQT 735
Query: 571 SISKRQKLVNHFNDPSK-NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
KRQ+ VN FN S+ + F+FLLSSKAGG GLNLIG +RL L D DWNP++D Q+ AR
Sbjct: 736 PAQKRQEYVNIFNKSSQQSHFLFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMAR 795
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
+ RDGQK+ VFIYRFL+ G I+EK+YQRQ++K GL + T +S + + + +DLR
Sbjct: 796 IHRDGQKRPVFIYRFLTAGAIDEKIYQRQVTKIGLSNSLMGSGTGTS--KSDSFTKKDLR 853
Query: 690 DLFTFHDDVRSEIHENMHC 708
D+F H D H+ + C
Sbjct: 854 DIFRVHPDTGCNTHDLLGC 872
>gi|383847118|ref|XP_003699202.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Megachile rotundata]
Length = 856
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/672 (37%), Positives = 346/672 (51%), Gaps = 98/672 (14%)
Query: 154 DPLVLWQPEEPQNDGGNLVP-----ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
+PL++ QN N + ++VD LV LR HQR G+ F++EC+ G+ +
Sbjct: 245 NPLIMPPMYTSQNWAENEISKDEKEVSVDACLVNVLRQHQRYGIIFLYECIMGI-KTSNY 303
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
+G ILAD+MGLGKTLQ I L++TLL +G G P++K +IVTP+SL +NW E K W+G
Sbjct: 304 YGAILADEMGLGKTLQCITLVWTLLKKGPYGSPVLKTVLIVTPSSLCNNWNKEFKHWLGF 363
Query: 269 RVQLIALCESTRDDVVSGIDSFTDPCSSLQ--VLIVSYETFRMHSSKFSCSESC-----D 321
LC VV+ + D + V+I+SY+ C E D
Sbjct: 364 H----RLCPY----VVNAKNKLKDFKKQARNSVVIISYDML------IRCEEEIEQINFD 409
Query: 322 LLICDEAHRLKNDQT-----LTN--------------RNDLEEFFAMVNFTNPGILGDAA 362
L+ICDE HRLKN++ L+N +NDL+EFFA+VNF NPGILG
Sbjct: 410 LIICDEGHRLKNNEIKAAKLLSNINCKRRILLTGTPIQNDLQEFFALVNFVNPGILGSNN 469
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F+ YYE I+ + P A LG ER++EL K FILRRT ++ +LP K V
Sbjct: 470 EFKNYYENPIVASKCPHAAYSVASLGTERATELHEKTRSFILRRTQDTINKYLPSKHELV 529
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT----I 478
V C+L+ Q +LY+ + K + L IT LKK+CNHPKL Y+
Sbjct: 530 VFCRLSDEQEKLYSLVTDTWFNKSVLPNSNVPH--LTVITTLKKICNHPKLFYNEKNEFW 587
Query: 479 KSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR 538
+ G + ++ E + GK+ V+ L+ +L+ TD++
Sbjct: 588 NNSAINLNGTTNICKYTSREQY-----------------CGKISVVQTLMKNLKN-TDEK 629
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKA 598
+VL+S YTQTLDL +C +LRLDG+T + R K++ FN + N +FLLS+KA
Sbjct: 630 LVLISYYTQTLDLLETVCSTEGLHFLRLDGSTPATTRSKIIEQFNSKNHNSKIFLLSAKA 689
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GG GLNL G +RL+LFD DWNPA+D QA AR+WRDGQKK V+I R L+TGTIEEK++QRQ
Sbjct: 690 GGVGLNLFGASRLILFDSDWNPASDSQAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQ 749
Query: 659 MSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGA 718
+SK GL + + DS+ LS +L+DLFT H+ M C+
Sbjct: 750 VSKAGLSETV----VDSNCFDSLKLSMNELKDLFTLTTGTNCLTHDLMQCS--------- 796
Query: 719 ESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHF 778
++ N K Q QE D L SE L+ W H
Sbjct: 797 -----CNDCNKTEKVPQKLQEENDRE--------YQLLLQSEVSNSNLTINQLSKWEH-- 841
Query: 779 YSMSVPDAILQA 790
Y VPD IL+
Sbjct: 842 YQQPVPDKILKV 853
>gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior]
Length = 857
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/559 (41%), Positives = 323/559 (57%), Gaps = 55/559 (9%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I VD LV LR HQR G+ F++EC+ GL G ILAD+MGLGKTLQ I L++T+L
Sbjct: 268 ILVDSCLVAKLREHQRHGIVFLYECLMGL-KVPNYFGAILADEMGLGKTLQCITLIWTML 326
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTD- 292
+G GKP++K+ +IVTP+SL +NWE E KW+G R ++ V+ G + D
Sbjct: 327 KKGPYGKPIIKRVLIVTPSSLCNNWEKEFVKWLG-RHRIFPY-------VIGGKNKPKDF 378
Query: 293 ---PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-------------- 335
P +S ++I+SYE F ++ + + DL++CDE HRLKN
Sbjct: 379 IKYPRNS--IMIISYEMFIKCHTEIN-EMTFDLIVCDEGHRLKNSNIKAAKMLNEINCKK 435
Query: 336 --TLTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIE 390
LT +NDL+EF+A+++F NPGILG ++ YYE II + +A ++ LG E
Sbjct: 436 RIVLTGTPIQNDLKEFYALIDFVNPGILGTPNEYKSYYEEPIIAAQYSSADDDVLSLGNE 495
Query: 391 RSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
RS+EL FILRR+ ++ +LP K V+ C LT Q +LY+ + K I
Sbjct: 496 RSAELYKHTKSFILRRSQKAINKYLPYKYEIVLFCSLTKKQKDLYSLITDAWFNK--ICL 553
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
E K + L+ ITALKK+CNHP L N D + S
Sbjct: 554 EDKSNIHLSIITALKKICNHPNLFL------NEEEKALYDVLS-------KVSYLSQIKR 600
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
D + E GK+ ++ L+ +L+ +TD+++VLVS YTQTLDL +C R +LRLDG T
Sbjct: 601 DENFTEYCGKVTIVQTLMRNLK-KTDEKLVLVSYYTQTLDLLETICNMERLKFLRLDGAT 659
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
S + R K+ FN + N V LLS+KAGG GLNL G +RLVLFD DWNPA+D QA AR+
Sbjct: 660 SSTIRLKITEQFNTQTDNSKVLLLSAKAGGVGLNLPGASRLVLFDSDWNPASDMQAMARI 719
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
WRDGQK+ V+IYR L+TGTIEEK+YQRQ+SK L + + D + LST +L+D
Sbjct: 720 WRDGQKRNVYIYRLLTTGTIEEKIYQRQISKANLSETV----VDLNYLGSLKLSTAELKD 775
Query: 691 LFTFHDDVRSEIHENMHCT 709
LFT D S H+ ++C+
Sbjct: 776 LFTLASDTMSLTHDLINCS 794
>gi|241602475|ref|XP_002405194.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
gi|215500578|gb|EEC10072.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
Length = 680
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/576 (40%), Positives = 334/576 (57%), Gaps = 56/576 (9%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + VD L R LRPHQ++G+ F++EC+ + G G ILAD+MGLGKTLQ I L++
Sbjct: 62 VVDVVVDASLARCLRPHQQQGLVFLYECIMEMRPFDG-GGAILADEMGLGKTLQCITLVW 120
Query: 231 TLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWV-GGRVQLIALCESTRDDVVSGID 288
TLL QG + G P++++ II+TP+SLV NW E KKW+ +++ + + + ++
Sbjct: 121 TLLRQGPYGGYPVLRRIIIITPSSLVKNWVKEFKKWLPNSNLRIYYVGQKNK------VE 174
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-----TLTN---- 339
F S VLI+SYE + S + + + DLLICDEAHRLKN +L N
Sbjct: 175 GFLRQPSLYPVLILSYEMYLRVSDSLA-NINFDLLICDEAHRLKNANIKIAGSLQNLGIT 233
Query: 340 ----------RNDLEEFFAMVNFTNPGILGDAAY---------FRRYYETSIICGREPTA 380
+NDL+EFF +++F NPGILG Y FRR YE I+ R P A
Sbjct: 234 RKILVTGTPVQNDLQEFFTLIDFCNPGILGKYPYVCQRIGPSSFRRVYEEPILQSRLPQA 293
Query: 381 TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
TEE+K+LG R++ELS F+LRRT ++ ++LP K VV C+ T LQ +Y +
Sbjct: 294 TEEQKELGQARANELSRITALFVLRRTQDVVQSYLPGKAECVVFCRPTSLQLTVYRELLA 353
Query: 441 SKNVKRAISE--ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR----F 494
S V+ +S + LA I AL+KLCNHP L+ P C R
Sbjct: 354 SNAVQACLSSYLSCDANHHLACILALRKLCNHPSLV-------TPRHMSLWGCFRSSQDL 406
Query: 495 FPPEMFSGRSGSWTGGDGAWVEL-SGKMHVLARLLGHLRQRTD-DRIVLVSNYTQTLDLF 552
P + S + +E SGK+ VLA +L L + ++IV+VSN+T+ L++
Sbjct: 407 LPTKSQKQFSLDMSKLAAESLEASSGKLKVLAAMLASLWDSSPREKIVVVSNFTRMLNVV 466
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
+LC + Y ++RLDG+TS ++R ++V FN + FVFLLS KAGG GLNLIG +R+V
Sbjct: 467 QELCACKGYTFVRLDGSTSSTQRLEIVERFNSAHSDCFVFLLSCKAGGVGLNLIGASRIV 526
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
L+D DWNPAND QA ARVWRDGQ + V++YR ++TGT+EEK+YQRQ+ K L + + +++
Sbjct: 527 LYDVDWNPANDLQAMARVWRDGQGRHVYVYRLVTTGTVEEKIYQRQVMKLDLSRTVLEKK 586
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
D + S EDL+ LFT + S H + C
Sbjct: 587 QDGKKAK---FSLEDLKGLFTLEEGTASSTHRLLGC 619
>gi|302853754|ref|XP_002958390.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f.
nagariensis]
gi|300256270|gb|EFJ40540.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f.
nagariensis]
Length = 854
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/573 (42%), Positives = 323/573 (56%), Gaps = 56/573 (9%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+VP+ +DP L R LRPHQ+EGV+FM+E V GL + GCILAD+MGLGKTLQ I L +
Sbjct: 154 VVPVVIDPYLGRHLRPHQQEGVRFMYEAVMGL-TSPDRTGCILADEMGLGKTLQVITLAW 212
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIAL--CESTR-DDVVSG 286
TLL QG +G+P+ K ++V P +LV NW E+KKW+G R+QL C S V+G
Sbjct: 213 TLLRQGPEGRPLAAKVLVVAPATLVDNWGREVKKWLGSERLQLCLYLPCLSLHCYGTVTG 272
Query: 287 IDSFTDPCSSLQVLIVS---YETFRMHSSKFSCSESCDLLICDEAHRLKN-------DQT 336
C LQ + YET R H+ + DLL+CDE HRLK+ D
Sbjct: 273 QTYLQTLC--LQQASAAKQHYETLRKHAGDLK--GAFDLLVCDEGHRLKSVGGNKTIDAL 328
Query: 337 LT-------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
L+ +NDL+EF+A+++F P +LG A F R Y I +E TAT E
Sbjct: 329 LSLDCPRRILLTGTPVQNDLKEFYALLSFVVPDVLGTPAVFNRVYGIPITRSQEATATAE 388
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
EK+LG R+SEL +KV FILRRT ALL+ HLPP + CK + Q LY+ + SK
Sbjct: 389 EKELGAGRASELQSKVAVFILRRTQALLAKHLPPLTSLTLFCKPSDQQIGLYSAVLRSKA 448
Query: 444 VKRAI-SEETKQSKILAYITALKKLCNHPKLIYD--------TIKSGNPGTTGFEDCIRF 494
V + + LA ITAL+K+ NHP L+ D T + N G T C+
Sbjct: 449 VASLLYGGGGGEDNTLAVITALRKVANHPDLLLDPSGDAGEATAEGANTGRTCSSSCLPS 508
Query: 495 FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
F + + TG A +GKM VL+ LL + R +R V+VS T TLDL Q
Sbjct: 509 FSKQFTA------TGSHQA----AGKMQVLSLLLSAIAAR-GERCVVVSTSTATLDLVGQ 557
Query: 555 L-CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
L C+ + +R+DG TS+ RQ +V++FN + VFLLS++AGG GLNL+G LVL
Sbjct: 558 LVCKAQGLTTVRIDGGTSVEGRQTVVDNFNKLGMGQ-VFLLSTRAGGAGLNLVGACHLVL 616
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK--VIQQE 671
+D DWNPA D+QA AR+WRDGQ K F+YR L+TGTIEEKVYQRQ+ K L V
Sbjct: 617 YDSDWNPAMDQQAMARIWRDGQTKPCFVYRLLTTGTIEEKVYQRQLMKADLASATVTGGS 676
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
+ G + E+LR LF+ + S+ +
Sbjct: 677 GAAGGSKGGGKFTREELRQLFSLNTATASDTRD 709
>gi|134055853|emb|CAK96198.1| unnamed protein product [Aspergillus niger]
Length = 1007
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/629 (39%), Positives = 343/629 (54%), Gaps = 70/629 (11%)
Query: 110 CARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGG 169
+RK V RP+L + LP T + + PG LV+ +P+ G
Sbjct: 229 ASRKGTVTGTYKRPLLESTV----LPPTPSEKPVPRHDPSQPGA--LVMRRPDSVPK-GK 281
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
+V + VDP L + LRPHQREGV+F++ECV G+ + G G ILADDMGLGKTLQ+I LL
Sbjct: 282 QIVDVVVDPFLAKHLRPHQREGVRFLYECVMGMRSFNG-EGAILADDMGLGKTLQTITLL 340
Query: 230 YTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSG 286
+TLL Q +D P+VKKA+IV P +L++NW E +KW+G R+ + DD
Sbjct: 341 WTLLKQNPVYDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVF-----DDKRKR 395
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
+ FT + V+IV YE R + S D+++ DE HRLK Q + +
Sbjct: 396 LTDFTR-GRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLN 454
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDL+EFFA V+ NPG+LG F R +E I+ R+P AT ++ +
Sbjct: 455 ATKRIILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEK 514
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G R+ EL ++F+LRRT +L+ +LPPK V+ CK T Q+ +Y + + S + A
Sbjct: 515 GEARNEELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSA 574
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-------GFEDCIRFFPPEMF 500
+ L IT LKKLCN P L+ + P T + +R F P
Sbjct: 575 LGNS---ESALQLITILKKLCNSPSLLTPRDVNETPSETIAALLSSLPPNLLRHFTPSS- 630
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
S K+ VL +LL LR +T ++IVLVSNYT TL+L A L
Sbjct: 631 -----------------SAKLRVLDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLS 673
Query: 561 YPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
P+LRLDG+T KRQ LV FN PS F FLLS+KAGG GLNLIG +RLVLFD DWN
Sbjct: 674 LPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKAGGTGLNLIGASRLVLFDVDWN 733
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++K GL + E+ DS A
Sbjct: 734 PATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSV-MEKKDSVAQ- 791
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S ++L+DLF ++ + + HE + C
Sbjct: 792 ---FSRDELKDLFRLDEESKCQTHELLDC 817
>gi|390602016|gb|EIN11409.1| hypothetical protein PUNSTDRAFT_141784 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 980
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/596 (38%), Positives = 333/596 (55%), Gaps = 57/596 (9%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+VP+ +DP+L LRPHQ+EGV+F++ECV GL G GCILAD+MGLGKTLQ+IAL++
Sbjct: 272 IVPVVLDPILAVRLRPHQKEGVKFLYECVMGLRKHEG-QGCILADEMGLGKTLQTIALVW 330
Query: 231 TLLCQG-FDG-KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
TLL Q + G P++ KA+IV P SL++NW+ E KW+G + + + + + I+
Sbjct: 331 TLLKQNPYAGVGPVIGKAMIVCPVSLINNWKNEFHKWLGRDRVGVFVGDKDKAHIKQFIN 390
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTNR------- 340
+ QVL++ YE R C+ L+ICDE HRLK+ T++
Sbjct: 391 TRIH-----QVLVIGYEKLRTVIDDLRYCNPPIGLIICDEGHRLKSANNKTSQMFKALNT 445
Query: 341 ------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
NDL EF AM +F NPG+L D F+R YE I+ R T +E ++G
Sbjct: 446 KRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYKTFKRVYEDPILKSRAVGCTAKEAEIG 505
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
R+++L F+LRR ++L N+LPPK VV T LQ +++ + + + +
Sbjct: 506 EARTTQLLNVAKSFVLRRDASILDNYLPPKCEYVVFVTPTRLQLSIFSQILRADKLDDLV 565
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDT--------IKSGNPGTTGFEDCIRFFPPEMF 500
+S LA I L ++ P L+ T I++ + + P E F
Sbjct: 566 EGSVAES--LALINMLTRVSTSPVLLKATADQAKSKSIQANSIKRNALYQAVALLP-ERF 622
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
V LSGK+ LA LL +R+ T+++ ++VS+YT TL + Q C+ +
Sbjct: 623 KIED----------VSLSGKLTALASLLRMIRKHTEEKCIVVSHYTSTLHIIEQFCKVKG 672
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKN-EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
Y YLRLDG T +KRQ+ VN FN S++ +F+FLLS+KAGG GLNLIG +RL L D DWN
Sbjct: 673 YTYLRLDGQTPPTKRQEYVNEFNKTSQSAKFLFLLSAKAGGVGLNLIGASRLCLIDSDWN 732
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
P++D QA AR+ RDGQK+ VFIYRFL+ GTI+EK+YQRQ++K GL + T S+
Sbjct: 733 PSHDLQAMARIHRDGQKRPVFIYRFLTAGTIDEKIYQRQVTKLGLSDSLMGTDTGGSSKS 792
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHC------TRCQNYDDGAESIGEGDETNS 729
+F + +DLRD+F H + HE + C + DD AE E E+ +
Sbjct: 793 DSF-TAKDLRDIFRVHLNTACHTHELLDCPCDREGSSTDREDDNAEYTDEEAESTA 847
>gi|291227441|ref|XP_002733693.1| PREDICTED: RAD54 homolog B-like [Saccoglossus kowalevskii]
Length = 921
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/602 (39%), Positives = 328/602 (54%), Gaps = 83/602 (13%)
Query: 148 TLPPGVDP-----LVLWQP---EEPQNDGGNL--VPITVDPLLVRFLRPHQREGVQFMFE 197
T+ P DP LV+ +P + Q + NL + + VDP L LRPHQR GV FM+E
Sbjct: 289 TVTPKFDPMSPGALVMPRPSPTHQWQYNQHNLPIIDVVVDPHLSTHLRPHQRAGVLFMYE 348
Query: 198 CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVS 256
C+ G+ + G G ILAD MGLGKTLQSI L++TLL QG + GKP+VK+ +IVTP+SLV
Sbjct: 349 CIMGMKPSMG-QGAILADAMGLGKTLQSITLIWTLLKQGPYGGKPVVKRVLIVTPSSLVK 407
Query: 257 NWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC 316
NW E +KW+G ++ S + G + V+I+SYE M S K
Sbjct: 408 NWSQEFRKWLGKERIMVYSAGSDKPAKDFGQSTI------YPVMIISYELL-MKSIKVIQ 460
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
+ D++ICDE HRLKN T +NDL+EFF++V F NPG
Sbjct: 461 NVQFDIMICDEGHRLKNSNIKTTSMISNLDVKRRIVLTGTPIQNDLQEFFSIVEFCNPGA 520
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG ++ F+R YE I+ G +P A+++E LG R++EL+ F LRRT + +N+LPP
Sbjct: 521 LGTSSGFKRVYEDPIVKGHQPNASQDELLLGETRANELARLTASFTLRRTQEVNTNYLPP 580
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K+ VV C+ + LQ ++YN I S ++ ++ L ++ALKKLCNHP +Y
Sbjct: 581 KVESVVFCRPSKLQLKVYNQLISSSIIRSVLTSSYNGMTHLLCLSALKKLCNHPVFVYRH 640
Query: 478 IKSGNPGTTGFED----------CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
K + E+ C F PE + S + D SGK+ VLA +
Sbjct: 641 AKLQDETCVDGEENVQEILYRDVCSSF--PERYRDESNAVDYTD------SGKLIVLAAM 692
Query: 528 LGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
L T R+V+VSNYTQTLDL QLC + Y Y RLDG+T + RQ +VN F
Sbjct: 693 LKSFHNDTPQQRVVVVSNYTQTLDLLQQLCDKEGYTYGRLDGSTPTATRQDIVNRFTSKY 752
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
++FVFLLS KAGG GLNLIG RL+L+D DWNPAND Q
Sbjct: 753 SDQFVFLLSCKAGGVGLNLIGAARLILYDIDWNPANDLQ--------------------- 791
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
G+IEEK+YQRQ+SK+GL + + D++ S DL+DLF+ H++ H+ +
Sbjct: 792 -GSIEEKIYQRQISKQGLSGAVVDYRKDNNTK----FSQADLKDLFSLHENTDCVTHDLL 846
Query: 707 HC 708
C
Sbjct: 847 DC 848
>gi|67969780|dbj|BAE01238.1| unnamed protein product [Macaca fascicularis]
Length = 489
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/434 (48%), Positives = 271/434 (62%), Gaps = 36/434 (8%)
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------ 340
+LI+SYETFR+H S L+ICDE HRLKN + T +
Sbjct: 12 ILIISYETFRLHVGVLQ-KGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPI 70
Query: 341 -NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
NDL E+F++V+F N GILG A F++++E I+ GR+ A+E ++KLG ER EL++ V
Sbjct: 71 QNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGEERLRELTSIV 130
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
N+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + E L+
Sbjct: 131 NRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLS 190
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
IT+LKKLCNHP LI+D G G D FPP S +LSG
Sbjct: 191 SITSLKKLCNHPALIHDKCVEEEDGFVGALD---LFPPGYSS---------KALEPQLSG 238
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +L R + D++VLVSNYT+TLDLF +LCR RRY Y+RLDGT SI KR K+V
Sbjct: 239 KMLVLDYILAVTRSCSSDKVVLVSNYTRTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVV 298
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK
Sbjct: 299 ERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 358
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
+IYR LS GTIEEK++QRQ K+ L + E+ D S +L++LF +
Sbjct: 359 YIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELKELFILDEASL 414
Query: 700 SEIHENMHCTRCQN 713
S+ H+ +HC RC N
Sbjct: 415 SDTHDRLHCRRCVN 428
>gi|320038964|gb|EFW20899.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
str. Silveira]
Length = 961
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 247/584 (42%), Positives = 332/584 (56%), Gaps = 57/584 (9%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
PG +V+ +PE D +V + VDPLL + LR HQREGV+F++ECV G+ G G
Sbjct: 277 PGA--IVMKRPESVPKDK-QIVDVVVDPLLGKHLREHQREGVKFLYECVMGMRPFNG-EG 332
Query: 211 CILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
ILAD+MGLGKTLQ+IALL+TL+ Q + P+VKKA+IV P +L+ NW+ E +KW+G
Sbjct: 333 AILADEMGLGKTLQTIALLWTLMKQNPIYGASPVVKKALIVCPVTLIKNWQKEFRKWLGN 392
Query: 269 RVQLIALCESTR---DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
+ + + D G+ S V+I+ YE R + + D++I
Sbjct: 393 DRLGVFVADGKHMRLTDFTMGM--------SYNVMIIGYERLRTVQEELAKGRGIDIVIA 444
Query: 326 DEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRR 366
DE HRLK Q + + NDL EFFAMV+F NPG+LG F +
Sbjct: 445 DEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDLSEFFAMVDFVNPGLLGTFKMFMK 504
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+E I+ R+P A++++ + G RS EL+ ++FILRRT +LS HLPPK ++ C
Sbjct: 505 EFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFILRRTADILSKHLPPKTEYILFCN 564
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI-YDTIKSGNPGT 485
TP Q+ +Y H I S + A+ L IT LKKLCN P L+ +K NP
Sbjct: 565 PTPAQANIYRHVIASPIFQSALGN---SESALQLITILKKLCNSPSLLTLKVLKDENPNC 621
Query: 486 TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNY 545
T I PP + S + SGK+ VL +LL +L T ++IVLVSNY
Sbjct: 622 T-ISSLISTLPPNLLRHFSPAS----------SGKIRVLDQLLHNLHSTTSEKIVLVSNY 670
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLN 604
T TL+L A L PYLRLDG+T SKRQ LV+ FN SK+ F FLLS+KAGG GLN
Sbjct: 671 TSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDFNRSSSKSCFAFLLSAKAGGIGLN 730
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
L G +RLVLFD DWNPA D QA AR+ RDGQK+ IYR L G +EEK++QRQ++K GL
Sbjct: 731 LTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKLGL 790
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+ +Q +S A S E+LRDLF +D + H+ + C
Sbjct: 791 SDSV-MDQKNSVA----HFSREELRDLFRLDEDAECQTHDLLGC 829
>gi|327295002|ref|XP_003232196.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
gi|326465368|gb|EGD90821.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
Length = 923
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/603 (39%), Positives = 337/603 (55%), Gaps = 54/603 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP+L + LR HQREGV+F++ECV GL G G ILAD+MGLGKTLQ+IA
Sbjct: 237 GKQIVDVVVDPILGKHLREHQREGVKFLYECVMGLRPFNG-EGAILADEMGLGKTLQTIA 295
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVV 284
L++TLL Q + +P+VKKA+IV P +L++NW+ E KKW+G R+ + D
Sbjct: 296 LIWTLLKQNPIYGSQPVVKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVA-----DGKG 350
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
+ I FT S V+I+ YE R + + D+++ DE HRLK Q + +
Sbjct: 351 NRISDFTM-GRSYSVMIIGYERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQS 409
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
N+L EFFAMV+F NP +LG F R +E I+ R+P A ++
Sbjct: 410 LNTTRRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVI 469
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G RS EL+ + FILRRT +LS HLPPK ++ C T Q +Y+H + S +
Sbjct: 470 EKGKARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRSVYHHVLASPMFQ 529
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIK-SGNPGTTGFEDCIRFFPPEMFSGRS 504
+ L IT LKK+CN P L+ ++ +G T + PP + +
Sbjct: 530 SVLRNS---ESALQLITILKKVCNSPSLLKPKVEDNGKCEDTSMSALLSSLPPSIHRCLA 586
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
SGK+ VL +LL +L+ +T +++VLVSNYT TL+L A L P+L
Sbjct: 587 AGS----------SGKIRVLDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFL 636
Query: 565 RLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
RLDG+T ++RQ LV FN PS + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D
Sbjct: 637 RLDGSTPATRRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATD 696
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA AR+ RDGQK+ IYR L G IEEK++QRQ++K GL + D +F
Sbjct: 697 IQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVM----DQKGGIAHF- 751
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGD----ETNSANKNDQSDQE 739
S E+L+DLF + + + HE + C C + + I E D E+ S + ++ D E
Sbjct: 752 SQEELKDLFRLDESSKCQTHELLGC-ECGGRGETPKGIKEEDNLCAESTSVSSSEDDDHE 810
Query: 740 VTD 742
+ D
Sbjct: 811 LED 813
>gi|303317828|ref|XP_003068916.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108597|gb|EER26771.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 961
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/607 (41%), Positives = 340/607 (56%), Gaps = 68/607 (11%)
Query: 141 NVIEENFTLP--------PGVDP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPH 187
N ++E+ LP P DP +V+ +PE D +V + VDPLL + LR H
Sbjct: 252 NPLKEDSVLPSKPNKEVTPRHDPNQPGAIVMKRPESVPKDK-QIVDVVVDPLLGKHLREH 310
Query: 188 QREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKK 245
QREGV+F++ECV G+ G G ILAD+MGLGKTLQ+IALL+TL+ Q + P+VKK
Sbjct: 311 QREGVKFLYECVMGMRPFNG-EGAILADEMGLGKTLQTIALLWTLMKQNPIYGASPVVKK 369
Query: 246 AIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR---DDVVSGIDSFTDPCSSLQVLIV 302
A+IV P +L+ NW+ E +KW+G + + + D G+ S V+I+
Sbjct: 370 ALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGM--------SYNVMII 421
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
YE R + + D++I DE HRLK Q + + NDL
Sbjct: 422 GYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDL 481
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
EFFAMV+F NPG+LG F + +E I+ R+P A++++ + G RS EL+ ++FI
Sbjct: 482 SEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFI 541
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRT +LS HLPPK ++ C TP Q+ +Y H I S + A+ L IT
Sbjct: 542 LRRTADILSKHLPPKTEYILFCNPTPAQANIYRHVIASPIFQSALGN---SESALQLITI 598
Query: 464 LKKLCNHPKLI-YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
LKKLCN P L+ +K NP T I PP + S + SGK+
Sbjct: 599 LKKLCNSPSLLTLKVLKDENPNCT-ISSLISTLPPNLLRHFSPAS----------SGKIR 647
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL +L T ++IVLVSNYT TL+L A L PYLRLDG+T SKRQ LV+ F
Sbjct: 648 VLDQLLHNLHSTTSEKIVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDF 707
Query: 583 N-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
N SK+ F FLLS+KAGG GLNL G +RLVLFD DWNPA D QA AR+ RDGQK+ I
Sbjct: 708 NRSSSKSCFAFLLSAKAGGIGLNLTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHI 767
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YR L G +EEK++QRQ++K GL + +Q +S A S E+LRDLF +D +
Sbjct: 768 YRMLLRGGLEEKIWQRQVTKLGLADSV-MDQKNSVA----HFSREELRDLFRLDEDAECQ 822
Query: 702 IHENMHC 708
H+ + C
Sbjct: 823 THDLLGC 829
>gi|406867495|gb|EKD20533.1| DNA repair and recombination protein RAD26 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 945
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/584 (40%), Positives = 322/584 (55%), Gaps = 53/584 (9%)
Query: 150 PPGVDPLVLWQPEE-PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
P D LV+ +P++ P+ G +V + +DP L R LR HQREGV+FM+ECV G+ + G
Sbjct: 254 PTAPDALVMQRPKDCPK--GKQIVDVVLDPFLGRHLREHQREGVKFMYECVMGIRDYDG- 310
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G +LAD+MGLGKTLQ+I LL+TLL Q P+VKKA+IV P +L+ NW+ E KW+
Sbjct: 311 RGALLADEMGLGKTLQTICLLWTLLKQNPIHGSDPVVKKALIVCPVTLIDNWKKEFNKWL 370
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
G + I + + I FT S V+I+ YE R D++I D
Sbjct: 371 GN--ERIGVFVEGGQNKKRKITDFTH-GKSYSVMIIGYERLRSVHDDLKKGAGIDIVIAD 427
Query: 327 EAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLK Q + +NDL EFF MV+F NPG+LG F++
Sbjct: 428 EGHRLKTAQNKSALAIRNLNTDRRVILSGTPMQNDLSEFFTMVDFINPGLLGKYNTFKKE 487
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+E I+ R+P A+ ++ + G R EL+ FILRRT +LS +L K VV CK
Sbjct: 488 FEGPILKSRQPEASAKDIEKGAARGEELTMLTKTFILRRTAEILSKYLKSKTEYVVFCKP 547
Query: 428 TPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS-GNPGTT 486
T Q+E+Y H I S +A+ L IT LKK+CN P L+ + NP
Sbjct: 548 TQAQAEIYQHIIASPFFGKALGTSEAS---LQLITILKKVCNAPSLLMQKADAPSNPLVA 604
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
D I P +S + S K VL +LL + T +++V+VSNYT
Sbjct: 605 ALLDVI----PRELMQKSNAIA---------SAKFRVLDQLLKCISTTTTEKVVIVSNYT 651
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN--DPSKNEFVFLLSSKAGGCGLN 604
TLDL Q P+LRLDG T+ RQ LV+ FN D SK F FLLS+K+GG GLN
Sbjct: 652 STLDLVGQHLTSMSLPFLRLDGKTAQKSRQGLVDTFNKTDASKT-FAFLLSAKSGGSGLN 710
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
L+G +RL+LFD DWNPA D+QA AR+ RDGQK+ V IYRF+ G ++EK+YQRQ++K GL
Sbjct: 711 LVGASRLILFDVDWNPATDQQAMARIHRDGQKRPVKIYRFVLAGGMDEKIYQRQVTKTGL 770
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+ D ++G+F + ++LRDLF + + HE + C
Sbjct: 771 ADSV----VDGKKSEGSF-TAQELRDLFRLDMNAGCQTHELLGC 809
>gi|350638705|gb|EHA27061.1| hypothetical protein ASPNIDRAFT_119444 [Aspergillus niger ATCC
1015]
Length = 967
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/629 (40%), Positives = 341/629 (54%), Gaps = 70/629 (11%)
Query: 110 CARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGG 169
+RK V RP+L + LP T + + PG LV+ +P+ G
Sbjct: 215 ASRKGTVTGTYKRPLLESTV----LPPTPSEKPVPRHDPSQPGA--LVMRRPDS-VPKGK 267
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
+V + VDP L + LRPHQREGVQF++ECV G+ + G G ILADDMGLGKTLQ+I LL
Sbjct: 268 QIVDVVVDPFLAKHLRPHQREGVQFLYECVMGMRSFNG-EGAILADDMGLGKTLQTITLL 326
Query: 230 YTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSG 286
+TLL Q D P+VKKA+IV P +L++NW E +KW+G R+ + DD
Sbjct: 327 WTLLKQNPVHDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVF-----DDKRKR 381
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
+ FT + V+IV YE R + S D+++ DE HRLK Q + +
Sbjct: 382 LTDFTR-GRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLN 440
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDL+EFFA V+ NPG+LG F R +E I+ R+P AT ++ +
Sbjct: 441 ATKRIILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEK 500
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G R+ EL ++F+LRRT +L+ +LPPK V+ CK T Q+ +Y + + S + A
Sbjct: 501 GEARNEELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSA 560
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-------GFEDCIRFFPPEMF 500
+ L IT LKKLCN P L+ + P T + +R F P
Sbjct: 561 LGNS---ESALQLITILKKLCNSPSLLTPRDVNETPSETIAALLSSLPPNLLRHFTPSS- 616
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
S K+ VL +LL LR +T ++IVLVSNYT TL+L A L
Sbjct: 617 -----------------SAKLRVLDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLS 659
Query: 561 YPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
P+LRLDG+T KRQ LV FN PS F FLLS+KAGG GLNLIG +RLVLFD DWN
Sbjct: 660 LPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKAGGTGLNLIGASRLVLFDVDWN 719
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++K GL + E+ DS A
Sbjct: 720 PATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSV-MEKKDSVAQ- 777
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S +L+DLF ++ + + HE + C
Sbjct: 778 ---FSRGELKDLFRLDEESKCQTHELLGC 803
>gi|134109445|ref|XP_776837.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1045
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/611 (39%), Positives = 349/611 (57%), Gaps = 68/611 (11%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DP+L LR HQ+EGV+FM+ CV G+ A G GCILAD+MGLGKTLQ+IA
Sbjct: 316 GTTIVDVVLDPVLGNLLRDHQKEGVKFMYSCVMGMTGAEG-EGCILADEMGLGKTLQTIA 374
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L+YT+L Q + ++ KAIIV P +LV NW E KKWV RV ++ V
Sbjct: 375 LIYTMLKQSPFANQTSIIGKAIIVCPVTLVDNWRKEFKKWVDRRVNVL---------VAD 425
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---------DQT 336
G D VS ++ SC DL++CDE HRLK+ D
Sbjct: 426 GTD-----------YRVSSFLRKVVKELASCIPPIDLIVCDEGHRLKSKDNKTIKMFDML 474
Query: 337 LTNR-------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
T R NDL E++AMVNF PG+LG + F ++YE I+ R P + ++ +LG
Sbjct: 475 KTQRRIRTPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRTPNCSAKDVELGR 534
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER+++L+ +F+LRRT A+L N+LPPK V+ + LQ + ++ + V I
Sbjct: 535 ERANDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSNLLDPNIVGSFIR 594
Query: 450 EETKQSKILAYITALKKLCNHPKLIY----DTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
QS LA I ++K+ N P L+ + ++ + + I P
Sbjct: 595 GYGAQS--LALIDLMRKISNSPMLLKRRDDELARANDDLGSATSAAISAIP--------- 643
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
+ + V SGKM +L ++L + Q T++++V+VSN+T TLDL LC+ +RY YLR
Sbjct: 644 --SDANINDVTTSGKMLMLDKMLHSIYQCTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLR 701
Query: 566 LDGTTSISKRQKLVNHFN-DPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
LDG+T +RQ+LV+ FN D + E FVFLLS+KAGG GLNLIGG+RL+LFD DWNP+ D
Sbjct: 702 LDGSTPPKQRQELVDRFNKDKGRQESFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTD 761
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSATQGNF 682
QA AR+ RDGQK+ V+IYRFL+T I+EK+YQRQ++K GL +++ Q +T+ ++ +F
Sbjct: 762 LQAMARIHRDGQKRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRTEKQTSKDSF 821
Query: 683 LSTEDLRDLFTFHDDVRS---EIHENMHCTRCQNYDDGAESIGEGDETNSA---NKNDQS 736
S +LRD+FT +VR+ + H+ + C + I EG+ + N +++S
Sbjct: 822 -SAAELRDIFTL--NVRTDGCQTHDLLGCQCTRKPVGETRDIAEGEHNSKVLPDNASEES 878
Query: 737 DQEVTDIGGFA 747
D + D F
Sbjct: 879 DSDENDHPTFV 889
>gi|328786654|ref|XP_624551.3| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
mellifera]
Length = 821
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/681 (35%), Positives = 357/681 (52%), Gaps = 84/681 (12%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
P + P V + +N N ++VD LV LRPHQR G+ F++EC+ GL G
Sbjct: 197 PFIMPSVNISRDCKKNMLQNEQEVSVDTCLVNVLRPHQRHGIVFLYECIMGL-KVPNYFG 255
Query: 211 CILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GR 269
ILAD+MGLGKTLQ I +++TLL +G G P++K +IVTP+SL +NW E K W+G R
Sbjct: 256 AILADEMGLGKTLQCITIIWTLLKKGPYGYPILKYVLIVTPSSLCNNWNKEFKHWLGFHR 315
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ + + + +F + ++I+SYE + + + DL+ICDE H
Sbjct: 316 ISPYVVNAKNKPN------NFKKQIRN-SIMIISYEMLIKYQQEIE-QIAFDLIICDEGH 367
Query: 330 RLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN+ + L+N +NDL+EFFA+++F NP ILG ++ F+ YYE
Sbjct: 368 RLKNNDIKTTKVLSNLNCKRRILLTGTPVQNDLQEFFALIDFVNPVILGSSSEFKNYYEK 427
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ + P A+ LG ER++EL K FILRRT +++ +LP K V+ C+L+
Sbjct: 428 PIVASQCPNASCHVISLGTERANELHEKTKCFILRRTQEIINKYLPSKHELVIFCRLSDE 487
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q +LY+ + K + L ITALKK+CNHP+L Y+ ++
Sbjct: 488 QEDLYSRITNLWFSKSVLPNNNISH--LTLITALKKICNHPELFYNEKNDLYLNKVSIKN 545
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
R G + GK+ ++ L+ +L+ +T++++VL+S YTQTLD
Sbjct: 546 I----------TRKGYY-----------GKISIVQTLIKNLK-KTNEKLVLISYYTQTLD 583
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
L ++C +LRLDG T+ S R K++ FN + N +FLLS+KAGG GLNL G +R
Sbjct: 584 LLERVCNMECLQFLRLDGNTTSSTRSKIIEQFNSTNDNNKIFLLSAKAGGVGLNLPGASR 643
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+LFD DWNPA+D QA AR+WRDGQK V+I R L+TGTIEEK++QRQ++K L + +
Sbjct: 644 LILFDSDWNPASDSQAMARIWRDGQKNDVYILRLLTTGTIEEKIFQRQINKANLSETVID 703
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
SS LST DL+DLFT + S H+ M C+ C Y E E + N+
Sbjct: 704 LNYFSSIK----LSTSDLKDLFTLTTNTNSLTHDLMKCS-CNGYKTSEEISKESHQENNR 758
Query: 731 NKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQ- 789
++ ++ L W H Y +P+ I+Q
Sbjct: 759 EYQFLIKDKIPNVKNLTI--------------------NQLLKWEH--YQQPIPNKIIQE 796
Query: 790 ---ASAGDEVTFVFTNQVDGK 807
+ D +TF+ N + K
Sbjct: 797 IMLSEVSDNITFILKNSILNK 817
>gi|299751759|ref|XP_002911684.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
gi|298409521|gb|EFI28190.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
Length = 1055
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/593 (40%), Positives = 329/593 (55%), Gaps = 76/593 (12%)
Query: 171 LVPITVDPLLVRFLRPHQREG----VQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+VP+ +DP+L R +RPHQ EG V FM+ECV GL G +GCILAD+MGLGKTLQ+I
Sbjct: 334 VVPVVLDPILARRMRPHQIEGTVICVSFMYECVMGLRKHEG-NGCILADEMGLGKTLQTI 392
Query: 227 ALLYTLLCQG-FDGK-PMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDV 283
AL++TLL Q + G P+ KKA+IV P SL++NW+AE KW+G RV + + D
Sbjct: 393 ALVWTLLKQNPYSGAGPIAKKALIVCPVSLITNWKAEFHKWLGRDRVGITVV-----DKE 447
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCS-ESCDLLICDEAHRLKNDQTLTN--- 339
ID+F + VLI+ YE R +K S S DL+ICDE HRLK+ T
Sbjct: 448 KVNIDAFFY-NKTQHVLIIGYERLRTVINKVSTSVPPIDLIICDEGHRLKSANNKTTAMF 506
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL EF AM F NPG+L + F+R YET I+ R P AT +
Sbjct: 507 KALRTRRRIILSGTPIQNDLSEFHAMTEFCNPGLLDEYPVFKRVYETPILKSRAPEATAK 566
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPK------------IIE-----VVCCK 426
E ++G R+ L N F+LRR LL HLPPK +I VV
Sbjct: 567 EIEVGEARTESLLQVANSFVLRRDATLLKKHLPPKRRCIAYIRMDQYLIPFPDEYVVFVT 626
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT- 485
T LQ +++ + + + S T +S LA I L K+ N P L+ T S T
Sbjct: 627 PTRLQISMFSAILRPERIDDLASGSTAES--LALINILTKISNSPILLKATADSYKARTG 684
Query: 486 ---------TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
G ++ +R P G + + LSGK+ VLA++L +R T+
Sbjct: 685 DKESSCLERAGVKEALRLMP-----------EGAQVSDMTLSGKLIVLAKMLKDIRNNTE 733
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS-KNEFVFLLS 595
++ V+VS++T TL++ C++ Y + RLDG T KRQ+ VN FN S + FVFLLS
Sbjct: 734 EKCVVVSHFTSTLNILEAFCQQAGYSFYRLDGQTPQQKRQEYVNAFNKSSQRGGFVFLLS 793
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
SKAGG G+NLIGG+RL L D DWNP++D QA AR RDGQK+ VFIYR ++ GTI+EK++
Sbjct: 794 SKAGGVGINLIGGSRLFLIDSDWNPSHDLQAMARCHRDGQKRPVFIYRLVTAGTIDEKIF 853
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
QRQ++K GL + D SA++ + S +DLRD+F + H+ + C
Sbjct: 854 QRQITKLGLSASLIG-SADGSASKSDSFSKKDLRDIFRIDPNTSCNTHDLLEC 905
>gi|189209013|ref|XP_001940839.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976932|gb|EDU43558.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 893
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/603 (39%), Positives = 338/603 (56%), Gaps = 61/603 (10%)
Query: 138 VENNVI-EENFTLP-PGVDP-----LVLWQPEE-PQNDGGNLVPITVDPLLVRFLRPHQR 189
+ N VI + N ++P P DP L++ +P+ P+ G +V + VDP+L + LR HQR
Sbjct: 198 LSNTVIPQRNPSIPQPRHDPHAPNALIMKRPDSCPK--GKQIVDVVVDPVLSKHLREHQR 255
Query: 190 EGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAI 247
+GVQF++ECV G+ G I+AD+MGLGKTLQ+IALL+TL+ Q P++KKA+
Sbjct: 256 DGVQFLYECVMGMRCEG--EGAIMADEMGLGKTLQTIALLWTLMKQNPIHGASPVIKKAL 313
Query: 248 IVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
IV P LV NW+ E KKW+G R+ + L D I +FT S +LIV YE
Sbjct: 314 IVCPAGLVDNWKREFKKWLGNERIGVYVL-----DAKNKKIANFTM-GKSYNILIVGYEM 367
Query: 307 FRMHSSKFSCSESCDLLICDEAHRLK--NDQTL-------TNR----------NDLEEFF 347
R++ + D++I DE HRLK N++ + T R NDL EF+
Sbjct: 368 LRVYQEELKRGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGTPLQNDLGEFY 427
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
++F NPG+LG A F+R +E II R+P A+E + + G R EL + +QF++RRT
Sbjct: 428 TAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESDLEKGEARWKELVSLTSQFMIRRT 487
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
+LS +LPPK +V C+ T Q+E Y + S + A+ L I LKK+
Sbjct: 488 AEVLSKYLPPKTEHIVFCRPTKGQAEAYRAVLDSPTFRLAMGSS---DIALQLINVLKKI 544
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CN P L+ + + + + + + P + + + S K+ +L L
Sbjct: 545 CNSPSLLKSSKDNDDTPSEMLQSILPLIPNNILNSSASS------------AKLRLLDSL 592
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PS 586
+ + T+++IV+VSNYT TLD+ +L Y YLRLDG+T SKRQ LV FN P
Sbjct: 593 VHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTYLRLDGSTPASKRQALVEKFNKTPK 652
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
F FLLS+K+GG GLNLIG +R+VLFD DWNPA D QA AR+ RDGQK +YRFL
Sbjct: 653 TTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLV 712
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
G ++EK+YQRQ+ K GL + D+ A+ +F S E+LRDLF + + H+
Sbjct: 713 QGGLDEKIYQRQIMKMGLANAV----VDNKASASSF-SQEELRDLFRLDERDGCQTHDIS 767
Query: 707 HCT 709
CT
Sbjct: 768 GCT 770
>gi|330936688|ref|XP_003305493.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
gi|311317475|gb|EFQ86421.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/602 (38%), Positives = 336/602 (55%), Gaps = 61/602 (10%)
Query: 138 VENNVI-EENFTLP-PGVDP-----LVLWQPEE-PQNDGGNLVPITVDPLLVRFLRPHQR 189
+ N V+ + N ++P P DP L++ +P+ P+ G +V + VDP+L + LR HQR
Sbjct: 195 LSNTVMPQRNLSIPQPRHDPHVPNALIMKRPDSCPK--GKQIVDVVVDPVLSKHLREHQR 252
Query: 190 EGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAI 247
+GVQF++ECV G+ G I+AD+MGLGKTLQ+IALL+TL+ Q P++KKA+
Sbjct: 253 DGVQFLYECVMGMRCEG--EGAIMADEMGLGKTLQTIALLWTLMKQNPIHGASPVIKKAL 310
Query: 248 IVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
IV P LV NW+ E KKW+G R+ + L D I +FT S +LIV YE
Sbjct: 311 IVCPAGLVDNWKREFKKWLGNERIGVYVL-----DAKNKKIANFTM-GKSYNILIVGYEM 364
Query: 307 FRMHSSKFSCSESCDLLICDEAHRLKND--------QTLTN-----------RNDLEEFF 347
R++ + D++I DE HRLK Q+L +NDL EF+
Sbjct: 365 LRVYQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGTPLQNDLGEFY 424
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
++F NPG+LG A F+R +E II R+P A+E E + G R EL + ++F++RRT
Sbjct: 425 TAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESELEKGEARWKELVSLTSRFMIRRT 484
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
+LS +LPPK +V C+ T Q+E Y + S + A+ L I LKK+
Sbjct: 485 AEVLSKYLPPKTEHIVFCRPTKGQAEAYRAILDSPTFRLAMGSS---DIALQLINVLKKI 541
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CN P L+ + + + + + + P + + + S K+ +L L
Sbjct: 542 CNSPSLLKSSKDNDDTPSEMLQSILPLIPNNILNSSASS------------AKLRLLDSL 589
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PS 586
+ + T+++IV+VSNYT TLD+ +L Y YLRLDG+T SKRQ LV FN P
Sbjct: 590 VHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTYLRLDGSTPASKRQALVEKFNKTPK 649
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
F FLLS+K+GG GLNLIG +R+VLFD DWNPA D QA AR+ RDGQK +YRFL
Sbjct: 650 TTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLV 709
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
G ++EK+YQRQ+ K GL + D+ A+ +F S E+LRDLF + + H+ +
Sbjct: 710 QGGLDEKIYQRQIMKMGLANAV----VDNKASASSF-SQEELRDLFRLDERDGCQTHDIL 764
Query: 707 HC 708
C
Sbjct: 765 GC 766
>gi|119186353|ref|XP_001243783.1| hypothetical protein CIMG_03224 [Coccidioides immitis RS]
gi|392870497|gb|EAS32304.2| dsDNA-dependent ATPase [Coccidioides immitis RS]
Length = 964
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/644 (40%), Positives = 355/644 (55%), Gaps = 76/644 (11%)
Query: 141 NVIEENFTLP--------PGVDP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPH 187
N ++E+ LP P DP +V+ +PE G +V + VDPLL + LR H
Sbjct: 255 NPLKEDSVLPSKPNKEVTPRHDPNQPGAIVMKRPESVPK-GKQIVDVVVDPLLGKHLREH 313
Query: 188 QREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKK 245
QREGV+ ++ECV G+ G G ILAD+MGLGKTLQ+IALL+TL+ Q + P+VKK
Sbjct: 314 QREGVKLLYECVMGMRPFNG-EGAILADEMGLGKTLQTIALLWTLMKQNPIYGASPVVKK 372
Query: 246 AIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR---DDVVSGIDSFTDPCSSLQVLIV 302
A+IV P +L+ NW+ E +KW+G + + + D G+ S V+I+
Sbjct: 373 ALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGM--------SYNVMII 424
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
YE R + + D++I DE HRLK Q + + NDL
Sbjct: 425 GYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDL 484
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
EFFAMV+F NPG+LG F + +E I+ R+P A++++ + G RS EL+ ++FI
Sbjct: 485 SEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFI 544
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRT +LS HLPPK ++ C TP Q+ +Y H I S + A+ + L IT
Sbjct: 545 LRRTADILSKHLPPKTEYILFCNPTPAQANIYRHVIASPIFQSALGDS---ESALQLITI 601
Query: 464 LKKLCNHPKLI-YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
LKKLCN P L+ +K NP T I PP + S + SGK+
Sbjct: 602 LKKLCNSPSLLTLKVLKDENPNCT-ISSLISTLPPNLLRHFSPAS----------SGKIR 650
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL +L T ++IVLVSNYT TL+L A L PYLRLDG+T SKRQ LV+ F
Sbjct: 651 VLDQLLHNLHSTTSEKIVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDF 710
Query: 583 N-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
N SK+ F FLLS+KAGG GLNL G +RLVLFD DWNPA D QA AR+ RDGQK+ I
Sbjct: 711 NRSSSKSCFAFLLSAKAGGIGLNLTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHI 770
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
YR L G +EEK++QRQ++K GL + +Q +S A S E+LRDLF +D +
Sbjct: 771 YRMLLRGGLEEKIWQRQVTKLGLADSV-MDQKNSVA----HFSREELRDLFRLDEDAECQ 825
Query: 702 IHENMHCTRCQNYDDGAESIGE-GD------ETNSANKNDQSDQ 738
H+ + C C A I + GD ++ S ++D SD+
Sbjct: 826 THDLLGC-ECGGRGKHASIIADVGDNGDKLSDSESPTESDDSDE 868
>gi|358370139|dbj|GAA86751.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus kawachii IFO 4308]
Length = 988
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/629 (40%), Positives = 341/629 (54%), Gaps = 70/629 (11%)
Query: 110 CARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGG 169
+RK V RP+L + LP T + + PG LV+ +P+ G
Sbjct: 215 ASRKGTVTGMYKRPLLESTV----LPPTPLEKPVPRHDPSQPGA--LVMKRPDSVPK-GK 267
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
+V + VDP L + LRPHQREGVQF++ECV G+ G G ILADDMGLGKTLQ+I LL
Sbjct: 268 QIVDVVVDPFLAKHLRPHQREGVQFLYECVMGMRPFNG-EGAILADDMGLGKTLQTITLL 326
Query: 230 YTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSG 286
+TLL Q D P+VKKA+IV P +L++NW E +KW+G R+ + DD
Sbjct: 327 WTLLKQNPVHDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVF-----DDKRKR 381
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
+ FT + V+IV YE R + S D+++ DE HRLK Q + +
Sbjct: 382 LTDFTR-GRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLN 440
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDL+EFFA V+ NPG+LG F R +E I+ R+P AT ++ +
Sbjct: 441 ATKRIILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEK 500
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G R+ EL ++F+LRRT +L+ +LPPK V+ CK T Q+ +Y + + S + A
Sbjct: 501 GEARNEELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSA 560
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-------GFEDCIRFFPPEMF 500
+ L IT LKKLCN P L+ + P T + +R F P
Sbjct: 561 LGNS---ESALQLITILKKLCNSPSLLTPRDVNEKPSETIAALLSSLPPNLLRHFTPSS- 616
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
S K+ VL +LL LR +T ++IVLVSNYT TL+L A L
Sbjct: 617 -----------------SAKLRVLDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLS 659
Query: 561 YPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
P+LRLDG+T KRQ LV FN PS F FLLS+KAGG GLNLIG +RLVLFD DWN
Sbjct: 660 LPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKAGGTGLNLIGASRLVLFDVDWN 719
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++K GL + E+ DS A
Sbjct: 720 PATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSV-MEKRDSVAQ- 777
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S ++L+DLF ++ + + HE + C
Sbjct: 778 ---FSRDELKDLFRLDEESKCQTHELLGC 803
>gi|158286564|ref|XP_308811.4| AGAP006945-PA [Anopheles gambiae str. PEST]
gi|157020528|gb|EAA04280.4| AGAP006945-PA [Anopheles gambiae str. PEST]
Length = 871
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 281/784 (35%), Positives = 395/784 (50%), Gaps = 105/784 (13%)
Query: 76 VLSVTEGAAVCRKP-----FKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITN 130
V+S T G+ +C FKPP D+ + AR P + P++ T
Sbjct: 138 VVSSTGGSKICLPVPSIGGFKPPVQVVRDDVEAE------ARSEASPRIDAVPLVDTTNF 191
Query: 131 RLDLPRTVENNVIEENFTL----PPGVDPLVLWQP---EEPQNDGGN--LVPITVDPLLV 181
D V+NN + FT V PL++ +P + Q++ N +V + V +
Sbjct: 192 SRDSSCRVQNN-FKSVFTTREDEQEAVQPLIMKKPSFEHQFQHNAQNEPVVEVQVPLCVT 250
Query: 182 RFLRPHQREGVQFMFECVSGL--LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
R LRPHQREGV F++ECV+GL L G G ILAD+MGLGKTLQ IAL+YTLL G G
Sbjct: 251 RHLRPHQREGVAFLYECVTGLRMLEPPGC-GAILADEMGLGKTLQCIALMYTLLKTGPYG 309
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV 299
KP+ K+ +IVTP+SLV NW+ EI KW+ ++ + + S P +
Sbjct: 310 KPLAKRVLIVTPSSLVDNWDREITKWLRSE-RIFTFIVGPNNKLKRYAQSPHIP-----I 363
Query: 300 LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----LTNR--------------- 340
LI+SYE + + DL+ CDE HRLKN + NR
Sbjct: 364 LIISYEMLAKQIGELE-TVKFDLMFCDEGHRLKNSNVKAFGVLNRLECRRRVLLTGTPIQ 422
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
NDL+EFF+++NF NPG +G F+ YET I+ + P + +LGIER +EL+A
Sbjct: 423 NDLQEFFSLINFVNPGAIGTYQDFKARYETPIVVSQRPGVLPQSIELGIERLNELNAITG 482
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL----YNHFIHSKNVKRAISEETKQSK 456
+F+LRRT +++ +LP K VV C + LQ++L + + K A+S
Sbjct: 483 RFVLRRTQEVINRYLPDKHEVVVFCHPSALQTQLTRTALSFYDSEKGADNAVSP------ 536
Query: 457 ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
L IT LKK+CNHP L+ K G+P + PP G + S
Sbjct: 537 -LQLITILKKICNHPSLVSVQGK-GDPESL-VHLLAEQLPPWQRMGPTDS---------- 583
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
K+ ++ LL + ++IV+VS Y++TLD+ LC Y Y RLDG+T+ R
Sbjct: 584 --AKLGIVEALLEAMLA-MQEKIVIVSYYSKTLDMIGGLCDHYNYKYCRLDGSTAGPDRS 640
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
++V FN+P+ + F+ LLS+KAGG GLNLIG +RLVL+D DWNPAND QA +RVWRDGQ+
Sbjct: 641 RIVAAFNNPANDSFILLLSAKAGGAGLNLIGASRLVLYDNDWNPANDLQAMSRVWRDGQR 700
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
K VFIYR L+ +IEE+++QRQ+SK L V+ Q Q S+ LS E+L+DLF+
Sbjct: 701 KPVFIYRLLTAYSIEERIFQRQISKTSLSGTVVDQRQNLSNLK----LSEEELKDLFSII 756
Query: 696 D---DVRSEIHENMHCTRCQNYDDGAESIGE--------GDETNSANKNDQSDQEVTDIG 744
D + H + C C + + + E D TN Q V G
Sbjct: 757 DPNAEADCLTHSLLECP-CAGIGNAPDRVAELPELCDPLDDLTNEPISRFQLRPTVGGGG 815
Query: 745 GFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMS--VPDAILQASAGDEVTFVFTN 802
L H LK E L W HH +S V + + A + DE+ F+F N
Sbjct: 816 KHGKLGTKKHALKMQE----------LMRWEHHRSPVSERVLEQLGLARSADEIVFLFRN 865
Query: 803 QVDG 806
V
Sbjct: 866 IVSA 869
>gi|295671388|ref|XP_002796241.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284374|gb|EEH39940.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 999
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 266/702 (37%), Positives = 373/702 (53%), Gaps = 72/702 (10%)
Query: 73 LPRVLSVTEGAAVCRKPFKPPCS--NGYDNGNDQLARRLCARKRFVPWGSSRP-----VL 125
+ R+ S T R P K +G D G +L + V P VL
Sbjct: 224 MSRISSATSTNGTIRLPPKTKIKREHGDDGGAKKLLNSAVPKSSAVKSAFKNPMKESTVL 283
Query: 126 VTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEE-PQNDGGNLVPITVDPLLVRFL 184
V N +PR N TLP V V+ +PE P+ G +V + +DPLL + L
Sbjct: 284 VQKPNGNPIPR--------HNPTLPGAV---VMRRPESVPK--GKEIVDVVLDPLLGKHL 330
Query: 185 RPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPM 242
R HQREGV+F++ECV G+ + G G ILAD+MGLGKTLQ+IAL++TLL Q ++ P+
Sbjct: 331 REHQREGVRFLYECVMGMRSFNG-EGAILADEMGLGKTLQTIALIWTLLKQNPIYEAPPV 389
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
+KKA+IV P +L+ NW+ E +KW+G + + ++ R + + FT S V+I+
Sbjct: 390 IKKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKR----TRLTDFT-MGQSYSVMII 444
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
YE R + S D++I DE HR++ Q + + NDL
Sbjct: 445 GYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQPLNTSKRVILSGTPIQNDL 504
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
EFFAMV+F NPGILG F + +E I+ ++P A + + + G RS EL++ + FI
Sbjct: 505 TEFFAMVDFVNPGILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKARSEELASLTSLFI 564
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRT LLS +LPPK V+ C T Q+ +Y H + S + A+ L IT
Sbjct: 565 LRRTADLLSKYLPPKTEYVLFCNPTSSQANIYRHVLSSPVFQCALGNS---DSALQLITI 621
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
LKKLCN P L+ KS + +T + P + R + SGK+ V
Sbjct: 622 LKKLCNSPSLL--NPKSSDEDSTSTLSSLVASLPSSITRRLTPAS---------SGKIRV 670
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL ++R T +++VL+SNYT TLDL +L +LRLDG+T +KRQ LV+ FN
Sbjct: 671 LDQLLHNIRHTTSEKVVLISNYTSTLDLLGKLLTSLSLSFLRLDGSTPAAKRQALVDDFN 730
Query: 584 DPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
S F FLLS+KAGG GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IY
Sbjct: 731 RSSSTSVFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIY 790
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEI 702
RFL G +EEK++QRQ++K GL + ++ S Q S E+LRDLF + +
Sbjct: 791 RFLLKGALEEKIWQRQVTKIGLADSVMDQK--SGVLQ---FSREELRDLFRLDEGATCQT 845
Query: 703 HENMHCTRCQNYDDGAESIGE--GDETNSANKNDQSDQEVTD 742
H+ + C C G E+ G +++D S+ E TD
Sbjct: 846 HDLLGC-ECDGR-GGQENFSHPNGSHIIDISESDHSENESTD 885
>gi|119494890|ref|XP_001264246.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri
NRRL 181]
gi|119412408|gb|EAW22349.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri
NRRL 181]
Length = 969
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 247/630 (39%), Positives = 344/630 (54%), Gaps = 74/630 (11%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
PG LV+ +P+ G +V + VDP+L + LR HQREGVQF++ECV G+ + G G
Sbjct: 256 PGA--LVMKRPDSVPK-GKQIVDVVVDPILSKHLRQHQREGVQFLYECVMGMRSFNG-EG 311
Query: 211 CILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
ILADDMGLGKTLQ+I LL+TLL Q + P++KKA+IV P +L++NW E +KW+G
Sbjct: 312 AILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWRKEFRKWLGN 371
Query: 269 -RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
R+ + DD + FT + V+IV YE R + D++I DE
Sbjct: 372 ERIGVFVF-----DDKRKRLTDFTM-GRAYSVMIVGYEKLRTVQEGLARGAGVDIIIADE 425
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLK Q + + NDL+EFFA V+ NPGILG+ F R +
Sbjct: 426 GHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPGILGNFKAFVREF 485
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ R+P AT++E + G R+ EL ++F+LRRT +L+ +LPPK V+ C T
Sbjct: 486 EGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTADILAKYLPPKTEYVLFCNPT 545
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-- 486
Q+ +Y + + S + AI L IT LKKLCN P L+ P T
Sbjct: 546 STQANIYKNVLASPVFQCAIGNS---ENALQLITILKKLCNSPSLLSPKTGDEKPSETIA 602
Query: 487 -----GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
+ +R F P S K+ VL +LL +LR T ++IVL
Sbjct: 603 ALLSSLPPNLLRHFSPS------------------CSAKIRVLDQLLHNLRTSTSEKIVL 644
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGG 600
VSNYT TL++ A L P+LRLDG+T KRQ LV FN P F FLLS+KAGG
Sbjct: 645 VSNYTSTLNMLANLLNSLSLPFLRLDGSTPAQKRQALVEDFNRLPPNLCFAFLLSAKAGG 704
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ +IYR L G++EE+++QRQ++
Sbjct: 705 TGLNLIGASRLVLFDVDWNPATDVQAMARIHRDGQKRHCWIYRVLLKGSLEERIWQRQVT 764
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC-------TRCQN 713
K GL + + + SS Q S ++L+DLF + R + HE + C +
Sbjct: 765 KIGLADSVMEHK--SSVAQ---FSRDELKDLFRLDEASRCQTHELLGCDCGGLGRMAGPS 819
Query: 714 YDDGAESIGEGDETNSANKNDQSDQEVTDI 743
DD + + +++ S++ +D +D E DI
Sbjct: 820 SDDASIPATDAEDSPSSDLSD-TDHEFPDI 848
>gi|396466336|ref|XP_003837669.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
gi|312214231|emb|CBX94225.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
Length = 938
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/601 (38%), Positives = 338/601 (56%), Gaps = 58/601 (9%)
Query: 138 VENNVI-EENFTLP-PGVDP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQRE 190
+ N V+ + N ++P P DP LV+ +P G +V + VDP+L + LR HQRE
Sbjct: 240 LSNTVMAQRNASIPQPRHDPNAENALVMKRPNSCPA-GKQIVDVVVDPVLSKHLRDHQRE 298
Query: 191 GVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAII 248
GV+F++ECV G+ G I+AD+MGLGKTLQ+IAL++TLL Q P+V KA+I
Sbjct: 299 GVKFLYECVMGMRCEG--EGAIMADEMGLGKTLQTIALIWTLLKQNPIHGSSPVVNKALI 356
Query: 249 VTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF 307
V P LV NW+ E +KW+G R+ L + C R + FT + V+IV YE
Sbjct: 357 VCPAGLVDNWKREFRKWLGNERIGLFS-CHKDRK-----VTDFTM-GKAYNVMIVGYEML 409
Query: 308 RMHSSKFSCSESCDLLICDEAHRLKND--------QTLTN-----------RNDLEEFFA 348
R+ + D++I DE HRLK Q+L+ +NDL EF+
Sbjct: 410 RVVQEDLKKAGGIDIVIADEGHRLKTANNKAMLAIQSLSTERRVILSGTPLQNDLGEFYT 469
Query: 349 MVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTN 408
++F NPG+LG + F+R +E I+ R+P ATE E + G R EL + +QF++RRT
Sbjct: 470 AIDFVNPGLLGQRSAFKRTFEAPIMRSRQPDATESELEKGEARWKELVSLTSQFMIRRTA 529
Query: 409 ALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLC 468
+L+ +LPPK +V CK T Q+E Y + + S A+ L I LKK+C
Sbjct: 530 NVLAKYLPPKTEHIVFCKPTRAQAEAYRNILTSPIFSAALGN-GNSDMALQLINVLKKVC 588
Query: 469 NHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLL 528
N P L+ + + + + + + PP++ + + S K+ +L L+
Sbjct: 589 NSPSLLKSSTDNDDTPSALLQTLLPLIPPQILNSSASS------------TKLRLLDSLV 636
Query: 529 GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
+ TD++IV+VSNYT TLD+ +L Y YLRLDG+T +KRQ LVN FN SK+
Sbjct: 637 HRIHTTTDEKIVIVSNYTTTLDMIERLLTSLSYTYLRLDGSTPAAKRQPLVNKFNTSSKS 696
Query: 589 -EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
F FLLS+K+GG G+NLIG +R+VLF+ DWNPA D QA AR+ R+GQK IYRFL
Sbjct: 697 TAFAFLLSAKSGGVGINLIGASRIVLFECDWNPATDLQAMARIHREGQKLPCKIYRFLIK 756
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
G ++EK+YQRQ+SK GL + D+ A+ +F S E+LRDLF + + H+ +
Sbjct: 757 GGLDEKIYQRQVSKMGLAGAV----VDNKASASSF-SREELRDLFRLDERAGCQTHDLLG 811
Query: 708 C 708
C
Sbjct: 812 C 812
>gi|425775549|gb|EKV13810.1| DsDNA-dependent ATPase (Rad54b), putative [Penicillium digitatum
PHI26]
gi|425783707|gb|EKV21537.1| DsDNA-dependent ATPase (Rad54b), putative [Penicillium digitatum Pd1]
Length = 1502
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 256/618 (41%), Positives = 340/618 (55%), Gaps = 49/618 (7%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P V LV+ +P+ G +V + VDPLL + LRPHQREGV+F++ECV G+ G
Sbjct: 772 PKAVGALVMPRPKSVPK-GRQVVDVVVDPLLAKNLRPHQREGVKFLYECVMGMRPFNG-E 829
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
G ILADDMGLGKTLQ+IALL+TLL Q F+ P++KKA+IV P +L++NW E +KW+G
Sbjct: 830 GAILADDMGLGKTLQTIALLWTLLKQNPVFEAPPVIKKALIVCPVTLINNWRKEFRKWLG 889
Query: 268 G-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
R+ + DD + FT + ++IV YE R + S D++I D
Sbjct: 890 SERIGVFVF-----DDKSKRLTDFTK-GRAYSIMIVGYEKLRTVQEALANSSGVDIIIAD 943
Query: 327 EAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLK Q + + NDL EFFA V+ NPGILG+ F R
Sbjct: 944 EGHRLKTLQNKSGQAIQSLSAVKRVILSGTPIQNDLREFFAAVDLVNPGILGNFKSFIRE 1003
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+ET I+ R+P AT +E + G R EL ++F+LRRT +L+ +LPPK V+ CK
Sbjct: 1004 FETPIVRSRQPEATRKEIEKGESRGEELRELTSKFMLRRTADILAKYLPPKTEYVLFCKP 1063
Query: 428 TPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
T Q+ +Y + S + A+ L IT LKKL N P L+ P T
Sbjct: 1064 TRPQANIYKAVLTSPIFQTAMGNAESA---LQLITILKKLSNSPSLLTAKNNDDTPNET- 1119
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
I P + S S S K+ VL +LL +R +TD++IVLVSNYT
Sbjct: 1120 MSALIESIPQPLHRHLSPS----------SSAKIRVLDQLLDTMRNKTDEKIVLVSNYTS 1169
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLI 606
TL L A L PYLRLDG+T KRQ LV+ FN P+ + F FLLS+KAGG GLNLI
Sbjct: 1170 TLSLLATLLTSLGLPYLRLDGSTPAQKRQGLVDDFNRLPASSCFAFLLSAKAGGTGLNLI 1229
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G +RL+LFD DWNPA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++K GL
Sbjct: 1230 GASRLILFDVDWNPATDIQAMARIHRDGQKRPCRIYRVLLKGSLEEKIWQRQVTKLGLAD 1289
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE-GD 725
+ QE+ S+ G S +LRDLF +D + HE + C RC A+S
Sbjct: 1290 SVMQEKNTSNG--GAQFSAAELRDLFRLDEDRACQTHELLGC-RCSGRGVQADSQASLSG 1346
Query: 726 ETNSANKNDQSDQEVTDI 743
A + S EV D+
Sbjct: 1347 PATPATVDGGSGSEVEDL 1364
>gi|302659152|ref|XP_003021270.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
gi|291185160|gb|EFE40652.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
Length = 922
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/621 (39%), Positives = 346/621 (55%), Gaps = 62/621 (9%)
Query: 141 NVIEENFTLPPGV--------DP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPH 187
N ++++ LPPG DP +V+ +P G +V + VDP+L + LR H
Sbjct: 197 NPLKQSTVLPPGSSGQITPRHDPTLPGAVVMKRPSSVPA-GKQIVDVVVDPILGKHLREH 255
Query: 188 QREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKK 245
QREGV+F++ECV GL + G G ILAD+MGLGKTLQ+IAL++TLL Q + +P++KK
Sbjct: 256 QREGVKFLYECVMGLRHFNG-EGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKK 314
Query: 246 AIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYE 305
A+I P +L++NW+ E KKW+G ++ + +++S FT S V+I+ YE
Sbjct: 315 ALIACPVTLINNWKKEFKKWLGSD-RIGVFVADGKGNLLS---DFTM-GRSYSVMIIGYE 369
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
R + + DL++ DE HRLK Q + + N+L EF
Sbjct: 370 RLRSVQDQLTKGPGIDLVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQNELSEF 429
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
FAMV+F NP +LG F R +E I+ R+P A ++ + G RS EL+ + FILRR
Sbjct: 430 FAMVDFVNPALLGTFKSFMRDFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRR 489
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
T +LS HLPPK ++ C T Q +Y+H + S + + L IT LKK
Sbjct: 490 TADILSKHLPPKTEYILFCNPTSAQRSVYHHVLASPMFQSVLRNS---ESALQLITILKK 546
Query: 467 LCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
+CN P L+ ++ G T + PP + S G SGK+ VL
Sbjct: 547 VCNSPSLLKPKVEDNGKGEDTSMSALLSSLPPNIHR----SLAAGS------SGKIRVLD 596
Query: 526 RLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-D 584
+LL +L+ +T +++VLVSNYT TL+L A L P+LRLDG+T +KRQ LV FN
Sbjct: 597 QLLYNLQSKTKEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRS 656
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
PS + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IYR
Sbjct: 657 PSSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRL 716
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
L G IEEK++QRQ++K GL + ++ + S E+L+DLF + + + HE
Sbjct: 717 LLKGGIEEKIWQRQVTKLGLADSVMGQKGGIA-----HFSQEELKDLFRLDEISKCQTHE 771
Query: 705 NMHCTRCQNYDDGAESIGEGD 725
+ C +C + ++ I E D
Sbjct: 772 LLGC-KCGGLGEISKEIKEED 791
>gi|426197383|gb|EKV47310.1| hypothetical protein AGABI2DRAFT_204339 [Agaricus bisporus var.
bisporus H97]
Length = 966
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/569 (40%), Positives = 325/569 (57%), Gaps = 60/569 (10%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
++P+ VDP+L R +R HQREGV+F++ECV GL G GCILAD+MGLGKTLQ+IAL++
Sbjct: 318 IIPVVVDPILTRRMRDHQREGVKFLYECVMGLSKHEG-QGCILADEMGLGKTLQTIALVW 376
Query: 231 TLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
TLL Q P+VKK +IV P SL++NW +E KW+G RD V GI
Sbjct: 377 TLLKQNPYLGAGPVVKKVMIVCPVSLMNNWRSEFYKWLG------------RDRV--GIA 422
Query: 289 SFT-DPC--------SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
+++ DP S+ +LI+ YE R S DL+ICDE HRLK+ QT TN
Sbjct: 423 TYSKDPIELHGFKNSSAHPILIIGYERLR------SMVPQIDLIICDEGHRLKSSQTKTN 476
Query: 340 R-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+ NDL EF AM F NPG+L + FR +YE I+ R P A
Sbjct: 477 QMFKDFKTRRRIILSGTPIQNDLSEFHAMTEFCNPGLLENYPKFRSFYEVPILKSRSPDA 536
Query: 381 TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
+ +E ++G R+S+L ++LRR LL+N+LPPK VV TPLQ +++ +
Sbjct: 537 STKEIEIGEARTSQLLVVAKSYVLRRDANLLNNYLPPKHEYVVFISPTPLQLQIFRKILT 596
Query: 441 SKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF 500
S I + T ++ LA I K+ N P L+ K+ G E+ I F +
Sbjct: 597 SDRGDDIIEQNTT-AEALALIGIFTKISNSPILL----KAMAANAEGKENSI-FQKRNVA 650
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
G + LSGK+ L+ +L + + T+++ VLVS+YT TL++ C++++
Sbjct: 651 DATKLVPVGAQIEDMSLSGKLIALSNILKVVHETTEEKCVLVSHYTSTLNILEAFCKKKQ 710
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
Y Y RLDG T ++RQ VN FN + +N F+FLLSSKAGG G+NLIG +RL L D DWN
Sbjct: 711 YSYFRLDGQTPQAQRQGYVNSFNRSNQRNGFIFLLSSKAGGVGINLIGASRLFLVDSDWN 770
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
P++D Q+ AR RDGQK+ VFIYR L+ G I+EK+YQRQ++K L + ++A++
Sbjct: 771 PSHDIQSMARCHRDGQKRPVFIYRLLTAGAIDEKIYQRQLTKLALSDSLI--GGTANASK 828
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+ + DL+D+F H + S H+ + C
Sbjct: 829 SDTFTKRDLQDIFRIHVNTSSNTHDLLEC 857
>gi|302499754|ref|XP_003011872.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
gi|291175426|gb|EFE31232.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
Length = 921
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 247/643 (38%), Positives = 354/643 (55%), Gaps = 68/643 (10%)
Query: 141 NVIEENFTLPPGV--------DP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPH 187
N ++++ LPPG DP +V+ +P G +V + VDP+L + LR H
Sbjct: 197 NPLKQSTVLPPGSSGQITPRHDPTLPGAVVMKRPSS-VPPGKQIVDVVVDPILGKHLREH 255
Query: 188 QREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKK 245
Q+EGV+F++ECV GL G G ILAD+MGLGKTLQ+IAL++TLL Q + +P++KK
Sbjct: 256 QKEGVKFLYECVMGLRPFNG-EGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKK 314
Query: 246 AIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSY 304
A+IV P +L++NW+ E KKW+G R+ + D + + FT S V+I+ Y
Sbjct: 315 ALIVCPVTLINNWKKEFKKWLGSDRIGVFVA-----DGKGNRLSDFTM-GRSYSVMIIGY 368
Query: 305 ETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEE 345
E R + + D+++ DE HRLK Q +++ N+L E
Sbjct: 369 ERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSSQAIQSLNTTRRIILSGTPIQNELSE 428
Query: 346 FFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILR 405
FFAMV+F NP +LG F R +E I+ R+P A ++ + G RS EL+ + FILR
Sbjct: 429 FFAMVDFVNPALLGTFKSFMRDFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILR 488
Query: 406 RTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALK 465
RT +LS HLPPK ++ C T Q +Y+H + S + + L IT LK
Sbjct: 489 RTADILSKHLPPKTEYILFCNPTSAQRSVYHHVLASPMFQSVLRNS---ESALQLITILK 545
Query: 466 KLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVL 524
K+CN P L+ ++ G T + PP + + SGK+ VL
Sbjct: 546 KVCNSPSLLKPKVEDNGKGEDTSMSALLSSLPPNIHRCLAAGS----------SGKIRVL 595
Query: 525 ARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN- 583
+LL +L+ +T +++VLVSNYT TL+L A L P+LRLDG+T +KRQ LV FN
Sbjct: 596 DQLLYNLQSKTKEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNR 655
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
PS + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IYR
Sbjct: 656 SPSSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYR 715
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
L G IEEK++QRQ++K GL + D +F S E+L+DLF + + + H
Sbjct: 716 LLLKGGIEEKIWQRQVTKLGLADSVM----DQKGGIAHF-SQEELKDLFRLDEISKCQTH 770
Query: 704 ENMHCTRCQNYDDGAESIGEGD----ETNSANKNDQSDQEVTD 742
E + C C + ++ I + D E+ S + ++ D E+ D
Sbjct: 771 ELLGC-ECGGRGETSKDIKDEDNLRAESISVSSSEDEDHELED 812
>gi|326481938|gb|EGE05948.1| dsDNA-dependent ATPase [Trichophyton equinum CBS 127.97]
Length = 1004
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 249/642 (38%), Positives = 354/642 (55%), Gaps = 70/642 (10%)
Query: 141 NVIEENFTLPPGV--------DP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPH 187
N ++++ LPPG DP +V+ +P G +V + VDP+L + LR H
Sbjct: 197 NPLKQSTVLPPGSSGQITPRHDPTLPGAVVMKRPSSVPA-GKQIVDVVVDPILGKHLREH 255
Query: 188 QREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKK 245
QREGV+F++ECV GL G G ILAD+MGLGKTLQ+IAL++TLL Q + +P++KK
Sbjct: 256 QREGVKFLYECVMGLRPFNG-EGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKK 314
Query: 246 AIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYE 305
A+IV P +L++NW+ E KKW+G + + E + + FT S V+I+ YE
Sbjct: 315 ALIVCPVTLINNWKKEFKKWLGSDRIGVFVAEGKGNR----LSDFTM-GRSYSVMIIGYE 369
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
R + + D+++ DE HRLK Q + + N+L EF
Sbjct: 370 RLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQNELSEF 429
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
FAMV+F NP +LG F R +E I+ R+P A ++ + G RS EL+ + FILRR
Sbjct: 430 FAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRR 489
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI--SEETKQSKILAYITAL 464
T +LS HLPPK ++ C T Q +Y+H + S + + SE T L IT L
Sbjct: 490 TADILSKHLPPKTEYILFCNPTSAQRNVYHHVLASPLFQSVLRNSEST-----LQLITIL 544
Query: 465 KKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
KK+CN P L+ ++ G + I PP + + SGK+ V
Sbjct: 545 KKVCNSPSLLKPKVEDNGKGEDSSMSAFISSLPPNIHRCLAAGS----------SGKIRV 594
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL +L+ +T +++VLVSNYT TL+L A L P+LRLDG+T +KRQ LV FN
Sbjct: 595 LDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFN 654
Query: 584 -DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
PS + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IY
Sbjct: 655 RSPSSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIY 714
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEI 702
R L G IEEK++QRQ++K GL + D +F S E+L+DLF + + +
Sbjct: 715 RLLLKGGIEEKIWQRQVTKLGLADSVM----DQKGGIAHF-SQEELKDLFRLDESSKCQT 769
Query: 703 HENMHCTRCQNYDDGAESIGEGD----ETNSANKNDQSDQEV 740
HE + C C + ++ I E D E+ S + ++ D ++
Sbjct: 770 HELLGC-ECGGRGEMSKKIKEEDKLCAESTSVSSSEDEDPDL 810
>gi|327351086|gb|EGE79943.1| DsDNA-dependent ATPase [Ajellomyces dermatitidis ATCC 18188]
Length = 1011
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/597 (40%), Positives = 334/597 (55%), Gaps = 55/597 (9%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DPLL + LR HQREGV+F++ECV G+ G G ILAD+MGLGKTLQ+IA
Sbjct: 313 GKQVVDVVLDPLLGKHLREHQREGVKFLYECVMGMRAFNG-EGAILADEMGLGKTLQTIA 371
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q ++ +P+VKKA+IV P +L+ NW E +KW+G + + ++ R +
Sbjct: 372 LIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKR----T 427
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT S V+I+ YE R + S D++I DE HR++ Q + +
Sbjct: 428 RLTDFTM-GKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSL 486
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL EFFAMV+F NPG+LG F + +E I+ R+P A +++ +
Sbjct: 487 NTSRRIILSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIE 546
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ + FILRRT +LS +LPPK V+ C T Q +Y H + S +
Sbjct: 547 KGEARSEELANLTSLFILRRTADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQS 606
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A+ L IT LKKLCN P L+ P +T + PP + S S
Sbjct: 607 ALGN---SESALQLITILKKLCNSPSLLNPRNCDETPNST-LSALVSSLPPNILRHLSPS 662
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK+ VL +LL ++R T +++VL+SNYT TLDL A L P+LRL
Sbjct: 663 S----------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATLLTSLSLPFLRL 712
Query: 567 DGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T SKRQ LV+ FN S + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D Q
Sbjct: 713 DGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDMQ 772
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+ RDGQK+ IYR L G +EEK++QRQ++K GL + ++ S S
Sbjct: 773 AMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKKGVSQ-----FSR 827
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTD 742
E+L+DLF + + H+ + C C DG GEG+ + +K D D +D
Sbjct: 828 EELKDLFRLDEGTTCQTHDLLGC-EC----DGR---GEGETASKLHKGDIIDVSKSD 876
>gi|261201037|ref|XP_002626919.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
gi|239593991|gb|EEQ76572.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
Length = 999
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/597 (40%), Positives = 334/597 (55%), Gaps = 55/597 (9%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DPLL + LR HQREGV+F++ECV G+ G G ILAD+MGLGKTLQ+IA
Sbjct: 292 GKQVVDVVLDPLLGKHLREHQREGVKFLYECVMGMRAFNG-EGAILADEMGLGKTLQTIA 350
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q ++ +P+VKKA+IV P +L+ NW E +KW+G + + ++ R +
Sbjct: 351 LIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKR----T 406
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT S V+I+ YE R + S D++I DE HR++ Q + +
Sbjct: 407 RLTDFTM-GKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSL 465
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL EFFAMV+F NPG+LG F + +E I+ R+P A +++ +
Sbjct: 466 NTSRRIILSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIE 525
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ + FILRRT +LS +LPPK V+ C T Q +Y H + S +
Sbjct: 526 KGEARSEELANLTSLFILRRTADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQS 585
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A+ L IT LKKLCN P L+ P +T + PP + S S
Sbjct: 586 ALGN---SESALQLITILKKLCNSPSLLNPRNCDETPNST-LSALVSSLPPNILRHLSPS 641
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK+ VL +LL ++R T +++VL+SNYT TLDL A L P+LRL
Sbjct: 642 S----------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATLLTSLSLPFLRL 691
Query: 567 DGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T SKRQ LV+ FN S + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D Q
Sbjct: 692 DGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDMQ 751
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+ RDGQK+ IYR L G +EEK++QRQ++K GL + ++ S S
Sbjct: 752 AMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKKGVSQ-----FSR 806
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTD 742
E+L+DLF + + H+ + C C DG GEG+ + +K D D +D
Sbjct: 807 EELKDLFRLDEGTTCQTHDLLGC-EC----DGR---GEGETASKLHKGDIIDVSKSD 855
>gi|239607133|gb|EEQ84120.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis ER-3]
Length = 989
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/597 (40%), Positives = 334/597 (55%), Gaps = 55/597 (9%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DPLL + LR HQREGV+F++ECV G+ G G ILAD+MGLGKTLQ+IA
Sbjct: 292 GKQVVDVVLDPLLGKHLREHQREGVKFLYECVMGMRAFNG-EGAILADEMGLGKTLQTIA 350
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q ++ +P+VKKA+IV P +L+ NW E +KW+G + + ++ R +
Sbjct: 351 LIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKR----T 406
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT S V+I+ YE R + S D++I DE HR++ Q + +
Sbjct: 407 RLTDFTM-GKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSL 465
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL EFFAMV+F NPG+LG F + +E I+ R+P A +++ +
Sbjct: 466 NTSRRIILSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIE 525
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ + FILRRT +LS +LPPK V+ C T Q +Y H + S +
Sbjct: 526 KGEARSEELANLTSLFILRRTADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQS 585
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
A+ L IT LKKLCN P L+ P +T + PP + S S
Sbjct: 586 ALGN---SESALQLITILKKLCNSPSLLNPRNCDETPNST-LSALVSSLPPNILRHLSPS 641
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
SGK+ VL +LL ++R T +++VL+SNYT TLDL A L P+LRL
Sbjct: 642 S----------SGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATLLTSLSLPFLRL 691
Query: 567 DGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T SKRQ LV+ FN S + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D Q
Sbjct: 692 DGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDMQ 751
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+ RDGQK+ IYR L G +EEK++QRQ++K GL + ++ S S
Sbjct: 752 AMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKKGVSQ-----FSR 806
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTD 742
E+L+DLF + + H+ + C C DG GEG+ + +K D D +D
Sbjct: 807 EELKDLFRLDEGTTCQTHDLLGC-EC----DGR---GEGETASKLHKGDIIDVSKSD 855
>gi|336371187|gb|EGN99526.1| hypothetical protein SERLA73DRAFT_72346 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383951|gb|EGO25099.1| hypothetical protein SERLADRAFT_436866 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1121
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/604 (39%), Positives = 333/604 (55%), Gaps = 93/604 (15%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+VP+ +DP++ R+LRPHQ EGV+F+++CV GL G GCILAD+MGLGKTLQ+I L++
Sbjct: 375 IVPVVLDPIIARYLRPHQVEGVRFLYDCVMGLRKHEG-QGCILADEMGLGKTLQTIMLVW 433
Query: 231 TLLCQG-FDG-KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
TLL Q + G P++ KA+IV P SLV+NW AE KW+G + + +D V I
Sbjct: 434 TLLKQNPYAGVGPVIGKALIVCPVSLVNNWRAEFHKWLGR--DRVGVFTGDKDKAV--IK 489
Query: 289 SFTDPCSSL------------------QVLIVSYETFRMHSSKFS-CSESCDLLICDEAH 329
F + C L QVLI+ YE R + + C+ L+ICDE H
Sbjct: 490 QFINSCVKLLLWLSPIKNRRAHYRRIHQVLIIGYERLRTVIADLAYCNPPIGLIICDEGH 549
Query: 330 RLK--NDQTLTN-----------------RNDLEEFFAMV----------------NFTN 354
RLK N++T T +NDL EF AMV +F N
Sbjct: 550 RLKSANNKTSTMFRALRTPRRIILSGTPIQNDLSEFHAMVRFIFSSEFFLLDKAQADFCN 609
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
PG+L D FRR YE I+ R P T+++ ++G RSS+LS F+LRR +L N+
Sbjct: 610 PGLLDDYTTFRRVYEVPILRSRAPDCTDKDTEIGEARSSQLSTIAKSFVLRREATILKNY 669
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LPPK VV T LQ +++ +++ + I T +S LA I L K+ N P L+
Sbjct: 670 LPPKHEYVVFVTPTRLQLSIFSTILNADKLDNIIQSSTAES--LALINVLTKVSNSPILL 727
Query: 475 YDTI-KSGNPGTT-----GFEDCIRFFPPEMFSGRSGSWTGGDGAWVE---LSGKMHVLA 525
T K+ G G E+ ++ P A +E LSGK+ L+
Sbjct: 728 KATADKAKALGNNSFKQRGIEEALKLLPGH--------------AQIEDFSLSGKLSALS 773
Query: 526 RLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP 585
LL +R+ TD++ ++VS+YT TL++ C ++ Y Y RLDG T +KRQ+ VN FN
Sbjct: 774 NLLKTIREYTDEKCIIVSHYTSTLNIIEAFCMKKSYTYFRLDGQTPAAKRQEYVNIFNKS 833
Query: 586 SK-NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
S+ + F+FLLSSKAGG GLNLIG +RL L D DWNP++D Q+ AR+ RDGQK+ VFIYRF
Sbjct: 834 SQYSRFLFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMARIHRDGQKRPVFIYRF 893
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
L+ EK+YQRQ++K GL + T S ++ + S +DLRD+F H + H+
Sbjct: 894 LTA----EKIYQRQVTKIGLSNSLMGSGT--SGSKSDSFSRKDLRDIFRIHPNTACNTHD 947
Query: 705 NMHC 708
+ C
Sbjct: 948 LLEC 951
>gi|326473366|gb|EGD97375.1| dsDNA-dependent ATPase [Trichophyton tonsurans CBS 112818]
Length = 922
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 247/641 (38%), Positives = 352/641 (54%), Gaps = 68/641 (10%)
Query: 141 NVIEENFTLPPGV--------DP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPH 187
N ++++ LPPG DP +V+ +P G +V + VDP+L + LR H
Sbjct: 197 NPLKQSTVLPPGSSGQITPRHDPTLPGAVVMKRPSSVPA-GKQIVDVVVDPILGKHLREH 255
Query: 188 QREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKK 245
QREGV+F++ECV GL G G ILAD+MGLGKTLQ+IAL++TLL Q + +P++KK
Sbjct: 256 QREGVKFLYECVMGLRPFNG-EGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKK 314
Query: 246 AIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSY 304
A+IV P +L++NW+ E KKW+G R+ + D + + FT S V+I+ Y
Sbjct: 315 ALIVCPVTLINNWKKEFKKWLGSDRIGVFVA-----DGKGNRLSDFTM-GRSYSVMIIGY 368
Query: 305 ETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEE 345
E R + + D+++ DE HRLK Q + + N+L E
Sbjct: 369 ERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQNELSE 428
Query: 346 FFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILR 405
FFAMV+F NP +LG F R +E I+ R+P A ++ + G RS EL+ + FILR
Sbjct: 429 FFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILR 488
Query: 406 RTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALK 465
RT +LS HLPPK ++ C T Q +Y+H + S + + L IT LK
Sbjct: 489 RTADILSKHLPPKTEYILFCNPTSAQRNVYHHVLASPLFQSVLRN---SESALQLITILK 545
Query: 466 KLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVL 524
K+CN P L+ ++ G + I PP + + SGK+ VL
Sbjct: 546 KVCNSPSLLKPKVEDNGKGEDSSMSAFISSLPPNIHRCLAAGS----------SGKIRVL 595
Query: 525 ARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN- 583
+LL +L+ +T +++VLVSNYT TL+L A L P+LRLDG+T +KRQ LV FN
Sbjct: 596 DQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNR 655
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
PS + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IYR
Sbjct: 656 SPSSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYR 715
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
L G IEEK++QRQ++K GL + D +F S E+L+DLF + + + H
Sbjct: 716 LLLKGGIEEKIWQRQVTKLGLADSVM----DQKGGIAHF-SQEELKDLFRLDESSKCQTH 770
Query: 704 ENMHCTRCQNYDDGAESIGEGD----ETNSANKNDQSDQEV 740
E + C C + ++ I E D E+ S + ++ D ++
Sbjct: 771 ELLGC-ECGGRGEMSKKIKEEDKLCAESTSVSSSEDEDPDL 810
>gi|452002263|gb|EMD94721.1| hypothetical protein COCHEDRAFT_1167819 [Cochliobolus
heterostrophus C5]
Length = 888
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/565 (39%), Positives = 316/565 (55%), Gaps = 51/565 (9%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP+L + LR HQREGVQF++ECV G+ G I+AD+MGLGKTLQ+I
Sbjct: 234 GKQIVDVVVDPVLSKHLRDHQREGVQFLYECVMGMRCEG--EGAIMADEMGLGKTLQTIT 291
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVV 284
LL+TL+ Q D P++KKA+IV P LV NW+ E +KW+G RV + L D
Sbjct: 292 LLWTLMKQNPIHDSPPVIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVL-----DAKN 346
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND--------QT 336
I +FT S ++IV YE R+ + D++I DE HRLK Q+
Sbjct: 347 KKIANFTM-GKSYNIMIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQS 405
Query: 337 LTN-----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
L +NDL EF+ ++F NPG+LG F+R +E I+ R+P A+E E
Sbjct: 406 LNTERRIILSGTPLQNDLGEFYTAIDFVNPGLLGQRTAFKRSFELPIMRSRQPDASEAEL 465
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G R EL + +QF++RRT +LS +LPPK +V C+ T Q+E Y + S +
Sbjct: 466 EKGEARWKELVSLTSQFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILDSPTFR 525
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
A+ L I LKK+CN P L+ + + + + + I P ++ + +
Sbjct: 526 LALGS---TDIALQLINVLKKVCNSPSLLKSSKDNDDTPSEMLQSIIPLIPSKILNSSAS 582
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
S K+ +L L+ + T+++IV+VSNYT TLD+ +L Y +LR
Sbjct: 583 S------------AKLRLLDSLVHSIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTFLR 630
Query: 566 LDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
LDG+T SKRQ L+ FN P F FLLS+K+GG GLNLIG +R+VLFD DWNPA D
Sbjct: 631 LDGSTPASKRQSLIEKFNKTPKTTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDL 690
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA AR+ RDGQK +YRFL G ++EK+YQRQ+ K GL + D+ A+ +F S
Sbjct: 691 QAMARIHRDGQKLPCKVYRFLVQGGLDEKIYQRQVMKMGLANAV----VDNKASASSF-S 745
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCT 709
E+LRDLF + + H+ + CT
Sbjct: 746 QEELRDLFRLDEREGCQTHDLLGCT 770
>gi|392568778|gb|EIW61952.1| hypothetical protein TRAVEDRAFT_57102 [Trametes versicolor
FP-101664 SS1]
Length = 1083
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/637 (37%), Positives = 347/637 (54%), Gaps = 72/637 (11%)
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDG 239
R LRPHQREGVQF++ECV GL G G ILAD+MG+GKTLQ+IAL++TLL Q + G
Sbjct: 391 ARHLRPHQREGVQFLYECVMGLRKHEG-QGSILADEMGMGKTLQTIALVWTLLKQNPYAG 449
Query: 240 K-PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ 298
P+V K +IV P SL++NW+ E KW+G + + + + + ++S Q
Sbjct: 450 AGPVVGKVLIVCPVSLINNWKNEFHKWLGKDRVGVFVGDKNKSTIKQFLNSRIH-----Q 504
Query: 299 VLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLK--NDQTLTN---------------- 339
VL++ YE R + C+ L++CDE HRLK N++T T
Sbjct: 505 VLVIGYERLRTVIDDLAYCNPPIGLIVCDEGHRLKSANNKTSTMFEALRTPRRVILSGTP 564
Query: 340 -RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
+N+L EF AM +F NPG+L D + F+R YET I+ R P + +E +LG RS++L+A
Sbjct: 565 IQNELSEFHAMADFCNPGLLDDYSTFKRVYETPILKSRAPGCSSKEAELGEARSAQLTAI 624
Query: 399 VNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKIL 458
F+LRR +L +LP K VV T LQ ++ + S + + T +S L
Sbjct: 625 AKSFVLRREATMLKKYLPAKHEYVVFITPTKLQLAIFEKILSSDKLDNLVRSSTAES--L 682
Query: 459 AYITALKKLCNHPKLIYDT-----IKSGNPGTT----GFEDCIRFFPPEMFSGRSGSWTG 509
A I L K+ N P L+ T +K+ G ED ++ P +G
Sbjct: 683 ALINMLTKISNSPILLKATADQARLKAQQGGDVVKRNAIEDALKLLP-----------SG 731
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
V LSGK+ LA LL L + T+++ ++VS+YT TL++ C+++ Y Y RLDG+
Sbjct: 732 AQIEDVALSGKLSALATLLRALHKHTEEKCIIVSHYTSTLNIIEAYCKKKSYTYHRLDGS 791
Query: 570 TSISKRQKLVNHFNDPSK-NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
T +KRQ VN FN S+ FVFLLSSKAGG GLNLIG +RL L D DWNP++D Q+ A
Sbjct: 792 TPAAKRQDYVNDFNRSSQAKRFVFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMA 851
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R+ RDGQK+ V+IYRFL+TG+I+EK+YQRQ++K GL + Q SS ++ + + +DL
Sbjct: 852 RIHRDGQKRPVYIYRFLTTGSIDEKIYQRQVTKLGLSDLSQ----GSSESKSDSFTRKDL 907
Query: 689 RDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAG 748
D+FT + H+ + C C+ D+ +E + A+ + SD++ + GF
Sbjct: 908 LDIFTINPHTACNTHDLLDCP-CEASDEAEPKPITREEMDEASSS--SDEDEDPVKGFMA 964
Query: 749 LAGCLHK---------LKSSEKQLGTPLEEDLNNWGH 776
+ K +K QL L W H
Sbjct: 965 ASQVTTKDVNKMDKAYMKQKRAQLAA-----LGEWTH 996
>gi|358058721|dbj|GAA95684.1| hypothetical protein E5Q_02341 [Mixia osmundae IAM 14324]
Length = 2010
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/565 (40%), Positives = 318/565 (56%), Gaps = 53/565 (9%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ +DPLL + LRPHQ+EG+QFM+ECV G + GCILAD+MGLGKT+QSI L++TLL
Sbjct: 503 VVLDPLLCKHLRPHQKEGIQFMYECVMGFKSEG--TGCILADEMGLGKTVQSIGLIWTLL 560
Query: 234 CQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSF 290
Q ++ +A+IV P +LV NW E KW+G R+ + D S I SF
Sbjct: 561 KQTPYATSGSVIGRALIVCPVTLVKNWSREFSKWLGRERIGVFTA------DAKSNIKSF 614
Query: 291 TDPCSSLQVLIVSYETFRMHSSKF-SCSESCDLLICDEAHRLKNDQTLTNR--------- 340
T + VLI+ YE R CS ++ICDE HRLK+ T +
Sbjct: 615 TK-SKTYAVLIIGYERLRTVVEDLEKCSPPIGVIICDEGHRLKSAGAKTTQALRALSAEK 673
Query: 341 ----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIE 390
NDL E MV+F PG L A F++ +E I+ REP A+ E + LG
Sbjct: 674 RVILTGTPIQNDLSELHTMVDFIIPGALDSYATFKKCFEVPILKSREPHASSEVRGLGQA 733
Query: 391 RSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
RS +L++ F+LRRT+ +++ LPPK V+ + T LQ LY + + V+ S
Sbjct: 734 RSDQLASIARSFVLRRTSEVIAQFLPPKQEYVLFVRPTQLQIRLYKKILETPAVRAIFS- 792
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
K L I+ALKKLCN P L+ + + ED + E +G
Sbjct: 793 -GKGGNHLVLISALKKLCNSPGLLVKQLDQQH--VKDAEDEVTESIAEELP------SGL 843
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
D V LSGK LA LL ++++T++++VLVSN+TQTL++ C+ RRY Y RLDG T
Sbjct: 844 DVNDVHLSGKALALANLLESIKEKTEEKVVLVSNFTQTLNILEAFCKTRRYGYCRLDGAT 903
Query: 571 SISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
+ RQ +V FN S K +F+FLLSSK+GG GLNLIG +RLVLFD DWNP+ND QA AR
Sbjct: 904 AQKARQGIVETFNRASQKAQFIFLLSSKSGGAGLNLIGASRLVLFDSDWNPSNDLQAMAR 963
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ--TDSSATQ-GN----- 681
+ RDGQK+ IYR L+TGT++EK++QRQ+ K+GL + Q + T +S Q GN
Sbjct: 964 IHRDGQKRPCHIYRLLATGTLDEKIFQRQIIKQGLAGSLMQGEGSTKTSGKQSGNSKSGT 1023
Query: 682 --FLSTEDLRDLFTFHDDVRSEIHE 704
S ++L+ +F H + H+
Sbjct: 1024 SDAFSLDELKAIFALHTETACHTHD 1048
>gi|350408475|ref|XP_003488415.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Bombus
impatiens]
Length = 820
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/668 (35%), Positives = 355/668 (53%), Gaps = 102/668 (15%)
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
N + VD LV LRPHQR G+ F++EC+ GL + G ILAD+MGLGKTLQ I ++
Sbjct: 217 NETEVFVDTCLVNVLRPHQRHGIVFLYECIMGL-KVSNHFGAILADEMGLGKTLQCITII 275
Query: 230 YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQ-LIALCESTRDDVVSGI 287
+TLL +G G P++K +IVTP+ L +NW E K+W+G R+ + ++ D I
Sbjct: 276 WTLLKKGPYGYPILKYILIVTPSCLCNNWNKEFKQWLGFHRISPYVVNAKNKAKDFKKHI 335
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC-----DLLICDEAHRLKND-----QTL 337
+ V+I+SY+ C + +L+ICDE HRLKN+ + L
Sbjct: 336 RN--------SVMIISYDLLT------RCEQEVKEIPFNLIICDEGHRLKNNDIKAAKIL 381
Query: 338 TN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
N +N+L+EFF +++F NP ILG + F+ YYE I+ + PTA +
Sbjct: 382 YNLKCKRKILLTGTPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDH 441
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
LG ER++EL K FILRRT ++ +LP K +V C+L+ Q +LY+ S
Sbjct: 442 VVSLGTERANELREKTKCFILRRTQETINKYLPSKHELIVFCRLSIEQQDLYSQVTDSW- 500
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
+++S+ L ITALKK+CNHP+L Y+ E+F
Sbjct: 501 FNKSLSDNNIPH--LTVITALKKICNHPELFYNE------------------KTELFCID 540
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
S + D GK+ ++ LL +L+ +T++++VLVS YTQTLD+ +C + +
Sbjct: 541 SKTSNIKDSTKTVYCGKISIVQTLLRNLK-KTEEKLVLVSYYTQTLDILETVCNKEGLQF 599
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
LRLDG+T+ + R K++ FN S VFLLS+KAGG GLNL G +RL+LFD DWNPA+D
Sbjct: 600 LRLDGSTTSNTRSKIIERFNSTSDKSKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASD 659
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA AR+WRDGQKK V+I R L+TGTIEEK++QRQ+SK L + + D + + L
Sbjct: 660 SQAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETV----VDLNPSSSFKL 715
Query: 684 STEDLRDLFTFHDDVRSEIHENMHCTRCQNY---DDGAESIGEGDETNSANKNDQSDQEV 740
S +L+DLFT + H+ M+C+ C Y ++ +E + + D T+ D++ +
Sbjct: 716 SINELKDLFTLTANTNCLTHDLMNCS-CNGYKKSEETSEKLHQKDATSYQFLGDKTLKSN 774
Query: 741 TDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQ----ASAGDEV 796
I L W H Y + D I+Q + + +
Sbjct: 775 FTIN-------------------------QLLKWEH--YQQPISDKIIQEIMLSEVSENI 807
Query: 797 TFVFTNQV 804
TF+F N V
Sbjct: 808 TFIFKNSV 815
>gi|315043318|ref|XP_003171035.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311344824|gb|EFR04027.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 922
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/582 (40%), Positives = 328/582 (56%), Gaps = 48/582 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP++ R LR HQREGV+F++ECV GL G G ILAD+MGLGKTLQ+IA
Sbjct: 238 GKQIVDVVVDPIIGRHLREHQREGVKFLYECVMGLRPFNG-EGAILADEMGLGKTLQTIA 296
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L++TLL Q + +P++KKA+IV P +L++NW+ E KKW+G + + + +R+
Sbjct: 297 LIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGSRNR--- 353
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ FT S V+I+ YE R + + D++I DE HRLK Q + +
Sbjct: 354 -LSDFTM-GRSYSVMIIGYERLRSVQEQLTKGPGIDIVIADEGHRLKTVQNKSAQAIQSL 411
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
N+L EFFAMV+F NP +LG F R ++ I+ R+P A ++ +
Sbjct: 412 NTSRRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFDGPIVAARQPNAPKKVVE 471
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
G RS EL+ + FILRRT +LS HLPPK ++ C T Q +Y H + S +
Sbjct: 472 KGKARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRNVYQHVLASPLFQS 531
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIK-SGNPGTTGFEDCIRFFPPEMFSGRSG 505
+ L IT LKK+CN P L+ ++ +G T I P +
Sbjct: 532 VLKNS---ESALQLITILKKVCNSPSLLKPKLEDNGKAEDTSMSAFISSLQPNIHR---- 584
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
G SGK+ VL +LL +L+ +T +++VLVSNYT TL+L A L P+LR
Sbjct: 585 CLVAGS------SGKIRVLDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLR 638
Query: 566 LDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
LDG+T SKRQ LV+ FN P + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D
Sbjct: 639 LDGSTPASKRQALVDDFNRSPPSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDI 698
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA AR+ RDGQK+ IYR L G IEEK++QRQ++K GL + D +F S
Sbjct: 699 QAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVM----DQKGGIAHF-S 753
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDE 726
E+L+DLF ++ + + HE + C C + + I E D+
Sbjct: 754 QEELKDLFRLDENSKCQTHELLGC-ECGGRGEIPKHIKEEDD 794
>gi|345563719|gb|EGX46704.1| hypothetical protein AOL_s00097g452 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/554 (41%), Positives = 312/554 (56%), Gaps = 51/554 (9%)
Query: 178 PLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG- 236
P++ R LRPHQREGV F++E V G+ G G ILAD+MGLGKTLQ+IALL+TLL Q
Sbjct: 266 PIISRHLRPHQREGVSFLYEAVMGMRPYEG-RGAILADEMGLGKTLQTIALLWTLLKQNP 324
Query: 237 -FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPC 294
++ P+VKKA+IV P SL++NW E KKW+G R+ + D S + FT
Sbjct: 325 IYNQGPVVKKAMIVCPVSLINNWRREFKKWLGNERIHVFVA------DGKSNVRDFTH-G 377
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------- 340
V+IV YE R K + D++I DE HRLK + + +
Sbjct: 378 PVYNVMIVGYERLRSIQDKLKQCQ-VDIIIADEGHRLKTAENKSAQAIRSLATPRRVVLS 436
Query: 341 -----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
NDL EFF M +F NPGIL + + F++ +E I+ ++P A + +K+LG R + L
Sbjct: 437 GTPLQNDLREFFVMADFVNPGILENYSTFKKQFENPIVKSQQPEALKADKELGNARKASL 496
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
+ +N+F+LRRT +L+ +LPPK V+ C+ T Q ELY I++ KR +
Sbjct: 497 AELMNKFVLRRTAKILTKYLPPKTDVVLFCRPTKQQLELYQAIINTSVAKRQMGS---MD 553
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
L IT LKK+CN L+ G ED + G
Sbjct: 554 TALQLITLLKKVCNSTSLLK---------PKGKEDDEAKLSNSIL--EEAKVAGSALVNS 602
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
SGK+ VL +LL L++ T +++VLVSNYT TLD+ ++ + + +LRLDG T +KR
Sbjct: 603 NSSGKLKVLEKLLVTLKETTQEKVVLVSNYTSTLDILERMLNSKGFHHLRLDGKTPTNKR 662
Query: 576 QKLVNHFNDPSKN-EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
Q LV+ FN S + F FLLSSK+GG GLNLIG +RL LFD DWNPA D QA ARV RDG
Sbjct: 663 QDLVDKFNRVSSDVAFAFLLSSKSGGAGLNLIGASRLFLFDSDWNPATDLQAMARVHRDG 722
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
QK V+IYR ++TG I+EK+YQRQ++K+GL + D A NF S E L+DLF
Sbjct: 723 QKSHVYIYRMITTGCIDEKIYQRQITKQGLADSVM----DQKAGGSNFTSAE-LKDLFGL 777
Query: 695 HDDVRSEIHENMHC 708
+ H+ + C
Sbjct: 778 DTETTCNTHDLLGC 791
>gi|115492543|ref|XP_001210899.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197759|gb|EAU39459.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1329
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 241/601 (40%), Positives = 331/601 (55%), Gaps = 54/601 (8%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP+L + LRPHQREGV+F++ECV G+ + G G ILADDMGLGKTLQ+I
Sbjct: 265 GKQIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRDFNG-EGAILADDMGLGKTLQTIT 323
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVV 284
LL+TLL Q ++ P+VKKA+IV P +L++NW E +KW+G R+ + DD
Sbjct: 324 LLWTLLKQNPVYESPPVVKKALIVCPVTLINNWRREFRKWLGNERIGVFVY-----DDKR 378
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
+ FT + ++IV YE R + D++I DE HRLK Q + +
Sbjct: 379 KRLTDFTM-GRAYNIMIVGYEKLRSVQENLAKGAGVDIIIADEGHRLKTLQNKSGQAIQS 437
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
NDL+EFFA V+ NPG+LG F R +E I+ R+P ATE++
Sbjct: 438 LNANKRVILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFIREFEGPIVRRRQPEATEKDI 497
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G R+ EL ++FILRRT +L+++LPPK V+ C TP Q+ +Y + + S +
Sbjct: 498 EKGEARNEELRELTSKFILRRTADILADYLPPKTEYVLFCDPTPTQANIYQNVLASPVFQ 557
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
I L IT LKKLCN P L+ + + P + S
Sbjct: 558 SVIGN---AESALQLITILKKLCNSPSLLSPKNNKDQAPSETVAALLASLPSNLLRHFSP 614
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
S S K+ VL +LL L T ++IVLVSNYT TL+L A L P+LR
Sbjct: 615 SS----------SAKVRVLDQLLYKLHTTTSEKIVLVSNYTSTLNLLATLLTALSLPFLR 664
Query: 566 LDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
LDG+T KRQ LV FN P+ F FLLS+KAGG GLNLIG +RLVLFD DWNPA D
Sbjct: 665 LDGSTPAQKRQSLVEDFNRLPADRSFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDI 724
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA AR+ RDGQK+ IYR L G++EEK++QRQ++K GL + E D A S
Sbjct: 725 QAMARIHRDGQKRACRIYRILLKGSLEEKIWQRQVTKLGLADSV-MEHKDGMAQ----FS 779
Query: 685 TEDLRDLFTFHDDVRSEIHENMHC------TRCQNYDDGAESIGEGDETNSANKNDQSDQ 738
++LRDLF + R + HE + C + + D AE I + + ++S D +D+
Sbjct: 780 RDELRDLFRLDQESRCQTHELLGCDCGGRGVKSASPDRRAEPIVDSNGSSSPCVIDSADE 839
Query: 739 E 739
+
Sbjct: 840 D 840
>gi|169598354|ref|XP_001792600.1| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
gi|160704380|gb|EAT90191.2| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
Length = 1307
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/601 (38%), Positives = 335/601 (55%), Gaps = 56/601 (9%)
Query: 138 VENNVI-EENFTLP-PGVDP-----LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQRE 190
+ N V+ + N ++P P DP LV+ +PE G +V + VDP+L + LR HQRE
Sbjct: 209 LSNTVLPQRNSSIPQPRHDPNLPNALVMKRPESAPK-GKQIVDVVVDPVLSKHLRDHQRE 267
Query: 191 GVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAII 248
GV+F++ECV G+ G I+AD+MGLGKTLQ+I LL+TL+ Q + +P+VKKA++
Sbjct: 268 GVKFLYECVMGMRCEG--EGAIMADEMGLGKTLQTITLLWTLMKQNPIHESQPIVKKALV 325
Query: 249 VTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFR 308
V P LV NW+ E +KW+G ++ + +D I +FT + V+I+ YE R
Sbjct: 326 VCPAGLVDNWKREFRKWLGNE-RIGVFVANGKD---KKITNFTM-GKAYNVMIIGYEMLR 380
Query: 309 MHSSKFSCSESCDLLICDEAHRLK--NDQTL-------TNR----------NDLEEFFAM 349
+ D++I DE HRLK N++ + T R NDL EF+
Sbjct: 381 TVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGTPLQNDLGEFYTA 440
Query: 350 VNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNA 409
++F NPG+LG + F+R +E I+ R+P A+E E + G R EL + ++F++RRT
Sbjct: 441 IDFVNPGLLGQRSAFKRTFEAPILRSRQPEASESELEKGEARWKELVSLTSRFMIRRTAE 500
Query: 410 LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCN 469
+LS +LP K +V CK T Q+E Y + S A+ + L I LKK+CN
Sbjct: 501 VLSKYLPSKTEHIVFCKPTKAQAEAYRAILSSPFFSVAVGGNMDMA--LQLIMVLKKVCN 558
Query: 470 HPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLG 529
P LI T + + + PP + + + S K+ +L L+
Sbjct: 559 SPSLIKTTKDGEATPSEMLQALLPLVPPHVLNSHASS------------TKLRLLDSLVH 606
Query: 530 HLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKN 588
+ T+++IV+VSNYT TLD+ ++ Y YLRLDG+T +KRQ LV FN P
Sbjct: 607 RIHTTTEEKIVIVSNYTTTLDMIERMLVSLSYTYLRLDGSTPSNKRQALVEKFNKTPKAA 666
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
F FLLS+K+GG GLNLIG +R+VLFD DWNPA D QA AR+ RDGQK V IYRFL G
Sbjct: 667 SFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPVKIYRFLVKG 726
Query: 649 TIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
I+EK+YQRQ+ K GL + D+ A+ +F S ++LRDLF + + H+ + C
Sbjct: 727 GIDEKIYQRQVMKMGLANAV----VDNKASASSF-SKDELRDLFRLDEREGCQTHDLLGC 781
Query: 709 T 709
T
Sbjct: 782 T 782
>gi|380027284|ref|XP_003697358.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
florea]
Length = 717
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/681 (35%), Positives = 354/681 (51%), Gaps = 84/681 (12%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
P V P + + +N N +++D LV LRPHQR G+ F++EC+ GL G
Sbjct: 93 PFVMPSINISQDWTKNILQNEKEVSIDACLVNVLRPHQRHGIVFLYECIMGL-KVPNYFG 151
Query: 211 CILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GR 269
ILAD+MGLGKTLQ I +++TLL +G G P++K +IVTP+SL +NW E K W+G R
Sbjct: 152 AILADEMGLGKTLQCITIIWTLLKKGPYGYPILKYVLIVTPSSLCNNWNKEFKHWLGFHR 211
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ + + + +F + V+I+SYE + + + DL+ICDE H
Sbjct: 212 ISPYVVNAKNKPN------NFKKQIRN-SVMIISYEMLIKYRQEIE-QIAFDLIICDEGH 263
Query: 330 RLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
RLKN+ T + NDL+EFFA+++F NP ILG ++ F+ YYE
Sbjct: 264 RLKNNDIKTTKILSNLNCKRRILLTGTPVQNDLQEFFALIDFVNPVILGSSSEFKNYYEK 323
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ + P A+ LG ER++EL K FILRRT +++ +LP K V+ C+L+
Sbjct: 324 PIVASQCPNASCHVISLGTERANELYEKTKCFILRRTQEIINKYLPSKHELVIFCRLSDE 383
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q +LY+ + K + L ITALKK+CNHP+L Y+ ++
Sbjct: 384 QEDLYSRITNLWFNKNVLPNNNIPH--LTLITALKKICNHPELFYNDKNDLCLNKVSIKN 441
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
R G + GK+ ++ L+ +L+ +T++++VL+S YTQTLD
Sbjct: 442 I----------TRKGYY-----------GKISIVQTLIRNLK-KTNEKLVLISYYTQTLD 479
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
L ++C +LRLDG T+ + R K++ FN + N VFLLS+KAGG GLNL G +R
Sbjct: 480 LLERVCNMECLQFLRLDGNTTSNTRSKIIEQFNSTNDNNKVFLLSAKAGGVGLNLPGASR 539
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
L+LFD DWNPA+D QA AR+WRDGQK V+I R L+TGTIEEK++QRQ++K L + +
Sbjct: 540 LILFDSDWNPASDSQAMARIWRDGQKNDVYILRLLTTGTIEEKIFQRQINKANLSETVVD 599
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSA 730
SS LS DL+DLFT + S H+ M C+ C Y E E + N+
Sbjct: 600 LNYFSSIK----LSMSDLKDLFTLTTNTNSLTHDLMKCS-CNGYKVSEEISKESHQENNR 654
Query: 731 NKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQ- 789
+ ++ ++ L W H Y +P+ I+Q
Sbjct: 655 EYQFLLEDKMPNVKNLTI--------------------NQLLKWEH--YQQPIPNKIIQE 692
Query: 790 ---ASAGDEVTFVFTNQVDGK 807
+ D +TF+ N V K
Sbjct: 693 IMLSEVSDNITFILKNSVLNK 713
>gi|169767388|ref|XP_001818165.1| DNA-dependent ATPase [Aspergillus oryzae RIB40]
gi|83766020|dbj|BAE56163.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871902|gb|EIT81051.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 957
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 257/682 (37%), Positives = 360/682 (52%), Gaps = 83/682 (12%)
Query: 91 KPPCSNGYDN----GNDQLARRLCARKRF-VPWGSSRPVLVTITNRLDLPRTVENNVIEE 145
KP S +N G Q+ +RK+ + RP+L +P+ E +
Sbjct: 187 KPSTSAAKENPGEKGQMQIIPNPASRKQSSISSAYKRPLLENTI----IPQKSEEEPVPR 242
Query: 146 NFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
+ PG LV+ +P G +V + VDP+L + LRPHQREGV+F++ECV G+ +
Sbjct: 243 HDPKQPGA--LVMKRPASAPK-GKRIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRSF 299
Query: 206 AGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
G G ILADDMGLGKTLQ+I LL+TLL Q ++ P VKKA+IV P +L++NW E +
Sbjct: 300 NG-QGAILADDMGLGKTLQTITLLWTLLKQNPIYENPPEVKKALIVCPVTLINNWRKEFR 358
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
KW+G R+ + DD + FT + ++IV YE R + D+
Sbjct: 359 KWLGNERIGVFVF-----DDKRKRLTDFTR-GRAYNIMIVGYEKLRTVQEGLAQGAGVDI 412
Query: 323 LICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAY 363
+I DE HRLK Q + + NDL+EFFA V+ NPG+LG+
Sbjct: 413 IIADEGHRLKTLQNKSGQAIQSLNATKRVILSGTPIQNDLKEFFAAVDLVNPGVLGNFKA 472
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F R +E I+ R+P AT ++ + G R+ EL +QF+LRRT +L+N+LPPK ++
Sbjct: 473 FVREFEVPIVKSRQPEATRKDIEKGEARNEELRELTSQFMLRRTADILANYLPPKSEYIL 532
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C TP Q+ +Y + + S + A+ L IT LKKLCN P L+ P
Sbjct: 533 FCDPTPTQANIYQNVLASPVFQCAVGNS---ENALQLITILKKLCNSPSLLSPRNVDEKP 589
Query: 484 GTT-------GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
T + +R F P S K+ VL +LL L T
Sbjct: 590 SETIAALLSSLPPNLLRHFSPSS------------------SAKIRVLDQLLHILHTSTS 631
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLS 595
+++VLVSNYT TL+L A L P+LRLDG+T KRQ LV FN P+ F FLLS
Sbjct: 632 EKVVLVSNYTSTLNLLATLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRFPTNRCFAFLLS 691
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
+KAGG GLNLIG +RL+LFD DWNPA D QA AR+ RDGQK+ IYR L G++EEK++
Sbjct: 692 AKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIW 751
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC---TRCQ 712
QRQ++K GL + E D++A S ++L+DLF D + + HE + C R Q
Sbjct: 752 QRQVTKLGLADSV-MEHKDNAAQ----FSRDELKDLFRLDQDSKCQTHELLGCDCGGRGQ 806
Query: 713 NYDD-----GAESIGEGDETNS 729
N G+ + G+G+ +S
Sbjct: 807 NVSTSDSHAGSPADGQGNVLDS 828
>gi|238484253|ref|XP_002373365.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus
NRRL3357]
gi|220701415|gb|EED57753.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus
NRRL3357]
Length = 885
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 257/682 (37%), Positives = 360/682 (52%), Gaps = 83/682 (12%)
Query: 91 KPPCSNGYDN----GNDQLARRLCARKRF-VPWGSSRPVLVTITNRLDLPRTVENNVIEE 145
KP S +N G Q+ +RK+ + RP+L +P+ E +
Sbjct: 115 KPSTSAAKENPGEKGQMQIIPNPASRKQSSISSAYKRPLLENTI----IPQKSEEEPVPR 170
Query: 146 NFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
+ PG LV+ +P G +V + VDP+L + LRPHQREGV+F++ECV G+ +
Sbjct: 171 HDPKQPGA--LVMKRPASAPK-GKRIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRSF 227
Query: 206 AGIHGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
G G ILADDMGLGKTLQ+I LL+TLL Q ++ P VKKA+IV P +L++NW E +
Sbjct: 228 NG-QGAILADDMGLGKTLQTITLLWTLLKQNPIYENPPEVKKALIVCPVTLINNWRKEFR 286
Query: 264 KWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
KW+G R+ + DD + FT + ++IV YE R + D+
Sbjct: 287 KWLGNERIGVFVF-----DDKRKRLTDFTR-GRAYNIMIVGYEKLRTVQEGLAQGAGVDI 340
Query: 323 LICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAY 363
+I DE HRLK Q + + NDL+EFFA V+ NPG+LG+
Sbjct: 341 IIADEGHRLKTLQNKSGQAIQSLNATKRVILSGTPIQNDLKEFFAAVDLVNPGVLGNFKA 400
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F R +E I+ R+P AT ++ + G R+ EL +QF+LRRT +L+N+LPPK ++
Sbjct: 401 FVREFEVPIVKSRQPEATRKDIEKGEARNEELRELTSQFMLRRTADILANYLPPKSEYIL 460
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C TP Q+ +Y + + S + A+ L IT LKKLCN P L+ P
Sbjct: 461 FCDPTPTQANIYQNVLASPVFQCAVGNS---ENALQLITILKKLCNSPSLLSPRNVDEKP 517
Query: 484 GTT-------GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
T + +R F P S K+ VL +LL L T
Sbjct: 518 SETIAALLSSLPPNLLRHFSPSS------------------SAKIRVLDQLLHILHTSTS 559
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLS 595
+++VLVSNYT TL+L A L P+LRLDG+T KRQ LV FN P+ F FLLS
Sbjct: 560 EKVVLVSNYTSTLNLLATLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRFPTNRCFAFLLS 619
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
+KAGG GLNLIG +RL+LFD DWNPA D QA AR+ RDGQK+ IYR L G++EEK++
Sbjct: 620 AKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIW 679
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC---TRCQ 712
QRQ++K GL + E D++A S ++L+DLF D + + HE + C R Q
Sbjct: 680 QRQVTKLGLADSV-MEHKDNAAQ----FSRDELKDLFRLDQDSKCQTHELLGCDCGGRGQ 734
Query: 713 NYDD-----GAESIGEGDETNS 729
N G+ + G+G+ +S
Sbjct: 735 NVSTSDSHAGSPADGQGNVLDS 756
>gi|403160793|ref|XP_003321236.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170399|gb|EFP76817.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1065
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 252/686 (36%), Positives = 370/686 (53%), Gaps = 78/686 (11%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+V + VDP + R LRPHQ +G++FM+EC GL G HGCILAD+MGLGK++Q+I+LL+
Sbjct: 398 IVDVVVDPSIARSLRPHQVDGLKFMYECTMGLREVGG-HGCILADEMGLGKSIQAISLLW 456
Query: 231 TLLCQG-FDGK-PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
TLL Q G+ P++K+A+IV P +LV NW+ EI KW+G R +L + D
Sbjct: 457 TLLRQNPISGQGPVIKRAMIVCPVTLVKNWKREIHKWLG-RSRLNVFTADGKCD----FK 511
Query: 289 SFTDPCS-SLQVLIVSYETFRMHSSKF-SCSESCDLLICDEAHRLKNDQTLTNR------ 340
FT CS VL++ YE R S + S L+I DE HRL++ + T +
Sbjct: 512 QFT--CSLYYNVLVIGYEKLRTLSKEVNSIYPPIGLIIADEGHRLRSIEAKTTQALRSLK 569
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
N+L E++AMV+F NPGIL D F++ +E I+ REP ++
Sbjct: 570 TKRRVVLSGTPIQNNLTEYYAMVDFVNPGILDDYRTFKKKFEQPILKSREPCCNPVQRSE 629
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G R+ EL+ ++LRR + ++ HLPP+ V T +Q +Y + S +
Sbjct: 630 GEARAEELAKMSRHYVLRRGSEVIQEHLPPRHDYCVFISPTTVQRNIYEAVLDSPETRAI 689
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYD--TIKS-GNPGTTGFEDCIRFFPPEMFSGRS 504
S + Q +L + LK LCN P L+ + +IKS G +T FP
Sbjct: 690 FSGDISQHLVL--MNTLKLLCNSPGLLMNEYSIKSLGQISST-------LFP-------- 732
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
+W + V+LSGK+ LA+ L L+++ +++I+LVSN+T+TLD+ C+ YP+
Sbjct: 733 -AWVTRED--VQLSGKLIALAKFLDILKKKNNEKIILVSNFTKTLDIVESHCKASHYPFC 789
Query: 565 RLDGTTSISKRQKLVNHFNDPSKN-EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
RLDG T+ ++R +V FN S + +F+FLLSSK+GG GLNLIG +RL+LFD DWNPA D
Sbjct: 790 RLDGKTAQNQRDNIVQVFNRSSASAQFIFLLSSKSGGVGLNLIGASRLILFDGDWNPATD 849
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ--EQTDSSATQGN 681
QA AR+WR GQ+K IYRFL+TGTI+E ++QRQ++K GL + + + +A GN
Sbjct: 850 LQAMARIWRQGQQKPCHIYRFLTTGTIDECIFQRQVTKIGLATDLMSAPKAGEETAGGGN 909
Query: 682 FLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYD-DGAESIGEGDETNSANKN-DQSDQE 739
+ +L+ +F H D H+ + C +N + E E DE D SD E
Sbjct: 910 TFTKNELKRVFELHSDTDCYTHDLLECQCLENKSIEEPEGWKEEDEREDPMACLDHSDSE 969
Query: 740 VT----DIGGFAGLAGCLHKLKSSEKQLGTPLEE---DLNNWGHHFYSMSVPDAILQASA 792
+ D+ GF + K K SEK+ L+ +L W H + + P ++
Sbjct: 970 ASLPDADLSGFLPAS----KYKPSEKEDAFKLKRKLAELEKWVH--VNATDPKSV----- 1018
Query: 793 GDEVTFVFTNQVDGKLVPIESKVSPK 818
DE+ NQ L P SK S K
Sbjct: 1019 -DELEDEILNQTVSALNPNLSKKSEK 1043
>gi|67517153|ref|XP_658459.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4]
gi|40746529|gb|EAA65685.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4]
gi|259488860|tpe|CBF88651.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1011
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 245/595 (41%), Positives = 335/595 (56%), Gaps = 61/595 (10%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP+L + LRPHQREGV+F++ECV G+ + G G ILADDMGLGKTLQ+I
Sbjct: 279 GKRIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRSFNG-EGAILADDMGLGKTLQTIT 337
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVV 284
LL+TLL Q ++ P++KKA+IV P +L++NW E +KW+G R+ + DD
Sbjct: 338 LLWTLLKQNPIYEAAPVIKKALIVCPVTLINNWRREFRKWLGNERIGVFVF-----DDKR 392
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---- 340
+ FT + ++IV YE R + D++I DE HRLK Q + +
Sbjct: 393 KRLTDFTM-GKAYSIMIVGYEKLRSVQEGLARGNGVDIVIADEGHRLKTLQNKSGQAIQS 451
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
NDL+EFFA V+ NPG+LG F + +E I+ R+P ATE++
Sbjct: 452 LNATKRIILSGTPIQNDLKEFFAAVDLVNPGVLGSFKSFIKEFEGPIVRSRQPEATEKDI 511
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ G R+ EL +QF+LRRT +L+++LPPK V+ CK T Q+++Y + + S +
Sbjct: 512 EKGEARNEELRELTSQFMLRRTADILADYLPPKTEYVLFCKPTNTQAKIYQNVLASPVFQ 571
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
A+ L IT LKKLCN P L+ + P T + PP + S
Sbjct: 572 GALGN---SESALQLITILKKLCNSPSLLSLKDANEKPSET-IAAILSSLPPNLLRHFSP 627
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
S S K+ VL +LL +LR T +++VLVSNYT TLDL A L P+LR
Sbjct: 628 S----------CSAKIRVLDQLLHYLRTSTSEKVVLVSNYTSTLDLLANLLSSLSLPFLR 677
Query: 566 LDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
LDG+T KRQ LV FN P+ F FLLS+KAGG GLNLIG +RLVLFD DWNPA D
Sbjct: 678 LDGSTPAQKRQSLVEDFNRHPASTCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDI 737
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA AR+ RDGQK IYR L G++EEK++QRQ++K GL + E DS A S
Sbjct: 738 QAMARIHRDGQKHHCHIYRILLQGSLEEKIWQRQVTKIGLADSV-MEHKDSVAQ----FS 792
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQE 739
++LRDLF DV ++CQ +D A G G ++A+ ND + Q+
Sbjct: 793 RDELRDLFRL--DV---------VSKCQTHDLLACGCG-GKGYSTASGNDHTPQQ 835
>gi|165971312|gb|AAI58841.1| Rad54l protein [Rattus norvegicus]
Length = 470
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/413 (49%), Positives = 263/413 (63%), Gaps = 39/413 (9%)
Query: 322 LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAA 362
L+ICDE HRLKN + T + NDL E+F++V+F N GILG A
Sbjct: 14 LVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAH 73
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
F++++E I+ R+ A+E +++LG ER EL + VN+ ++RRT+ +LS +LP KI +V
Sbjct: 74 EFKKHFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQV 133
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGN 482
VCC+LTPLQ+ELY F+ + + E L+ IT+LKKLCNHP LIYD +
Sbjct: 134 VCCRLTPLQTELYKRFLRQAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEE 193
Query: 483 PGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE--LSGKMHVLARLLGHLRQRTDDRIV 540
GFE + FPP G + VE LSGKM VL +L R R+ D++V
Sbjct: 194 ---DGFEGTLGIFPP-----------GYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVV 239
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
LVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +FVF+LSSKAGG
Sbjct: 240 LVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGG 299
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
CGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ
Sbjct: 300 CGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSH 359
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
K+ L + E+ D S +L++LFT + S+ H+ +HC RC N
Sbjct: 360 KKALSSCVVDEEQDVE----RHFSLGELKELFTLDEASLSDTHDRLHCRRCVN 408
>gi|168048890|ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162671754|gb|EDQ58301.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1122
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/624 (38%), Positives = 336/624 (53%), Gaps = 105/624 (16%)
Query: 159 WQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
W+ E D VP+ VDP + LRPHQ++GV FM+EC+ GL + GC+LAD+MG
Sbjct: 457 WKLNE---DSSTEVPVVVDPYIASKLRPHQKDGVMFMYECIMGL-RSNSFCGCLLADEMG 512
Query: 219 LGKTLQSIALLYTLL-----------------------------------CQGFDGKPMV 243
LGKTLQ I L++T+L QG G P V
Sbjct: 513 LGKTLQVITLIWTILKQHTLFVLLDLSNEDVSSVICKRMKLYMTVGVDFHSQGPGGSPAV 572
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCEST--RDDVVSGID---SFTDPCSSL 297
K+ ++V P+SLV NW E+ KW+G R++ +A+ T R+ D F+ P
Sbjct: 573 KRVLVVCPSSLVHNWGNEVHKWLGRERLRFMAVHAGTAYREAAQKFADFKAGFSSP---- 628
Query: 298 QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---DQTLTN--------------- 339
+LI SYE R H + ++ LL+CDEAHRLKN ++T+
Sbjct: 629 -LLITSYEILRKHIDIIASTKP-GLLVCDEAHRLKNCAGNKTIDALVGLQCPRKILLTGT 686
Query: 340 --RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
+NDL EF+AM++F NPG+LG + F+R + I ++ TA+EEE+KLG RS EL +
Sbjct: 687 PVQNDLNEFYAMIDFANPGLLGPLSSFKRIFAEPIERSQDRTASEEEQKLGQARSLELQS 746
Query: 398 KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH--------SKNVKRAIS 449
+ ILRRT + +LP K EVV K+ + E + H S ++
Sbjct: 747 RTEFCILRRTANINEAYLPTKT-EVVARKIL-FKHEGITGWHHCPMSPKEGSMALRSVYM 804
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGN------------PGTTGFEDCIRFFPP 497
E + IL+ IT+L+KLC+HP+L Y+ I G G + F D
Sbjct: 805 TENVSATILSSITSLRKLCSHPQLSYNDIIEGTNLDAELKSQIIAAGLSRFSDSTDNI-- 862
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL----RQRTDDRIVLVSNYTQTLDLFA 553
E+ R+ + D W + SGK+ L LL + R DR+V+VSN+T+TLDL
Sbjct: 863 EVLQSRA---SLSDEGW-KFSGKLACLYWLLRTVYTSRTARQKDRVVVVSNFTRTLDLIQ 918
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
+C + + +LRLDG+T SKRQ LV+ N + FVFLLSSKAGG GLNLIG NRLVL
Sbjct: 919 DMCTSQGWNWLRLDGSTEASKRQLLVDQLNSGVGDVFVFLLSSKAGGTGLNLIGANRLVL 978
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
FDPDWNPA D QA AR+WR+GQ K V IYR LSTG+IEEK+YQRQ+ K G+ ++ +
Sbjct: 979 FDPDWNPATDSQAIARIWREGQLKPVLIYRLLSTGSIEEKIYQRQIMKGGMSAAVEGDAD 1038
Query: 674 --DSSATQGNFLSTEDLRDLFTFH 695
+ G S E+L++LFT +
Sbjct: 1039 VHTKKSNIGRHFSKEELKELFTLN 1062
>gi|70996252|ref|XP_752881.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus fumigatus Af293]
gi|66850516|gb|EAL90843.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus
Af293]
Length = 969
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/588 (40%), Positives = 325/588 (55%), Gaps = 66/588 (11%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
PG LV+ +P+ G +V + VDP+L + LR HQREGVQF++ECV G+ + G G
Sbjct: 256 PGA--LVMKRPDSVPK-GKQIVDVVVDPILSKHLRQHQREGVQFLYECVMGMRSFNG-EG 311
Query: 211 CILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
ILADDMGLGKTLQ+I LL+TLL Q + P++KKA+IV P +L++NW E +KW+G
Sbjct: 312 AILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWRKEFRKWLGN 371
Query: 269 -RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
R+ + DD + FT + V+IV YE R + D++I DE
Sbjct: 372 ERIGVFVF-----DDKRKRLTDFTM-GRAYSVMIVGYEKLRTVQEGLARGAGVDIIIADE 425
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLK Q + + NDL+EFFA V+ NPGILG+ F R +
Sbjct: 426 GHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPGILGNFKAFVREF 485
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ R+P AT++E + G R+ EL ++F+LRRT +L+ +LPPK V+ C T
Sbjct: 486 EGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTVDILAKYLPPKTEYVLFCNPT 545
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-- 486
Q+ +Y + + S + AI L IT LKKLCN P L+ P T
Sbjct: 546 STQATIYKNVLASPVFQCAIGNS---ENALQLITILKKLCNSPSLLSPKTGDERPSETIT 602
Query: 487 -----GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
+ +R F P S K+ VL +LL +LR T ++IVL
Sbjct: 603 ALLSSLPPNLLRHFTPS------------------CSAKIRVLDQLLHNLRTSTSEKIVL 644
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGG 600
VSNYT TL+L A L P+LRLDG+T KRQ LV FN P F FLLS+KAGG
Sbjct: 645 VSNYTSTLNLLANLLNSLSLPFLRLDGSTPAQKRQALVEDFNRLPPNRCFAFLLSAKAGG 704
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++
Sbjct: 705 TGLNLIGASRLVLFDVDWNPATDVQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 764
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
K GL + + + +S Q S ++L+DLF + R + HE + C
Sbjct: 765 KIGLADSVMEHK--NSVAQ---FSRDELKDLFRLDEASRCQTHELLGC 807
>gi|307105716|gb|EFN53964.1| hypothetical protein CHLNCDRAFT_136249 [Chlorella variabilis]
Length = 698
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 276/451 (61%), Gaps = 41/451 (9%)
Query: 50 EDRKSKNVDALVRGN-LVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARR 108
E+R+ +N+ A+V G L ++RQ+LLPR+L+V + A V R+PFK P N + L R+
Sbjct: 67 EERRQQNIRAMVSGTGLALRRQALLPRMLTVQQVAVVLRRPFKSPHPNA-PAVSQALKRK 125
Query: 109 LCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEEN----------FTLPPGVDPLVL 158
L AR FVPWG + V + ++ P + LPPGVDPLVL
Sbjct: 126 LAARNTFVPWGGGKFVPLKLSMPPREPEPLPEGASAAAAAAGAAQPAAVVLPPGVDPLVL 185
Query: 159 WQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
W P G P+ VD +L +FLRPHQREGVQFMFECV+GL + G GCILADDMG
Sbjct: 186 WAPPA----GAEGEPVRVDDMLTQFLRPHQREGVQFMFECVTGLRSFQG-QGCILADDMG 240
Query: 219 LGKTLQSIALLYTLLCQG----FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
LGKTLQ I+LL+TLL G P+ K+ II PTSLV NW++E +KW+ GRV+ +
Sbjct: 241 LGKTLQGISLLWTLLSSRGHLLLGGDPVAKRVIICCPTSLVGNWDSECQKWLKGRVRTLP 300
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
LCES+RD+ ++ I F P + QV+IVSYETFR+H+ +F +CDLLICDEAHRLKND
Sbjct: 301 LCESSRDEALASISQFLSPRNPYQVMIVSYETFRIHAERFQAEGTCDLLICDEAHRLKND 360
Query: 335 QTLTNRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
TLTNR L+ +L R E A E E L ER++E
Sbjct: 361 ATLTNRA-LDSLACRRRV----LLSGTPLQNRLDEFY-------DAGEGEVALCRERTTE 408
Query: 395 LSAKVNQFILRRTNALLSNHLPPK-------IIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
LSA VN+FILRRTN LLS HLPPK ++E+VCC+LTPLQ LY HF+ SK A
Sbjct: 409 LSALVNEFILRRTNTLLSEHLPPKARLWGRCVVEIVCCRLTPLQRALYCHFLESKAAA-A 467
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTI 478
+ K +++L+ IT+L+KL NHPKLI+D +
Sbjct: 468 LFATQKAARVLSAITSLRKLLNHPKLIWDAL 498
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 763 LGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLV 809
+G P EE L W HH + +VPD +L+ D V+FVF+ +VDG+ V
Sbjct: 513 VGKPGEEQLRLWAHHSTTATVPDQVLRRIGDDHVSFVFSLEVDGREV 559
>gi|405119148|gb|AFR93921.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
Length = 1036
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/607 (37%), Positives = 328/607 (54%), Gaps = 69/607 (11%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DP+L LR HQ+EGV+FM+ CV G+ A G GCILAD+MGLGKTLQ+IA
Sbjct: 316 GTTIVDVVIDPVLGDLLREHQKEGVKFMYSCVMGMTGAEG-EGCILADEMGLGKTLQTIA 374
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L+YT+L Q + ++ KAIIV P +LV NW E KKW + C + VV
Sbjct: 375 LIYTMLKQSPFANQTSIIGKAIIVCPVTLVDNWRKEFKKW------RVVECSNGLRKVVK 428
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
+ S C DL++CDE HRLK+ T +
Sbjct: 429 ELAS--------------------------CIPPIDLIVCDEGHRLKSKDNKTTKMFDML 462
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NDL E++AMVNF PG+LG + F ++YE I+ R P + ++ +
Sbjct: 463 KTQRRIILSGTPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRTPNCSAKDVE 522
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
LG ER+++L+ +F+LRRT A+L N+LPPK V+ + LQ + ++ + V+
Sbjct: 523 LGRERANDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSNLLDPNIVRS 582
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
I QS LA I ++K+ N P L+ K + T +D + S
Sbjct: 583 FIRGYGAQS--LALIDLMRKISNSPMLL----KRNDNELTRADDDLGSATSAAISAIPSE 636
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
D V SGKM +L ++L + Q T +++V+VSN+T TLDL LC+ +RY YLRL
Sbjct: 637 TNIND---VTTSGKMLLLDKMLHSIYQCTQEKVVVVSNWTSTLDLIQGLCKLKRYNYLRL 693
Query: 567 DGTTSISKRQKLVNHFNDPS--KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
DG+T +RQ LV+ FN + FVFLLS+KAGG GLNLIGG+RL+LFD DWNP+ D
Sbjct: 694 DGSTPPKQRQDLVDRFNKDQGRQGSFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDL 753
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA AR+ RDGQK+ V+IYRFL+T I+EK+YQRQ++K GL + + T + S
Sbjct: 754 QAMARIHRDGQKRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRSEKQTSKDSFS 813
Query: 685 TEDLRDLFTFHDDVRS-EIHENMHCTRCQNYDDGAESIGEGDETNSA---NKNDQSDQEV 740
+LRD+FT + + H+ + C + I EG+ ++ N + +SD +
Sbjct: 814 AAELRDIFTLNLQTDGCQTHDLLGCQCIKKPAGKTRDIAEGEHSSKNLPDNASGKSDSDE 873
Query: 741 TDIGGFA 747
D F
Sbjct: 874 NDHPTFV 880
>gi|170092931|ref|XP_001877687.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria
bicolor S238N-H82]
gi|164647546|gb|EDR11790.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria
bicolor S238N-H82]
Length = 1051
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/644 (37%), Positives = 335/644 (52%), Gaps = 104/644 (16%)
Query: 150 PPGVDPLVLWQP-EEPQNDGGNLVPITVDPLLVRFLRPHQREG----------------- 191
P D +V+ P +E N+VP+ +DP+L R +RPHQ+EG
Sbjct: 319 PDAADAVVMKFPSKEHTKSNLNVVPVVLDPILSRRMRPHQKEGWLTGVSSVRLYSEQLSQ 378
Query: 192 -VQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG--KPMVKKAII 248
V F++ECV GL G GCILAD+MGLGKTLQ+IAL++TLL Q G +P KK +I
Sbjct: 379 GVMFLYECVMGLRKHEG-QGCILADEMGLGKTLQTIALIWTLLKQNLYGSKEPAAKKVLI 437
Query: 249 VTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFR 308
V P SL +NW+AE KW+G + +CE + S ++ F + VL++ YE R
Sbjct: 438 VCPVSLTTNWKAEFNKWLGKDRVGVVICEKDK----SRVNQFFYN-KNQHVLVIGYERLR 492
Query: 309 MHSSKFSCSESC---DLLICDEAHRLKNDQTLTN-------------------RNDLEEF 346
S S DL++CDE HRLK+ T +NDL EF
Sbjct: 493 TVIDTLSSGVSVPAIDLIVCDEGHRLKSANNKTTAILKALRTPRRVILSGTPIQNDLGEF 552
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR 406
AM F NPG+L D FRR YE+ I+ R P A+ +E ++G R+++L + N F+LRR
Sbjct: 553 HAMAEFCNPGLLDDYNVFRRVYESPILKSRAPDASAKEIEIGETRTAQLLSISNSFVLRR 612
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
LL NHLPPK VV T LQ +++ + + + T +S LA I L K
Sbjct: 613 DATLLKNHLPPKYEYVVFVTPTALQLSMFSKILRPDRLIDLVQSSTAES--LALINILTK 670
Query: 467 LCNHPKLIYDTIKSGNPGT---------TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
+ N P L+ T TG ++ + P G L
Sbjct: 671 ISNSPILLKAAADKAKIKTSGDAPYILRTGVDEALGLLPDTTHFGD-----------FSL 719
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGK+ LA+LL +R T+++ VLVS+YT TL++ C+++ Y Y RLDG T KRQ+
Sbjct: 720 SGKLIALAKLLTIIRHTTEEKCVLVSHYTSTLNILEAFCQKKGYSYYRLDGQTPQVKRQE 779
Query: 578 LVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP---------------- 620
VN FN+ S ++ F+FLLSSKAGG G+NLIG +RL L D DWNP
Sbjct: 780 YVNAFNNVSQRSSFIFLLSSKAGGLGINLIGASRLCLIDSDWNPRLVGRRTQLTPTLISD 839
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI-------QQEQT 673
++D Q+ AR RDGQK+ VFIYRFL+TG I+EK+YQRQ++K GL + +T
Sbjct: 840 SHDLQSMARCHRDGQKRPVFIYRFLTTGAIDEKIYQRQVTKLGLSASLIGSAGSSSASKT 899
Query: 674 DSSA-------TQGNFLSTED--LRDLFTFHDDVRSEIHENMHC 708
DS + Q +F ++ D LRD+F H D H+ + C
Sbjct: 900 DSFSRKEVHIQLQFHFKNSTDVQLRDIFRIHPDTICNTHDLLEC 943
>gi|159131635|gb|EDP56748.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus
A1163]
Length = 969
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/588 (40%), Positives = 325/588 (55%), Gaps = 66/588 (11%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
PG LV+ +P+ G +V + VDP+L + LR HQREGVQF++ECV G+ + G G
Sbjct: 256 PGA--LVMKRPDSVPK-GKQIVDVVVDPILSKHLRQHQREGVQFLYECVMGMRSFNG-EG 311
Query: 211 CILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
ILADDMGLGKTLQ+I LL+TLL Q + P++KKA+IV P +L++NW E +KW+G
Sbjct: 312 AILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWRKEFRKWLGN 371
Query: 269 -RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
R+ + DD + FT + V+IV YE R + D++I DE
Sbjct: 372 ERIGVFVF-----DDKRKRLTDFTM-GRAYSVMIVGYEKLRTVQEGLARGAGVDIIIADE 425
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLK Q + + NDL+EFFA V+ NPGILG+ F R +
Sbjct: 426 GHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPGILGNFKAFVREF 485
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ R+P AT++E + G R+ EL ++F+LRRT +L+ +LPPK V+ C T
Sbjct: 486 EGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTVDILAKYLPPKTEYVLFCNPT 545
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-- 486
Q+ +Y + + S + AI L IT LKKLCN P L+ P T
Sbjct: 546 STQATIYKNVLASPVFQCAIGNS---ENALQLITILKKLCNSPSLLSPKTGDERPSETIT 602
Query: 487 -----GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
+ +R F P S K+ +L +LL +LR T ++IVL
Sbjct: 603 ALLSSLPPNLLRHFTPS------------------CSAKIRLLDQLLHNLRTSTSEKIVL 644
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGG 600
VSNYT TL+L A L P+LRLDG+T KRQ LV FN P F FLLS+KAGG
Sbjct: 645 VSNYTSTLNLLANLLNSLSLPFLRLDGSTPAQKRQALVEDFNRLPPNRCFAFLLSAKAGG 704
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++
Sbjct: 705 TGLNLIGASRLVLFDVDWNPATDVQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 764
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
K GL + + + +S Q S ++L+DLF + R + HE + C
Sbjct: 765 KIGLADSVMEHK--NSVAQ---FSRDELKDLFRLDEASRCQTHELLGC 807
>gi|451845347|gb|EMD58660.1| hypothetical protein COCSADRAFT_264941 [Cochliobolus sativus
ND90Pr]
Length = 889
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/584 (39%), Positives = 327/584 (55%), Gaps = 54/584 (9%)
Query: 150 PPGVDPLVLWQPEE-PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
P + L++ +P+ P+ G +V + VDP+L + LR HQREGVQF++ECV G+
Sbjct: 217 PNAPNALIMKRPDSCPK--GKQIVDVVVDPVLSKHLRDHQREGVQFLYECVMGMRCEG-- 272
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G I+AD+MGLGKTLQ+I LL+TL+ Q D P++KKA+IV P LV NW+ E +KW+
Sbjct: 273 EGAIMADEMGLGKTLQTITLLWTLMKQNPIHDSPPLIKKALIVCPAGLVDNWKREFRKWL 332
Query: 267 GG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
G RV + L D I +FT S ++IV YE R+ + D++I
Sbjct: 333 GNERVGVFVL-----DAKNKKIANFTM-GKSYNIMIVGYEMLRIVQEELKKGSGVDIVIA 386
Query: 326 DEAHRLKND--------QTLTN-----------RNDLEEFFAMVNFTNPGILGDAAYFRR 366
DE HRLK Q+L +NDL EF+ ++F NPG+LG + F+R
Sbjct: 387 DEGHRLKTASNKAMLAIQSLNTERRIILSGTPLQNDLGEFYTAIDFVNPGLLGQRSAFKR 446
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+E I+ R+P A+E E + G R EL + +QF++RRT +LS +LPPK +V C+
Sbjct: 447 SFELPIMRSRQPDASEAELEKGEARWKELVSLTSQFMIRRTAEVLSKYLPPKTEHIVFCR 506
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
T Q+E Y + S + A+ L I LKK+CN P L+ + + + +
Sbjct: 507 PTKGQAETYRAILGSPTFRLALGS---TDIALQLINVLKKVCNSPSLLKSSKDNDDTPSE 563
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
+ I P ++ S + S K+ +L L+ + T+++IV+VSNYT
Sbjct: 564 MLQSIIPLIPSKILSSSA------------SSAKLRLLDSLIHSIYTTTEEKIVIVSNYT 611
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNL 605
TLD+ +L Y +LRLDG+T SKRQ LV FN P F FLLS+K+GG GLNL
Sbjct: 612 TTLDMIERLLVSLSYTFLRLDGSTPASKRQSLVEKFNKTPKTTSFAFLLSAKSGGVGLNL 671
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
IG +R+VLFD DWNPA D QA AR+ RDGQK +YRFL G ++EK+YQRQ+ K GL
Sbjct: 672 IGASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLVQGGLDEKIYQRQVMKMGLA 731
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
+ D+ A+ +F S E+LRDLF + + H+ + CT
Sbjct: 732 NAV----VDNKASASSF-SQEELRDLFRLDEREGCQTHDLLGCT 770
>gi|340720108|ref|XP_003398485.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B-like [Bombus terrestris]
Length = 824
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 242/668 (36%), Positives = 345/668 (51%), Gaps = 90/668 (13%)
Query: 170 NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
N + VD LV LRPHQR G+ F++EC+ GL + G ILAD+MGLGKTLQ I ++
Sbjct: 217 NETEVFVDTCLVNVLRPHQRHGIVFLYECIMGL-KISNYFGAILADEMGLGKTLQCITII 275
Query: 230 YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGID 288
+TLL +G G P++K +IVTP+ L ++W E K W+G R+ + D +
Sbjct: 276 WTLLKKGPYGYPILKYILIVTPSCLCNSWNKEFKHWLGFHRISPYVV------DAKNKTK 329
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD-----LLICDEAHRLKND-----QTLT 338
F + V+I+SY+ C + + L+ICDE HRLKN+ + L
Sbjct: 330 DFKKHIRN-SVMIISYDMLT------RCEQEVEEIPFNLIICDEGHRLKNNDIKAAKILH 382
Query: 339 N--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
N +N+L+EFF +++F NP ILG + F+ YYE I+ + PTA +
Sbjct: 383 NLKCKRRIILTGTPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHV 442
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
LG ER++EL K FILRRT ++ +LP K +V C+L+ Q +LY+ S
Sbjct: 443 VSLGTERANELREKTKCFILRRTQETINKYLPSKHELIVFCRLSIEQQDLYSQVTDSWFN 502
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
K + L ITALKK+CNHP+L Y N T F CI G
Sbjct: 503 KNPSNNNISH---LTVITALKKICNHPELFY------NEKTELF--CID------SKGIH 545
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
+ D GK+ ++ LL + + +T++++VLVS YTQTLD+ +C +L
Sbjct: 546 KTSNIKDSTKTVYYGKISIVQTLLRNXK-KTEEKLVLVSYYTQTLDILETVCNREGLQFL 604
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDG+T+ + R K++ FN + N VFLLS+KAGG GLNL G +RL+LFD DWNPA+D
Sbjct: 605 RLDGSTTSNTRSKIIERFNSTNDNSKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDS 664
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA AR+WRDGQKK V+I R L+TGTIEEK++QRQ+SK L + + D + + LS
Sbjct: 665 QAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETV----VDLNPSSSFKLS 720
Query: 685 TEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIG 744
+L+DLFT + H+ M C+ C Y E+ E
Sbjct: 721 MSELKDLFTLAANTNCLTHDLMKCS-CNGYKKSEET-----------------SEKLHQK 762
Query: 745 GFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQ----ASAGDEVTFVF 800
G G K S + L+ W H Y + D I+Q + D +TF+
Sbjct: 763 GATGYQFLEDKTLKSNFTINQLLK-----WEH--YQQPISDKIIQEIMLSEVSDNITFIL 815
Query: 801 TNQVDGKL 808
N V ++
Sbjct: 816 KNSVVNRI 823
>gi|334321546|ref|XP_003340126.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Monodelphis domestica]
Length = 966
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/492 (43%), Positives = 279/492 (56%), Gaps = 76/492 (15%)
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLKN + T + NDL E+F++V+F N GILG A F++++
Sbjct: 520 GHRLKNSENQTYQALNGLHTSRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKHF 579
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ GR+ A+E ++ G ER EL VN+ ++RRT+ +LS +LP KI +VVCC+LT
Sbjct: 580 ELPILKGRDADASEAARQKGEERLQELVNVVNRCLIRRTSDILSKYLPVKIEQVVCCRLT 639
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
PLQ+ELY F+ + E L+ IT+LKKLCNHP LIYD GF
Sbjct: 640 PLQTELYRRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPGLIYDKCVEEE---EGF 696
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
+ FPP +SG+S +LSGKM VL +L RQ + D++VLVSNYTQT
Sbjct: 697 AGALALFPPG-YSGKS--------VEPQLSGKMLVLDYILAVTRQTSSDKVVLVSNYTQT 747
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
LDLF +LCR RRY Y+RLDGT SI KR K+V FN PS +F+F+LSSKAGGCGLNLIG
Sbjct: 748 LDLFEKLCRLRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFIFMLSSKAGGCGLNLIGA 807
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L +
Sbjct: 808 NRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQTHKKALSSCV 867
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETN 728
E+ D + S +LR+LFT ++ S+ H+ +HC RC N
Sbjct: 868 VDEEQDVA----RHFSLGELRELFTLNEATASDTHDKLHCRRCVNG-------------- 909
Query: 729 SANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAIL 788
H+++ + G+ DL W H +PDA+L
Sbjct: 910 -------------------------HQVRPPAE--GSDCTSDLAQWHHSADKRGIPDAVL 942
Query: 789 QASAGDEVTFVF 800
A+ VTF F
Sbjct: 943 LAAWDAAVTFAF 954
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADD 216
V + VDP+L + LRPHQREGV+F++ECV+ N G HGCI+AD+
Sbjct: 257 VHVVVDPILGKVLRPHQREGVRFLWECVTS-RNIPGSHGCIMADE 300
>gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti]
gi|108882255|gb|EAT46480.1| AAEL002341-PA [Aedes aegypti]
Length = 851
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 251/698 (35%), Positives = 356/698 (51%), Gaps = 92/698 (13%)
Query: 149 LPPGVDPLVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVSGL- 202
+PP PLV+ QP N L +TV L + LRPHQREGV F++ECV G
Sbjct: 205 IPPDFVPLVMSQPSFEHQWKYNQKKAPLSKVTVPYALSKHLRPHQREGVSFLYECVLGFR 264
Query: 203 LNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
A G ILAD+MGLGKTLQ I+L+YTL+ QG +P++K+ +IVTP+SL+ NW+ EI
Sbjct: 265 YTDADRFGAILADEMGLGKTLQCISLIYTLMKQGPYSQPILKRILIVTPSSLMENWDREI 324
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPC------SSLQVLIVSYETFRMHSSKFSC 316
KW+ + + + I S T+P + + +LI+SYE +
Sbjct: 325 SKWLKT------------ERIFTFIVSPTNPLKKYAQSAHIPILIISYELLSKQIRELD- 371
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
S DL+ICDE HRLKN T+ +NDL+EF++++ F NPG+
Sbjct: 372 SVKFDLMICDEGHRLKNSAIKTSSILDAVECPRRILLTGTPIQNDLQEFYSLITFVNPGL 431
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG + F+ +E I+ ++P LG R EL++ + FILRRT +++ +LP
Sbjct: 432 LGTYSEFKTKFENPILQSQQPGVLPMFANLGKARLEELNSITSSFILRRTQEVINKYLPG 491
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIY 475
K V+ C + LQ L I E++ +S L IT LKK+CNHP LI
Sbjct: 492 KQEAVIFCHPSKLQETLLRTAIQ-------FYEKSDRSTYFPLQLITVLKKICNHPSLIA 544
Query: 476 DT--IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
T I G D + PP G + S GK+ VL LL L Q
Sbjct: 545 STEKIDVGGSLIKLLNDNL---PPWQDMGPTDS------------GKLAVLDSLLETLIQ 589
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
R ++ V+VS Y +TLD+ LC Y Y RLDG+T R K+V+ FN PS + F+FL
Sbjct: 590 R-QEKAVIVSYYGKTLDMIMGLCEHYNYKYCRLDGSTPSQDRCKIVSSFNSPSSDTFIFL 648
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LS+KAGG GLNL G +RL+L+D DWNPA+D QA +R+WRDGQ + VFIYR ++ +IEEK
Sbjct: 649 LSAKAGGIGLNLTGASRLILYDNDWNPASDLQAMSRIWRDGQTRNVFIYRLITAFSIEEK 708
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
+YQRQ+SK L + + + S + S E+L+DLF F DD + M C
Sbjct: 709 IYQRQISKTSLSGTVVDLKQNLSNLK---FSDEELKDLFFFTDDNDDCLTHQMLGCGCGG 765
Query: 714 YDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNN 773
E +E + ++S ++ A H L+ E L
Sbjct: 766 VGGVPEPTASLNEKENVCSPERSKFQIRTAK--AKAGKAKHSLQMQE----------LMR 813
Query: 774 WGHHFYSMSVPDAILQA----SAGDEVTFVFTNQVDGK 807
W H Y V + +L+ + +E+ F+F NQV+ +
Sbjct: 814 WEH--YRSPVSERVLKELSLDACSEEIVFIFRNQVNQR 849
>gi|121700957|ref|XP_001268743.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus
NRRL 1]
gi|119396886|gb|EAW07317.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus
NRRL 1]
Length = 976
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 249/617 (40%), Positives = 336/617 (54%), Gaps = 67/617 (10%)
Query: 151 PGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG 210
PG LV+ +PE G +V + VDP+L + LRPHQREGVQF++ECV G+ + G G
Sbjct: 254 PGA--LVMKRPESVPK-GKQIVDVVVDPILSKHLRPHQREGVQFLYECVMGMRSFNG-EG 309
Query: 211 CILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
ILADDMGLGKTLQ+I LL+ LL Q D P++KKA+IV P +L++NW E +KW+G
Sbjct: 310 AILADDMGLGKTLQTITLLWMLLKQNPIHDSAPVIKKALIVCPVTLINNWRKEFRKWLGN 369
Query: 269 -RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
R+ + DD + FT + V+IV YE R + D++I DE
Sbjct: 370 ERIGVFVF-----DDKRKRLTDFTK-GRAYSVMIVGYEKLRTVQEGLARGAGVDIVIADE 423
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
HRLK Q + + NDL+EFFA V+ NPGILG F + +
Sbjct: 424 GHRLKTLQNKSGQAIQALNATKRIILSGTPIQNDLKEFFAAVDLVNPGILGTFKAFVKEF 483
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E I+ R+P AT +E + G R+ EL ++F+LRRT +L+ +LPPK V+ C T
Sbjct: 484 EGPIVRSRQPEATRKEIEKGEARNEELRELTSKFMLRRTADILAKYLPPKSEYVLFCNPT 543
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-- 486
Q+ +Y + + S + AI L IT LKKLCN P L+ P T
Sbjct: 544 STQANIYRNVLASPVFQCAIGNS---ENALHLITILKKLCNSPSLLSPKNADETPSETIA 600
Query: 487 -----GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
+ +R F P S K+ VL +LL +LR T ++IVL
Sbjct: 601 ALLSSLPPNLLRHFSPSS------------------SAKIRVLDQLLHNLRTSTSEKIVL 642
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGG 600
VSNYT TL+L A L P+LRLDG+T KRQ LV FN P+ F FLLS+KAGG
Sbjct: 643 VSNYTSTLNLLANLLSSLSLPFLRLDGSTPAQKRQSLVEDFNRLPADLCFAFLLSAKAGG 702
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLNLIG +RLVLFD DWNPA D QA AR+ RDGQK+ IYR L G++EEK++QRQ++
Sbjct: 703 TGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 762
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
K GL + + + SS Q S ++LRDLF ++ R + HE + C C +S
Sbjct: 763 KIGLADSVMEHK--SSVAQ---FSRDELRDLFRLDEESRCQTHELLGCD-CGGTGRTVQS 816
Query: 721 IGEGDETNSANKNDQSD 737
T++ +K+ SD
Sbjct: 817 ASSVPPTDAESKDPTSD 833
>gi|343424755|emb|CBQ68293.1| related to RAD54-DNA-dependent ATPase of the Snf2p family
[Sporisorium reilianum SRZ2]
Length = 1065
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/620 (37%), Positives = 329/620 (53%), Gaps = 63/620 (10%)
Query: 151 PGVDP-----LVLWQPEEPQN-----DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVS 200
P DP +V+ +P+E G +V + +DP L + LRPHQ EGV+F++E V
Sbjct: 299 PRFDPNEPGAIVMKRPDESHQRRYNPKGRPIVDVVLDPQLTKALRPHQVEGVKFLYERVM 358
Query: 201 GL-LNAAGIHGCILADDMGLGKTLQSIALLYTLL---CQGFDGKPMVKKAIIVTPTSLVS 256
G+ + G ILAD+MGLGKTLQ+IAL+ TL+ C +++ +IV P +LV
Sbjct: 359 GMHADGEKGQGAILADEMGLGKTLQTIALVLTLMKQSCYYTSKSCTIERTMIVCPLTLVK 418
Query: 257 NWEAEIKKWVGGRVQLIALC---ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSK 313
NW+ E KW+G L LC RDDV + S + VL++ YE R
Sbjct: 419 NWKREFNKWIGTN-SLNVLCIDDGRGRDDVERFVRS-----KAYHVLVIGYEKLRSCIDI 472
Query: 314 FSCSES-CDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFT 353
++ DL++CDE HRLK+ T + N+L E +AM++F
Sbjct: 473 VKTAQPPIDLIVCDEGHRLKSKDAQTTQMFAELSTKRKIILSGTPIQNNLSELYAMIDFV 532
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
PG+L + F+ +E I+ R +++ K G R + L ILRRT +L+
Sbjct: 533 VPGLLVNPEAFKTMFEEPILRSRAKHCSKQTKATGQARLNALMTITKDVILRRTADILTK 592
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKL 473
LPPK V+ C + Q +Y + S +V+ + + L I L+KLCN P+L
Sbjct: 593 FLPPKKEMVLFCSPSQEQIRIYQSILGSSDVRSLLRGDAGNG--LLQIGVLRKLCNTPEL 650
Query: 474 IY-DTIKSGNPGTTGF-EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL 531
+ DT S + T D RFFPP + SGK+ + LL +
Sbjct: 651 LLKDTESSADSATKALVGDLTRFFPPNFVRNEA-----------RFSGKLTCVMDLLQTV 699
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEF 590
R +TDD++VLVSN+T TLD+ + R++RYPYLRLDG T +R +VN FN + N F
Sbjct: 700 RAQTDDKVVLVSNFTSTLDIVEAMMRKKRYPYLRLDGKTPQDERMLMVNQFNREGVDNSF 759
Query: 591 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 650
VFLLS+K+GG GLNLIG NRLVL D DWNP+ D QA AR+ RDGQ+K +IYR L +GT+
Sbjct: 760 VFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQRKPCYIYRLLLSGTM 819
Query: 651 EEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR 710
+EK+YQRQ+SK GL + + S++ + S E+LRD+FT H D H + C
Sbjct: 820 DEKIYQRQISKLGLSDSLMNAEKKSAS---DTFSQEELRDIFTLHLDSTCISHRQLLCD- 875
Query: 711 CQNYDDGAESIGEGDETNSA 730
C A S G G +SA
Sbjct: 876 CDGKGGSANSNGPGQPGSSA 895
>gi|406606250|emb|CCH42357.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
Length = 905
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/561 (40%), Positives = 309/561 (55%), Gaps = 58/561 (10%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ +DP L + LRPHQ +GV+F++EC+ L G G +LADDMGLGKTL +I L+TLL
Sbjct: 270 VVIDPFLGKKLRPHQVQGVKFLYECLMDLRGFDG-QGALLADDMGLGKTLMTITTLWTLL 328
Query: 234 CQ---GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV-GGRVQLIALC-ESTRDDVVSGID 288
Q GF+ P+V K +I P +L+ NW+ E KKW+ R+ ++ L ++T +
Sbjct: 329 KQSPKGFE-TPVVNKVLIACPVTLIGNWKREFKKWLPMNRLNVLTLSSKNTTSKDKQDVK 387
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND-----QTLTN---- 339
+F QVLI+ YE + S+ DLLICDE HRLKN+ Q L +
Sbjct: 388 NFAR-TKVYQVLIMGYEKILNMKDELKLSK-FDLLICDEGHRLKNNSNKTLQVLNSLEIS 445
Query: 340 ----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE-KKLG 388
+NDL EFF +++F NPGILG+ F+R + I+ RE E K G
Sbjct: 446 KKILLSGTPIQNDLSEFFNIIDFINPGILGNFNQFKRNFMNPILKSRETNCINPEIKSKG 505
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
E+S EL FILRRT+A++SNHLPP+ V+ C+ T LQ L+N + S N I
Sbjct: 506 NEKSQELIDITKPFILRRTSAIMSNHLPPRTDIVLFCRPTNLQINLFNEVLGSTNFDNMI 565
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
S+ T S L+ IT KK+CN P LI + + I
Sbjct: 566 SKTT-ASGSLSLITMFKKICNSPSLIINDKTFNQISDVKISNQIT--------------- 609
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
SGK+ VL LL + +T+++++LVSNYTQTLD+ + + Y RLDG
Sbjct: 610 ---------SGKIQVLIELLNEISSKTNEKVILVSNYTQTLDILQNILLKLNLTYQRLDG 660
Query: 569 TTSISKRQKLVNHFNDPSK-NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
+T R +VN FN S + F FLLSSK+GG GLNLIG +RL+LFD DWNPA D QA
Sbjct: 661 STPNKDRDSIVNTFNTTSSISNFAFLLSSKSGGVGLNLIGASRLILFDNDWNPAIDLQAM 720
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED 687
AR+ RDGQKK VFIYR ++TG I+EK+ QRQ+ K L Q +S + + + D
Sbjct: 721 ARIHRDGQKKPVFIYRLVTTGCIDEKILQRQLMKNNLSDKFLDNQKNS---KDDLFDSID 777
Query: 688 LRDLFTFHDDVRSEIHENMHC 708
L+DLFT + S H+ M C
Sbjct: 778 LKDLFTLNLSTNSNTHDLMRC 798
>gi|50553882|ref|XP_504352.1| YALI0E24431p [Yarrowia lipolytica]
gi|49650221|emb|CAG79951.1| YALI0E24431p [Yarrowia lipolytica CLIB122]
Length = 940
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 244/639 (38%), Positives = 351/639 (54%), Gaps = 77/639 (12%)
Query: 129 TNRLDLPRTVE--NNVIEENFTLPP-----GVDPLVLWQPEE--PQNDGGNLVPITVDPL 179
TN P +VE + V+ E +TLP V L + P++ +N + + +DPL
Sbjct: 255 TNDTPEPLSVEATSAVVTETYTLPAPTTFKAVKRLRVKLPQKITEENFATFIQDVKIDPL 314
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FD 238
L LRPHQRE V F++ CV G +G +G +LAD+MG+GKTL SIAL++TLL Q
Sbjct: 315 LNTALRPHQREAVDFLYRCVMGFNPTSG-YGALLADEMGMGKTLMSIALIWTLLKQTPLK 373
Query: 239 GKP-MVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTDPCSS 296
G+P + K+ +IV P +LV+NW+ EIKKW+G R+ ++A+ +S D+ + I FT +
Sbjct: 374 GEPPLAKRVLIVCPVTLVNNWKTEIKKWLGPSRLGVMAITDSMSIDLGTVIRDFTYGRVN 433
Query: 297 LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND--------QTL----------- 337
QV+I+ YE S + S + DL+ICDE HR+K Q+L
Sbjct: 434 -QVMIIGYERLLRISDQLQ-SANFDLVICDEGHRMKTAGNKAANAIQSLGVARKIILSGT 491
Query: 338 TNRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
+NDL+EFF MV+F NPG+LG F + Y I+ R P A E + G ++S+ LS+
Sbjct: 492 PIQNDLKEFFVMVDFLNPGLLGSFQQFNKDYIIPIVRSRAPDAFPSELEKGQKQSARLSS 551
Query: 398 KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI 457
QFILRRT +LS LPPK V+ C Q+E+Y + S+ + R E Q
Sbjct: 552 ITGQFILRRTADILSRFLPPKTETVLFCLPNAQQTEIYTK-LSSEYLNRL---ERHQVDS 607
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
I +L+K+CN P L+ ED P + SG+ A++
Sbjct: 608 FKSILSLRKVCNSPILLS-------------EDG-----PALDSGK---------AYLRN 640
Query: 518 SGKMHVLARLLGHLRQRTD------DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
SGKM+ L R++G LR R +++V+VS++TQTLD+ L ++ + + RLDG+
Sbjct: 641 SGKMNTLFRMIGQLRARNKMDPDNAEKVVIVSSFTQTLDVIEGLVKDLKLSFTRLDGSVQ 700
Query: 572 ISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
S R K+V FN S + FVFLLS++AGG G+NLIG +RL LFDPDWNPA D QA AR+
Sbjct: 701 ASARAKIVKQFNSSSADSCFVFLLSARAGGVGINLIGASRLFLFDPDWNPAVDLQAMARI 760
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
RDGQKK V+IYR L+TG I+EK++QRQ K GL + + + + + E+L+
Sbjct: 761 HRDGQKKPVYIYRLLTTGCIDEKIFQRQTIKTGLANSLIE-----GTEEADTFTDEELKK 815
Query: 691 LFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNS 729
LF+ H+ M C N D E + E T +
Sbjct: 816 LFSMDVLTHCNTHDLMECKCEHNGGDLGEVVEEVQVTKA 854
>gi|407919440|gb|EKG12686.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 931
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/577 (38%), Positives = 323/577 (55%), Gaps = 53/577 (9%)
Query: 156 LVLWQPEEPQN--DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
LV+ +P P N G +V + VDP+L + LR HQR+GVQF++ECV G+ A G IL
Sbjct: 249 LVMTRPL-PMNVPKGKQIVDVVVDPVLSKHLRDHQRQGVQFLYECVMGM-GAYNGQGVIL 306
Query: 214 ADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQ 271
AD+MGLGKTLQ+I L++TLL Q +D P+VKKAIIV P +VSNW E +KW+G
Sbjct: 307 ADEMGLGKTLQTITLVWTLLKQNPIYDDPPVVKKAIIVCPAGVVSNWRREFRKWLGNERL 366
Query: 272 LIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
+ + + +R + D C S V+I+ YE DL++ DE H+L
Sbjct: 367 GVFVADESRKRLT---DFTRGKCYS--VMIIGYEKLLKSHEDIKSQCDVDLVVLDEGHKL 421
Query: 332 KNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
K + T + N+L EF A+ + NPG+LG F+R +E I
Sbjct: 422 KTAKGKTAQAIRNLGTDRVVLLSGTPFSNNLLEFHAVADLVNPGVLGKLNAFKREFEGPI 481
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
+ G++P AT E++ G R EL QF+LRRT +LS +LP K V+ C+ T Q+
Sbjct: 482 VKGQQPDATCSEREKGAARHEELDKLSKQFMLRRTADILSKYLPSKTEHVLLCRPTTAQA 541
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
E+Y + S A+ L I LK++CN PKL+ P T +
Sbjct: 542 EVYRRVLASPAFGAALGS---NDNALQLINVLKQVCNSPKLLSYAKNENTPSPT-IAAIL 597
Query: 493 RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLF 552
P ++ + SG+ S K VL LL + T++++V+VS+YT TLD+
Sbjct: 598 ENIPAKLLN--SGA-----------SAKFQVLDSLLHRIHTTTNEKVVIVSHYTSTLDIL 644
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRL 611
L Y +LR+DG+T +KRQ+++N FN+ N+ F FLLS+KAGG G+NL G +RL
Sbjct: 645 GGLLTSLSYTFLRVDGSTPANKRQEMINKFNNSDANKHFAFLLSAKAGGVGINLTGASRL 704
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
VL+D DWNPA+D QA AR+ RDGQK+ IYR L+ G ++EK+YQRQ++K+GL +
Sbjct: 705 VLYDIDWNPAHDLQAMARIHRDGQKRPCKIYRLLTMGALDEKIYQRQVTKQGLADSVIDS 764
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+T SS+ + E+L+DLFT +D R + HE + C
Sbjct: 765 KTSSSSF-----TKEELQDLFTLNDGHRCQTHELICC 796
>gi|296808475|ref|XP_002844576.1| RAD54B protein [Arthroderma otae CBS 113480]
gi|238844059|gb|EEQ33721.1| RAD54B protein [Arthroderma otae CBS 113480]
Length = 960
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 235/565 (41%), Positives = 320/565 (56%), Gaps = 58/565 (10%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + VDP+L + LR HQREGV+F++ECV GL + G G ILAD+MGLGKTLQ+IA
Sbjct: 291 GKQVVDVVVDPILGKHLREHQREGVKFLYECVMGLRSFNG-EGAILADEMGLGKTLQTIA 349
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQL-IALCESTRDDV 283
L++TLL Q + +P++KKA+IV P +L++NW+ E KKW+G R+ + +A +STR
Sbjct: 350 LIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKSTR--- 406
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT------- 336
+ FT S V+I+ YE R + + + D+++ DE HRLK Q
Sbjct: 407 ---LSDFTM-GRSYSVMIIGYERLRSVQEQLTKGSAIDIVVADEGHRLKTVQNKCAQAIQ 462
Query: 337 ---LTNR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
T R N+L EFFAMV+F NP +LG F + +E I+ R+P A ++
Sbjct: 463 SLNTTRRVILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMKEFEGPIVGARQPNAPKKV 522
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+ G RS EL+ + FILRRT +LS HLPPK ++ C T Q LY H + S
Sbjct: 523 IEKGKARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQKNLYRHVLASPLF 582
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ + L IT LKK PKL D G T I P + S
Sbjct: 583 QSVLRNS---ESALQLITILKK----PKLEDD----GKGEDTSMSAFISSLPHNLHRCLS 631
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
SGK+ VL +LL +LR +T +++VLVSNYT TL+L A L P+L
Sbjct: 632 AGS----------SGKIRVLDQLLYNLRNKTTEKVVLVSNYTSTLNLLANLLTSLDLPFL 681
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
RLDG+T +KRQ LV+ FN S + F FLLS+KAGG GLNLIG +RLVLFD DWNPA D
Sbjct: 682 RLDGSTPATKRQALVDDFNRSSPSACFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATD 741
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA AR+ RDGQK+ IYR L G IEEK++QRQ++K GL + ++ +
Sbjct: 742 LQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMDQKGGIA-----HF 796
Query: 684 STEDLRDLFTFHDDVRSEIHENMHC 708
S E+L+DLF + + + HE + C
Sbjct: 797 SQEELKDLFRLDESSQCQTHELLGC 821
>gi|312376441|gb|EFR23522.1| hypothetical protein AND_12719 [Anopheles darlingi]
Length = 875
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 252/702 (35%), Positives = 364/702 (51%), Gaps = 88/702 (12%)
Query: 153 VDPLVLWQP-------EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA 205
V+PL + +P P N+ + + V L R LRPHQR+GV F++ECV+G+
Sbjct: 215 VEPLFMKKPSFEHRFHHNPNNEL-TVADVQVPACLARHLRPHQRDGVAFLYECVTGMRMM 273
Query: 206 ---AGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
G +G ILAD+MGLGKTLQ I+L+YTLL G GKP+ ++ +IVTP+SLV NW+ EI
Sbjct: 274 EPPGGYYGAILADEMGLGKTLQCISLMYTLLKTGPYGKPLARRILIVTPSSLVENWDREI 333
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
KW+ +L + + S P VLI+SYE + + DL
Sbjct: 334 TKWLRNE-RLFTFIVGPHNKLRLYAQSLHIP-----VLIISYEMLAKQIDELETVK-FDL 386
Query: 323 LICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAY 363
+ CDE HRLKN +T +NDL EF++++NF NPG+LG
Sbjct: 387 IFCDEGHRLKNSNVKVFGVLSKLECRRRVLITGTPIQNDLAEFYSLINFVNPGLLGSYQD 446
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F+ YET II + P + +LGIER +EL+ +F+LRRT +++ +LP K V+
Sbjct: 447 FKARYETPIIISQRPGVLPQSIELGIERLNELNVITGRFVLRRTQEVINRYLPEKHELVI 506
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C + LQ++L + +R+ S L IT LKK+CNHP L+
Sbjct: 507 FCHPSELQTQLLRTALTFYEEERSGSNAITP---LQLITILKKICNHPSLV--------- 554
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
TG D P + + S K+ ++ LL L + +++V+VS
Sbjct: 555 KVTGRGD-----PESLLHRLADQLPDWQAMGPSDSAKLAIVDTLLEDLIVK-QEKVVIVS 608
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
Y +TLD+ A LC Y + RLDG+T S R K+V FN+ + + F+ LLS+KAGG GL
Sbjct: 609 YYNKTLDMIAGLCEHYNYKHSRLDGSTVASDRSKIVATFNNAASDIFILLLSAKAGGAGL 668
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NLIG +RLVL+D DWNPAND QA +RVWRDGQ + VFIYR L+ +IEE+++QRQ+SK
Sbjct: 669 NLIGASRLVLYDNDWNPANDLQAMSRVWRDGQTRTVFIYRLLTAFSIEERIFQRQISKTS 728
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE---IHENMHCTRCQNYDDGAES 720
L + ++ + + Q S E+L+DLF+F D + H + C C G +
Sbjct: 729 LSGTVVDQKRNMNNLQ---FSDEELKDLFSFVDPQHANDCLTHSLLECP-CA----GIGT 780
Query: 721 IGEGDETNSANKNDQSDQEVTD------------IGGFAGLAGCLHKLKSSEKQLGTPLE 768
I E E +D+ D+ + D G++G K K + K
Sbjct: 781 IPE-PEVRDDEPSDELDRLLRDPPIALPSETESRYRVRHGVSGGRSKTKYALKM------ 833
Query: 769 EDLNNWGHHF--YSMSVPDAILQASAGDEVTFVFTNQV-DGK 807
++L W HH S SV + + + +EV F+F N V DGK
Sbjct: 834 QELMRWEHHRSPVSESVMEQLGLSGCSEEVVFLFRNIVSDGK 875
>gi|6599160|emb|CAB63724.1| hypothetical protein [Homo sapiens]
Length = 580
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/528 (42%), Positives = 313/528 (59%), Gaps = 69/528 (13%)
Query: 221 KTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCES 278
KTLQ I+L++TL CQG + GKP++KK +IVTP SLV+NW+ E +KW+G R+++ +
Sbjct: 1 KTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTV--- 57
Query: 279 TRDDVVSGIDSFTDPCSSLQVLIVSYETF-----RMHSSKFSCSESCDLLICDEAHRLKN 333
D ++ F VLI+SYE ++ + KF DLLICDE HRLKN
Sbjct: 58 ---DQDHKVEEFIKSIF-YSVLIISYEMLLRSLDQIKNIKF------DLLICDEGHRLKN 107
Query: 334 DQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
T +NDL+EFFA+++F NPGILG + +R+ YE II
Sbjct: 108 SAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIL 167
Query: 375 GREPTATEEEKKLGIERSS-ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
REP+A+EEEK+LG L A ++ LRRT +++ +LPPKI VV C+ LQ E
Sbjct: 168 SREPSASEEEKELGEREEQLNLLASLDSLYLRRTQEIINKYLPPKIENVVFCRPGALQIE 227
Query: 434 LYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG------ 487
LY ++S+ V+ + + S L I ALKKLCNHP L++++IK +T
Sbjct: 228 LYRKLLNSQVVRFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEK 287
Query: 488 --FEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ-RTDDRIV 540
++ + FP P +F+ + SGK+ VL++LL + + R +++V
Sbjct: 288 SLYKGLLSVFPADYNPLLFTEKE-------------SGKLQVLSKLLAVIHELRPTEKVV 334
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
LVSNYTQTL++ ++C+ Y Y RLDG T IS+RQ++V+ FN + F+FLLSSKAGG
Sbjct: 335 LVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGG 394
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGTIEEK+YQRQ+S
Sbjct: 395 VGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQIS 454
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
K+GL + S Q S E+L++LFT H+ H+ + C
Sbjct: 455 KQGLCGAVVDLTKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 499
>gi|156037672|ref|XP_001586563.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980]
gi|154697958|gb|EDN97696.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 938
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 231/607 (38%), Positives = 326/607 (53%), Gaps = 71/607 (11%)
Query: 151 PGVDPLVLWQPEEPQN--DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
P V ++ Q P++ G ++V + VDP L R LR HQ+EGV+F++ECV G + G
Sbjct: 269 PSVPGAIVMQRPNPKHLAKGKDVVDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNG- 327
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQGFDGK---PMVKKAIIVTPTSLVSNWEAEIKKW 265
G ILAD+MGLGKTLQ+IALL+TLL Q + ++KKA+IV P +L++NW+AE KW
Sbjct: 328 QGAILADEMGLGKTLQTIALLWTLLKQNPEHPNEGGVIKKALIVCPVTLIANWKAEFNKW 387
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
+G + + + +++ ++ FT S V+I+ YE R + D+++
Sbjct: 388 LGNERIGVFVADGSKNIRLT---DFTH-GKSYSVMIIGYEKLRTVQEELKKGGGIDIVVA 443
Query: 326 DEAHRLK-----NDQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRR 366
DE HRLK + Q + N +NDL EFF MV+F NPG+L F++
Sbjct: 444 DEGHRLKTAANKSAQAIRNLNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKK 503
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+E I+ R+P ATE + + G R EL+ FILRR ++L+ +L PK V+ CK
Sbjct: 504 CFEAPILKSRQPGATENDMEKGTAREEELADLTKLFILRRNASILAKYLKPKTEYVLFCK 563
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
T Q+E+Y H + S R + L IT LKK+CN P L+ + P +
Sbjct: 564 PTQAQAEVYQHVLASPVFGRVLGSSEAS---LQLITMLKKVCNAPSLLVKKSDTDTPSNS 620
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
+ PPE+ K V+A +LVSNYT
Sbjct: 621 NVAQLLESIPPEILK------------------KNIVVAS-------------ILVSNYT 649
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNL 605
TLDL P+LRLDG+T +KRQ LVN FN P+ F FLLS+K+GG G+NL
Sbjct: 650 STLDLLMSHLSSLNLPFLRLDGSTPQAKRQDLVNTFNKTPASKYFAFLLSAKSGGAGINL 709
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
IG +RLVLFD DWNPA D QA AR+ RDGQK+ V IYRFL +G ++EK+YQRQ++K GL
Sbjct: 710 IGASRLVLFDVDWNPATDLQAMARIHRDGQKRSVKIYRFLMSGGMDEKIYQRQVTKIGLA 769
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGD 725
+ D + +F S ++LRDLF + R + HE + C C+ ESI
Sbjct: 770 DSVM----DGKKNEASF-SADELRDLFRLDMNARCQTHELLGCG-CEG-SGREESIAMAS 822
Query: 726 ETNSANK 732
E + +K
Sbjct: 823 EISVVDK 829
>gi|392579506|gb|EIW72633.1| hypothetical protein TREMEDRAFT_36825 [Tremella mesenterica DSM
1558]
Length = 1048
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 319/569 (56%), Gaps = 83/569 (14%)
Query: 171 LVPITVDPLLVRFLRPHQREGV--------------QFMFECVSGLLNAAGIHGCILADD 216
++ + +DPLL +RPHQ EGV QFM++CV G+ + A GCILAD+
Sbjct: 312 IIDVVLDPLLTSIMRPHQHEGVKASRRYTGRYLANRQFMYKCVMGM-SGAEAEGCILADE 370
Query: 217 MGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
MGLGKTLQ+I L+YT+L Q + + +K +IV P +LVSNW E KKW+ +V ++A
Sbjct: 371 MGLGKTLQTIGLIYTMLKQSPFANQGHIAQKILIVCPVTLVSNWRKEFKKWLQNKVGVVA 430
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
D I +F L+ +I SC +L++CDE HRLK+
Sbjct: 431 A-----DGSDWQISNF------LRKVIKQLA---------SCQPPIELIVCDEGHRLKSK 470
Query: 335 QTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
T + NDL E++AMVNFT PGILG F + YE I+
Sbjct: 471 DNKTTKMFEALRTSRRIILSGTPVQNDLGEYWAMVNFTCPGILGTYPSFNKRYEKKILRS 530
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
R P A++ E + G+E+++ELS +F+LRRT +LSN+LPP+ V+ LQ E++
Sbjct: 531 RMPGASKAEVENGMEQAAELSKLSEKFVLRRTADVLSNYLPPRHDYVIFVAPATLQLEVF 590
Query: 436 NHFIHSK---NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP---GTTGFE 489
+ ++ N RA S LA I +L+K+ N P L+ + P TG E
Sbjct: 591 SRLLNPSLLGNFLRAGSGMMS----LALIDSLRKVSNSPSLLRKKDEESIPLDEIGTGRE 646
Query: 490 DCIRFFPPEMFSGRSGSWTGGDGAWVEL--SGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
+ ++ P D + V+L SGK+ VL RLL LR + +++V+VSN+T
Sbjct: 647 EALKIIPK-------------DTSVVDLDSSGKLIVLVRLLQSLRGASGEKVVVVSNWTS 693
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK-NEFVFLLSSKAGGCGLNLI 606
TLD +C+ + Y +LRLDG T RQ LV FN S+ + FVFLLS+KAGG GLNLI
Sbjct: 694 TLDFIEGMCKVKSYSFLRLDGKTPTKTRQTLVEQFNRGSQLDSFVFLLSAKAGGVGLNLI 753
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G +RLVLFD DWNP+ D+QA R+ RDGQKK V+IYRFL+ TI+EK+YQRQ++K+GL
Sbjct: 754 GASRLVLFDSDWNPSTDRQAMGRIHRDGQKKPVYIYRFLTACTIDEKIYQRQITKDGLSD 813
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
+ + T+ +F E LRD+FT +
Sbjct: 814 QMLDGGQATGQTKDSFTLAE-LRDIFTLN 841
>gi|402219506|gb|EJT99579.1| hypothetical protein DACRYDRAFT_109677 [Dacryopinax sp. DJM-731
SS1]
Length = 1072
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 314/569 (55%), Gaps = 57/569 (10%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ-----SIAL 228
+ VDP+L LRPHQREGV FM+E V G+ G G ILAD+MGLGKTLQ +IAL
Sbjct: 367 VVVDPVLATKLRPHQREGVIFMYEAVMGMRRHEGF-GAILADEMGLGKTLQASSNKTIAL 425
Query: 229 LYTLLCQG--------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
L+TLL Q + K + KA+IV P SLV NW +EI KW+G + + E T
Sbjct: 426 LWTLLRQTPYRPREPIYHHKGEIGKAMIVCPVSLVGNWRSEIWKWLGRDRMGVFVAEET- 484
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQTLTN 339
+ I F + VLI+ YE R S+ DL+ICDE HRLK+ T+
Sbjct: 485 ----NKIKQFLN-SRGHDVLIIGYEKLRSVIDMLVYSDPMIDLIICDEGHRLKSSNNKTS 539
Query: 340 R-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+ NDL EF++M F NPG+LG F+R YE I+ R P
Sbjct: 540 QMFTALKTKRRIILSGTPIQNDLSEFWSMAEFCNPGLLGQYNDFKRIYEQPIVRARAPNC 599
Query: 381 TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
TE+ K++G RSS+LS+ F+LRRT +L+++LPPK V + T +Q +L +
Sbjct: 600 TEKNKEIGEARSSQLSSTAKSFVLRRTADILTSYLPPKYEYVAFIRPTKVQIDLMQRVLT 659
Query: 441 SKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF 500
S+ + RA+ Q+ L ++ L K+C P L+ T K + +++ + P M
Sbjct: 660 SQAIGRALRNGMAQA--LEMMSILGKICTSPVLLKTTAKPPSQWAPEYQEIVSRLPRHME 717
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
S SGK+ L LL +R+ T++++++VS +T+TLD+ +C + R
Sbjct: 718 ESDS-----------SFSGKLIALMNLLDAVRKITEEKVIVVSQFTKTLDVVEAICTKMR 766
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
+ RLDGTT ++R V FN ++ E F+FLLS KAGG GLNL+G +RL+L D WN
Sbjct: 767 WTRERLDGTTPQNERDSRVQTFNRTNQAECFIFLLSLKAGGVGLNLVGASRLILLDSSWN 826
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
PA+D QA AR+ RDGQK+ V IYRFL+ GTI+EKVY RQ+ K GL + D A +
Sbjct: 827 PAHDLQAMARIHRDGQKRPVHIYRFLTVGTIDEKVYMRQVIKTGL--TLMAGDGDGKA-K 883
Query: 680 GNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
G+ + ++LRDLF H H+ + C
Sbjct: 884 GDSFTHDELRDLFRIHTHTPCHTHDLLDC 912
>gi|428180190|gb|EKX49058.1| hypothetical protein GUITHDRAFT_52900, partial [Guillardia theta
CCMP2712]
Length = 527
Score = 369 bits (946), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 215/580 (37%), Positives = 325/580 (56%), Gaps = 81/580 (13%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ +DP+L ++PHQ G +F+++ + + + GCILAD+MGLGKTLQSIAL++TL+
Sbjct: 1 VVLDPVLGMHMKPHQIAGTKFLYKNLMTKHPNSIVSGCILADEMGLGKTLQSIALIWTLM 60
Query: 234 CQG-FD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFT 291
Q F P+V+KAIIV P+SLV NW EIKKW+G + + + ++ F
Sbjct: 61 KQSPFSLTDPIVRKAIIVCPSSLVFNWANEIKKWLGDQRLSAQAITKGGTNASNDVNDFV 120
Query: 292 DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---DQTLTN--------- 339
+ +VLI+SY+ R H S ++ L++CDE +LKN ++T+ +
Sbjct: 121 K-GNVKRVLIISYDMLRRHIQMLSRYQNIQLVVCDEGQKLKNIDGNKTIDSLNALPCKMR 179
Query: 340 --------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
+NDL+EF+AMVN+ PG LG FR+ + +II R+ + +++ +++G +R
Sbjct: 180 ILLSGTPVQNDLDEFYAMVNWVCPGTLGAPKQFRKIFADAIIKSRDKSCSKDLQRIGKKR 239
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
EL + + +LRRT+ + +PPK +V+ C+ +PLQ ++Y + S +K+AI
Sbjct: 240 LKELIKRTSPIVLRRTSKDIVAQMPPKYEKVIFCRPSPLQKKIYKSLLSSSELKKAIEGN 299
Query: 452 TKQSKILAYITALKKLCNHPKL-----IYDTIKSGNPGTTGFEDCIR-FFPPEMFSGRSG 505
+ Q + I+ L K NHP L I D + + + F+ R FFP
Sbjct: 300 SGQV-VFTIISKLTKALNHPDLVTANQIEDEQNNNSNISLKFDINTREFFPSS------- 351
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
T+DR+V+VSNYT +LDL +C++ Y +R
Sbjct: 352 -----------------------------TNDRVVIVSNYTTSLDLVDTICKKLSYKTVR 382
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG+T ISKR +V+ FN+PS FVFLLSSKAGG GLNLIGGNR++L DP WNPA+D Q
Sbjct: 383 LDGSTEISKRSDIVSSFNNPSSGIFVFLLSSKAGGVGLNLIGGNRVILLDPSWNPAHDLQ 442
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A ARVWR GQ K VF+YR L+TGTIEE+++Q+Q+ K L+ +I + D++
Sbjct: 443 AMARVWRFGQPKPVFVYRLLTTGTIEERIFQKQIRKGELESLIMDDVGDAN----RHFDQ 498
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGD 725
DL+D+F F ++ T C YD A ++G+ D
Sbjct: 499 GDLKDIFIFSEN-----------TSCDTYDLLAPTLGKPD 527
>gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
Length = 1060
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 241/678 (35%), Positives = 344/678 (50%), Gaps = 82/678 (12%)
Query: 151 PGVDP-----LVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQFMFECVS 200
P DP +V+ +P+E N +V + +DP L + LRPHQ EGV+F++E V
Sbjct: 294 PRFDPNEPGAIVMKRPDERHQRAHNPKRRPVVDVVLDPQLTKALRPHQVEGVKFLYERVM 353
Query: 201 GLLNAAGIHG--CILADDMGLGKTLQSIALLYTLL---CQGFDGKPMVKKAIIVTPTSLV 255
G+ +A G G ILAD+MGLGKTLQ+IAL+ TL+ C +++A+IV P +LV
Sbjct: 354 GM-HADGTKGKGAILADEMGLGKTLQTIALILTLIKQSCYYTSKSSTIERAMIVCPLTLV 412
Query: 256 SNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
NW+ E +KW+G L LC D ++ F + V+++ YE R
Sbjct: 413 KNWKREFRKWIGSN-SLNVLCID-EDCGREHVERFAR-SKAYHVMVIGYEKLRSCIDIVK 469
Query: 316 CSES-CDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNP 355
++ DL++CDE HRLK+ T + N+L E +AM++F P
Sbjct: 470 TAQPPVDLIVCDEGHRLKSKDAQTTKMFDELSTERKIILSGTPIQNNLSELYAMIDFVIP 529
Query: 356 GILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHL 415
+LG F+ +E I+ R A++ K +G R L ILRRT +L+ L
Sbjct: 530 DLLGKPESFKTLFEEPILRSRAKHASKHAKAVGQARLGALMTVTKDIILRRTADILTKFL 589
Query: 416 PPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY 475
PPK V+ C + Q +Y + S V+ + + L I L+KLCN P+L+
Sbjct: 590 PPKHEMVLFCSPSEEQLRIYQAILGSSQVRSLL--QGAPGNGLLQIGVLRKLCNSPELLL 647
Query: 476 DTIKSG--NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
++ +P D RFFPP + GK+ + LL +R
Sbjct: 648 KDTEADADSPTKALVGDLTRFFPPNFVRNEA-----------RFGGKLICVMNLLQTVRA 696
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVF 592
+TDD++VLVSN+T TLD+ + R++RYPYLRLDG T +R +VN FN ++ FVF
Sbjct: 697 QTDDKVVLVSNFTSTLDIIEAMMRKKRYPYLRLDGKTPQDERMAMVNQFNREGVDKSFVF 756
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LLS+K+GG GLNLIG NRLVL D DWNP+ D QA AR+ RDGQKK +IYR L +GT++E
Sbjct: 757 LLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKPCYIYRLLLSGTMDE 816
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ 712
K+YQRQ+SK GL + + T + S E+LRD+FT H D H + C C
Sbjct: 817 KIYQRQISKLGLSDSLMNAE---KKTTSDTFSQEELRDIFTLHLDSTCISHRQLLCD-CD 872
Query: 713 NYD-----DGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLH--------KLKSS 759
D E G T+S + + D E + GF +A H KL+
Sbjct: 873 GKGGSATLDKPEQTSSGTWTDSQSSTNSDDDE--QLPGF--VAASQHAVDKTAQDKLERR 928
Query: 760 EKQLGTPLEEDLNNWGHH 777
+K L L W H+
Sbjct: 929 KKLLA------LYKWAHY 940
>gi|258563128|ref|XP_002582309.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907816|gb|EEP82217.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 939
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 230/574 (40%), Positives = 317/574 (55%), Gaps = 84/574 (14%)
Query: 161 PEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLG 220
P+E Q LV + +DPLL + LR HQREGV+F++ECV G+ G G +LAD+MGLG
Sbjct: 291 PKEKQ-----LVDVVIDPLLGKHLREHQREGVKFLYECVMGMRPFNG-EGAVLADEMGLG 344
Query: 221 KTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCES 278
KTLQ+IALL+TL+ Q + P+VKKA+IV P +L+ NW+ E KKW+G + + +
Sbjct: 345 KTLQTIALLWTLMKQNPIHEAPPVVKKALIVCPVTLIKNWQKEFKKWLGNDRLGVFVADG 404
Query: 279 TR---DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
D G+ S V+I+ YE R + + D++I DE HRLK Q
Sbjct: 405 KHMRLTDFTMGM--------SYNVMIIGYERLRTVQEELTKGRGIDIVIADEGHRLKTVQ 456
Query: 336 TLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
+ + NDL EFFAMV+F NPG+LG F + +E I+ R
Sbjct: 457 NKSAQAIQSLNTARRIILSGTPIQNDLSEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSR 516
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
+P A+ +E + G RS EL++ + FILRRT +L HLPPK ++ C TP Q+ +Y
Sbjct: 517 QPGASRKEIEKGKARSEELASLTSLFILRRTADILLKHLPPKTEYILFCNPTPAQANIYR 576
Query: 437 HFIHSKNVKRAI-SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
H + S + A+ + ET+ S + I++L L P + +R F
Sbjct: 577 HVLASPIFQSALGNSETENSN--STISSL--LSTLP-----------------PNLLRHF 615
Query: 496 PPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
P SGK+ VL +LL +LR T +++VLVSNYT TL+L A L
Sbjct: 616 SPAS------------------SGKIRVLDQLLHNLRSTTSEKVVLVSNYTSTLNLLAAL 657
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLF 614
P+LRLDG+T +KRQ LV+ FN S + F FLLS+KAGG GLNL G +RLVLF
Sbjct: 658 LTSLALPFLRLDGSTPANKRQYLVDDFNRSSSSSCFAFLLSAKAGGIGLNLTGASRLVLF 717
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
D DWNPA D QA AR+ RDGQK+ IYR L G +EEK++QRQ++K GL + D
Sbjct: 718 DVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKIGLADSVM----D 773
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
+F S E+LRDLF ++ + HE + C
Sbjct: 774 QKGGIAHF-SREELRDLFRLDEETECQTHELLAC 806
>gi|167385507|ref|XP_001737376.1| DNA repair and recombination protein RAD54B [Entamoeba dispar
SAW760]
gi|165899842|gb|EDR26336.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
dispar SAW760]
Length = 764
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 312/563 (55%), Gaps = 67/563 (11%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I +DP + +FLRPHQ EGV+FM+ C+ G GCILAD+MGLGKTLQ+I L++T+
Sbjct: 185 ILIDPYIGKFLRPHQIEGVKFMYHCIM----RGGECGCILADEMGLGKTLQTITLIWTVY 240
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS-GIDSFTD 292
Q +KK +IV P SL+ NWE E KKW+G V+ I + + D + ++ F
Sbjct: 241 KQC-----NIKKIVIVCPQSLIGNWEKEFKKWLG--VERIPVQTGSSDSSMKEKVNDFIR 293
Query: 293 PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------- 339
+ VLI+SYE R H ++ L++CDE HR+KN + TN
Sbjct: 294 --DYIPVLIISYEQVRSHVETLKKTK-IGLIVCDEGHRIKNLMSKTNSSLKALGAPRHII 350
Query: 340 ------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
+N LE+F++++ F +PG LG + F+R + I ++ A+ EE +LG ER+
Sbjct: 351 LSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQLGTERAK 410
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
EL+ K+N ++LRRT+ + +LP K V+ K + LQ +LY + + K+
Sbjct: 411 ELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSHLQIKLYKIMLKELDKKKL-----D 465
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-GFEDCIRFFPPEMFSGRSGSWTGGDG 512
Q L YI KLCNHP LI + E+CI+ G
Sbjct: 466 QCGALKYIQLFTKLCNHPALISKYLMEEKISLNENDENCIK----------------GVT 509
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE-------RRYPYLR 565
E S K ++ + + + ++ +++VLVSNYT+TLDLF ++ + + YLR
Sbjct: 510 INEESSNKFNITIQFIKEIIIKSKEKVVLVSNYTKTLDLFEMYFKQEEEYKQKKIFNYLR 569
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG TS +R +V ND S N + LLSSKAGG GLNLIG +RL+LFDPDWNPA DKQ
Sbjct: 570 LDGKTSQKQRDIIVEKINDKSSNFNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQ 629
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+WRDGQ+K+ IYR L TGTIEEK+YQRQ+ K + + I +E + G LS
Sbjct: 630 AMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLE----MGKSLSV 685
Query: 686 EDLRDLFTFHDDVRSEIHENMHC 708
E L +F + D S+ H+ + C
Sbjct: 686 EQLMKIFELNTDTISDTHDLLQC 708
>gi|159467693|ref|XP_001692026.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas
reinhardtii]
gi|158278753|gb|EDP04516.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas
reinhardtii]
Length = 845
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 229/562 (40%), Positives = 300/562 (53%), Gaps = 85/562 (15%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DG + P+TVDP L R LRPHQ EGV+FM+E V GL A GCILAD+MGLGKTLQ I
Sbjct: 150 DGRPVTPVTVDPYLGRLLRPHQAEGVRFMYEAVMGL-RTADKTGCILADEMGLGKTLQVI 208
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
L +TLL QG +G+P+ K ++VTP +LV NW E+KKW+G +L ALC
Sbjct: 209 TLAWTLLRQGPEGRPVAGKVLVVTPATLVDNWGREVKKWLGSE-RLQALCLQQSPTAKQQ 267
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-------DQTLT- 338
I F +++I SYET R H+ + DLL+CDE HRLK+ D L+
Sbjct: 268 ILEFRHGVHQ-KMMITSYETLRKHAKDLAGV--FDLLVCDEGHRLKSVGGNKTIDALLSL 324
Query: 339 ------------NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+NDL+EF+A+++F P LG AA F R Y I +E TAT E+K+
Sbjct: 325 GCQRRVLLTGTPVQNDLQEFYALLSFVAPEALGSAALFNRVYGIPITRSQEGTATAEDKE 384
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
LG RSSEL AKV+ FILRRT ALL+ HLPP + C+ T Q LY + SK V
Sbjct: 385 LGAARSSELKAKVSAFILRRTQALLAKHLPPLASLTLFCRPTEQQVSLYTAVLRSKAVAS 444
Query: 447 AI--SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ + LA ITAL+K C
Sbjct: 445 LLGGGGGGGEDNTLAVITALRKARTQ--------------------C------------- 471
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
KM VL+ LL + +R V+VS T LDL +L +
Sbjct: 472 ---------------KMQVLSELLRGIGA-VGERCVVVSTSTAALDLVGRLS------TV 509
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
R+DG TS+ RQ +V++FN + + VFLLS++AGG GLNL+G N LVL+D DWNPA D+
Sbjct: 510 RIDGATSVDGRQIIVDNFNKLNMGQ-VFLLSTRAGGAGLNLVGANHLVLYDSDWNPAMDQ 568
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK--VIQQEQTDSSATQGNF 682
QA AR+WRDGQ K +YR L+TGTIEEKVYQRQ+ K L ++ + G
Sbjct: 569 QAMARIWRDGQTKPCHVYRMLTTGTIEEKVYQRQLMKADLASATMVGGGAGGGGKSGGGK 628
Query: 683 LSTEDLRDLFTFHDDVRSEIHE 704
+ E+LR LF+ + S+ +
Sbjct: 629 FTREELRALFSLNTATASDTRD 650
>gi|343961655|dbj|BAK62417.1| DNA repair and recombination protein RAD54-like [Pan troglodytes]
Length = 520
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/374 (50%), Positives = 246/374 (65%), Gaps = 16/374 (4%)
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+NDL E+F++V+F N GILG A F++++E I+ GR+ A+E +++LG ER EL++ V
Sbjct: 102 QNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIV 161
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
N+ ++RRT+ +LS +LP KI +VVCC+LTPLQ+ELY F+ + E L+
Sbjct: 162 NRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLS 221
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
IT+LKKLCNHP LI+D G G D FPP S +LSG
Sbjct: 222 SITSLKKLCNHPALIHDKCVEEEDGFVGALD---LFPPGYSS---------KALEPQLSG 269
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V
Sbjct: 270 KMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVV 329
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK
Sbjct: 330 ERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 389
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
+IYR LS GTIEEK++QRQ K+ L + E+ D S +L++LF +
Sbjct: 390 YIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELKELFILDEASL 445
Query: 700 SEIHENMHCTRCQN 713
S+ H+ +HC RC N
Sbjct: 446 SDTHDRLHCRRCVN 459
>gi|183234185|ref|XP_650328.2| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
gi|169801218|gb|EAL44942.2| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 764
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 313/566 (55%), Gaps = 67/566 (11%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I +DP + +FLRPHQ EGV+FM+ C+ G GCILAD+MGLGKTLQ+I L++T+
Sbjct: 185 ILIDPYIGKFLRPHQIEGVKFMYHCIM----RGGECGCILADEMGLGKTLQTITLIWTVY 240
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS-GIDSFTD 292
Q +KK +IV P SL+ NWE E KKW+G V+ I++ + D + ++ F
Sbjct: 241 KQC-----NIKKIVIVCPQSLIGNWEKEFKKWLG--VERISVQTGSSDSSMKEKVNDFIR 293
Query: 293 PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------- 339
+ VLI+SYE R H ++ L++CDE HR+KN + TN
Sbjct: 294 --DYIPVLIISYEQVRSHVETLKKTK-IGLIVCDEGHRIKNLMSKTNSSLKALGGSRHII 350
Query: 340 ------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
+N LE+F++++ F +PG LG + F+R + I ++ A+ EE +LG ER+
Sbjct: 351 LSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQLGTERAK 410
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
EL+ K+N ++LRRT+ + +LP K V+ K + LQ +LY + K ++
Sbjct: 411 ELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLYKIML-----KELEKKKLD 465
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-GFEDCIRFFPPEMFSGRSGSWTGGDG 512
Q L YI KLCNHP LI + E CI+ G
Sbjct: 466 QCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKCIK----------------GIS 509
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA-------QLCRERRYPYLR 565
E S K ++ + + + ++ +++VLVSNYT+TLDLF + +++ + YLR
Sbjct: 510 LNEESSNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEEYKQKKIFNYLR 569
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG TS +R +V ND S N + LLSSKAGG GLNLIG +RL+LFDPDWNPA DKQ
Sbjct: 570 LDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQ 629
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+WRDGQ+K+ IYR L TGTIEEK+YQRQ+ K + + I +E + G LS
Sbjct: 630 AMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLE----MGKSLSV 685
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRC 711
E L +F + + + H+ + C C
Sbjct: 686 EQLMKIFELNTNTICDTHDLLQCDCC 711
>gi|449704175|gb|EMD44466.1| DNA repair protein, putative [Entamoeba histolytica KU27]
Length = 764
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 312/566 (55%), Gaps = 67/566 (11%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I +DP + +FLRPHQ EGV+FM+ C+ G GCILAD+MGLGKTLQ+I L++T+
Sbjct: 185 ILIDPYIGKFLRPHQIEGVKFMYHCIM----RGGECGCILADEMGLGKTLQTITLIWTVY 240
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS-GIDSFTD 292
Q +KK +IV P SL+ NWE E KKW+G V+ I + + D + ++ F
Sbjct: 241 KQC-----NIKKIVIVCPQSLIGNWEKEFKKWLG--VERIPVQTGSSDSSMKEKVNDFIR 293
Query: 293 PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------- 339
+ VLI+SYE R H ++ L++CDE HR+KN + TN
Sbjct: 294 --DYIPVLIISYEQVRSHVETLKKTK-IGLIVCDEGHRIKNLMSKTNSSLKALGGSRHII 350
Query: 340 ------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
+N LE+F++++ F +PG LG + F+R + I ++ A+ EE +LG ER+
Sbjct: 351 LSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQLGTERAK 410
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
EL+ K+N ++LRRT+ + +LP K V+ K + LQ +LY + K ++
Sbjct: 411 ELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLYKIML-----KELEKKKLD 465
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-GFEDCIRFFPPEMFSGRSGSWTGGDG 512
Q L YI KLCNHP LI + E CI+ G
Sbjct: 466 QCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKCIK----------------GIS 509
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA-------QLCRERRYPYLR 565
E S K ++ + + + ++ +++VLVSNYT+TLDLF + +++ + YLR
Sbjct: 510 LNEESSNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEEYKQKKIFNYLR 569
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG TS +R +V ND S N + LLSSKAGG GLNLIG +RL+LFDPDWNPA DKQ
Sbjct: 570 LDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQ 629
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+WRDGQ+K+ IYR L TGTIEEK+YQRQ+ K + + I +E + G LS
Sbjct: 630 AMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLE----MGKSLSV 685
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRC 711
E L +F + + + H+ + C C
Sbjct: 686 EQLMKIFELNTNTICDTHDLLQCDCC 711
>gi|407035016|gb|EKE37494.1| DNA repair protein, putative [Entamoeba nuttalli P19]
Length = 764
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 311/566 (54%), Gaps = 67/566 (11%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I +DP + +FLRPHQ EGV+FM+ C+ G GCILAD+MGLGKTLQ+I L++T+
Sbjct: 185 ILIDPYIGKFLRPHQIEGVKFMYHCIM----RGGECGCILADEMGLGKTLQTITLIWTVY 240
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS-GIDSFTD 292
Q +KK +IV P SL+ NWE E KKW+G V+ I + + D + ++ F
Sbjct: 241 KQC-----NIKKIVIVCPQSLIGNWEKEFKKWLG--VERIPVQTGSSDSSMKEKVNDFIR 293
Query: 293 PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------- 339
+ VLI+SYE R H ++ L++CDE HR+KN + TN
Sbjct: 294 --DYIPVLIISYEQVRSHVETLKKTK-IGLIVCDEGHRIKNLMSKTNSSLKALGGSRHII 350
Query: 340 ------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
+N LE+F++++ F +PG LG + F+R + I ++ A+ EE +LG ER+
Sbjct: 351 LSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQLGTERAK 410
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
EL+ K+N ++LRRT+ + +LP K V+ K + LQ +LY + K ++
Sbjct: 411 ELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLYKIML-----KELEKKKLD 465
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-GFEDCIRFFPPEMFSGRSGSWTGGDG 512
Q L YI KLCNHP LI + E CI+ G
Sbjct: 466 QCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKCIK----------------GIS 509
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE-------RRYPYLR 565
E S K ++ + + + ++ +++VLVSNYT+TLDLF ++ + + YLR
Sbjct: 510 LNEESSNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEENKQKKIFNYLR 569
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG TS +R +V ND S N + LLSSKAGG GLNLIG +RL+LFDPDWNPA DKQ
Sbjct: 570 LDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQ 629
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A AR+WRDGQ+K+ IYR L TGTIEEK+YQRQ+ K + + I +E + G LS
Sbjct: 630 AMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLE----MGKSLSV 685
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRC 711
E L +F + + + H+ + C C
Sbjct: 686 EQLMKIFELNTNTICDTHDLLQCDCC 711
>gi|255072671|ref|XP_002500010.1| SNF2 super family [Micromonas sp. RCC299]
gi|226515272|gb|ACO61268.1| SNF2 super family [Micromonas sp. RCC299]
Length = 800
Score = 365 bits (937), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 227/528 (42%), Positives = 301/528 (57%), Gaps = 45/528 (8%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG---IH-GCILADDMGLGKT 222
+G + V + VDP + R LRPHQR+GV+FM+ECV GL IH GC+LA +MG+GKT
Sbjct: 275 EGRSNVTVVVDPFIGRHLRPHQRDGVRFMYECVVGLRRGGASGSIHKGCLLAHEMGMGKT 334
Query: 223 LQSIALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRD 281
LQ IALL+TLL QG GKP+V+KA+I P SLV NW EIKKW+ L E
Sbjct: 335 LQVIALLWTLLKQGPIAGKPVVRKAVIACPASLVGNWGGEIKKWLNDTRLEPLLVEG--G 392
Query: 282 DVVSGIDSFTDPCSSLQ----VLIVSYETFRMHSSKF-SCSESCDLLICDEAHRLKND-- 334
+ G F D Q VL+ SYET R H+ + DLL+CDEAHRLKN
Sbjct: 393 EGADGKQKFEDWALPNQRRHCVLVTSYETLRSHAKTVQKATGGIDLLVCDEAHRLKNTKG 452
Query: 335 --QTLTN-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
QT+ +NDL EFFA+++F PG+LGDA+ F++ + T +
Sbjct: 453 DTQTIAALRALRCDRRVLLTGTPIQNDLGEFFAVMDFACPGLLGDASVFKKVFSTPVEAS 512
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNA-LLSNHLPPKIIEVVCCKLTPLQSEL 434
R+ AT EEK++G RS+EL +F+ R + + + HLPPK VV + +P+Q+ L
Sbjct: 513 RDKHATAEEKRIGAARSAELGRMTREFVHRASARDVNAKHLPPKTEYVVFVRPSPVQAAL 572
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRF 494
Y + +R + S+ L + L++LCN L+ G G +
Sbjct: 573 YRAVL-----RRGARD---GSQPLRALQQLQRLCNSASLLMRARGEGEEGEDVGGGSLSD 624
Query: 495 FPPEMFSGRSGSWTGGDGAWVE-LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
++ G A E +SGK+ VL R+L +R R D+ V+VS YT TLD+ A
Sbjct: 625 LSSKVPEGYPDPSDPRVPAHDEAMSGKLAVLIRMLQGMR-RGIDKTVIVSGYTSTLDIIA 683
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
+ C RLDG+ ++R LVN FN + VFLLS+KAGG GLNL+G NRLVL
Sbjct: 684 EACLVMGGKVSRLDGSVPPNQRVPLVNSFNA-GRGGDVFLLSTKAGGVGLNLVGANRLVL 742
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSK 661
FD DWNPAND QA ARVWRDGQK+ V IYR +STGT+EEK++QRQM K
Sbjct: 743 FDSDWNPANDLQALARVWRDGQKRPVTIYRLVSTGTVEEKIFQRQMLK 790
>gi|321253974|ref|XP_003192917.1| DNA repair protein [Cryptococcus gattii WM276]
gi|317459386|gb|ADV21130.1| DNA repair protein, putative [Cryptococcus gattii WM276]
Length = 993
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 221/590 (37%), Positives = 323/590 (54%), Gaps = 78/590 (13%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DP+L LR HQ+EGV+FM+ CV G+ A G GCILAD+MGLGKTLQ+IA
Sbjct: 316 GTTIVDVVIDPILGNLLREHQKEGVKFMYSCVMGMTGAEG-EGCILADEMGLGKTLQTIA 374
Query: 228 LLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
L+YT+L Q + ++ KAIIV P +LV+NW E KKWV RV ++ DV+S
Sbjct: 375 LIYTMLKQSPFANQTSIIGKAIIVCPVTLVNNWRKEFKKWVDRRVNVLVA------DVLS 428
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNRNDLEE 345
G P +NDL E
Sbjct: 429 GT-----PV---------------------------------------------QNDLGE 438
Query: 346 FFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILR 405
++AMV+F PG+LG + F ++YE I+ R P + ++ +LG ER+++L+ +F+LR
Sbjct: 439 YWAMVDFACPGVLGKYSAFAKHYEKPILKSRTPNCSTKDVELGRERANDLAKLSKEFVLR 498
Query: 406 RTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALK 465
RT A+L ++LPPK V+ + LQ + ++ + V I QS LA I ++
Sbjct: 499 RTAAVLEHYLPPKYEYVIFVAPSLLQLRVLSNLLDPSIVGSFIRGHGAQS--LALIDLMR 556
Query: 466 KLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
K+ N P L+ K + +D + S G D V SGKM +L
Sbjct: 557 KISNSPMLL----KRKDDELARADDDLGSATSAAISAIPGDTNIND---VTTSGKMLLLD 609
Query: 526 RLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP 585
++L + Q T++++V+VSN+T TLDL LC+ +RY YLRLDG+T +RQ+LV+ FN
Sbjct: 610 KMLHSIYQSTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQELVDRFNKD 669
Query: 586 SKNE--FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
+ + FVFLLS+KAGG GLNLIGG+RL+LFD DWNP+ D QA AR+ RDGQK+ V+IYR
Sbjct: 670 KERQGSFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDLQAMARIHRDGQKRPVYIYR 729
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRS--- 700
L+T I+EK+YQRQ++K GL + + T + S +LRD+FT +VR+
Sbjct: 730 LLTTNAIDEKIYQRQITKTGLSDQMMDHKHSEKQTGKDSFSAAELRDIFTL--NVRTDGC 787
Query: 701 EIHENMHCTRCQNYDDGAESIGEGDETNSA---NKNDQSDQEVTDIGGFA 747
+ H+ + C + I EG++ + N + +SD + D F
Sbjct: 788 QTHDLLGCQCTETPAGKLRDIAEGEQRSEHLPDNSSGESDSDPNDYPTFV 837
>gi|303277253|ref|XP_003057920.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460577|gb|EEH57871.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 945
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 234/569 (41%), Positives = 310/569 (54%), Gaps = 55/569 (9%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ VDP+L LRPHQR+GV+FMFECVSG A G GC+LA +MG+GKTLQ IALL+TLL
Sbjct: 277 VVVDPILGASLRPHQRDGVRFMFECVSGR-RAGGHRGCLLAHEMGMGKTLQVIALLWTLL 335
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDP 293
QG G PMVKKA+I P SLVSNW AE+KKW+G L E D S D +
Sbjct: 336 KQGPRGTPMVKKAVIACPASLVSNWGAEMKKWLGQTRLAPLLVEGGDKDAKSLFDDWALA 395
Query: 294 CSS-LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ--TLT---------NR- 340
VL+ SYET R ++SK S DLL+CDEAHRLKN + TLT NR
Sbjct: 396 HQKRYAVLVTSYETLRSYASKIE-SGGVDLLVCDEAHRLKNAKGDTLTVAALRALKCNRR 454
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
NDL E+F +++F PG+LGD F++ + I R+ A+ +E+ +G R
Sbjct: 455 VLLSGTPIQNDLTEYFGLMDFACPGLLGDLGPFKKIFSGPIERSRDKRASADERTIGAAR 514
Query: 392 SSELSAKVNQFILRRTNALLS--NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
EL+ +++ R + + ++ + LPPK VV +L+P Q+ LY + + V+ A+
Sbjct: 515 GEELARMTREYVHRASASEVNARHGLPPKTEYVVFVRLSPTQAALYGALLKTAAVRGALG 574
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC---IRFFPPEMFSGRSGS 506
+ L + L++LCN +L+ G D IR + G
Sbjct: 575 ---GKGSPLTALQKLQRLCNSARLLASGGGGGGGDVVDENDAEEDIRALRARVPRGYDDP 631
Query: 507 WTG-GDGAWVELSGKMHVLARLLGHLRQRTD--DRIVLVSNYTQTLDLFAQLCRERRYP- 562
+ D SGK+ VL L LR T D+ V+VS +T TLDL A
Sbjct: 632 FDATADALSPSFSGKLAVL---LTMLRATTPGVDKTVVVSGFTSTLDLIAAALSAAGVGG 688
Query: 563 --YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
RLDG+ + + R +VN FND K VFLLS KAGG GLNL+G NRLVLFD DWNP
Sbjct: 689 KVSSRLDGSVAPNLRGAIVNKFND-GKGGDVFLLSCKAGGVGLNLVGANRLVLFDSDWNP 747
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
AND QA ARVWR+GQK+ V IYR +STGT+EE+V+QRQ+ K + + + G
Sbjct: 748 ANDLQALARVWREGQKRPVTIYRLVSTGTVEERVFQRQILKGDVADAMGMASVNKRGGDG 807
Query: 681 NF-------------LSTEDLRDLFTFHD 696
+ LS E+LRDLF F +
Sbjct: 808 DGGGGGGGGGAGKMSLSKEELRDLFRFDE 836
>gi|50311185|ref|XP_455616.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644752|emb|CAG98324.1| KLLA0F11814p [Kluyveromyces lactis]
Length = 931
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 227/604 (37%), Positives = 322/604 (53%), Gaps = 71/604 (11%)
Query: 147 FTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
T P DP+ + P + V + VDPLL + LRPHQREGV+F+++CV +++
Sbjct: 241 ITYSPLFDPVSIKDPLIMNKTENHKVSVIVDPLLSKTLRPHQREGVKFLYDCVMNMVHTK 300
Query: 207 G-----------IHGCILADDMGLGKTLQSIALLYTLLCQ----------GFDGKPMVKK 245
G I GC+LAD+MGLGKTL +I L++TLL Q G + K
Sbjct: 301 GDESMILERDDDIKGCLLADEMGLGKTLMTITLIWTLLKQTPYPTIINQRGVTLAGEISK 360
Query: 246 AIIVTPTSLVSNWEAEIKKWV-GGRVQLIAL-CESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+IV P +L+ NW+ E KKW+ R+ ++ L ++ + + + SF + QVLIV
Sbjct: 361 VLIVCPVTLIGNWKKEFKKWLPMNRIGVLTLHSRNSPTEDKAQVRSFLKVPRTYQVLIVG 420
Query: 304 YETFRMHSSKFSCSE-SCDLLICDEAHRLKND--------QTL-----------TNRNDL 343
YE + + + DL+ICDE HRLKN Q+L +NDL
Sbjct: 421 YEKLLSIKDELQNEKRNLDLVICDEGHRLKNKDSKILKVLQSLDIEKKIVLSGTPIQNDL 480
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL--GIERSSELSAKVNQ 401
EEF+ +++F NPGILG F+R Y I R+ A + + + G+ RS +L +
Sbjct: 481 EEFYTIIDFINPGILGSFGRFKREYILPIARSRDVNAKQNQTLVEQGLLRSDQLIEITKR 540
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRTN +L +LPP+ ++ CK T Q E ++ + + S T S L I
Sbjct: 541 FILRRTNEILQQYLPPRTDLIIFCKPTAEQVEAFHKILTEGQLN--FSNMTFNSS-LGLI 597
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
T KK+CN +LI +P + E S S T G SGK+
Sbjct: 598 TLFKKICNSTRLI-----KTDP-----------YYEERLSQVQTSSTSGKFT----SGKL 637
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L LL L+ +TD+++V++SNYTQTLD+ C Y RLDG+T+ R ++V
Sbjct: 638 RILLSLLHELKTKTDEKVVVISNYTQTLDIIEGHCSSEGYTSARLDGSTATKTRDQIVTS 697
Query: 582 FN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN DPS FVFLLS+K+GG GLNLIG +RLVLFD DWNP+ D QA +R+ RDGQ++ F
Sbjct: 698 FNNDPSI--FVFLLSAKSGGVGLNLIGASRLVLFDNDWNPSIDLQAMSRIHRDGQRRPCF 755
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRS 700
IYR ++TG I+EK+ QRQ+ K L K TD S + E+L+DLFT + S
Sbjct: 756 IYRLVTTGCIDEKILQRQLMKIALSKKFLDSATDQSKNDDDLFQQEELKDLFTINLSTLS 815
Query: 701 EIHE 704
H+
Sbjct: 816 NTHD 819
>gi|430811700|emb|CCJ30833.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 767
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 246/687 (35%), Positives = 366/687 (53%), Gaps = 96/687 (13%)
Query: 123 PVLVTITNRLDLPRTVENNVIEENFTLPPGV-DP-----LVLWQPEEPQNDGGN--LVPI 174
P+L T + P N + + LP DP LV +P+ G N ++ +
Sbjct: 80 PMLNIHTKKFKTPLLTSNIMHIQTSKLPQARHDPNEPGALVFPRPKVESYQGKNVQIIDV 139
Query: 175 TVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
VDP L + LRPHQREGV+F++ECV + G G ILAD+MGLGK+LQ I LL+TLL
Sbjct: 140 VVDPSLSKHLRPHQREGVKFLYECVMKMREFEG-QGAILADEMGLGKSLQIITLLWTLLK 198
Query: 235 QG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG--RVQLIALCESTRDDVVSGIDSF 290
Q + K ++K+A+IV P +L++NW+ E +KW+GG ++ L + D S I +F
Sbjct: 199 QSPYYGIKSIIKRALIVCPVTLINNWKKEFRKWIGGNEKIGLFVV------DSNSNIKNF 252
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL--------TNRN- 341
+ + V+I+ YE R + + D++ICDE HRLK+ L T R
Sbjct: 253 S-VGNVYSVMIIGYERLRNIFDQLE-DANIDIIICDEGHRLKSTNKLAQAIKSIKTRRRI 310
Query: 342 -------------------------DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
DL EF+ MV+F NPG+L + A F++ +E II R
Sbjct: 311 ILSGTPIQNGNYYYYYYSISIKLCLDLGEFYVMVDFVNPGLLENYATFKKEFENPIIKSR 370
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
+ +++K+ G RS +L++ F+LRRT+ +L +LPP + +V CK T LQ ++Y
Sbjct: 371 QAGCMKKDKEKGRARSEQLASLTKMFVLRRTSEILDEYLPPTVEYIVFCKPTSLQVDIYR 430
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
I+ ++ + T + L +T LKK+CN P L++ K E F
Sbjct: 431 ELINI-SMSSLNAGNTNIAVHLRALTYLKKVCNSPTLLFHKKK--------IEQDFDLFH 481
Query: 497 PEM---FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
+ FS R + SGK+ V + L L+ TD+++V+VS+YTQTL +
Sbjct: 482 TNIKHKFSSRCP----------KDSGKLLVFDKFLEALKA-TDEKVVIVSHYTQTLQILE 530
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
L + YLRLDG T+ KRQ+ V+ FN S + FLLS+K+GG GLNLIG +RLVL
Sbjct: 531 NLLISKSLSYLRLDGQTANIKRQEYVDKFN--SSDSIAFLLSAKSGGYGLNLIGASRLVL 588
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
FD DWNP+ D Q AR+ RDGQ+KR F+YRFL +G I+EK+YQRQ++K+GL +
Sbjct: 589 FDIDWNPSVDLQTMARIRRDGQRKRTFVYRFLISGMIDEKIYQRQITKQGLSDTFIDSKM 648
Query: 674 DSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKN 733
S + +F + E+L+ LF F+ D + HE + C +CQ G G +
Sbjct: 649 --SLIKDSF-TQEELKSLF-FYQDTSCQTHELLSC-QCQ---------GNGLNVEKIDYE 694
Query: 734 DQSDQEVTDIGGFAGLAGCLH-KLKSS 759
+ SD E+ ++GG+ + L K+K S
Sbjct: 695 EFSDDEI-NLGGWVKSSEILESKIKMS 720
>gi|242023203|ref|XP_002432025.1| DNA repair and recombination protein RAD54B, putative [Pediculus
humanus corporis]
gi|212517383|gb|EEB19287.1| DNA repair and recombination protein RAD54B, putative [Pediculus
humanus corporis]
Length = 840
Score = 362 bits (928), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 212/546 (38%), Positives = 308/546 (56%), Gaps = 66/546 (12%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G + P+ ++ L + LR HQ EG+ F++E + G + +G ILAD+MGLGKTLQ I+
Sbjct: 236 GAKVTPVYIEESLSKKLRQHQLEGIIFLYESIMGYKDI-NYNGVILADEMGLGKTLQCIS 294
Query: 228 LLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
L++TLL QG ++ KP++K+ +IVTPTSL+ NW E KW+G RV+++ + ++
Sbjct: 295 LIWTLLKQGPYNKKPVIKRVLIVTPTSLIMNWYNEFIKWLG-RVKIVPYVVNQKNK---- 349
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
V+I+SYE + + DLL+CDEAHR+KN T +
Sbjct: 350 ----PSEIKYHSVVIISYEML-IRCVNNVMEHNVDLLVCDEAHRIKNSNIKTAQVLNQLN 404
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
NDL+E + +++F NP ILG + FR + II R+P + E+ K
Sbjct: 405 CKKKILLTGTPLQNDLQELYTLIDFANPNILGSPSQFRIQFADPIIASRQPDSNEDVVKK 464
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G ERS L +N+F+LRRT +L N+LPP+ VV CK+T Q +YN ++S +
Sbjct: 465 GNERSINLKKIINKFLLRRTRNILKNYLPPRHDIVVFCKITEPQRNMYNSLVNSFLNAKE 524
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
E + S L IT+LKK+CN+P L+ N E
Sbjct: 525 SEEFIEGSSHLELITSLKKICNYPSLL-------NKDDNYLEKID--------------- 562
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
++ SGK+ V L L+ + +++++VSN TQTL+L ++ Y RL
Sbjct: 563 -------IDTSGKLKVTVNFLKELQMTSVKEKVLIVSNATQTLNLLEKVFHVLNYSTCRL 615
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG T ++R K+V FN S++ F+FLLSSKAGG GLN+ G +RL+LFD DWNPA D QA
Sbjct: 616 DGNTPSAQRNKIVEDFN-TSRDLFIFLLSSKAGGVGLNVTGASRLILFDSDWNPATDLQA 674
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
+R+WRDGQK VFIYR L+TGTIEEK+YQRQ+SK+GL + D + + LS E
Sbjct: 675 ISRIWRDGQKFPVFIYRLLTTGTIEEKIYQRQISKQGL----CEGTVDPKSNKSIKLSKE 730
Query: 687 DLRDLF 692
+L++LF
Sbjct: 731 ELKELF 736
>gi|440295421|gb|ELP88334.1| DNA repair and recombination protein RDH54, putative [Entamoeba
invadens IP1]
Length = 766
Score = 361 bits (927), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 228/608 (37%), Positives = 331/608 (54%), Gaps = 75/608 (12%)
Query: 173 PITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTL 232
P+ +DP L + LRPHQ EG++FM+ CV GCILAD+MGLGKTLQ+IAL++TL
Sbjct: 192 PVLIDPYLGKHLRPHQVEGIKFMYNCVM----RGDDSGCILADEMGLGKTLQTIALIWTL 247
Query: 233 LCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS-GIDSFT 291
Q VKK ++V P SL+ NWE E KW+G + I + + D ++ ++ F
Sbjct: 248 YKQC-----NVKKTVVVCPQSLIGNWENEFMKWLG--TERIPVKTGSSDALMKQKVEDFI 300
Query: 292 DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------ 339
+ + VLI SYE R H ++ LLICDE HR+KN T TN
Sbjct: 301 N--DYIPVLITSYEQVRSHVETLKKTK-IGLLICDEGHRIKNLMTKTNTSLQNLGASRHI 357
Query: 340 -------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
+N LE+F+++V F PG LG F+R + T I ++ AT EE +LG ER+
Sbjct: 358 ILSGTPVQNGLEDFYSLVEFCCPGSLGPLRTFKRVFATPIQRAQDGDATLEEIELGKERA 417
Query: 393 SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET 452
EL+ K+N ++LRRT+ + +LP K VV K + +Q ++Y ++ +KR
Sbjct: 418 KELTVKLNDYVLRRTSKINEKYLPDKTEIVVFVKPSIVQKKIYAMMLNDLKMKRV----- 472
Query: 453 KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
QS L +I KLCNHP L+ D + ++D + E+ +
Sbjct: 473 DQSAALQFIQLFTKLCNHPLLVRDYL------VENYKDVDK----EIL-----DILNQEV 517
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER---RYPYLRLDGT 569
A +E S K +V + + + + +++++V+VSNYT+TLD+F + R + LRLDG
Sbjct: 518 ANLEGSNKFNVTVKFIEEIIENSEEKVVVVSNYTKTLDVFEKYFSTREESKIKILRLDGK 577
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
TS R +V ND V LLSSKAGG GLNLIG +RL+LFDPDWNPA DKQA AR
Sbjct: 578 TSQKSRDTIVEKINDKKSGYNVLLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQAMAR 637
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
+WRDGQK++ IYR L TGTIEEK+YQRQ+ K + + + +E + G LS E L
Sbjct: 638 IWRDGQKRKAMIYRMLCTGTIEEKIYQRQLQKNQVSESVVEEHLE----MGKSLSLEQLM 693
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+F +++ + H+ + C C+ G G +ANK+ + + I A +
Sbjct: 694 KVFELNENTLCDTHDLLQCD-CE---------GSG----TANKSGEKHLTMDRIESIASV 739
Query: 750 AGCLHKLK 757
G + +LK
Sbjct: 740 DGLITRLK 747
>gi|254585925|ref|XP_002498530.1| ZYRO0G12474p [Zygosaccharomyces rouxii]
gi|238941424|emb|CAR29597.1| ZYRO0G12474p [Zygosaccharomyces rouxii]
Length = 901
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 228/623 (36%), Positives = 336/623 (53%), Gaps = 83/623 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL----------------NAAGIHGCILAD 215
V + VDP+L + LRPHQR+GV+FM++CV GL N + I GCILAD
Sbjct: 224 VDVVVDPMLSKLLRPHQRDGVKFMYDCVMGLARPDDGIDTASKSLVLENDSDIQGCILAD 283
Query: 216 DMGLGKTLQSIALLYTLLCQ------------GFDGKPMVKKAIIVTPTSLVSNWEAEIK 263
+MGLGKTL +I L++TLL Q G + + KK IIV P +L++NW+ E
Sbjct: 284 EMGLGKTLMTITLIWTLLKQTPMASKVSCSQNGVPLQGLCKKIIIVCPVTLIANWKREFG 343
Query: 264 KWVG-GRVQLIALC-ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-C 320
KW+ R+ ++ L ++ + + + SF + QVLI+ YE + + ++
Sbjct: 344 KWLNLSRIGILTLSPQNNAERDIYDVKSFLRVQRTYQVLIIGYEKLLSVAQELENGKNLI 403
Query: 321 DLLICDEAHRLKNDQT-----LTN--------------RNDLEEFFAMVNFTNPGILGDA 361
DLL+CDE HRLKN + L N +NDL EFF +++F NPG+LG
Sbjct: 404 DLLVCDEGHRLKNGSSKVLNILKNLEIPRKIILSGTPIQNDLNEFFTIIDFINPGVLGSY 463
Query: 362 AYFRRYYETSIICGREPTATEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
+F++ + T I R+P + G ERS E+ + +FILRRTN++LS +LPPK+
Sbjct: 464 PFFKKRFMTPITKARDPANRFNLHVVEKGQERSEEMISITRRFILRRTNSILSKYLPPKM 523
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIK 479
++ CK T Q + + N+ + + LA IT LKK+CN P LI
Sbjct: 524 DIILFCKPTNHQISAFKDILQGANIDL---QRLNFNSSLALITLLKKICNSPTLIQTD-- 578
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR-QRTDDR 538
++ M + R + SGK+ VL +LL ++ + T D+
Sbjct: 579 -------------SYYKSSMQNSRISQKYQNEYN----SGKLRVLMKLLNQIKIETTSDK 621
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSK 597
+V++SNYTQTLD+ L RLDG+T +R +VN+FN +PS F FLLS+K
Sbjct: 622 VVVISNYTQTLDIIENLMASAGMSSCRLDGSTPAKQRDAIVNNFNHNPSI--FAFLLSAK 679
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
+GG GLNLIG RL+LFD DWNP+ D QA +R+ RDGQKK +IYR ++TG I+EK+ QR
Sbjct: 680 SGGVGLNLIGACRLILFDNDWNPSVDLQAMSRIHRDGQKKPCYIYRLVTTGCIDEKILQR 739
Query: 658 QMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD 716
Q+ K L QK + ++ + + + EDL+DLFT D S H+ + C+ C+
Sbjct: 740 QLMKNCLSQKFLSDTKSTKGSADDDLFNKEDLKDLFTVLVDTPSNTHD-LICS-CEGI-- 795
Query: 717 GAESIGEGDETNSANKNDQSDQE 739
G E + + + NKN +S +E
Sbjct: 796 GEEVTLQDHQDSQNNKNYESSRE 818
>gi|159470413|ref|XP_001693354.1| hypothetical protein CHLREDRAFT_117345 [Chlamydomonas reinhardtii]
gi|158277612|gb|EDP03380.1| predicted protein [Chlamydomonas reinhardtii]
Length = 526
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 218/538 (40%), Positives = 307/538 (57%), Gaps = 57/538 (10%)
Query: 222 TLQSIALLYTLLCQGFDGK-PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
TLQ+IA L+TLL G G+ P + +++ P SLV+NW E++ W G RV + + + TR
Sbjct: 1 TLQAIAALWTLLSDGVHGRRPTCVRPLVLCPASLVANWGKELEFWCG-RVAPVVV-DDTR 58
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN 339
D V ++ P L VL++ Y+TFR H ++ D+++CDEAH LKN D LT
Sbjct: 59 GDKVR----YSMP--YLVVLVMGYQTFRSHRDAVV-KKNIDIVLCDEAHFLKNVDSQLTK 111
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+N L+EF+ +++ PG+LG+ FRR YE I G + A+
Sbjct: 112 AVAGLPARMRLLLTGTPIQNKLQEFYTVMSTAVPGLLGELPAFRRTYELPIQRGSDADAS 171
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ E LG+ER + A ++LRR+ + +LPPK+ +VV CK++ LQ+ LYN F++S
Sbjct: 172 DAEAALGMERMDAMLALCGTYMLRRSCNTMKKYLPPKVEQVVFCKMSTLQARLYNFFLNS 231
Query: 442 KNVKRAISEETKQSKILAYIT-ALKKLCNHPKLI-----YDTIKSG---NPGTTGFEDCI 492
V + S ++ A+KK+C HP L+ D KSG P TGFE C+
Sbjct: 232 PAVHVVLLRNILTSSSFSHCALAVKKMCCHPDLVSTGSCADGCKSGADGRPVVTGFEGCL 291
Query: 493 RFF-----PPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR-TDDRIVLVSNYT 546
F P G ++ SGK+ VL +L +R + D++VLVSNYT
Sbjct: 292 PLFGEASVAPVYKPGSCQAYH---------SGKVAVLEMMLKAVRDSGSGDKVVLVSNYT 342
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
+ LD+ +CR + +LRLDG + KRQ LV+ FNDP+ F+ LLSSKAGG GLN+I
Sbjct: 343 EALDILEGMCRAHAWAFLRLDGGCDVKKRQPLVDCFNDPAHPSFLLLLSSKAGGVGLNII 402
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G NRLVLFDPDWNPAND QA ARVWR GQKK+V+IYR L+TG+IEEKVYQRQ++K+GL
Sbjct: 403 GANRLVLFDPDWNPANDLQAMARVWRQGQKKKVWIYRLLTTGSIEEKVYQRQVAKQGLSA 462
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEG 724
I D+S Q S E+LR LF + R + H + C+ + D ++ EG
Sbjct: 463 AI----VDNSNDQSRTFSAEELRALFEVNTTTRCDTHGAIKCSCDGSQDHDGDTAEEG 516
>gi|297665071|ref|XP_002810938.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Pongo abelii]
Length = 683
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 202/459 (44%), Positives = 282/459 (61%), Gaps = 43/459 (9%)
Query: 154 DPLVLWQP------EEPQNDGGNL-VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
D LVL++P ++ + D L V + VDP+L + LRPHQREGV+F++ECV+
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR-RIP 174
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G HGCI+AD+MGLGKTLQ I L++TLL Q + KP + KA++V+P+SLV NW E+ KW+
Sbjct: 175 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 234
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSL---QVLIVSYETFRMHSSKFSCSESCDLL 323
GGR+Q +A+ ++D++ ++ F + + +LI+SYETFR+H+ S L+
Sbjct: 235 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHAGVLQ-KGSVGLV 293
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
ICDE HRLKN + T + NDL E+F++V+F N GILG A F
Sbjct: 294 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 353
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++E I+ GR+ A+E +++LG ER EL++ VN+ ++RRT+ +LS +LP KI +VVC
Sbjct: 354 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 413
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LTPLQ+ELY F+ + E L+ IT+LKKLCNHP LI+D G
Sbjct: 414 CRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
G D FPP S +LSGKM VL +L R R+ D++VLVSN
Sbjct: 474 FVGALD---LFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
YTQTLDLF +LCR RRY Y+RLD SI KR K+V FN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDDPXSIKKRAKVVERFN 560
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+K+ + RF TIEEK++QRQ K+ L + E+ D S +L++LF
Sbjct: 550 KKRAKVVERF--NRTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELKELFIL 603
Query: 695 HDDVRSEIHENMHCTRCQN 713
+ S+ H+ +HC RC N
Sbjct: 604 DEASLSDTHDRLHCRRCVN 622
>gi|118383249|ref|XP_001024779.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila]
gi|89306546|gb|EAS04534.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila SB210]
Length = 1046
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 305/553 (55%), Gaps = 55/553 (9%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
L P+ +D L +R HQR GV+FMFEC+SGL I GCILAD MGLGKTLQ+IAL++
Sbjct: 301 LFPVYIDVYLNNSMRIHQRLGVKFMFECISGL-RGPDIGGCILADSMGLGKTLQTIALIW 359
Query: 231 TLLCQGFDG--KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
TL+ + P+++K ++V P SL+ +W E+KKW+G + + R+ V+
Sbjct: 360 TLIRRNPHSGTSPLIRKVVVVAPVSLLGSWNKEVKKWLGDARLIPKIALGKRETVIRICK 419
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
F SS ++L++SYE FRMH + S +CDLLI DE HRLKN T R
Sbjct: 420 EFA--SSSAKMLLISYEQFRMHVE--TLSNACDLLIFDEGHRLKNMNIKTFRSFNSIKCN 475
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
N L+EF++ V F NP I + F+ + I+ + A+ + +
Sbjct: 476 RRIILTGTPLQNSLDEFYSCVKFVNPNIFENEKQFKFVFSDPILAALKSDASADAVEKAA 535
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
RS EL+ +++F+LRR +L LPP+ + KLTP Q+ LY I ++ K S
Sbjct: 536 VRSKELTHIISRFVLRRKADILEKLLPPRSEYFIFLKLTPFQNMLYKKMIQARYNK---S 592
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
E +T ++KL NHP+LIY + GN + F+ ++FP + + W
Sbjct: 593 ELDTGEGAFGLLTIMRKLLNHPQLIYTDV--GNQTSQEFK---QYFPQDY---QLDDW-- 642
Query: 510 GDGAWVELSGKMHVLARLLGHLRQ-----RTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
E S K ++ LL +RQ ++ +RI++VS +TQTLD+ + +++ ++
Sbjct: 643 ------EASFKFKFISDLLDQMRQIEIAQKSTERIIIVSYWTQTLDVLQIMIKQKNLKFV 696
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDG+ + KRQ+L++ F DP+ + VFLL AGG GLNL NR+VL + +WNP+ND
Sbjct: 697 RLDGSVNAQKRQELIDRFQDPTNDIKVFLLCGSAGGTGLNLSAANRMVLMEANWNPSNDL 756
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
Q R+WRDGQ K V IYR ++ GT+EEKV QRQ KE L + + E+ Q N
Sbjct: 757 QVMGRIWRDGQTKPVHIYRLVACGTMEEKVLQRQFLKEDLSQNVVDEKM--IVKQYN--- 811
Query: 685 TEDLRDLFTFHDD 697
+ L+ LF F D
Sbjct: 812 NDKLKQLFEFKGD 824
>gi|388855888|emb|CCF50463.1| related to RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
hordei]
Length = 1070
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 219/588 (37%), Positives = 314/588 (53%), Gaps = 52/588 (8%)
Query: 154 DPLVLWQPEEPQ-----NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL-LNAAG 207
D +V+ +P+ G +V + +DP L + LRPHQ +GV+F++E V G+ N+
Sbjct: 295 DAIVMKRPDAAHQKKYNTKGHPIVDVVLDPQLAKALRPHQVQGVKFLYERVMGMHANSDK 354
Query: 208 IHGCILADDMGLGKTLQSIALLYTLL---CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
GCILAD MGLGKTLQ+IAL+ TL C + +A++V P +LV NW+ E +K
Sbjct: 355 GRGCILADQMGLGKTLQTIALILTLAKQNCYYTSRSATIHRALVVCPLTLVKNWKREFRK 414
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS-CSESCDLL 323
W+G + + +D ++ F SS V+++ YE R + DL+
Sbjct: 415 WIGNNA--LNVLSIDQDRGRKDVERFAR-SSSYNVMVIGYEKLRTVIEIVKHANPPVDLI 471
Query: 324 ICDEAHRLKN----------DQTLTNR----------NDLEEFFAMVNFTNPGILGDAAY 363
+CDE HRLKN D + NR N L E A+V+F + LG
Sbjct: 472 VCDEGHRLKNKEAQITTIFDDLSFCNRRIILSGTPIQNHLSELHALVSFVDDEALGTYDE 531
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
FRR +E II R P + + + G R++ L N ILRRT +L + LPPK V+
Sbjct: 532 FRRIFEEPIIRSRAPHCSRQIQATGQARAAALKRLTNDVILRRTADILVDFLPPKKEMVL 591
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY-DTIKSGN 482
C + Q +Y + S +V+ + E L I L+KLCN P+L+ D SG
Sbjct: 592 FCSPSQEQLRIYQSILASNHVRSILQGEPGNG--LLQIGVLRKLCNTPELLLKDCESSGQ 649
Query: 483 PGTTGFEDCI-RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
T + FFPP + SGK+ L LL +R +T+D++VL
Sbjct: 650 TPTKALLGHLGSFFPPNFVRNEA-----------RYSGKLICLMNLLETVRAQTEDKVVL 698
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGG 600
VS++T TLD + R++RY YLRLDG T +R +VN FN + ++ FVFLLS+K+GG
Sbjct: 699 VSSFTSTLDTVEAMVRKKRYSYLRLDGKTPQDERMAMVNQFNRQAVDKSFVFLLSAKSGG 758
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLNLIG NRLVL D DWNP+ D QA AR+ RDGQ K +IYR L +GT++EK+YQRQ+S
Sbjct: 759 VGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQNKVCYIYRLLLSGTMDEKIYQRQIS 818
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
K GL + + S++ + S ++L+D+FT H D H + C
Sbjct: 819 KLGLSDSLMDSEKKSAS---DTFSQQELKDIFTLHLDSACISHRQLVC 863
>gi|448103575|ref|XP_004200069.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
gi|359381491|emb|CCE81950.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
Length = 857
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 228/598 (38%), Positives = 333/598 (55%), Gaps = 62/598 (10%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
D LV+ +P P +V + VDP+L + LRPHQR+ V F+++CV G G +G +L
Sbjct: 207 DSLVMSKP--PDLAPNKVVDVVVDPILSKHLRPHQRDAVCFLYDCVMGFKKFGG-NGALL 263
Query: 214 ADDMGLGKTLQSIALLYTLLCQG----FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-G 268
AD+MGLGKTL +IA+++TLL Q D P+ +K +I P SL+ NW E KKW+G
Sbjct: 264 ADEMGLGKTLTTIAVIWTLLKQNPYLEVDS-PVCRKVLITCPVSLIQNWSKEFKKWLGLN 322
Query: 269 RVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
R+ ++AL ++ DD V I SF QV+I+SYE + K + DLL+CD
Sbjct: 323 RIGILALNSKQNAADDKVQ-ISSF-GKTRVYQVMIISYEKV-LTCRKELMDLNIDLLVCD 379
Query: 327 EAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HRLK+ QTL +NDL EF+ +VNF NPG+LG ++F++
Sbjct: 380 EGHRLKSATNKVMQTLNQMQIKSKILLTGTPIQNDLYEFYNIVNFINPGVLGTPSHFQKE 439
Query: 368 YETSIICGREPTATEEE-KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+ I R+ T + G E+S+EL QF+LRR++++LS+ LP K ++ C
Sbjct: 440 FVKPISRARDMNCTNKVILDFGEEKSNELLTLTRQFVLRRSSSVLSHVLPDKTDIIIFCP 499
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+ LQ ++ S+ + +T + L IT +KKLCN P L+ +
Sbjct: 500 PSNLQLLMFKAIQSSQAFNSFLQSQTSVNNSLGIITVMKKLCNSPSLLAN--------DK 551
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
F + I+ P S SGK+++L LL + Q ++IVL+SNYT
Sbjct: 552 LFNEIIKSCPEPKIDLESLHKRYS-------SGKVNLLIPLLLEICQ-LKEKIVLISNYT 603
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNL 605
QTLDLF + R+ +LRLDG+T R +VN FN+ + + VFLLS+K+GG GLNL
Sbjct: 604 QTLDLFENVLRKLNISFLRLDGSTQGKSRDSIVNEFNNSTFEKASVFLLSAKSGGFGLNL 663
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
IG +RL+LFD DWNP+ D QA AR+ RDGQKK VFIYR +TG I+EK++QRQ+ K Q
Sbjct: 664 IGASRLILFDNDWNPSVDLQAMARIHRDGQKKPVFIYRLFTTGCIDEKIFQRQLMK---Q 720
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGE 723
K+ ++ + +Q + DL+D+FT H + + H+ + C+ E IGE
Sbjct: 721 KLSEKFVDNKEGSQLDLFDINDLKDIFTIHYETKCNTHDLLQCS--------CEGIGE 770
>gi|402586718|gb|EJW80655.1| type III restriction enzyme, partial [Wuchereria bancrofti]
Length = 660
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 337/610 (55%), Gaps = 84/610 (13%)
Query: 165 QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++D G + I VD + R LRPHQ++GV FM+ C+ G + G G ILAD+MGLGKT+Q
Sbjct: 2 KDDDGFVRRIAVDVQIARHLRPHQKDGVAFMYRCLKG---SHG--GAILADEMGLGKTVQ 56
Query: 225 SIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
+I+L+ L+ + + KP+++K IIV PTSL++NW AE KW + Q + R +
Sbjct: 57 TISLITALIKKRLNQKPIIRKCIIVVPTSLLNNWYAEFMKW-SPQTQTMLF----RVLKL 111
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN----------- 333
+ ++ ++ + IVS+E ++K S S DLL+CDEAHR+KN
Sbjct: 112 TDLEKLISYRNTSMIAIVSHEMIARTAAKLSVV-SVDLLVCDEAHRIKNLNGRLREQLQI 170
Query: 334 -----DQTLTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
LT +NDLEEF+++VNF P + F + E +C EPT
Sbjct: 171 LHAQRRLLLTGTPMQNDLEEFYSLVNFARPDL------FISFSEFKNLCEMEPT------ 218
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPK---IIEVVCCKLTPLQSELYNHFIHSK 442
R +EL A+V +LRRT ++ + LPPK + +V C+ + LQ +Y K
Sbjct: 219 -----RFNELLAEV---MLRRTAEVIHDLLPPKKQVVDYIVWCRPSALQCSIY------K 264
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDT--IKSGNPGTTG---FEDCIRFFPP 497
N+K+ + + L I AL+KLCNHP L+Y + +K G F + + P
Sbjct: 265 NLKKFLPYDH-----LTLIDALRKLCNHPSLLYQSMIVKRQTCKVVGEREFYNALLQSFP 319
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
FS S S T SGK++V LLG R++ ++++V+VSN+TQTLDL +LCR
Sbjct: 320 NTFSAFSLSTTD--------SGKLNVFVELLGTFREQ-EEKVVIVSNFTQTLDLLEELCR 370
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
Y LRLDG+T KR ++V FN S + FLLS+KAGG GLNL+G NR++LFD D
Sbjct: 371 TLYYTILRLDGSTEAKKRMEIVEEFNSLSNKNYAFLLSAKAGGLGLNLVGANRMILFDSD 430
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D QA AR+WR GQ++ I+R ++ GT++EK+ QRQ+ K L V++ +S
Sbjct: 431 WNPAVDMQAMARIWRQGQERPCHIFRLVTAGTVDEKILQRQIKKSSLNTVVEMVPVESV- 489
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSD 737
S E+L+D+FT D+ E H + C +C E + + D+ S +++ SD
Sbjct: 490 ---THFSDEELQDIFTLRDEAECETHCLLEC-QCDGRGLLPEQL-QADQEISPDESSASD 544
Query: 738 QEVTDIGGFA 747
+V + ++
Sbjct: 545 SDVEHVTTYS 554
>gi|170032260|ref|XP_001844000.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167872116|gb|EDS35499.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 821
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 252/705 (35%), Positives = 359/705 (50%), Gaps = 106/705 (15%)
Query: 108 RLCARKRFVPWGSS----RPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQP-- 161
R+ AR F P S RP++V+ ++ TV I E+F PL + +P
Sbjct: 166 RVEARGGFKPPAESMCAGRPIVVSSFKQVG---TVGEEAIAEDFV------PLTMREPSF 216
Query: 162 --EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA-AGIHGCILADDMG 218
+ N G VP+ REGV F++ECV G+ + G ILAD+MG
Sbjct: 217 DHQWKYNKGK--VPVVT------------REGVSFLYECVLGMKREDSEQFGAILADEMG 262
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCES 278
LGKTLQ++AL+YTL+ QG G+P+VK+ +IVTP+SLV NW+ EI KW+ E
Sbjct: 263 LGKTLQTLALIYTLMKQGPYGQPIVKRVLIVTPSSLVDNWDREITKWLKQ--------ER 314
Query: 279 TRDDVVSGIDSFTDPCSS--LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT 336
+V + S + +LI+SYE S+ + DL++CDE HRLKN
Sbjct: 315 IYTFIVGPNNKLKKYAQSAHIPILIISYELLAKQVSELETVK-FDLIVCDEGHRLKNSSI 373
Query: 337 ----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGRE 377
LT +NDL+EF +++NF NPG+LG + F+ YE I+ ++
Sbjct: 374 KIAEVLDGIDCRRRILLTGTPIQNDLQEFHSLINFVNPGLLGTYSEFKAKYENPIVQSQQ 433
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNH 437
P + ++LG R +EL++ + FILRRT + +++LP K V+ + LQ L
Sbjct: 434 PNVLPQLQELGQTRLNELNSITSSFILRRTQEVNNSYLPEKQELVIFAHPSELQERLLTL 493
Query: 438 FIHSKNVKRAISEETKQSKI--LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
+ E++ S I L IT LKK+CNHP LI T S +P D ++
Sbjct: 494 ALKH-------YEQSGTSAITPLQLITILKKICNHPSLI-STTDSKDP------DSLQ-- 537
Query: 496 PPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
+ + SW A SGK+ +L LL L +R + ++V+VS +++TLD+ A L
Sbjct: 538 --NLLISQLPSWQHMGPA---DSGKLAILESLLEALIERRE-KVVIVSYFSKTLDMIAGL 591
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
C Y + RLDG T R KLV FN+PS + F+FLLS+KAGG GLNL+G +RLVLFD
Sbjct: 592 CEHYNYKFCRLDGATPSQDRGKLVATFNNPSSDIFIFLLSAKAGGIGLNLVGASRLVLFD 651
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTD 674
DWNPA+D QA +R+WRDGQ + VFIYR ++ +IEEK++QRQ+SK L V+ Q+Q
Sbjct: 652 NDWNPASDLQAMSRIWRDGQTRNVFIYRLITAFSIEEKIFQRQISKTSLSGSVVDQKQNL 711
Query: 675 SSATQGNFLSTEDLRDLFTF--HDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANK 732
S+ LS ++L+DLF+ DD + M C D E G
Sbjct: 712 SNLK----LSDDELKDLFSLVEEDDREDCLTHQMLSCECAGSGDVPEPAGAASSQEEVES 767
Query: 733 NDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHH 777
++S V H LK E L W HH
Sbjct: 768 PERSRYRVKL---AKTKKKQKHSLKMQE----------LLKWQHH 799
>gi|302309194|ref|NP_986455.2| AGL212Wp [Ashbya gossypii ATCC 10895]
gi|299788244|gb|AAS54279.2| AGL212Wp [Ashbya gossypii ATCC 10895]
gi|374109700|gb|AEY98605.1| FAGL212Wp [Ashbya gossypii FDAG1]
Length = 903
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 231/654 (35%), Positives = 345/654 (52%), Gaps = 94/654 (14%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA-------- 205
DPLV+ G + V + VDP+L + LR HQR G++FM++CV GL +
Sbjct: 229 DPLVM------NKAGDDEVEVVVDPILSKKLRQHQRTGIKFMYDCVRGLARSEKDDDRTV 282
Query: 206 ------AGIHGCILADDMGLGKTLQSIALLYTLLCQ------------GFDGKPMVKKAI 247
+ + GC+LAD+MGLGKT +IAL++TLL Q G + + +K +
Sbjct: 283 MILEYDSDVKGCLLADEMGLGKTCMTIALIWTLLKQHPRPSSVPCSQLGVALQGICQKVL 342
Query: 248 IVTPTSLVSNWEAEIKKWV-GGRVQLIALC-ESTRDDVVSGIDSFTDPCSSLQVLIVSYE 305
+V P +L+ NW+ E KW+ R+ ++ L ++T + + + +F + QVLI+ YE
Sbjct: 343 VVCPVTLIGNWKKEFIKWLPMNRIGILTLSSKNTPEKDKNDVRNFLRVQRTYQVLILGYE 402
Query: 306 TFRMHSSKFSCSES-CDLLICDEAHRLKNDQT-----LTN--------------RNDLEE 345
S+ ++S DLLICDE HRLKN + LT+ +NDL E
Sbjct: 403 KLLNVFSELDQAKSKLDLLICDEGHRLKNSSSKILKCLTDLEIERKVILTGTPIQNDLNE 462
Query: 346 FFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK--KLGIERSSELSAKVNQFI 403
F+ ++NF NPGILG A+F+R Y T I R+ ++ LG RS +L +FI
Sbjct: 463 FYTIINFINPGILGTFAHFKRVYITPITRARDVNNKHNDQIVSLGESRSQDLIEITKKFI 522
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRT+++++++LPP+ VV CK T Q + +N + V + + L IT
Sbjct: 523 LRRTSSIIADYLPPRTDIVVFCKPTQHQLDAFNQVLVGTRVD---FQNMSFNSSLGLITL 579
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
KK+CN P L+ + F+ + P + +S + SGK+ V
Sbjct: 580 FKKICNSPSLV--------SSDSYFQSKVNGGTPALRIAQSTT-----------SGKLKV 620
Query: 524 LARLLGHLRQRTD-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
L LL + R+D +++V++SNYTQTLD+ L YLRLDG+T +R +VN F
Sbjct: 621 LMSLLHQIAHRSDNEKVVVISNYTQTLDIIGNLMSSASLSYLRLDGSTPTKERDAIVNDF 680
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N S+ F FLLS+K+GG GLNL+G +RL+LFD DWNP+ D QA +R+ RDGQKK FIY
Sbjct: 681 NR-SQTIFGFLLSAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIY 739
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEI 702
R ++TG I+EK++QRQ+ K L K + D ++ N EDL+DLF+ S
Sbjct: 740 RLVTTGCIDEKIFQRQLMKNNLSKKFLDDHCDDKSSD-NVFEQEDLKDLFSVQSGTLSNT 798
Query: 703 HENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKL 756
H+ + C+ C+ G G+E N S + GG A + G + L
Sbjct: 799 HD-LLCS-CE---------GSGEEFEDTNTPPPSSENTE--GGKAKMTGWMRAL 839
>gi|170577655|ref|XP_001894090.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158599485|gb|EDP37070.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 805
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 319/571 (55%), Gaps = 80/571 (14%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
+E ++D G + I VD + R LRPHQ++GV FM+ C L N+ G G +LAD+MGLGK
Sbjct: 148 DETKDDDGFVRRIAVDVQIARHLRPHQKDGVAFMYRC---LKNSHG--GALLADEMGLGK 202
Query: 222 TLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV-GGRVQLIALCESTR 280
T+Q+I+L+ L+ + + KP+++K IIV PTSL++NW AE +W + L + +ST
Sbjct: 203 TVQTISLITALVKKRLNQKPIIRKCIIVVPTSLLNNWYAEFMRWSPQTQTMLFRILKSTD 262
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN------- 333
V + S+ + + IVSYE ++K S S DLL+CDEAHR+KN
Sbjct: 263 ---VKKLISYRNTS---MIAIVSYEMIARTAAKLSVV-SVDLLVCDEAHRIKNLNGRLRE 315
Query: 334 ---------DQTLTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
LT +NDLEEF+++VNF P + F + E +C E T
Sbjct: 316 QLQILHAQRRLLLTGTPMQNDLEEFYSLVNFARPDL------FISFLEFKNLCEMEST-- 367
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
R +EL ++V +LRRT ++ + LPPKI +V C+ + LQ +Y
Sbjct: 368 ---------RFNELLSEV---MLRRTAEVIHDLLPPKIDYIVWCRPSALQCSIY------ 409
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI----KSGNPGTTGFEDCIRFFPP 497
KN+K+ + + L I AL+KLCNHP L+Y ++ ++ F + P
Sbjct: 410 KNLKKFLPYDH-----LTLIDALRKLCNHPFLLYQSMVVKRQTCKVEEREFYNAFLQSFP 464
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
F+ S S T SGK++V LL R++ ++++V+VSN+TQTLDL +LCR
Sbjct: 465 NTFNAFSLSTTD--------SGKLNVFVELLATFREQ-EEKVVIVSNFTQTLDLLEELCR 515
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
Y LRLDG+T KR ++V FN S + FLLS+KAGG GLNL+G NR++LFD D
Sbjct: 516 TLYYTILRLDGSTEAKKRMEIVEEFNSLSNKNYAFLLSAKAGGLGLNLVGANRMILFDSD 575
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNPA D QA AR+WR GQ+K I+R ++ GT++EK+ QRQ+ K L +++ +S
Sbjct: 576 WNPAVDMQAMARIWRQGQEKPCHIFRLITAGTVDEKILQRQIKKSSLNTIVEMVPVESLT 635
Query: 678 TQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S E+L+D+FT DD E H + C
Sbjct: 636 ----HFSDEELQDVFTLRDDAECETHFLLEC 662
>gi|320583294|gb|EFW97509.1| helicase [Ogataea parapolymorpha DL-1]
Length = 794
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 228/593 (38%), Positives = 317/593 (53%), Gaps = 63/593 (10%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
D LVL P P D + + VDP+L LRPHQ+EGV+FM+ECV G + G HG +L
Sbjct: 159 DALVL--PRPPNADSSAVRDVVVDPVLAENLRPHQKEGVKFMYECVMGFRDYDG-HGVLL 215
Query: 214 ADDMGLGKTLQSIALLYTLLCQG--FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRV 270
AD MGLGKTLQ+IAL++TLL Q P+ +K +I P +LV NW+ E +KW+G RV
Sbjct: 216 ADSMGLGKTLQTIALVWTLLKQSPVAGDAPVARKVLICCPVTLVMNWKKEFRKWLGPNRV 275
Query: 271 QLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHR 330
++AL S+ +D I F + + V+I+ YE + C + DL++CDE HR
Sbjct: 276 SILALNGSSNNDK-QNIQGFAN-TNVYHVMIIGYEKMLTVADDVGCIK-FDLVVCDEGHR 332
Query: 331 LKNDQT----------LTNR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
LK+ + +R NDL EF+ + NF NPG+LGD F+R Y
Sbjct: 333 LKSGSNKVLKVLESLDIKHRVLLSGTPIQNDLTEFYNVANFVNPGVLGDFKSFQRSYMRP 392
Query: 372 IICGREPTATEEEK-KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
I+ RE T + G S EL +F LRRT ++ LP + V+ T L
Sbjct: 393 ILRAREANCTNAAVLEQGEAASRELIELTKKFTLRRTIEEITKFLPRRSDYVLFAPPTKL 452
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q L+ + + +S L IT +K+CN P L+ ED
Sbjct: 453 QIRLFESLQKTAQFSKILSAAPANDS-LQLITTFRKICNSPALLT-------------ED 498
Query: 491 CIRFFPPEMFSGRSG--SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
MF+G G G G+ V S K+ +L +LL + + +++V+VSN+TQT
Sbjct: 499 A-------MFAGLCGVDDLRGELGSKVR-SAKIILLVKLLKGIYKLKQEKVVVVSNFTQT 550
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN-EFVFLLSSKAGGCGLNLIG 607
LD+ +L P+ RLDG T + R K+V+ FN S + FVFLLS+K+GG GLNL+G
Sbjct: 551 LDVLEKLMNVLELPFTRLDGATPANLRDKIVSDFNKASWDMSFVFLLSAKSGGMGLNLVG 610
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
+RL+LFD DWNPA D QA ARV RDGQ + V +YR L+ G I+EK++QRQ+ K L
Sbjct: 611 ASRLILFDNDWNPAVDLQAMARVHRDGQTRPVHVYRLLTAGCIDEKIFQRQLIKTSLSDK 670
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTR-CQNYDDGAE 719
+ TDS+ NF T DL+DLF+ S+++ N H CQ DG E
Sbjct: 671 FLDDSTDSNE---NFFDTTDLKDLFSV-----SQVNSNTHMLLDCQCPGDGRE 715
>gi|366996797|ref|XP_003678161.1| hypothetical protein NCAS_0I01510 [Naumovozyma castellii CBS 4309]
gi|342304032|emb|CCC71819.1| hypothetical protein NCAS_0I01510 [Naumovozyma castellii CBS 4309]
Length = 926
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 225/597 (37%), Positives = 318/597 (53%), Gaps = 93/597 (15%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNA------------------AGIHGCIL 213
V + VDPLL + LRPHQREGV+FM++CV GL + I GC+L
Sbjct: 247 VDVIVDPLLGKLLRPHQREGVKFMYDCVMGLATNHQETDEDNTGKSLILEKDSDIGGCLL 306
Query: 214 ADDMGLGKTLQSIALLYTLLCQ------------GFDGKPMVKKAIIVTPTSLVSNWEAE 261
AD+MGLGKTL +I L++TLL Q G + +K ++V P +L+ NW+ E
Sbjct: 307 ADEMGLGKTLMTITLIWTLLKQSPSLKNIACSQSGVPLHGLCRKILVVCPVTLIGNWKRE 366
Query: 262 IKKWVG-GRVQLIALCESTRDDV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES 319
KW+ R+ ++ L ++ + + +F + QVL++ YE S + S
Sbjct: 367 FAKWLNLNRIGILTLSSRNTPEMDKTAVKNFLRVQRTFQVLVIGYEKLLSVSEELHGSRD 426
Query: 320 -CDLLICDEAHRLKNDQT-----LTN--------------RNDLEEFFAMVNFTNPGILG 359
DLLICDE HRLKN + L N +NDL EF+ +++F NPGILG
Sbjct: 427 LIDLLICDEGHRLKNGSSKVLNVLKNLEIKRKILLSGTPIQNDLNEFYTIIDFLNPGILG 486
Query: 360 DAAYFRRYYETSIICGR--EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
YF++ + I GR E E+ +LG RS E+ +F LRRTNA+LS +LPP
Sbjct: 487 SYPYFKKRFIAPITRGRDTENRHNEDIIELGEGRSKEMIDITRKFTLRRTNAILSKYLPP 546
Query: 418 KIIEVVCCKLTPLQSEL--YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY 475
K ++ CK P QS+L +N + + A + L IT KK+CN P LI
Sbjct: 547 KTDIILFCK--PTQSQLLAFNDILSRSRIDFA---NLSFNSSLGLITLFKKICNSPTLIG 601
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
D + ++ IR P + R SGK+ +L LL ++ T
Sbjct: 602 D--------DSYYQSKIR--PDGVIQERYDRSLN--------SGKLKILMTLLEKIKGNT 643
Query: 536 -DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFL 593
++++V+VSNYTQTLD+ L + RLDG+T +R +VN FN +PS F FL
Sbjct: 644 NNEKVVIVSNYTQTLDIIQNLMNSAQMVSCRLDGSTPAKQRDSIVNTFNRNPSI--FAFL 701
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
LS+K+GG GLNLIG +RL+LFD DWNP+ D QA +R+ RDGQKK +IYR ++TG I+EK
Sbjct: 702 LSAKSGGVGLNLIGASRLILFDNDWNPSIDLQAMSRIHRDGQKKHCYIYRLITTGCIDEK 761
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQG------NFLSTEDLRDLFTFHDDVRSEIHE 704
+ QRQ+ K L K + DSS T G + + EDL+DLFT + +S H+
Sbjct: 762 ILQRQLMKHSLSK----KFLDSSYTTGKTGSNDDLFTKEDLKDLFTIMETTKSNTHD 814
>gi|292630874|sp|C7GQI8.1|RDH54_YEAS2 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|256271911|gb|EEU06936.1| Rdh54p [Saccharomyces cerevisiae JAY291]
Length = 924
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 227/629 (36%), Positives = 330/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 215 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 271
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 272 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 331
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 332 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 391
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F + QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 392 DMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 451
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT- 379
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 452 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 511
Query: 380 -ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
EE K G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 512 RYNEELLKKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 571
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 572 LQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 620
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 621 DSYSRSLN-----------SGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 669
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 670 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGASRLILFDND 727
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 728 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 787
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 788 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 816
>gi|365762059|gb|EHN03672.1| Rdh54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 920
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 224/622 (36%), Positives = 326/622 (52%), Gaps = 86/622 (13%)
Query: 153 VDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLL--------- 203
V+PLV+ + V + VDPL+ +FLRPHQREGV+FM++C+ GL
Sbjct: 237 VNPLVM------NKNAAAEVDVIVDPLVGKFLRPHQREGVKFMYDCLMGLARPSFEDQNS 290
Query: 204 --------NAAGIHGCILADDMGLGKTLQSIALLYTLLCQ------------GFDGKPMV 243
N + I GC+LADDMGLGKTL SI L++TL+ Q G +
Sbjct: 291 DAKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIRQDPFASKVPCSQSGIPLSGLC 350
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDV-VSGIDSFTDPCSSLQVLI 301
KK ++V P +L+ NW+ E KW+ R+ ++ L D+ + +F + QVLI
Sbjct: 351 KKTLVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLI 410
Query: 302 VSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT----------------LTN---RN 341
+ YE S + ++ DLL+CDE HRLKN + LT +N
Sbjct: 411 IGYEKLLSVSEELEKNKHLIDLLVCDEGHRLKNGASKILNTLKSLDVKKKLLLTGTPIQN 470
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL--GIERSSELSAKV 399
DL EFF +++F NPG+LG+ A F+R + I R+ + L G E+S E+
Sbjct: 471 DLNEFFTIIDFINPGVLGNFASFKRRFIIPITRARDTANRYNDDVLEKGEEKSKEMIEIT 530
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
+FILRRTN++L +LPPK ++ CK Q + + R S L
Sbjct: 531 KRFILRRTNSILEKYLPPKTDIILFCKPYDEQILAFKDILQGA---RLDFRRLTFSSSLG 587
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
IT LKK+CN P LI G+ + + + + + G + SG
Sbjct: 588 LITLLKKVCNSPGLI---------GSDSYYNSLI----------KDTQSQGSYSRSLNSG 628
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
K+ VL LL +R+RT++++V+VSNYTQTLD+ L + RLDG+ +R +V
Sbjct: 629 KLKVLMTLLEGIRKRTEEKVVIVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIV 688
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN S F FLLS+K+GG GLNLIG +RL+LFD DWNP+ D QA +R+ RDGQK
Sbjct: 689 TSFNR-SPAIFGFLLSAKSGGVGLNLIGASRLILFDNDWNPSVDLQAMSRIHRDGQKNPC 747
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQT-DSSATQGNFLSTEDLRDLFTFHDD 697
FIYR ++TG I+EK+ QRQ+ K L QK + +T + ++ + + EDL+DLF+ H +
Sbjct: 748 FIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSETKNKGSSNDDLFNKEDLKDLFSVHTN 807
Query: 698 VRSEIHENMHCTRCQNYDDGAE 719
+S H+ + C+ C D E
Sbjct: 808 TKSNTHD-LICS-CDGLGDEIE 827
>gi|292630870|sp|A6ZL17.1|RDH54_YEAS7 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|151946464|gb|EDN64686.1| rad54-like protein [Saccharomyces cerevisiae YJM789]
Length = 924
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 330/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 215 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 271
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 272 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 331
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 332 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 391
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F + QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 392 DMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 451
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 452 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 511
Query: 381 TEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
E+ L G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 512 RYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 571
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 572 LQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 620
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 621 DSYSRSLN-----------SGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 669
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 670 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGASRLILFDND 727
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 728 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 787
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 788 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 816
>gi|398364627|ref|NP_009629.6| DNA-dependent ATPase RDH54 [Saccharomyces cerevisiae S288c]
gi|341942271|sp|P38086.4|RDH54_YEAST RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|329136720|tpg|DAA07193.2| TPA: DNA-dependent ATPase RDH54 [Saccharomyces cerevisiae S288c]
Length = 958
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 330/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 249 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 305
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 306 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 365
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 366 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 425
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F + QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 426 DMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 485
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 486 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 545
Query: 381 TEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
E+ L G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 546 RYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 605
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 606 LQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 654
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 655 DSYSRSLN-----------SGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 703
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 704 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGASRLILFDND 761
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 762 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 821
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 822 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 850
>gi|290878090|emb|CBK39149.1| Rdh54p [Saccharomyces cerevisiae EC1118]
Length = 924
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 330/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 215 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 271
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 272 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 331
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 332 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 391
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F + QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 392 DMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 451
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 452 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 511
Query: 381 TEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
E+ L G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 512 RYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 571
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 572 LQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 620
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 621 DSYSRSLN-----------SGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 669
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 670 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGASRLILFDND 727
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 728 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 787
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 788 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 816
>gi|349576451|dbj|GAA21622.1| K7_Rdh54p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300911|gb|EIW12000.1| Rdh54p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 924
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 330/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 215 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 271
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 272 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 331
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 332 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 391
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F + QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 392 DMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 451
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 452 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 511
Query: 381 TEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
E+ L G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 512 RYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 571
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 572 LQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 620
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 621 DSYSRSLN-----------SGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 669
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 670 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGASRLILFDND 727
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 728 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 787
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 788 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 816
>gi|292630869|sp|B3LN76.1|RDH54_YEAS1 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|190408764|gb|EDV12029.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 924
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 329/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 215 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 271
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 272 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 331
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 332 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 391
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F + QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 392 DMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 451
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 452 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 511
Query: 381 TEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
E+ L G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 512 RYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 571
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 572 LQGARLDFG---RLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 620
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 621 DSYSRSLN-----------SGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 669
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 670 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGASRLILFDND 727
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 728 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 787
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 788 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 816
>gi|365767123|gb|EHN08611.1| Rdh54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 924
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 315/591 (53%), Gaps = 82/591 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLL-------------------NAAGIHGCI 212
V + VDPLL +FLRPHQREGV+FM++C+ GL N + I GC+
Sbjct: 250 VDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCL 309
Query: 213 LADDMGLGKTLQSIALLYTLLCQ------------GFDGKPMVKKAIIVTPTSLVSNWEA 260
LADDMGLGKTL SI L++TL+ Q G + KK ++V P +L+ NW+
Sbjct: 310 LADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKR 369
Query: 261 EIKKWVG-GRVQLIALCESTRDDV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE 318
E KW+ R+ ++ L D+ + +F + QVLI+ YE S + ++
Sbjct: 370 EFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNK 429
Query: 319 S-CDLLICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGIL 358
D+L+CDE HRLKN + LT +NDL EFF +++F NPGIL
Sbjct: 430 HLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGIL 489
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLP 416
G A F+R + I R+ E+ L G ERS E+ +FILRRTNA+L +LP
Sbjct: 490 GSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLP 549
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
PK ++ CK Q + + + + S L IT LKK+CN P L+
Sbjct: 550 PKTDIILFCKPYSQQILAFKDILQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-- 604
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
+P ++ I+ + RS + SGK+ VL LL +R+ T
Sbjct: 605 ---GSDPY---YKSHIKDTQSQDSYSRSLN-----------SGKLKVLMTLLEGIRKGTK 647
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLS 595
+++V+VSNYTQTLD+ L + RLDG+ +R +V FN +P+ F FLLS
Sbjct: 648 EKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLS 705
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
+K+GG GLNL+G +RL+LFD DWNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+
Sbjct: 706 AKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKIL 765
Query: 656 QRQMSKEGL-QKVI-QQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
QRQ+ K L QK + E + ++ + + EDL+DLF+ H D +S H+
Sbjct: 766 QRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHD 816
>gi|433837|emb|CAA53930.1| unnamed protein product [Saccharomyces cerevisiae]
gi|536326|emb|CAA85017.1| RDH54 [Saccharomyces cerevisiae]
Length = 958
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 330/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 249 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 305
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 306 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 365
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 366 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 425
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F + QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 426 DMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 485
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 486 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 545
Query: 381 TEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
E+ L G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 546 RYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 605
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 606 LQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 654
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 655 DSYSRSLN-----------SGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 703
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 704 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGRSRLILFDND 761
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 762 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 821
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 822 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 850
>gi|365982629|ref|XP_003668148.1| hypothetical protein NDAI_0A07510 [Naumovozyma dairenensis CBS 421]
gi|343766914|emb|CCD22905.1| hypothetical protein NDAI_0A07510 [Naumovozyma dairenensis CBS 421]
Length = 866
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 215/595 (36%), Positives = 324/595 (54%), Gaps = 82/595 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG-------------------IHGCI 212
V + VDPL+ +FLR HQREGV+F+++C++GL I+GC+
Sbjct: 245 VDVIVDPLISKFLRKHQREGVKFIYDCINGLSQVEASTAVVDPTQQSMILEKNSDINGCL 304
Query: 213 LADDMGLGKTLQSIALLYTLLCQ------------GFDGKPMVKKAIIVTPTSLVSNWEA 260
LAD+MGLGKTL +IA+++TL Q G + KK +I+ P +L+ NW+
Sbjct: 305 LADEMGLGKTLMTIAVIWTLYKQTPLVKNIPCSQSGVPLSGLCKKFLIICPVTLIGNWKR 364
Query: 261 EIKKWVG-GRVQLIALCESTRDDV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE 318
E KKW+ R+ ++ L + ++ + + +F + QVLI+ YE S++ + +
Sbjct: 365 EFKKWLNLNRIGILTLNSNNTPEMDRNAVKNFLKVQRTYQVLIMGYEKVLSVSAELTNQK 424
Query: 319 S-CDLLICDEAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGIL 358
+ D+L+CDE HRLK+ Q L N +NDL EF+ +++F NPGIL
Sbjct: 425 NLIDMLVCDEGHRLKSGTSKVLQVLKNLDVKRKILLSGTPIQNDLNEFYTIIDFINPGIL 484
Query: 359 GDAAYFRRYYETSIICGREPT--ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
G YF++ Y I R+ + EE +LG ERS E+ QF LRRTN++L+ +LP
Sbjct: 485 GSFPYFKKRYMVPITRARDTSNRYNEEILELGEERSREMIEITKQFTLRRTNSILTEYLP 544
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
P+ ++ CK T Q + +++ I + K + + S L IT LKK+CN P LI +
Sbjct: 545 PRTDIILFCKPTETQLQAFDNAI--RGAKLDFNTASFNS-TLGLITLLKKICNSPSLIKN 601
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT- 535
+F ++ S V SGK+ VL LL HLR
Sbjct: 602 D---------------SYFTSKI----DHSQYQRANFNVLNSGKLMVLMSLLKHLRTNCP 642
Query: 536 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLL 594
+++IV+VSNYTQTLD+ L + + RLDG+T +R +V FN +PS F FLL
Sbjct: 643 EEKIVIVSNYTQTLDIIENLLLSEQMIFCRLDGSTLPKQRDSIVMSFNRNPS--TFAFLL 700
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
S+K+GG GLNL+G +RLVLFD DWNP+ D QA +R+ RDGQK+ +IYR ++TG I+EK+
Sbjct: 701 SAKSGGVGLNLVGASRLVLFDNDWNPSIDLQAMSRIHRDGQKRPCYIYRLITTGCIDEKI 760
Query: 655 YQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
QRQ+ K L + +++ + +DLRDLF+ + +S H+ + CT
Sbjct: 761 LQRQLMKHNLSQKFLDSSIENTNVNDDLFDKQDLRDLFSINHHTKSNTHD-LICT 814
>gi|292630891|sp|B5VE38.1|RDH54_YEAS6 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|207347718|gb|EDZ73802.1| YBR073Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 924
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 329/629 (52%), Gaps = 85/629 (13%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
+P+T +N+ ++ + P D + P + V + VDPLL +FLRPHQREGV+
Sbjct: 215 VPKTSQNSKAKKYY---PVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVK 271
Query: 194 FMFECVSGLL-------------------NAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
FM++C+ GL N + I GC+LADDMGLGKTL SI L++TL+
Sbjct: 272 FMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIR 331
Query: 235 Q------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRD 281
Q G + KK ++V P +L+ NW+ E KW+ R+ ++ L
Sbjct: 332 QTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSP 391
Query: 282 DV-VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CDLLICDEAHRLKNDQT--- 336
D+ + +F QVLI+ YE S + ++ D+L+CDE HRLKN +
Sbjct: 392 DMDKMAVRNFLKVQRIYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKIL 451
Query: 337 -------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
LT +NDL EFF +++F NPGILG A F+R + I R+
Sbjct: 452 NTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTAN 511
Query: 381 TEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
E+ L G ERS E+ +FILRRTNA+L +LPPK ++ CK Q +
Sbjct: 512 RYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDI 571
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ + + S L IT LKK+CN P L+ +P ++ I+ +
Sbjct: 572 LQGARLDFG---QLTFSSSLGLITLLKKVCNSPGLV-----GSDPY---YKSHIKDTQSQ 620
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
RS + SGK+ VL LL +R+ T +++V+VSNYTQTLD+ L
Sbjct: 621 DSYSRSLN-----------SGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNM 669
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ RLDG+ +R +V FN +P+ F FLLS+K+GG GLNL+G +RL+LFD D
Sbjct: 670 AGMSHCRLDGSIPAKQRDSIVTSFNRNPAI--FGFLLSAKSGGVGLNLVGASRLILFDND 727
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVI-QQEQTDS 675
WNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QRQ+ K L QK + E +
Sbjct: 728 WNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNK 787
Query: 676 SATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ + + EDL+DLF+ H D +S H+
Sbjct: 788 ESSNDDLFNKEDLKDLFSVHTDTKSNTHD 816
>gi|367013258|ref|XP_003681129.1| hypothetical protein TDEL_0D03340 [Torulaspora delbrueckii]
gi|359748789|emb|CCE91918.1| hypothetical protein TDEL_0D03340 [Torulaspora delbrueckii]
Length = 912
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/591 (36%), Positives = 316/591 (53%), Gaps = 94/591 (15%)
Query: 178 PLLVRFLRPHQREGVQFMFECVSGLLNAAG-------------------IHGCILADDMG 218
PL+ + LRPHQREGV+FM++CVSGL G I GC+LAD+MG
Sbjct: 249 PLVGKNLRPHQREGVKFMYDCVSGLAKPTGKPPTIDQTTTSLILERDSDISGCLLADEMG 308
Query: 219 LGKTLQSIALLYTLLCQ------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
LGKTL +IAL++TLL Q G + + K +IV P +L++NW+ E KW+
Sbjct: 309 LGKTLMTIALIWTLLKQTPMASQVPCSQSGVPLQGLCSKVLIVCPVTLIANWKREFGKWL 368
Query: 267 G-GRVQLIALCES-TRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKF-SCSESCDLL 323
R+ ++ L S T + + +F + QVLI+ YE S++ S ++ DLL
Sbjct: 369 NLSRIGVLTLSPSNTAEKDKYDVRNFLKVQRTYQVLIIGYEKLLTVSNELKSGKDALDLL 428
Query: 324 ICDEAHRLKNDQT-LTN------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
+CDE HRLKN + + N +NDL EF+ +V+F NPGILG ++F
Sbjct: 429 VCDEGHRLKNGASKILNILKSLDIGKKVLLSGTPIQNDLNEFYTVVDFINPGILGSFSHF 488
Query: 365 RRYYETSIICGREPTATEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
++ + I+ R+P E + G ERS E+ +F LRRTN++L+ LPP+ +
Sbjct: 489 KKRFMNPILRARDPANRYNELAVEKGEERSKEMIEITQRFTLRRTNSILAEFLPPRTDMI 548
Query: 423 VCCKLTPLQSELYNHFIHSKNVK-RAISEETKQSKILAYITALKKLCNHPKLI-----YD 476
+ CK T Q + + + + ++ + L+ IT LKK+CN P LI Y
Sbjct: 549 LFCKPTEAQVSAFKDILQGAQIDLKGLNANSS----LSLITLLKKVCNSPSLISSDSFYH 604
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
+ + + ++ + SGK+ VL LL +R TD
Sbjct: 605 STLENSKISAKYQRALN------------------------SGKLKVLMALLERIRNGTD 640
Query: 537 -DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLL 594
+++V+VSNYTQTLD+ L R RLDG+T +R +V FN DP+ F FLL
Sbjct: 641 GEKVVVVSNYTQTLDIIENLMRSADMKTCRLDGSTQSKRRDSIVTSFNRDPTM--FAFLL 698
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
S+K+GG GLNLIG +RL+LFD DWNP+ D QA +R+ RDGQK+ +IYR ++ G I+EK+
Sbjct: 699 SAKSGGVGLNLIGASRLILFDNDWNPSVDLQAMSRIHRDGQKRPCYIYRLITAGCIDEKI 758
Query: 655 YQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
QRQ++K L QK + + ++ + + EDL++LFT DV S H+
Sbjct: 759 LQRQLAKHSLSQKFLCDNKAENGHADDDLFNKEDLKNLFTVMTDVSSNTHD 809
>gi|448099761|ref|XP_004199216.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
gi|359380638|emb|CCE82879.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
Length = 857
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/565 (38%), Positives = 313/565 (55%), Gaps = 64/565 (11%)
Query: 178 PLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG- 236
P+L + LRPHQ + V F+++C+ G N G +G +LAD+MGLGKTL +IA+++TLL Q
Sbjct: 229 PILSKHLRPHQSDAVCFLYDCIMGFKNFGG-NGTLLADEMGLGKTLTTIAVIWTLLKQNP 287
Query: 237 ---FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALC--ESTRDDVVSGIDSF 290
D P+ KK +I P SL+ NW E KKW+G R+ ++AL ++ DD V I SF
Sbjct: 288 YLEVDS-PVCKKVLITCPVSLIQNWSKEFKKWLGLNRIGILALNSKQNAADDKVQ-ISSF 345
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND-----QTLTN------ 339
QV+I+SYE + K + DLL+CDE HRLK QTL
Sbjct: 346 -GKTRVYQVMIISYEKV-LTCRKELMDLNIDLLVCDEGHRLKTATNKVMQTLNQMQIKMK 403
Query: 340 --------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE-KKLGIE 390
+NDL EF+ +VNF NPG+LG ++F++ + I R+ T + G E
Sbjct: 404 ILLTGTPIQNDLYEFYNIVNFINPGVLGTPSHFQKEFVKPISRARDMNCTNKVILDFGEE 463
Query: 391 RSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
+S+EL QF+LRR++++LS+ LP K ++ C + LQ ++ S+ +
Sbjct: 464 KSNELLTLTRQFVLRRSSSVLSHVLPDKTDIIIFCPPSSLQLFMFKAISSSQAFNSFLQS 523
Query: 451 ETKQSKILAYITALKKLCNHP------KLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ + L IT +KKLCN P KL + IKS E + +
Sbjct: 524 QASVNNSLGIITVMKKLCNSPSLLANDKLFKEIIKSCQESKIDLESLHKRYS-------- 575
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
SGK+++L LL + + ++IVL+SNYTQTLDLF + R+ +L
Sbjct: 576 -------------SGKVNLLIPLLLEICE-LKEKIVLISNYTQTLDLFENILRKLNISFL 621
Query: 565 RLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
RLDG+T R +VN FN+ + + VFLLS+K+GG GLNLIG +RL+LFD DWNP+ D
Sbjct: 622 RLDGSTLGKSRDNIVNEFNNSTFEKASVFLLSAKSGGFGLNLIGASRLILFDNDWNPSVD 681
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA AR+ RDGQKK VFIYR +TG I+EK++QRQ+ K QK+ ++ + +Q +
Sbjct: 682 LQAMARIHRDGQKKPVFIYRLFTTGCIDEKIFQRQLMK---QKLSEKFVDNKEGSQLDLF 738
Query: 684 STEDLRDLFTFHDDVRSEIHENMHC 708
DL+D+FT H + H+ + C
Sbjct: 739 DINDLKDIFTIHYGTKCNTHDLLQC 763
>gi|119612120|gb|EAW91714.1| hCG2009220, isoform CRA_d [Homo sapiens]
Length = 499
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 186/420 (44%), Positives = 256/420 (60%), Gaps = 48/420 (11%)
Query: 321 DLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDA 361
DLLICDE HRLKN T +NDL+EFFA+++F NPGILG
Sbjct: 15 DLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSL 74
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
+ +R+ YE II REP+A+EEEK+LG R++EL+ FILRRT +++ +LPPKI
Sbjct: 75 SSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIEN 134
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
VV C+ LQ ELY ++S+ V+ + + S L I ALKKLCNHP L++++IK
Sbjct: 135 VVFCRPGALQIELYRKLLNSQVVRFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEK 194
Query: 482 NPGTTG--------FEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLG 529
+T ++ + FP P +F+ + SGK+ VL++LL
Sbjct: 195 ECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKE-------------SGKLQVLSKLLA 241
Query: 530 HLRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
+ + R +++VLVSNYTQTL++ ++C+ Y Y RLDG T IS+RQ++V+ FN +
Sbjct: 242 VIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSS 301
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR L+TG
Sbjct: 302 FFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTG 361
Query: 649 TIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
TIEEK+YQRQ+SK+GL + S Q S E+L++LFT H+ H+ + C
Sbjct: 362 TIEEKIYQRQISKQGLCGAVVDLTKTSEHIQ---FSVEELKNLFTLHESSDCVTHDLLDC 418
>gi|302679614|ref|XP_003029489.1| hypothetical protein SCHCODRAFT_111676 [Schizophyllum commune H4-8]
gi|300103179|gb|EFI94586.1| hypothetical protein SCHCODRAFT_111676, partial [Schizophyllum
commune H4-8]
Length = 1059
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 311/582 (53%), Gaps = 78/582 (13%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ------SIALLYTLL 233
L R LRPHQ EGV+F++ECV GL G GCILAD+MGLGKTLQ S+ L T+L
Sbjct: 355 LGRRLRPHQVEGVKFLYECVMGLRKHEG-QGCILADEMGLGKTLQVGCMRISLLLHLTVL 413
Query: 234 CQGFDGKPMV----KKAIIVTPTS---------------LVSNWEAEIKKWVGGRVQLIA 274
C+ D P + K+++ S NW++E KW+G +
Sbjct: 414 CE--DDHPRMDAAETKSVLRAHASGTEGLDRMPSIPGEQHTKNWKSEFHKWLGRDRVGVT 471
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLK- 332
+C D+ G+ +F VLI+ YE R +K + C L+ICDE HRLK
Sbjct: 472 VC----DNSNKGLQTFLHGGKHQHVLIIGYERLRTVVNKITTCIPPVGLIICDEGHRLKS 527
Query: 333 -NDQTLTN-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
N++T T +NDL EF AM +F NPG+L D FRR YE I+
Sbjct: 528 ANNKTTTMFKALKTPRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYQTFRRVYEIPIVK 587
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL 434
R P AT +E ++G R ++L N F+LRR LL N+LPPK +V K T LQ +
Sbjct: 588 SRTPEATPKELEIGEGRLAQLLTISNSFVLRRDAGLLGNYLPPKHEHIVFVKPTQLQISM 647
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI---YDTIKSGNP---GTTGF 488
Y +H V ++ Q+ LA + LKK+ N P L+ +D K + +
Sbjct: 648 YQKILHPDKVDDFVN--GSQADTLALLNTLKKVSNSPILVKAAHDKDKESSRTSIAKSAV 705
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
D + P+ R T LSGK+ ++++LL ++ + TD+++V VS+YT +
Sbjct: 706 ADAVTVLQPD---ARVDDMT--------LSGKLILVSKLLKYIYEHTDEKVVFVSHYTSS 754
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIG 607
L++ + C +RY Y RLDG T +KRQ+ VN FN + ++ F+FLLS G G+NL G
Sbjct: 755 LNILSAYCDRKRYKYNRLDGNTPPAKRQEYVNQFNKSTQRSNFIFLLS----GVGINLTG 810
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
+RL+LFD DWNP+ D Q+AAR RDGQK+ V +YRF++ G I+EK+YQRQ++K GL
Sbjct: 811 ASRLILFDCDWNPSYDLQSAARCHRDGQKRPVHVYRFMTAGLIDEKIYQRQVTKLGLSSS 870
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
+ ++ + + +DLRD+F + D H+ + C+
Sbjct: 871 LMGSESSKDKSD--SFTRKDLRDIFRVYADTGCNTHDLLDCS 910
>gi|339256750|ref|XP_003370251.1| 7 transmembrane receptor [Trichinella spiralis]
gi|316965584|gb|EFV50276.1| 7 transmembrane receptor [Trichinella spiralis]
Length = 2083
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 332/632 (52%), Gaps = 88/632 (13%)
Query: 134 LPRTVENNVI-----EENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQ 188
L R NVI E F LP P DG + VD L + LRPHQ
Sbjct: 1427 LKRRRRRNVIGSTEEEACFVLPSFTLP-----------DGRQCGEVPVDISLAKNLRPHQ 1475
Query: 189 REGVQFMFECVSGLLNAAGIHGCIL-----------------------ADDMGLGKTLQS 225
REG+ F+++C+ G ++ HG IL AD+MGLGK+LQ
Sbjct: 1476 REGILFLYKCIIGY-HSTNRHGAILGKKKLFYFSHLIQRVAFFFQTSVADEMGLGKSLQC 1534
Query: 226 IALLYTLLCQG-FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
IAL+ TL+ +G FDG+ ++++ +++ P SL+ NW+ E KW+ I L +D V
Sbjct: 1535 IALVSTLMKRGPFDGRALLRRILLLAPCSLLDNWKKEFDKWLKLHRLSIVLVRDGKD--V 1592
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFS----CSESCDLLICDEAHRLKNDQTLTN- 339
+ S + S V IVSYETF H+++ S D+LICDEAHRLKN +
Sbjct: 1593 NRACSM-NHASLRSVTIVSYETFARHANRLQESGQSSSRFDMLICDEAHRLKNPMVRASY 1651
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+N+L+E + + + NPG+LG+AA FR +E I+ A
Sbjct: 1652 LIRQFPVERRLLLTGTPVQNNLQELYVLCDLANPGLLGEAAQFRASFEKPILASMSAQAD 1711
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E+++ G + EL V+ F+LRRT ++ +LP K+ V CK + LQS+L+ +
Sbjct: 1712 EDDQIYGRWKGDELRQLVSTFLLRRTRQIMRRYLPSKVEYAVFCKPSTLQSKLFETV--A 1769
Query: 442 KNVKRAISEETKQSK--ILAYITALKKLCNHPKLIYDTIKS--GNPGTTGFEDCIRFFPP 497
+ + A+ + T L ++ ++K+C HP ++Y++++ G P T C P
Sbjct: 1770 EEARLALDQGTAAGSEFCLTFLDYMRKICAHPAVLYNSLQQAVGRPNVTVLLSCY----P 1825
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR-QRTDDRIVLVSNYTQTLDLFAQLC 556
F+ G V SGK+ VLA+LL +R Q +++V+ SN+T++L++ C
Sbjct: 1826 ACFTDV--------GVRVGDSGKLTVLAQLLELVRRQYPAEKVVVASNFTESLNIIESYC 1877
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
+ RLDG+T +S RQ++V+ FN + + F+FLLS+KAGG GLNL NRLVL+D
Sbjct: 1878 NGMGFSSFRLDGSTDVSSRQRMVDRFNTTTDDTFLFLLSTKAGGMGLNLTAANRLVLYDC 1937
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA D+QA AR+WRDGQ++ IYR L+TG+IEE ++QRQ+ K+ + V+ + D
Sbjct: 1938 DWNPAYDRQAMARIWRDGQRRVCHIYRLLTTGSIEENIFQRQIRKDDIGLVV--DGNDEM 1995
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S ++L+ L + + H+ M C
Sbjct: 1996 KKTKMKFSIDELKHLLVYQANTACATHDAMQC 2027
>gi|50294037|ref|XP_449430.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528744|emb|CAG62406.1| unnamed protein product [Candida glabrata]
Length = 920
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 229/612 (37%), Positives = 325/612 (53%), Gaps = 86/612 (14%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL---LNA-------------AGIHGCI 212
G+ V I VDPLL + LR HQR GV+FM++C+ GL L A + I GCI
Sbjct: 252 GSEVDIIVDPLLCKMLRNHQRIGVKFMYDCLLGLETNLTAESTDDKSCRLERDSDIKGCI 311
Query: 213 LADDMGLGKTLQSIALLYTLLCQ------------GFDGKPMVKKAIIVTPTSLVSNWEA 260
LADDMGLGKTL +I L++TLL Q G M+ K +IV P +L+ NW+
Sbjct: 312 LADDMGLGKTLMTITLIWTLLKQTPFASKVQCSQLGVPLSGMISKVVIVCPVTLIGNWKR 371
Query: 261 EIKKWVG-GRVQLIALCESTRDDVVS-GIDSFTDPCSSLQVLIVSYE-TFRMHSSKFSCS 317
E KKW+G R+ ++ L D+ + +F + QVLI+ YE +
Sbjct: 372 EFKKWLGLNRIGILTLNPKNNVDMDKISVRNFIKVNRTYQVLILGYEKVLTVQEELLKQK 431
Query: 318 ESCDLLICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGIL 358
+ DLLICDE HRLKN + LT +NDL EFF +++F NPG+L
Sbjct: 432 DKLDLLICDEGHRLKNGASKILKVLKSLDIDKKVILTGTPIQNDLNEFFTIIDFVNPGVL 491
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLP 416
G A F++ Y I R+ K + G E+S++L +FILRR+N +LS LP
Sbjct: 492 GTYASFKKLYINPISRARDINNKFNTKVIEQGEEKSNQLIEFTKRFILRRSNNILSKFLP 551
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI-Y 475
PK ++ C+ T Q + + I NV+ ++ T + L I +KK+CN P L+
Sbjct: 552 PKTDIILFCRPTIEQIKAFRDIIE--NVRVDMNNITFNTS-LGLINLMKKVCNSPSLLCN 608
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
D N + F S +S S SGK+ VL LL ++ +
Sbjct: 609 DPYYQSNVDSNIFT----------VSNKSNS-----------SGKLTVLLELLLEIKATS 647
Query: 536 D-DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLL 594
+++V+VSNYTQ+LD+ L + RLDG T +R LVN FN+ + N F FLL
Sbjct: 648 PMEKVVIVSNYTQSLDIIQGLMNSNQLSNCRLDGATPAKQRDMLVNTFNN-NPNIFGFLL 706
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
S+KAGG GLNLIG +RLVLFD DWNPA D QA +R+ R+GQK+ +IYR ++TG I+EK+
Sbjct: 707 SAKAGGVGLNLIGASRLVLFDNDWNPAVDLQAMSRIHREGQKRPCYIYRLITTGCIDEKI 766
Query: 655 YQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC-- 711
QRQ+ K L +K + +D+ + + DL+DLFT H + +S H+ + C RC
Sbjct: 767 LQRQLMKHNLTRKFLSSNTSDTGSANDDLFDKSDLKDLFTIHQNTKSNTHD-LIC-RCDG 824
Query: 712 --QNYDDGAESI 721
+ +DD E +
Sbjct: 825 LGEEFDDDEEVL 836
>gi|344250512|gb|EGW06616.1| DNA repair and recombination protein RAD54B [Cricetulus griseus]
Length = 498
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 251/419 (59%), Gaps = 47/419 (11%)
Query: 321 DLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDA 361
DLLICDE HRLKN T +NDL+EFFA+V+F NPGILG
Sbjct: 15 DLLICDEGHRLKNSSIKTTAALFSLPCEKRVILTGTPVQNDLQEFFALVDFVNPGILGSL 74
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
+R+ YE II REP++++EEK+LG R+ ELS +FILRRT +++ +LPPKI
Sbjct: 75 PSYRKIYEEPIIMSREPSSSKEEKELGERRAVELSCLTGRFILRRTQEVINKYLPPKIEN 134
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
VV C+ LQ+ELY + S++V+ + + S L I ALKKLCNHP L++ ++KS
Sbjct: 135 VVFCQPVALQTELYRKLLSSQSVRFCLQGLLENSTHLICIGALKKLCNHPCLLFSSVKSK 194
Query: 482 -------NPGTTGFEDCIRFFP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGH 530
N + + +P P FS SGK+ VL +LL
Sbjct: 195 EFSSSDENEEMNLCKGLLTLYPTGYDPLQFSENE-------------SGKLQVLVKLLAA 241
Query: 531 LRQ-RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE 589
+ + R +++VLVSNY QTL++ +C+ Y RLDG T +S+RQ++V++FN +
Sbjct: 242 IHELRPTEKVVLVSNYRQTLNILEGICKRHGYACARLDGQTPVSQRQQIVDNFNSKYSTD 301
Query: 590 FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGT 649
F+FLLSSKAGG GLNLIGG+ L+L+D DWNPA D QA +RVWRDGQK V IYR L+TGT
Sbjct: 302 FIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGT 361
Query: 650 IEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
IEEK+YQRQ+SK+GL + S Q S E+L+DLFT H++ + H+ + C
Sbjct: 362 IEEKIYQRQISKQGLSGAVVDLTKSSEHIQ---FSVEELKDLFTLHENSQCVTHDLLDC 417
>gi|355715095|gb|AES05224.1| RAD54-like protein [Mustela putorius furo]
Length = 390
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/437 (43%), Positives = 247/437 (56%), Gaps = 60/437 (13%)
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
++E I+ GR+ A+E +++LG +R + + ++ ++RRT+ +LS +LP KI +VVCC+
Sbjct: 1 HFELPILKGRDAAASEADRRLGEQRLAGVPRLGDRCLIRRTSDILSKYLPVKIEQVVCCR 60
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
LTPLQ+ELY F+ + E L+ IT LKKLCNHP LIYD
Sbjct: 61 LTPLQTELYKRFLRQAKPAEELREGKMTMSSLSSITLLKKLCNHPALIYDKCVEEE---D 117
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
GFE + FPP S +LSGKM VL +L R R+ D++VLVSNYT
Sbjct: 118 GFEGALEIFPPGYSS---------KALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYT 168
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
QTLDLF +LCR RRY Y+RLDGT SI KR K+V FN+PS +FVF+LSSKAGGCGLNLI
Sbjct: 169 QTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLI 228
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LS GTIEEK++QRQ K+ L
Sbjct: 229 GANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSS 288
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDE 726
+ E+ D S +L++LFT + S+ HE + C RC N
Sbjct: 289 CVVDEEQDVE----RHFSLGELKELFTLDEASLSDTHERLRCRRCVNN------------ 332
Query: 727 TNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDA 786
H+++ G+ DL W H+ + D
Sbjct: 333 ---------------------------HQVRPPPD--GSDCTSDLAQWNHNTDKRGLKDE 363
Query: 787 ILQA---SAGDEVTFVF 800
+LQA +A +TFVF
Sbjct: 364 VLQAAWDAASTAITFVF 380
>gi|409044603|gb|EKM54084.1| hypothetical protein PHACADRAFT_29344 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1116
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 303/575 (52%), Gaps = 63/575 (10%)
Query: 171 LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
+VP+ +DP++ R LRPHQ EGV+FM+ECV + G GCILAD+MG+GKTLQ+I L++
Sbjct: 400 VVPVVIDPIIARKLRPHQIEGVKFMYECVMAMQGHDG-RGCILADEMGMGKTLQTITLVW 458
Query: 231 TLLCQG-FDG-KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID 288
TLL Q + G P+V K +IV P +L+ NW+ E KW+G R +L T D S I
Sbjct: 459 TLLKQNPYAGLGPIVGKVMIVCPVTLIKNWKNEFHKWLG-RDRLGIF---TGDKDKSTIK 514
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTN-------- 339
F + VLI+ YE R S+ C L+ICDE HRLK+ T+
Sbjct: 515 QFVN-SRIHHVLIIGYERLRTVISELQYCIPPIGLIICDEGHRLKSASNKTSTMFEVLTT 573
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+NDL EF AM +F NP +LG+ F++ YE I+ R P + +E++LG
Sbjct: 574 PRRIILSGTPIQNDLGEFHAMADFCNPDLLGNYNNFKKLYEVPILKSRAPGCSTKERELG 633
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIE----VVCCKLTPLQSELYNHFIHSKNV 444
R +L F+LRR ++L N+LPPK + VV T LQ +++ + + +
Sbjct: 634 EARLEQLLETAKSFVLRRDASILKNYLPPKRLHVDEYVVFITPTQLQRDIFRQILTADKL 693
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLI---YDTIKSGNPGTTG-------FEDCIRF 494
+ T +S LA I L K+ N P L+ D + G F + R
Sbjct: 694 DNLVRNSTAES--LALIGMLTKVSNSPILLKAAADKAREQGRDAEGELIKKNVFMEAARL 751
Query: 495 FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
P V LSGK+ LA LL L + TD++ ++VS+YT TL++
Sbjct: 752 LPERAQVDD-----------VSLSGKLIALANLLRALYKGTDEKCIVVSHYTSTLNIIEA 800
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDP-SKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
C++++Y YLRLDG+T+ KRQ VN FN + F+FLLSSKAGG GLNLIG +RL L
Sbjct: 801 FCKKKQYTYLRLDGSTAAQKRQDYVNEFNKSLQRQRFIFLLSSKAGGVGLNLIGASRLCL 860
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
D DWNP+ + DG + V + + I EK+YQRQ++K GL +
Sbjct: 861 IDSDWNPSQ-----WLGYTDGTSRAVLRWHGANVLAIAEKIYQRQVTKLGLSDSFLGK-- 913
Query: 674 DSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
S ++ + + +DLRD+FT H + H+ + C
Sbjct: 914 GGSESKSDSFTRKDLRDIFTIHPNTACHTHDLLEC 948
>gi|150865881|ref|XP_001385272.2| helicase [Scheffersomyces stipitis CBS 6054]
gi|149387137|gb|ABN67243.2| helicase [Scheffersomyces stipitis CBS 6054]
Length = 809
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 225/656 (34%), Positives = 348/656 (53%), Gaps = 66/656 (10%)
Query: 116 VPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPIT 175
+P S+P + R +P+ E + P D + P P + LV +
Sbjct: 110 IPSKPSKP----MAYRKMIPKNYEVTTSNRHTRAPLYNDSRAIALPRPPGVNENELVDVL 165
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
+DP L LRPHQ EGV+F++EC+ G G GC+LAD+MGLGKTL +I +++TL Q
Sbjct: 166 IDPHLSVKLRPHQVEGVKFVYECLMGFRGNNG-KGCLLADEMGLGKTLMTITVIWTLCRQ 224
Query: 236 G-FDGKP--MVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFT 291
F +P + K +I P SL++NW+ E KKW+G ++ ++ L + + + SF
Sbjct: 225 NPFIKQPRSTIHKVLICCPVSLINNWKDEFKKWLGMNKLSILTLGGNVSSNDRQDLVSFG 284
Query: 292 DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT-----LTN------- 339
+ + QVLI++YE + + S DLL+CDE HRLK+ LT+
Sbjct: 285 N-LNVYQVLIMNYEKVTTYHQELS-KIRFDLLVCDEGHRLKSSSNKVMNHLTSFNIPRKI 342
Query: 340 -------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE-EKKLGIER 391
+NDL E++ ++NF NPGILGD F++ + I R+ T + K+ G+E
Sbjct: 343 LLTGTPIQNDLVEYYTIINFINPGILGDFKSFQKSFINPITRSRDVTCFDPVVKEQGLEI 402
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
S++L QF LRRT +LL N+L K ++ T LQ L+++ I+ K+ +++
Sbjct: 403 SNKLIDITKQFTLRRTQSLLLNYLTEKTDVILYAPPTDLQKRLFSYIINLKSFNELMNDS 462
Query: 452 -TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ ++ I KKLCN P L+ ED FF + +
Sbjct: 463 ASTTTQAFTLINLFKKLCNSPSLL-------------LED--NFFSKLIKGEKEEIELLN 507
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
SGK+++L LL + +++IVLVSNYT+TLDL + ++ +LRLDG+T
Sbjct: 508 KNTLTTSSGKINILIPLLLEITS-FNEKIVLVSNYTKTLDLLEAVLKKLDLSFLRLDGST 566
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
+ + R KLVN FN + N VFLLSSK+GG GLNL+G +RL+LFD DWNP+ D Q+ +R+
Sbjct: 567 AKNLRNKLVNQFNKSNIN--VFLLSSKSGGMGLNLVGASRLILFDNDWNPSVDLQSMSRI 624
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
RDGQ + FIYR L+TGTI+EK++QRQ+ K L ++ S++ ++ DL++
Sbjct: 625 HRDGQTRPCFIYRILTTGTIDEKIFQRQLMKSKLSSKFLDNESQSTSDVFDY---RDLKN 681
Query: 691 LFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGF 746
LF ++ S H+ + C E G+G + + + +SD +D GF
Sbjct: 682 LFEIEENTISNTHDLLEC----------ECTGDGHNISVSLTDSESD---SDAEGF 724
>gi|440799275|gb|ELR20330.1| DNA repair and recombination protein RAD54, putative [Acanthamoeba
castellanii str. Neff]
Length = 509
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 192/466 (41%), Positives = 265/466 (56%), Gaps = 52/466 (11%)
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
NDLEEF++M+ F NPGILG+ FR+ +E I+ GR+P ATE+EK +G RS LS+ +
Sbjct: 53 NDLEEFYSMIEFVNPGILGEREKFRKVFEEPIMAGRQPGATEKEKAIGDARSKMLSSLTS 112
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY 460
FILRRT +L +LPPK+ V C+L PLQ +Y + K +K A+ E ++ L+
Sbjct: 113 IFILRRTADILRKYLPPKVEYTVFCRLAPLQKAIYRAIVREK-MKVAL-ETGRRDDALSS 170
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
IT LKKLCNHP L+Y + NP + + FP + + S +LSGK
Sbjct: 171 ITMLKKLCNHPSLVYSMCQK-NPEAN--KATLEAFPAKFQALESNP---------QLSGK 218
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
+L LL +R+RT DRIV+ A LCR R + Y +LDG T + +RQ LV+
Sbjct: 219 FLLLDSLLKEIRKRTKDRIVI-----------AHLCRFRSWGYFQLDGGTPVKQRQNLVD 267
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN+P EF+FLLSSKAGG GLNLIG NRL+LFDPDWNPAND QA ARV RDGQKK+VF
Sbjct: 268 QFNNPFATEFIFLLSSKAGGVGLNLIGANRLILFDPDWNPANDLQAMARVHRDGQKKKVF 327
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRS 700
+YRFL+TGTIEEK+YQRQ++K+GL + +T++ + +DLRDLF + +
Sbjct: 328 VYRFLATGTIEEKIYQRQITKQGLSSSVVDAKTETKTQ----FTLDDLRDLFKYRSNTLC 383
Query: 701 EIHENMHCTRC---QNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLK 757
E H+ + C C +DG E G D+ ++ F+G
Sbjct: 384 ETHDLLDCKCCITKVEKEDGEEDDGFIDDDDADQIEPGYIVRRVKKKDFSG--------- 434
Query: 758 SSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQ 803
E+L W H+ V D +L+ + + +TF+F +
Sbjct: 435 -----------EELEGWDHYPSVEYVQDEMLKRAVQETITFIFAKE 469
>gi|389741791|gb|EIM82979.1| hypothetical protein STEHIDRAFT_133763 [Stereum hirsutum FP-91666
SS1]
Length = 1102
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 220/599 (36%), Positives = 314/599 (52%), Gaps = 84/599 (14%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--F 237
L R LRPHQ EGV+FM+E V GL G +GCILAD+M + L T L Q
Sbjct: 364 LARRLRPHQVEGVKFMYESVMGLRKHEG-NGCILADEMFTIR----WPLTSTPLEQNPYI 418
Query: 238 DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL 297
D P+V K +IV P +L++NW+ E KW+G I + + + + I+S
Sbjct: 419 DRGPVVGKVLIVCPVTLINNWKNEFHKWLGRDRVGIFVGDKDKSAIKQFINSKIH----- 473
Query: 298 QVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTNR---------------- 340
VLIV YE R+ S ++ L+I DE HRLK+ T++
Sbjct: 474 HVLIVGYE--RLRSVMYAPILPPIGLIIADEGHRLKSADNKTSKMFEALKTPRRVILSGT 531
Query: 341 ---NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
N L E+FAM +F NPG+L D FRR YET I+ R P T++E++LG RS++L A
Sbjct: 532 PVQNSLREYFAMADFCNPGLLDDYNTFRRVYETPILRSRTPGCTKKEQELGEARSAQLQA 591
Query: 398 KVNQFILRRTNALLSNHLPPK----IIE----------------VVCCKLTPLQSELYNH 437
F+LRR +L N+LPPK I E +V T LQ +++
Sbjct: 592 ISRSFVLRREAGILKNYLPPKRKYCIYERRQPRLRHSAILLDEYIVFVTPTLLQLSIFSK 651
Query: 438 FIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS--------GNPG-TTGF 488
++ + I T +S LA I L K+ N P L+ GN T+
Sbjct: 652 ILNPDKLDNIIQSSTAES--LALINMLTKISNSPILLKAVADKAKAKAKGEGNIAKTSAV 709
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
E+ ++ P G V LSG +L QRTD++ ++VS+YT T
Sbjct: 710 EEAVKLLP-----------NGAQVHDVSLSGNFD--NTMLNDPPQRTDEKCIVVSHYTST 756
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVFLLSSKAGGCGLNLIG 607
L++ + C+++ Y +LRLDG T KRQ+LVN FN S+ F+FLLSSKAGG GLNLIG
Sbjct: 757 LNILEEFCKKKSYTFLRLDGQTPAGKRQELVNTFNKSSQERCFMFLLSSKAGGVGLNLIG 816
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
+RL L D DWNP++D Q+ AR+ RDGQ++ VFIYRF++ GTI+EK++QRQ +K GL +
Sbjct: 817 ASRLCLIDSDWNPSHDLQSMARIHRDGQRREVFIYRFMTAGTIDEKIFQRQTTKLGLSTL 876
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT--RCQNYDDGAESIGEG 724
I +++S + + + ++LRD+FT H HE + C + N D S+ +G
Sbjct: 877 IGNTKSES---KSDSFTPKELRDIFTIHPHTSCHTHELLDCPCDQSDNIDPFERSMSDG 932
>gi|344228983|gb|EGV60869.1| hypothetical protein CANTEDRAFT_137339 [Candida tenuis ATCC 10573]
Length = 878
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 226/692 (32%), Positives = 356/692 (51%), Gaps = 95/692 (13%)
Query: 154 DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
D V+ + +E D + +DP+L + LRPHQ+EGV FM+ V G + G +G +L
Sbjct: 186 DSFVMKKGKETDTD------VIIDPILSKVLRPHQKEGVSFMYNGVMGY--SFGANGVLL 237
Query: 214 ADDMGLGKTLQSIALLYTLLCQGF--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQ 271
ADDMGLGKTL SI L++TL+ Q + K K +I+ P +L++NW E KKW+
Sbjct: 238 ADDMGLGKTLMSITLIWTLIKQSPNPEKKNEANKVLIMCPVTLINNWRREFKKWLNINQI 297
Query: 272 LIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC-----DLLICD 326
I + ++ + + +F+ S+ QV+I+SYE +C E DLL+CD
Sbjct: 298 GILVVDNNSTNYKQDLRNFSK-SSAYQVMIMSYERL------LNCEEEMLDIKFDLLVCD 350
Query: 327 EAHRLKND-----QTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
E H+LKN+ + LTN +N+L EF+ ++NF NPG G F++
Sbjct: 351 EGHKLKNNTNKSLKILTNMDVSKKVLLSGTPIQNNLTEFYTLINFINPGAFGTFTSFQKK 410
Query: 368 YETSIICGREPTATEEEK-KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+ I RE +E K+G S ELS+ F+LRRTN +L +L K ++ K
Sbjct: 411 FIKPIEMSREVNCYNKEVIKMGKTASKELSSITKTFVLRRTNDILFKYLSSKTDVLLFVK 470
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+ Q EL++ + + + + + +L I KK+CN P L+ D
Sbjct: 471 PSHQQLELFDLIMSNCSF-----ADYDNNNVLNLINVFKKICNSPSLLQDD--------- 516
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS---GKMHVLARLLGHLRQRTDDRIVLVS 543
+F+ SG G ELS GK+ +L +L + +++V+VS
Sbjct: 517 -----------NLFNSLSG------GYKTELSTSSGKIDLLIMMLIEIINEKKEKLVIVS 559
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF-VFLLSSKAGGCG 602
NYT+TLDL ++ ++ + +LRLDG+T+ S R ++N FN+ S + +FLLSSK+GG G
Sbjct: 560 NYTKTLDLLEKVLKKLNFEFLRLDGSTNPSTRTSIINQFNNVSFPRYPIFLLSSKSGGFG 619
Query: 603 LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKE 662
+NLIG +RL+LFD DWNP+ND QA +R++RDGQ K VFIYRF +TG ++EK++QRQ+ K
Sbjct: 620 INLIGASRLILFDNDWNPSNDLQAMSRIYRDGQLKPVFIYRFFTTGCLDEKIFQRQLMKN 679
Query: 663 GLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIG 722
L + + S N DL+DLFT H+ H+ + C C D +
Sbjct: 680 NL----SDKFLNDSKANSNVFDMNDLKDLFTVHEYTNCNTHDLLECD-CGGQGDTQQLEP 734
Query: 723 EGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEK-QLGT----PLEEDLNNWGHH 777
E + ++ +++ Q+ G + L S+ Q G+ + L+++ HH
Sbjct: 735 EVSDILTSEADNEDAQQSAVRSSSLSDGGWVSALNYSQMDQAGSRKKQSFKNALSDYKHH 794
Query: 778 ---FYSMSVPDAILQ-----ASAGDEVTFVFT 801
+ + PD I+Q + +++VFT
Sbjct: 795 DPKINAFNCPDDIVQTIIKKTKSNTAISYVFT 826
>gi|260941370|ref|XP_002614851.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720]
gi|238851274|gb|EEQ40738.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720]
Length = 885
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 230/630 (36%), Positives = 330/630 (52%), Gaps = 88/630 (13%)
Query: 156 LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILAD 215
LVL P+ P N ++VDPLL + L+PHQR+GV F++ C+ G+ + G +LAD
Sbjct: 270 LVLPAPKIP-----NANDVSVDPLLTKHLKPHQRDGVSFVYSCLLGI-HQPNYFGALLAD 323
Query: 216 DMGLGKTLQSIALLYTLLCQG-FDG-KPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQL 272
+MGLGKTL +I +++TLL Q F G K + K +I P SL+ NW E KW+G R+ +
Sbjct: 324 EMGLGKTLMTITVIWTLLKQSPFPGQKKVASKVLICCPVSLIDNWRREFTKWLGTYRIGV 383
Query: 273 IALCEST------RDDVVS-GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE-----SC 320
+ L +DD+V+ G ++ QVLI+SYE SCS+ +
Sbjct: 384 LCLNNKQVSPAKDKDDIVNFGKNNV------YQVLIMSYE------KTLSCSKELDALNL 431
Query: 321 DLLICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGILGDA 361
D+L+CDE HRLK+ LT +NDL EF+ ++NF NPGILG
Sbjct: 432 DILVCDEGHRLKSGSNRVFKVLSALSVEKRLLLTGTPIQNDLNEFYTIINFINPGILGTQ 491
Query: 362 AYFRRYYETSIICGREPTATEEEK-KLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
+ F++ Y I+ R+ + + + G ++S+EL FILRRT ++SN L K
Sbjct: 492 SEFQKNYLRPILRARDVNCHDLKIIREGKDKSAELIQLTKSFILRRTKDIISNCLTRKTD 551
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
++ C T +Q L+ S + ETK +L+ I +K+CN P L+++
Sbjct: 552 VIIFCAPTKVQKSLFEAVSKSSKFNSVMRSETKD--VLSMILMFRKICNSPSLLHN---- 605
Query: 481 GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
+P F E+ S S T G K++VL LL R +++V
Sbjct: 606 -DPLFASF-----LHDTELSSSPLSSRTTG--------SKVNVLVPLLLEFRT-VGEKVV 650
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
LVSNY QTLD + + Y RLDG+T R KLV FN ++ +FLLS+KAGG
Sbjct: 651 LVSNYAQTLDFLETVLSKLNLQYCRLDGSTPAKVRDKLVLDFNKCPTHK-IFLLSAKAGG 709
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLNL+G +RL+LFD DWNP+ D QA ARV R GQ K VFIYR +TG I+EK++QRQ+
Sbjct: 710 VGLNLVGASRLILFDNDWNPSVDLQAMARVHRYGQTKPVFIYRLFTTGAIDEKIFQRQLM 769
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
K L + E++ S++ N EDL+DLFT D H+ + C E
Sbjct: 770 KNNLSDMFLDEKSSSAS---NIFDFEDLKDLFTIA-DTNCNTHDLIEC--------DCEG 817
Query: 721 IGEG-DETNSANKNDQSDQEVTDIGGFAGL 749
GE D T + K+ Q D+E+ G + L
Sbjct: 818 TGEDIDLTQAEPKDTQEDEELPSSGWMSAL 847
>gi|58265682|ref|XP_569997.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21]
gi|57226229|gb|AAW42690.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 993
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 213/582 (36%), Positives = 321/582 (55%), Gaps = 82/582 (14%)
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
G +V + +DP+L LR HQ+EGV+FM+ CV G+ A G GCILAD+MGLGKTLQ+IA
Sbjct: 316 GTTIVDVVLDPVLGNLLRDHQKEGVKFMYSCVMGMTGAEG-EGCILADEMGLGKTLQTIA 374
Query: 228 LLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
L+YT M+K++ TS++ + I +C T D
Sbjct: 375 LIYT----------MLKQSPFANQTSIIG--------------KAIIVCPVTLVD----- 405
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNRNDLEEFF 347
+R K+ ++L+ D +NDL E++
Sbjct: 406 ------------------NWRKEFKKW-VDRRVNVLVADVL------SGTPVQNDLGEYW 440
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
AMVNF PG+LG + F ++YE I+ R P + ++ +LG ER+++L+ +F+LRRT
Sbjct: 441 AMVNFACPGVLGKYSAFAKHYEKPILKSRTPNCSAKDVELGRERANDLAKLSKEFVLRRT 500
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
A+L N+LPPK V+ + LQ + ++ + V I QS LA I ++K+
Sbjct: 501 AAVLENYLPPKYEYVIFIAPSLLQLSVLSNLLDPNIVGSFIRGYGAQS--LALIDLMRKI 558
Query: 468 CNHPKLIY----DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
N P L+ + ++ + + I P + + V SGKM +
Sbjct: 559 SNSPMLLKRRDDELARANDDLGSATSAAISAIP-----------SDANINDVTTSGKMLM 607
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L ++L + Q T++++V+VSN+T TLDL LC+ +RY YLRLDG+T +RQ+LV+ FN
Sbjct: 608 LDKMLHSIYQCTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQELVDRFN 667
Query: 584 -DPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
D + E FVFLLS+KAGG GLNLIGG+RL+LFD DWNP+ D QA AR+ RDGQK+ V+I
Sbjct: 668 KDKGRQESFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDLQAMARIHRDGQKRPVYI 727
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRS 700
YRFL+T I+EK+YQRQ++K GL +++ Q +T+ ++ +F S +LRD+FT +VR+
Sbjct: 728 YRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRTEKQTSKDSF-SAAELRDIFTL--NVRT 784
Query: 701 ---EIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQE 739
+ H+ + C + I EG E NS + D + +E
Sbjct: 785 DGCQTHDLLGCQCTRKPVGETRDIAEG-EHNSKDLPDNASEE 825
>gi|296413962|ref|XP_002836675.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630508|emb|CAZ80866.1| unnamed protein product [Tuber melanosporum]
Length = 870
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 307/598 (51%), Gaps = 98/598 (16%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVD-PLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
P LV+ +P E G +V V P + LRPHQREGV F++E V GL G
Sbjct: 222 PKAEGALVMPRPNEKSVPAGKVVVDVVVDPFISHSLRPHQREGVMFLYEAVMGLKPFDG- 280
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQG-----FDGKPMVKKAIIVTPTSLVSNWEAEIK 263
G ILAD+MGLGKTLQ++ + +L + G P+VK+A+IV P +L++NW E +
Sbjct: 281 RGAILADEMGLGKTLQTMLVPLWMLIDVEQNPIYGGGPVVKRALIVCPVTLINNWNKEFR 340
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
KW+G + + +S + I FT S V+++ YE + + S ++ D++
Sbjct: 341 KWLGKERIGVLVADSK-----TNIRDFTH-GKSYSVMVIGYEKLQKVQQELSAAD-VDIV 393
Query: 324 ICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYF 364
I DE HRLK ++ + + NDL E+F MV+F NPG+L + F
Sbjct: 394 IADEGHRLKTEKNKSAQAIRGLKTKRRVVLSGTPLQNDLHEYFIMVDFVNPGLLESYSTF 453
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++ +E I+ R+P A++++ + G R+ EL++ F+LR L +
Sbjct: 454 KKEFENPIVRSRQPGASKKDVEKGKARNEELASLTKLFVLRHPQGNLRS-------TRAF 506
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
L PL KLCN P L+ D K G
Sbjct: 507 WGLPPL-----------------------------------KLCNSPGLLAD--KPGKET 529
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
+ + P++ +S S SGK VL RLL LR TD++IVLVSN
Sbjct: 530 NENVKGLLAGVNPKLLESKSDSH----------SGKFRVLERLLLALRNTTDEKIVLVSN 579
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP-SKNEFVFLLSSKAGGCGL 603
YT TLDL L R R YLRLDGTT +KRQ+LV+ FN S F FLLS+K+GG GL
Sbjct: 580 YTSTLDLLQNLLRSRGLSYLRLDGTTPTNKRQELVDQFNRTNSTTAFAFLLSAKSGGAGL 639
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NLIG +RL LFD DWNPA D QA AR+ RDGQ++ V IYR L+TG +EK+YQRQ++K G
Sbjct: 640 NLIGASRLALFDLDWNPATDAQAMARIHRDGQRREVKIYRMLTTGCFDEKIYQRQLTKIG 699
Query: 664 LQ-KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQ--NYDDGA 718
L V+ Q+ T SS T E+LRDLF+ + H ++ C C+ Y GA
Sbjct: 700 LADSVMDQKATASSFT------LEELRDLFSLDTETNCLTH-DLLCCECEGKGYVAGA 750
>gi|47225441|emb|CAG11924.1| unnamed protein product [Tetraodon nigroviridis]
Length = 908
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 295/563 (52%), Gaps = 108/563 (19%)
Query: 144 EENFTLPPGVDP-----LVLWQPEEPQNDGGN-----LVPITVDPLLVRFLRPHQREGVQ 193
EE T P DP LV+ +P N +V + +DP L LRPHQREG+
Sbjct: 136 EEEQTCKPRHDPTAPGALVMPRPSSTHQWSNNKSGLPVVDVVMDPHLNVHLRPHQREGLV 195
Query: 194 FMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDGKPMVKKAIIVTPT 252
F++ECV G+ +AG HG ILAD+MGLGKTLQS+AL +TLL QG + G+P+VK+ ++VTP
Sbjct: 196 FLYECVMGM-RSAGCHGAILADEMGLGKTLQSVALSWTLLKQGPYGGRPVVKRVLVVTPG 254
Query: 253 SLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDS------------------FTDP 293
SLV NW E KW+G R+Q+ + + R G+ S + P
Sbjct: 255 SLVQNWGKEFNKWLGRERIQVFTV-DQVRPAGGEGVRSSFLIRRVGCLQDHRMEHFVSSP 313
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCD-----LLICDEAHRLKNDQTLTN--------- 339
S VL++SYE C E L++CDE HRLKN T+
Sbjct: 314 LHS--VLVISYEML------LRCLEQVQKVDFGLIVCDEGHRLKNSSIKTSSALNSLSCS 365
Query: 340 ----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
+NDL+EF+A++ F NPGILG + +RR YE I+ R+P+ EEE+ LG
Sbjct: 366 RRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRRVYEEPILRSRQPSCAEEERVLGE 425
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
ER++ELS F LRRT +++ +LPP++ + C +PLQ +Y + + +
Sbjct: 426 ERAAELSRLTGTFTLRRTQEIINRYLPPRLDWTLFCAPSPLQLHVYQRLLCHRVFTSCLQ 485
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIK-------------------------SGNPG 484
+ LA ITALKKLCNHP L+Y ++ +G
Sbjct: 486 AGAQAHTHLACITALKKLCNHPALLYSAVQYPSSPTPAEVVRADRAGVCLRREEPTGGSE 545
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT-DDRIVLVS 543
F D + PE +S SG + D SGK+ VL+ LLG +RQ + DR+V+VS
Sbjct: 546 EPSFYDGLAELSPESYS--SGELSTAD------SGKLLVLSELLGAIRQLSPSDRVVVVS 597
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
NYT+TLDL LDG +RQ+LV+ FN P F+FLLSSKAGG GL
Sbjct: 598 NYTKTLDLLQD----------LLDGHMPTGQRQRLVDSFNSPFSQNFLFLLSSKAGGLGL 647
Query: 604 NLIGGNRLVLFDPDWNPANDKQA 626
NL+G + LVL+D DWNPAND Q
Sbjct: 648 NLVGASHLVLYDIDWNPANDIQV 670
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ GTIEE+V+QRQ+SK+GL + A + ST +LRDLF+ D
Sbjct: 776 WFPAGTIEERVFQRQVSKQGLSGTVVDL---GKAAEHTSFSTNELRDLFSLTD 825
>gi|190345413|gb|EDK37294.2| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC
6260]
Length = 888
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 235/601 (39%), Positives = 324/601 (53%), Gaps = 80/601 (13%)
Query: 165 QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ 224
QN G I +D L LRPHQ+E V F+ ECV+G + G G +LAD+MGLGKTL
Sbjct: 249 QNSG-----IDIDSKLDSVLRPHQKEAVAFLHECVTGQRSYQG-KGALLADEMGLGKTLS 302
Query: 225 SIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIAL-----CES 278
+IAL++ L+ + DG + K +IV P +L++NW E KKW+ R+ ++++ +
Sbjct: 303 TIALIWKLVRRNSDGVQVCNKVLIVCPVTLIANWNREFKKWIDINRLGVLSINGKQGAAA 362
Query: 279 TRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ--- 335
+ D I +F VLI+ YE +S+ S DLL+CDE HRLK+
Sbjct: 363 DKQD----IKNF-GKNRVYNVLIMGYEKVLTCASELS-EIKFDLLVCDEGHRLKSSTNKV 416
Query: 336 -------------TLTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
LT +NDL EFF +V+F NPGILG + F++ Y I+ R+
Sbjct: 417 LKVLKHLDVEKKIVLTGTPIQNDLVEFFTIVDFINPGILGSFSSFQKDYIRHILRSRDVN 476
Query: 380 ATEEEKKLGIER----SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
T +E I+R SS+L A N+F LRRT+ +LS+ L K ++ CK T LQ L+
Sbjct: 477 CTNKEI---IDRGDLLSSKLIALTNEFTLRRTSDILSSFLTTKTDVILFCKPTTLQLSLF 533
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
SK K + S + IL IT KK+CN P L+
Sbjct: 534 EDIKRSKTFKASYS--GSRGGILGLITLFKKICNSPSLL--------------------- 570
Query: 496 PPEMFSGRSGSWTGGD-GAWVEL----SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
PE S +G D G VEL SGK+ VL LL + QR +++VLVSNYTQTL
Sbjct: 571 APEGKVEES-ELSGSDFGLNVELNNKTSGKLLVLIPLLLEI-QRLGEKVVLVSNYTQTLK 628
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGN 609
L Q + LRLDGTT+ +R KLVN FN S ++ +FLLS+KAGG GLNL+G +
Sbjct: 629 LLEQSVNKLNMKSLRLDGTTANKERDKLVNQFNKSSAESTMIFLLSAKAGGVGLNLVGAS 688
Query: 610 RLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ 669
RL+LFD DWNP+ D QA AR+ RDGQK+ VFIYR L+TG I+EK++QRQ+ K L
Sbjct: 689 RLILFDNDWNPSVDLQAMARIHRDGQKRPVFIYRLLTTGCIDEKIFQRQLMKNNLSDKFL 748
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNS 729
+ DS + + ++DL+DLF+ + S H+ + C C + AE E NS
Sbjct: 749 DNKVDS---KTDVFDSDDLKDLFSV-SETSSSTHDLLEC-ECGGDGELAEVPLEDSSENS 803
Query: 730 A 730
+
Sbjct: 804 S 804
>gi|448524405|ref|XP_003868979.1| Rdh54 DNA-dependent ATPase [Candida orthopsilosis Co 90-125]
gi|380353319|emb|CCG26075.1| Rdh54 DNA-dependent ATPase [Candida orthopsilosis]
Length = 825
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 206/563 (36%), Positives = 312/563 (55%), Gaps = 63/563 (11%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP+L LRPHQ EGV F++EC+ G N G +GC+LAD+MGLGKTL +I ++T
Sbjct: 203 VPVRIDPILASKLRPHQLEGVSFLYECLMGFRNFKG-NGCLLADEMGLGKTLMTITTIWT 261
Query: 232 LLCQGF---DGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGI 287
LL Q KP+V K ++V P +L++NW E KKW+G +V ++ L S DD I
Sbjct: 262 LLKQNPYPDQKKPVVNKVLVVCPVTLINNWREEFKKWLGLNKVNVLTLNNSMSDDKRDII 321
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLTN------ 339
+ + QVLI++YE H + S + DLL+CDE HRLKN ++ + N
Sbjct: 322 N--FGKLNVYQVLIINYEKVLAHYEELS-TIPFDLLVCDEGHRLKNSANKVMINLTKLNI 378
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE-KKL 387
+N L EF+ +V+F NP +L DA F++ + I R+ +E KK
Sbjct: 379 SKKIVLTGTPIQNYLVEFYTLVSFLNPRVLPDAKTFQKEFINPITRARDVNCFNQEIKKQ 438
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
G E S L + ++FILRRT A+L N+L K ++ T LQ +L++ S+ ++
Sbjct: 439 GEEVSQRLISLTHKFILRRTQAILENYLTNKTDILLFVPPTQLQLDLFDLIKKSEKFQQL 498
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
S L+ I +K+CN P L+ + F I
Sbjct: 499 DSGTIS----LSLINLFRKICNSPSLL---------ASDDFYKSI--------------- 530
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
T G SGK++ L L+ + + +++VL+SNYT TLDL ++ ++ YLRLD
Sbjct: 531 TDGSLKLSTSSGKLNALIPLVLEITAQ-KEKLVLISNYTTTLDLLEKVIKKLNLQYLRLD 589
Query: 568 GTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
GTT + R KLVN FN D S + VFLLSSK+GG G+NL+G +RL+L+D DWNP+ D Q+
Sbjct: 590 GTTPNNIRGKLVNRFNRDESIS--VFLLSSKSGGTGINLVGASRLILYDNDWNPSTDLQS 647
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
+R+ RDGQ+K +IYR +TG I+EK++QRQ+ K K+ + + ++++ +
Sbjct: 648 MSRIHRDGQRKPCYIYRIFTTGCIDEKIFQRQLMK---NKLSSKFLDNDASSKSDIFDYN 704
Query: 687 DLRDLFTFHDDVRSEIHENMHCT 709
DL++LF +S H+ + C+
Sbjct: 705 DLKNLFEIDVGTKSNTHDLLGCS 727
>gi|146419519|ref|XP_001485721.1| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC
6260]
Length = 888
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 225/600 (37%), Positives = 318/600 (53%), Gaps = 80/600 (13%)
Query: 150 PPGVDPLV-----LWQPEEP------QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFEC 198
P DPL+ Q ++P QN G I +D L LRPHQ+E V F+ EC
Sbjct: 223 PHARDPLLDVTNNKIQKQQPVFKQNYQNSG-----IDIDSKLDLVLRPHQKEAVAFLHEC 277
Query: 199 VSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
V+G + G G +LAD+MGLGKTL +IAL++ L+ + DG + K +IV P +L++NW
Sbjct: 278 VTGQRSYQG-KGALLADEMGLGKTLSTIALIWKLVRRNSDGVQVCNKVLIVCPVTLIANW 336
Query: 259 EAEIKKWVG-GRVQLIAL-----CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSS 312
E KKW+ R+ ++++ + + D I +F VLI+ YE +S
Sbjct: 337 NREFKKWIDINRLGVLSINGKQGAAADKQD----IKNF-GKNRVYNVLIMGYEKVLTCAS 391
Query: 313 KFSCSESCDLLICDEAHRLKNDQ----------------TLTN---RNDLEEFFAMVNFT 353
+ S DLL+CDE HRLK+ LT +NDL EFF +V+F
Sbjct: 392 ELS-EIKFDLLVCDEGHRLKSSTNKVLKVLKHLDVEKKIVLTGTPIQNDLVEFFTIVDFI 450
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER----SSELSAKVNQFILRRTNA 409
NPGILG + F++ Y I+ R+ T +E I+R SS+L A N+F LRRT+
Sbjct: 451 NPGILGLFSSFQKDYIRHILRSRDVNCTNKEI---IDRGDLLSSKLIALTNEFTLRRTSD 507
Query: 410 LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCN 469
+LS+ L K ++ CK T LQ L+ SK K + S + IL IT KK+CN
Sbjct: 508 ILSSFLTTKTDVILFCKPTTLQLSLFEDIKRSKTFKASYS--GSRGGILGLITLFKKICN 565
Query: 470 HPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLG 529
P L+ K G + + E+ + SG +E+
Sbjct: 566 SPSLLAPEGKVEESELLGLDFGLNV---ELNNKTSGKLLVLIPLLLEI------------ 610
Query: 530 HLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS-KN 588
QR +++VLVSNYTQTL L Q + LRLDGTT+ +R KLVN FN S ++
Sbjct: 611 ---QRLGEKVVLVSNYTQTLKLLEQSVNKLNMKSLRLDGTTANKERDKLVNQFNKLSAES 667
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
+FLLS+KAGG GLNL+G +RL+LFD DWNP+ D QA AR+ RDGQK+ VFIYR L+TG
Sbjct: 668 TMIFLLSAKAGGVGLNLVGASRLILFDNDWNPSVDLQAMARIHRDGQKRPVFIYRLLTTG 727
Query: 649 TIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
I+EK++QRQ+ K L + DS + + ++DL+DLF+ + S H+ + C
Sbjct: 728 CIDEKIFQRQLMKNNLSDKFLDNKVDS---KTDVFDSDDLKDLFSV-SETSSSTHDLLEC 783
>gi|254567481|ref|XP_002490851.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238030647|emb|CAY68571.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328351234|emb|CCA37634.1| DNA repair and recombination protein RAD54B [Komagataella pastoris
CBS 7435]
Length = 840
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 312/562 (55%), Gaps = 65/562 (11%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ VDPLL + LRPHQREGV+F++ C+ G GCILAD+MGLGKTL +I L++TLL
Sbjct: 201 VVVDPLLSQHLRPHQREGVKFLYNCLDGSKELPH-KGCILADEMGLGKTLTTITLIWTLL 259
Query: 234 CQG-FDGK-PMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCEST--RDDVVSGID 288
Q D K P VKK ++V P +L+ NW+ E +KW+G RV ++ + ++ +D S I+
Sbjct: 260 KQNQVDHKRPAVKKVLVVCPVTLIHNWKREFRKWLGMNRVSILEMSSASNVEEDKRSVIN 319
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND-----QTLTN---- 339
Q+LI+ YE + +++ S + DLL+CDE HRLKN ++LT+
Sbjct: 320 --FGRTRVYQILILGYEKLQKLTNEIS-QINVDLLVCDEGHRLKNSNNKVMKSLTSFQIP 376
Query: 340 ----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE-KKLG 388
+NDL EF+ ++NF PGI+GD A F R Y I+ RE + K G
Sbjct: 377 RKIILTGTPIQNDLNEFYNIINFVQPGIVGDFASFNRDYMRPILQAREINCLNRKIIKAG 436
Query: 389 IERSSELSAKVNQFILRR-TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
E+S+ L +FILRR + +N LPPK ++ +T LQ ELY I + K
Sbjct: 437 NEKSNSLVELTQKFILRRKAKDINTNFLPPKTELILMVPMTELQQELYKDIIETNQAKLG 496
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
+ + ++ L I L+K+CN P L+ D D R+ F+
Sbjct: 497 LIND--RNFFLQKILILRKICNSPSLLKDE-----------PDFARYNLGNRFN------ 537
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
SGK+ + LL L + T+++ V+VSN+T+TLD+ + + Y RLD
Sbjct: 538 ----------SGKIKLTVLLLRKLFETTNEKCVIVSNFTKTLDVLQLIIEHNNWKYHRLD 587
Query: 568 GTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
G++ R K+V FN+ P K+ F+ LLSSKAGG GLNLIG +RL+LFD DWNP+ D QA
Sbjct: 588 GSS--KGRDKIVRDFNESPQKDRFIMLLSSKAGGVGLNLIGASRLILFDNDWNPSVDIQA 645
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
ARV RDGQK+ FIYR + GTI+EK+ QRQ+ K+ L + D+ +++ + +
Sbjct: 646 MARVHRDGQKRHTFIYRLYTKGTIDEKILQRQLMKQNLS---DKFLDDNDSSKDDVFNDY 702
Query: 687 DLRDLFTFHDDVRSEIHENMHC 708
DL+DLFT D H+ M C
Sbjct: 703 DLKDLFTVDLDTNCSTHDLMEC 724
>gi|410077175|ref|XP_003956169.1| hypothetical protein KAFR_0C00390 [Kazachstania africana CBS 2517]
gi|372462753|emb|CCF57034.1| hypothetical protein KAFR_0C00390 [Kazachstania africana CBS 2517]
Length = 882
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 312/589 (52%), Gaps = 78/589 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI---------------HGCILADD 216
V + VDP + + LRPHQ EGV+FM++C+ L ++ + +GCILAD+
Sbjct: 212 VDVIVDPKISKILRPHQVEGVKFMYDCIFHLDRSSSVESNEKNLVLNENFDLNGCILADE 271
Query: 217 MGLGKTLQSIALLYTLLCQ------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
MGLGKTL +I+L++TLL Q G VKK IIV P +L+ NW E K
Sbjct: 272 MGLGKTLMTISLIWTLLKQTPYPQPENCSQNGITLVGHVKKIIIVCPVTLIMNWRNEFAK 331
Query: 265 WVG-GRVQLIALCESTRDDV-VSGIDSFTDPCSSLQVLIVSYE-TFRMHSSKFSCSESCD 321
W+ ++ ++ L S D+ + I +F + QVLI+ YE + S S + D
Sbjct: 332 WLNLNKIGILILKSSNSTDMDKNAIKNFLKIQNIYQVLILGYEKVLSVSQELISLSSNID 391
Query: 322 LLICDEAHRLKN-DQTLTN------------------RNDLEEFFAMVNFTNPGILGDAA 362
L++CDE HRLKN + + N +NDL EFF +++F NP I+G
Sbjct: 392 LIVCDEGHRLKNTNSKVLNILKELNVKSKILLSGTPIQNDLIEFFTIIDFINPDIIGSFN 451
Query: 363 YFRRYYETSIICGREPTATEEEKKL--GIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
F++ Y I R+ E + G +S EL ++FILRRTNA+L+ +LPP+
Sbjct: 452 QFKKNYIVPITKARDVKNKFNENVIETGEIKSQELIDLTSKFILRRTNAILNKYLPPRTD 511
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVK-RAISEETKQSKILAYITALKKLCNHPKLIYDTIK 479
++ CK T Q +++ + N+ +++ + S LA IT KK+CN P L
Sbjct: 512 IILFCKPTKEQLTSFDNILLGSNLNFQSLLNNSTSS--LALITLFKKICNSPSL-----A 564
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD--D 537
+ +P P S SGK+ VL L+ +++ + +
Sbjct: 565 NSDPYYNKLSSKDHKQMPRSVSTN--------------SGKLKVLVSLVNSIKKMNNPME 610
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+IV+VSNYTQTLDL L ++RLDG+T + +R +V+ FN+ +N VFLLS+K
Sbjct: 611 KIVIVSNYTQTLDLIEGLISSLALTFVRLDGSTPVKQRNSIVSSFNN-DQNVNVFLLSAK 669
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
+GG GLNLIGG+RL+LFD DWNP+ D QA +R+ RDGQKK FIYR ++TG I+EK+ QR
Sbjct: 670 SGGVGLNLIGGSRLILFDNDWNPSVDLQAMSRIHRDGQKKHCFIYRLITTGCIDEKILQR 729
Query: 658 QMSKE--GLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
Q+ K L+ + +S+ + DL+DLFT + S H+
Sbjct: 730 QLMKNNLSLKFLDNDTNNNSNNNNDDLFDKADLKDLFTVVKNSNSNTHD 778
>gi|328871058|gb|EGG19429.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 830
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 208/588 (35%), Positives = 294/588 (50%), Gaps = 127/588 (21%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P + VL P + + VDP L LRPHQR GV+F+++C++G + G +
Sbjct: 218 PNATNAFVLHTPTIEEIKNNTATHVVVDPHLSSKLRPHQRLGVEFLYQCLTGNKHEYG-Y 276
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDG--KPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
G ILAD MGLGKTLQ++ L++T++ Q + KPMVKK IIV P +L+ NW +EI W+G
Sbjct: 277 GAILADQMGLGKTLQALTLIWTMVQQNPNSSTKPMVKKVIIVAPATLIGNWRSEIITWLG 336
Query: 268 -GRVQLIALCE----STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
+++ + L + S D + +S TDP VLI+SYE +S++ L
Sbjct: 337 REKLKPVTLSDKLKVSKADQLKDFGESQTDP-----VLIISYEQCVSYSNQLEKLSDIGL 391
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
LI DE HR+KN T T +NDL EF+AMV+F NPG LG
Sbjct: 392 LIADEGHRIKNATTKTAMAVNSIKATRRIILSGTPIQNDLYEFYAMVDFVNPGALGTPNE 451
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
FRR + T I R+ + + EK GI +S +L+ + FILRR + +L +LP K +++
Sbjct: 452 FRRDFATPIQKSRDSNSNQREKDQGILKSIQLAKMTSSFILRRKSNVLEKYLPLKSTQII 511
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
CK+ QS++Y I+S ++ L+ I LKKLCN
Sbjct: 512 FCKMPSTQSKIYQETINS---------FAEKDFSLSNIILLKKLCNSKD----------- 551
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
SGK+ + L+ L + ++IVLVS
Sbjct: 552 ----------------------------------SGKLLFVGDLIKSLPR--GEKIVLVS 575
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
NYTQTLD+F LC+E + +LRLDG RQ L+ FNDP+ VFLLS+KAGG G+
Sbjct: 576 NYTQTLDIFETLCKELSFGFLRLDGQVEADSRQFLITKFNDPADQHKVFLLSAKAGGVGI 635
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NLIG N +VLFDPDWNPA D QA RVWR GQ+K F
Sbjct: 636 NLIGANHIVLFDPDWNPAVDLQAMERVWRQGQEKNYF----------------------- 672
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRC 711
+G F +T++L+D+F+F+ + E H+ + C +C
Sbjct: 673 --------------DKGGF-TTDELKDIFSFNSNTSCETHDLLQC-KC 704
>gi|340502773|gb|EGR29425.1| snf2 family n-terminal domain protein [Ichthyophthirius
multifiliis]
Length = 632
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 292/556 (52%), Gaps = 71/556 (12%)
Query: 195 MFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG-FDG-KPMVKKAIIVTPT 252
M+EC++G I GCILAD MGLGKTLQ+IAL++ LL + F KP + K IIVTP
Sbjct: 1 MYECITGK-RGTEISGCILADSMGLGKTLQTIALIWVLLRRNPFSSCKPFLNKVIIVTPV 59
Query: 253 SLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSS 312
SL+ W+ EI+KW+G + + R+DV++ F S +VL++SY+ FR H
Sbjct: 60 SLLGVWKKEIRKWLGDERLIPKIAIGKREDVITTCKEFAG--SYQKVLLISYDQFRTHVK 117
Query: 313 KFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFT 353
F+ + CDLLI DE H+LKN T + N L E ++ + F
Sbjct: 118 IFN--KICDLLIFDEGHKLKNMNIKTFKQFDLIQCKRRIILTGTPLQNSLNELYSCIKFV 175
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
NP I + F+ + II + A+EE K RS ELS + +F+LRR +L
Sbjct: 176 NPFIFENDKQFKSLFSDPIIASIKTDASEEIIKQAKMRSKELSNIIQKFVLRRKADILEK 235
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKL 473
LPPK + K+T LQ LY+ V++ Q+ +L +T+++K+ NHP++
Sbjct: 236 LLPPKYEFYIFLKMTELQKMLYSK------VQQNYDFNENQTAVLTLLTSIRKILNHPQI 289
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR- 532
+Y N + F+ ++FP + + W S K L +L ++
Sbjct: 290 LYTD--QENKNSFEFK---QYFPHDF---QLNDWAN--------SVKTQFLKDILYQIKD 333
Query: 533 ----QRTDDRIVLVSNYTQTLDLFAQLCRERR---YPYLRLDGTTSISKRQKLVNHFNDP 585
+ ++I++VS YTQTLDL QL + + LRLDG+ ++RQKL++ F D
Sbjct: 334 QQKLKNQKEKIIIVSYYTQTLDLIQQLINQHESEHFKILRLDGSVQSTQRQKLIDQFQDQ 393
Query: 586 SKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFL 645
+ N +FLL +KAGG GLNL NR++L + DWNP+ND Q R+WRDGQ K V+IYR
Sbjct: 394 NSNYNIFLLCAKAGGTGLNLTAANRMILMEVDWNPSNDLQVMGRIWRDGQTKNVYIYRLF 453
Query: 646 STGTIEEKVYQRQMSKEGL-------QKVIQQEQTDS--------SATQGNFLSTEDLRD 690
TGT+EEK+ QRQ KE L +++IQQ D+ QG L+ ++ +
Sbjct: 454 CTGTMEEKILQRQFLKEDLSSNVIDEKQIIQQHDQDNLKMLFQYDKKYQGKCLTFQEEEN 513
Query: 691 LFTFHDDVRSEIHENM 706
F ++ + +NM
Sbjct: 514 EFDSFAEITPDFDQNM 529
>gi|303280531|ref|XP_003059558.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459394|gb|EEH56690.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 553
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/550 (37%), Positives = 285/550 (51%), Gaps = 63/550 (11%)
Query: 156 LVLWQPEEPQN-DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL--------LNAA 206
LV+ EE + G + + VDP + + LRPHQREGV++M+ V G +A
Sbjct: 19 LVMCTTEEATAMNAGPGIAVVVDPFVAKKLRPHQREGVRWMWRVVHGFEPVGDGRRRDAD 78
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
GC+LADDMGLGK+LQS+AL+YT+L QG G P K+A++V P SLV W AE KW+
Sbjct: 79 PHLGCLLADDMGLGKSLQSLALIYTMLHQGPRGTPTAKRALLVCPASLVGAWGAECAKWL 138
Query: 267 GGRVQLIALCESTRDDVVSGIDSFT--------DPCSSLQVLIVSYETFRMHSSKFSCSE 318
GG AL E D + + +L+ SYET R + + ++
Sbjct: 139 GGVRAQTALAEGGGTDAADAYEKWARGPPPGGKSAFDRWPILVTSYETLRRFAPVAAAAK 198
Query: 319 SCDLLICDEAHRLKN----DQTLTN-----------------RNDLEEFFAMVNFTNPGI 357
DL+ICDEAHRL+N QTL +NDL+E+ A+++F PG+
Sbjct: 199 P-DLMICDEAHRLRNAQQGSQTLAALRTVDAPRRVLLTGTPVQNDLDEYAAVMDFACPGL 257
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG + F R + + G EP A+ E + + EL+A ++ +LRR ++ + HLP
Sbjct: 258 LGHMSDFHRKFTAVVRRGGEPDASASEIERAKVAAKELNALTSKRVLRREASVNAAHLPA 317
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K +V C LTP Q LY +K V + E S + A I L++L N +
Sbjct: 318 KTEMIVFCSLTPTQRGLYEE--GAKVVGEWVGGEGTASALCA-IGLLRQLAN--SVDQAL 372
Query: 478 IKSGNPGTTGFEDCI-RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR-- 534
+ T + + PPE G GS GK+ L LL L +
Sbjct: 373 DAADAAAETDLRARLQKNVPPEYEGGIDGS------------GKLATLRALLRELTKMDG 420
Query: 535 ---TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV 591
+R+V+VS ++ LD A +CR+ P RLDG + R LV FN S V
Sbjct: 421 SRDGGERVVVVSGFSAALDAAAVVCRDLGLPADRLDGRVPPNARSGLVRDFNRGSGGR-V 479
Query: 592 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIE 651
LLS AGG GLNL+G +RL+LFD WNPA+D+QA ARVWRDGQ + V IYR L+ GT+E
Sbjct: 480 MLLSCVAGGAGLNLVGASRLILFDTSWNPAHDRQAMARVWRDGQTRPVTIYRLLAAGTVE 539
Query: 652 EKVYQRQMSK 661
EKV+QRQ+ K
Sbjct: 540 EKVFQRQLMK 549
>gi|326469499|gb|EGD93508.1| dsDNA-dependent ATPase Rad54 [Trichophyton tonsurans CBS 112818]
Length = 613
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/420 (44%), Positives = 246/420 (58%), Gaps = 53/420 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP+ +DP L + LRPHQ EGV+F++ C +GL++ HGCI+AD MGLGKTLQ I L++T
Sbjct: 215 VPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNA-HGCIMADGMGLGKTLQCITLMWT 273
Query: 232 LLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIALCESTR 280
LL Q + GKP V+KA+I P +LV NW E+ KW+G G+ L R
Sbjct: 274 LLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLR 333
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
++ S P VLIVSYET RM+S + ++ LL+CDE HRLKN + T
Sbjct: 334 QWAIASGRSVVRP-----VLIVSYETLRMNSDELRDTQ-IGLLLCDEGHRLKNADSQTYV 387
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+NDL E+F++++F NPGILG + F + YE I+ GR+ T
Sbjct: 388 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 447
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+E++K G ER +EL VN+FI+RR+N LLS +LP K VV C L P Q +LYNHFI S
Sbjct: 448 DEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQS 507
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF- 500
+K + K S+ L I LKKLCNHP L+ + PG C ++FP +M
Sbjct: 508 PEIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--KLSEDLPG------CEQYFPEDMMV 557
Query: 501 -SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
+GR G W SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R
Sbjct: 558 SNGRRGDREV--KTW--YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRAR 613
>gi|207345463|gb|EDZ72281.1| YGL163Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 405
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/382 (46%), Positives = 236/382 (61%), Gaps = 36/382 (9%)
Query: 299 VLIVSYETFRMHSSKFSCSESCD--LLICDEAHRLKNDQTLTN----------------- 339
VLI+SYET R + + ++C+ L++ DE HRLKN +LT
Sbjct: 23 VLIISYETLRRNVDQL---KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGT 79
Query: 340 --RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
+NDL E+FA+++F+NPG+LG A FR+ +E I+ GR+ AT++E G + +LS
Sbjct: 80 PIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLST 139
Query: 398 KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI 457
V++FI+RRTN +L+ +LP K V+ L PLQ+ELYN I S+ VK+ + S+
Sbjct: 140 IVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKV-VKGVGGSQP 198
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
L I LKKLCNHP L+ + + D GS +
Sbjct: 199 LRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYNM---------PGS--KARDVQTKY 247
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
S K +L R L ++ +DD+IVL+SNYTQTLDL ++CR + Y +RLDGT SI+KRQK
Sbjct: 248 SAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQK 307
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
LV+ FNDP EF+FLLSSKAGGCG+NLIG NRL+L DPDWNPA D+QA ARVWRDGQKK
Sbjct: 308 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKK 367
Query: 638 RVFIYRFLSTGTIEEKVYQRQM 659
FIYRF+STGTIEEK+ + +
Sbjct: 368 DCFIYRFISTGTIEEKILSKTI 389
>gi|63054489|ref|NP_593038.2| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe 972h-]
gi|38258935|sp|Q09772.3|RDH54_SCHPO RecName: Full=Meiotic recombination protein rdh54; AltName:
Full=ATP-dependent helicase rdh54; AltName:
Full=Meiotically up-regulated gene 34 protein; AltName:
Full=RAD54 protein homolog 2
gi|30519798|emb|CAA91068.3| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe]
gi|31323296|gb|AAP44116.1| meiotic recombination factor Rdh54 [Schizosaccharomyces pombe]
Length = 811
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 297/570 (52%), Gaps = 63/570 (11%)
Query: 150 PPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
P + LV+ +P+ D V + +DP L + L HQREGV F+++C+ G+ G +
Sbjct: 173 PTVLGALVMSRPKTW--DPRTHVDVVIDPFLSKHLYSHQREGVSFLYDCLLGMEGKCG-Y 229
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGF--DGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
ILAD+MGLGKTLQ+I +++TLL Q + + + A++V P +L+ NWE E W+G
Sbjct: 230 SAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLG 289
Query: 268 G-RVQL-IALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
R+ + IA C + S + ++I YET + + C DLLIC
Sbjct: 290 HERIHVYIARCAEDFQEFTSN--------KTYSIIITGYETVCTYLRNYGCGIDIDLLIC 341
Query: 326 DEAHRLKN--DQTLTN-----------------RNDLEEFFAMVNFTNPGILGDAAYFRR 366
DEAHRLK+ QT +NDL E+F+MVNF PG LG F+
Sbjct: 342 DEAHRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKA 401
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
YE I+ R A+ + LG R L + F LRR +L+ HLPP+ V+ K
Sbjct: 402 QYERPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIK 461
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
T Q +Y H + K ++ ++ KIL T L K+CN L+ + + N +T
Sbjct: 462 PTHQQENVYGHVL--DGFKSSVDQKGYYLKIL---TRLSKICNSTILLRN--EKENFLST 514
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
+D F M S K+ +LA LL QR + V+VS Y
Sbjct: 515 ELQDKHVFEQENMLLS---------------SSKLQILAALLKSF-QRGCQKAVIVSQYK 558
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF-VFLLSSKAGGCGLNL 605
+TL+L + +L G+T S+R +V++FN S EF V LLSSKAGGCGLNL
Sbjct: 559 ETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNL 618
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
G RL++++P WNPA D QA +R++R GQK+ V IY FLS+G ++E+++ RQ +K+GL
Sbjct: 619 TGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLS 678
Query: 666 KVIQQEQTDSSATQ-GNFLSTEDLRDLFTF 694
DS A+Q NF + ED++ LF++
Sbjct: 679 SSF----IDSDASQKKNFFTGEDIKTLFSY 704
>gi|240280582|gb|EER44086.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
H143]
Length = 649
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 261/476 (54%), Gaps = 77/476 (16%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT---- 222
DG +P+ +DP L + LRPHQ EGV+F++ C +G+++ +GCI+AD+MGLGKT
Sbjct: 201 DGRPKIPVVIDPKLAKVLRPHQVEGVKFLYRCTTGMIDPKA-NGCIMADEMGLGKTVGSN 259
Query: 223 ---------------LQSIALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
LQ I LL+TLL Q + GK ++K II P++LV NW E KW+
Sbjct: 260 EFSRWSHGAKYLYFQLQCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFVKWL 319
Query: 267 G----------GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC 316
G G+ + L R VS S P VLIVSYET R++ +
Sbjct: 320 GEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVRP-----VLIVSYETLRLYVDELK- 373
Query: 317 SESCDLLICDEAHRLKN--DQTLTN-----------------RNDLEEFFAMVNFTNPGI 357
LL+CDE HRLKN QT T +NDL E+F+++NF NP I
Sbjct: 374 DTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNI 433
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG F + YE I+ GR+ ++E++K G E +EL VN+FI+RRTN +LS +LP
Sbjct: 434 LGTRNEFHKKYEMPILRGRDADGSDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPV 493
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K VV C+L P Q++LYN+FI S ++K + K S+ L I LKKLCNHP L+
Sbjct: 494 KYEHVVFCQLAPFQTDLYNYFIQSPDIKSLL--RGKGSQPLKAIGILKKLCNHPDLL--N 549
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
+ + PG+ + P + S +W SGKM VL R+L +RQ T+D
Sbjct: 550 LGADLPGSE------QILPDDYVPLESRGRDRDVRSW--YSGKMMVLDRMLARIRQDTND 601
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
+IVL+SNYTQTLDLF +LCR R+Y LRLD +LV+ FNDP+ EFVF
Sbjct: 602 KIVLISNYTQTLDLFERLCRTRQYGCLRLD---------ELVDKFNDPNGEEFVFF 648
>gi|145350214|ref|XP_001419509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579741|gb|ABO97802.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 306/576 (53%), Gaps = 54/576 (9%)
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGL----LNAAGIHGCILADDMG 218
E N +T DP + LR HQR G ++M+ + G+ + G G +LAD+MG
Sbjct: 57 EATNGTARAASVTCDPFVSGKLREHQRAGARWMYRALHGIGEDAASEGGTRGVLLADEMG 116
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCE 277
LGK+LQ +A+L+T+L QG GKP ++A+ V P SL+ NW AE KW+GG RVQ +L E
Sbjct: 117 LGKSLQVLAVLWTMLRQGPCGKPTARRAVFVCPASLIGNWGAEFTKWLGGVRVQ-ASLAE 175
Query: 278 STRDDVVSGIDSF-TDPCSSLQ-------VLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ V + D + +P + VL++SYET R + + + +L++CDEAH
Sbjct: 176 GNAEAVDAACDRWCAEPAKGSKSSFDRWPVLVMSYETARRLAPRVRAMKP-ELMVCDEAH 234
Query: 330 RLKN---DQTLTN-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
RL+N QT+T +N+L E+ A+++F PGILG F+R +
Sbjct: 235 RLRNAMGSQTMTALREINAPMRVLLTGTPIQNNLNEYAAVLDFAQPGILGPLEDFQRDFT 294
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
I E A++E+ G + + EL+ + IL R ++ + +LP K VV C+LT
Sbjct: 295 QPIQRQYERGASKEQIAQGRKVADELNRRTKGKILSRKSSTNAAYLPKKTELVVLCRLTS 354
Query: 430 LQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE 489
Q + Y +K V+ S +T S A + A+ L + D I + G +
Sbjct: 355 AQRQAYEA--GAKLVESWTSSDTSASSGAAALCAIGILRQTANEV-DQILARTSGKS--- 408
Query: 490 DCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD--DRIVLVSNYTQ 547
+ M + GG ++ SGK +L R+L L++R D +R+V+VS Y+
Sbjct: 409 --VDDLKAAMAKALPRDYAGG----IDGSGKFTILRRMLEALKERGDPTERVVVVSGYSA 462
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
+L +C++ RLDGT ++ R +V +FN + V LLS AGG GLNL+G
Sbjct: 463 SLATAEDICKKLNVTTSRLDGTVAVDLRTSIVKNFNSGQGGQ-VMLLSVVAGGAGLNLVG 521
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
NRL+L D WNPA+D+QA R+WRDGQ K V IYR +S GT+E+KV++RQ+ KE L+
Sbjct: 522 ANRLILMDVSWNPAHDRQAMGRIWRDGQTKPVTIYRLVSAGTVEQKVFERQLGKEVLKNT 581
Query: 668 IQQEQTDSSATQGNFLSTED-LRDLFTFHDDVRSEI 702
++ T +G+ +T+D L + F D SEI
Sbjct: 582 VESGYT---GYEGDGFTTKDSLVGIVKFTGDELSEI 614
>gi|224013540|ref|XP_002296434.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968786|gb|EED87130.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1089
Score = 308 bits (790), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 199/592 (33%), Positives = 296/592 (50%), Gaps = 101/592 (17%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGL---LNAA------------------------ 206
I V + LRPHQREG+ F++ CV+G+ LN A
Sbjct: 339 INVPASISTVLRPHQREGIAFLWNCVTGVNGELNRAMERSWMNNNSKGGTMDGDSEDSDE 398
Query: 207 ----------GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVS 256
G +LAD+MGLGKTL +IA +Y F + ++ I+V P+SLVS
Sbjct: 399 DVGKKGGGVVVPRGAVLADEMGLGKTLMTIATIY-----AFHRRQRDRRFIVVCPSSLVS 453
Query: 257 NWEAEIKKWVGGRVQ-LIALCESTRDDVVSGIDSFTDP-CSSLQVLIVSYETFRMHSSKF 314
NW E KW+G Q + ++ ++ + + SF P +VLI+SYE FR+H+
Sbjct: 454 NWAKEFDKWLGKASQPKRVIAKNGGEEGLRNLRSFVPPKPQQAEVLILSYELFRLHAKII 513
Query: 315 SCSESCDLLICDEAHRLKN---DQTLTN-----------------RNDLEEFFAMVNFTN 354
S + +L+ DE HRLKN QTL+ +N+L EF+ + NF
Sbjct: 514 SKATRIGILVVDEGHRLKNTAGSQTLSALNSVDAEARILITGTPIQNNLSEFYNVANFAL 573
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNA-LLSN 413
PGILG+ + FRR YE + + +++ + + G E+S +L A + F++RR +L +
Sbjct: 574 PGILGELSDFRRLYERPMSQANQKNSSKTQNEKGREQSKKLDAITSTFVIRRLQKDVLKS 633
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE---ETKQSKILAYITALKKLCNH 470
LPP+ ++ C+ T Q ELY S R+I L +T ++KLC H
Sbjct: 634 LLPPRTELLLFCRPTERQCELYREI--SNRASRSIGSIRGRDDNDTPLTLLTEVRKLCTH 691
Query: 471 PKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGH 530
P L+ S + LSGK+ VL+ L+
Sbjct: 692 PSLLNKDDSSLSASDD----------------------------ASLSGKLIVLSSLIES 723
Query: 531 LRQR-TDDRIVLVSNYTQTLDLFAQ-LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
+R+ D++++ SN+T L + + R++ P++RLDG+ + RQ +V+ FN+ S N
Sbjct: 724 IREHHPTDKVIITSNFTTALTVVENSILRKKNLPFIRLDGSVDNASRQPIVDSFNNNSVN 783
Query: 589 E-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
F F LSSKAGGCGLNLIG NRL++ D DWNPA D+Q ARV+R GQKK +IYR +T
Sbjct: 784 HSFAFTLSSKAGGCGLNLIGANRLIMVDADWNPATDQQVMARVYRQGQKKPCYIYRMFTT 843
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR 699
GT+EE ++QRQ K L K+ + + S E+LRD FT +D +
Sbjct: 844 GTVEEVIFQRQTQKGNLAKLANDGGSRNEGKTAAKFSAEELRDCFTLKEDCK 895
>gi|328856433|gb|EGG05554.1| hypothetical protein MELLADRAFT_87820 [Melampsora larici-populina
98AG31]
Length = 593
Score = 305 bits (782), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 283/523 (54%), Gaps = 53/523 (10%)
Query: 247 IIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYE 305
+IV P +LV NW E+ KW+G R+ + D S I FT ++I+ YE
Sbjct: 1 MIVCPVTLVKNWAREMNKWLGRSRLNMFVA------DGKSNIKHFTSS-PYYNIIIIGYE 53
Query: 306 TFRMHSSKF-SCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEE 345
R S + + L+I DE HRLK+ + T + N+L E
Sbjct: 54 RLRTLSQEINAVYPPIGLIIADEGHRLKSIEAKTTQALRTLKTHRRVVLSGTPIQNNLNE 113
Query: 346 FFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILR 405
++AMV+F NPGIL D F++ +E I REP +T +K LG R+ EL+ + ++LR
Sbjct: 114 YYAMVDFVNPGILSDFQTFKKKFEQPIAKSREPGSTPSQKALGRSRADELAELSDSYVLR 173
Query: 406 RTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALK 465
R + ++++HLPP+ + L Q ++Y + S ++ S E+ Q +L I LK
Sbjct: 174 RGSDVIAHHLPPRHDYCLFIDLAAAQKKIYAATLASPEIRAVFSGESSQQLVL--INTLK 231
Query: 466 KLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
KLCN L+ + N ++ FP +W + ++LSGKM LA
Sbjct: 232 KLCNSAGLLINETSIQNLA----KNASTLFP---------AWVTRND--IKLSGKMIALA 276
Query: 526 RLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND- 584
L L +TD++I+LVSN+T TLD+ CR + Y RLDG T +KR +V FN
Sbjct: 277 SFLKILHAKTDEKIILVSNFTSTLDVIEAHCRSQNYSLCRLDGKTPQTKRDDIVQTFNRM 336
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
++++FVFLLSSK+GG GLNLIG +RL+LFD DWNPA D QA AR+WR GQKK IYRF
Sbjct: 337 TARSQFVFLLSSKSGGVGLNLIGASRLILFDSDWNPATDLQAMARIWRQGQKKACHIYRF 396
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT--QGNFLSTEDLRDLFTFHDDVRSEI 702
L+TGTI+E ++QRQ++K GL + ++ S +GN ++++L+ LF H
Sbjct: 397 LATGTIDECIFQRQVTKTGLATDLIKDAGVSREVLDRGNTFTSDELKRLFELHTGTPCHT 456
Query: 703 HENMHCTRC---QNYDDGAE-SIGEGDETNSANKNDQSDQEVT 741
H+ + C RC + D+ AE ++G+ +T+S + Q Q T
Sbjct: 457 HDLLGC-RCFETKASDEVAEDAVGQESDTDSLPEASQLFQLAT 498
>gi|385302190|gb|EIF46334.1| dna-dependent atpase [Dekkera bruxellensis AWRI1499]
Length = 547
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 202/552 (36%), Positives = 298/552 (53%), Gaps = 84/552 (15%)
Query: 212 ILADDMGLGKTLQSIALLYTLLCQG--FDGKPMVK-KAIIVTPTSLVSNWEAEIKKWVGG 268
LAD+MGLGKTLQ+I+L++TLL Q KP++ K +I P +LV+NW+ E KW+G
Sbjct: 4 FLADEMGLGKTLQTISLIWTLLKQTPYVGQKPIISNKVLICCPVTLVANWKKEFHKWLGR 63
Query: 269 R------VQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSES-CD 321
+ + L +S R + F++ +VLIV YE +M S + +E+ D
Sbjct: 64 KPNSPSVLALDGAQQSFRQKDRQIVHGFSNT-KVYKVLIVGYE--KMQSLEKELAEAKFD 120
Query: 322 LLICDEAHRLKND--------QTLTNR-----------NDLEEFFAMVNFTNPGILGDAA 362
LL+CDE HRLKN Q L R NDL EF+ +++F NPG+LG
Sbjct: 121 LLVCDEGHRLKNSLSKSFKALQRLDIRRRIILTGTPIQNDLTEFYNLISFVNPGVLGSFK 180
Query: 363 YFRRYYETSIICGREPTA-TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
F++ + I+ RE ++ LG +R+ L + +FILRRTNA L +LP +
Sbjct: 181 EFQKKFIRPILRSRETGCRSKAVISLGKQRTETLVQETKKFILRRTNAELVKYLPKRSDY 240
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEE--------------TKQSKILAYITALKKL 467
V+ + LQ EL+ +K + + EE TK S L+ +T +K+
Sbjct: 241 VLFVPPSRLQLELFRLLAKTKKYTKIMEEEEELQSAGSRAKPSVTKDS--LSLMTTFRKI 298
Query: 468 CNHPKL---------IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS 518
CN P L I D PG+ F ++ G V+ S
Sbjct: 299 CNSPSLLEEDXLFREICDDASGSGPGSA--------FAEQL------------GKKVK-S 337
Query: 519 GKMHVLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
GK+++L +LL + + T D+++++VSN+TQ LD+ + + R Y RLDG+T R K
Sbjct: 338 GKINLLMKLLALIYRNTQDEKVIVVSNFTQVLDVIEKTIQSLRLSYSRLDGSTPSKDRSK 397
Query: 578 LVNHFNDPSKNE-FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
LV+ FN +K FVFLLSSKAGG GLNL+G +RL+LFD DWNP+ D QA AR+ R+GQK
Sbjct: 398 LVDSFNKSTKEACFVFLLSSKAGGMGLNLVGASRLILFDNDWNPSVDLQAMARIHREGQK 457
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ V IYR L++G I+EK++QRQ+ K L + DS+++ +F S DJRD+FT +
Sbjct: 458 RHVRIYRLLTSGCIDEKIFQRQLIKRNLS---DRFVDDSASSDADFFSYSDJRDIFTVSE 514
Query: 697 DVRSEIHENMHC 708
D + H+ M C
Sbjct: 515 DCQCGTHDLMXC 526
>gi|397610434|gb|EJK60831.1| hypothetical protein THAOC_18757 [Thalassiosira oceanica]
Length = 486
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/335 (48%), Positives = 205/335 (61%), Gaps = 47/335 (14%)
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
L ++++VVCC LT +Q +Y H SK+++ + E KQ L I L KLCNHP L+
Sbjct: 4 LSCRLVQVVCCNLTEIQQNMYQHLCTSKDMQHVL--EGKQVNCLGSIQMLMKLCNHPSLV 61
Query: 475 YDTIKSGN-------------------------PGTTGFEDCIRFFPPEMFSGRSGSWTG 509
D S N PG G +F P E G
Sbjct: 62 VDGDSSRNNNIGGRSGRNKKKVCYAEEEKSSAAPGANGIA---KFMPYEAMGG------- 111
Query: 510 GDGAWV--ELSGKMHVLARLLGHLRQRTD--DRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
G A V ELSGKM VL RL+ +R+ + D+IV+VSNYTQTLDL ++CRE + + R
Sbjct: 112 GRNAPVMPELSGKMFVLWRLMREMRKPGNGGDKIVIVSNYTQTLDLIGRMCRENSWGFCR 171
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG+ S+ KRQK+ + FNDPS + FLLSSKAGGCGLNLIGGNRLVLFDPDWNPA DKQ
Sbjct: 172 LDGSISMKKRQKMCDEFNDPSSSLIAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQ 231
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
AAAR WRDGQKKR F YRF++TGT+EEK++QRQ+SKEGLQ V+ ++ Q N LST
Sbjct: 232 AAARCWRDGQKKRCFTYRFMATGTVEEKIFQRQLSKEGLQSVVDDKE------QVNALST 285
Query: 686 EDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
+DLR+LF S+ H+ + C RC+ D A++
Sbjct: 286 KDLRNLFKLRTGTPSDTHDKLKCERCKIIVDDADA 320
>gi|392902165|ref|NP_001255913.1| Protein Y116A8C.13, isoform a [Caenorhabditis elegans]
gi|34556097|emb|CAB55149.2| Protein Y116A8C.13, isoform a [Caenorhabditis elegans]
Length = 833
Score = 298 bits (764), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 193/543 (35%), Positives = 285/543 (52%), Gaps = 72/543 (13%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVS-GLLNAAGIHGCILADDMGLGKTLQSIALLYTL 232
+TVD R LRPHQ+ G+QF+F+ + G G G ILADDMGLGK+LQ++A + L
Sbjct: 196 VTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNGGGGGAILADDMGLGKSLQTMAATWAL 255
Query: 233 LCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTD 292
L + + +I+ P+SLV+NW+AE KW ++ A+ T +D I ++
Sbjct: 256 LKGSKTAQQLANSCLIIVPSSLVNNWKAEFDKW-WRLMRFPAVIALTAND----ITTYQS 310
Query: 293 PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-----DQTLTN-------- 339
+ L++SY+ + H K D+++CDE H+LKN +TL +
Sbjct: 311 TIKLMPYLVISYDLAQRHVEKLKIIRF-DVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLI 369
Query: 340 ------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
+ND EEF+++++F P + G FR K+ +R
Sbjct: 370 LTGTPMQNDFEEFYSLLDFVRPSVFGSIVEFR--------------------KMCSDRPE 409
Query: 394 ELSAKVNQFILRRTNALLS-NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET 452
+L+ +++ +LRRT A + HLP K ++ C +P+Q +++ +
Sbjct: 410 QLNELIDECMLRRTAADVDLKHLPEKHEYILFCAASPIQKHVHSEIC-----------DY 458
Query: 453 KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
L+ I ++L NHPKL+ D ++ + + P + + G
Sbjct: 459 MTGDALSLIFFARQLANHPKLLLDNLREKTEKSKAHKHS-----PLLLAFDGAHMPRGG- 512
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
V+ SGK+ L ++ R + V+VSNY +TLD+ QLC + LRLDG T +
Sbjct: 513 --VKESGKLTALVDMIKCFRL-LQECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQV 569
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
RQKLV FND +FLLS+KAGG GLNLIG +RLVLFD DWNPAND+QA AR+WR
Sbjct: 570 PDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPANDQQAMARIWR 629
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ-EQTDSSATQGNFLSTEDLRDL 691
DGQ + IYR ++TGTIEEK+ QRQ+ K GL VI E D+ AT + EDL+D+
Sbjct: 630 DGQVRPCHIYRLITTGTIEEKMLQRQIKKTGLGCVIDAIEVGDTIAT----FTDEDLKDI 685
Query: 692 FTF 694
FTF
Sbjct: 686 FTF 688
>gi|341886127|gb|EGT42062.1| hypothetical protein CAEBREN_11522 [Caenorhabditis brenneri]
Length = 922
Score = 298 bits (764), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 286/554 (51%), Gaps = 83/554 (14%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
+ + DP + LR HQ+EG++F+FE L + +G G ILADDMGLGK++Q++A +
Sbjct: 231 IAVVADPRFAKQLRDHQKEGIRFIFE---RLKSDSG--GAILADDMGLGKSIQTMAATWA 285
Query: 232 LLCQGFDGKPMVKKA-IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
LL P + + +I+ P+SLV+NW+AE +KW + ++ +D I S+
Sbjct: 286 LLRGSKAPSPQIANSCLIIVPSSLVNNWKAEFEKWWRLMRFPAVMAQTAKD-----ISSY 340
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-----DQTLTN------ 339
+ L++SY+ + H K D+++CDE H+LKN +TL +
Sbjct: 341 QSTVKQMPYLVISYDMAQRHVEKLRMIH-FDIIVCDEGHKLKNLDGKLRRTLLSLEIPRR 399
Query: 340 --------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
+ND +EF+++++F P G A FR+ +C P
Sbjct: 400 LILTGTPMQNDFDEFYSLLDFVRPNEFGTLAEFRK------MCNDNP------------- 440
Query: 392 SSELSAKVNQFILRRTNALLS-NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
+L+ ++ +LRRT A ++ HLP K ++ C + +Q +++
Sbjct: 441 -EQLNELIDDCMLRRTAADVNLTHLPEKHEYILFCAASQIQQNIHSEIC----------- 488
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKSGN--PGTTGFEDCIRFFPPEMFSGRSGSWT 508
+ L+ I ++L NHPKL+ D ++ N PG+ + S
Sbjct: 489 DYMTGDALSLIFFARQLANHPKLLLDNLREKNDKPGSKSLKQ---------IQKHSALLL 539
Query: 509 GGDG-----AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
DG V+ SGK+ L +L R + V+VSNY +TLD+ QLC +
Sbjct: 540 AFDGLNMPRGGVKESGKLIALVEMLKCFRG-LQECAVIVSNYIETLDMIEQLCEYLDFKV 598
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
RLDG T + RQKLV HFND +FLLS+KAGG GLNLIG +RLVLFD DWNPAND
Sbjct: 599 FRLDGKTQVQDRQKLVKHFNDQRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPAND 658
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
+QA AR+WRDGQ + IYR ++TGTIEEK+ QRQ+ K GL VI + S +
Sbjct: 659 QQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGLGCVIDAIEVGESVST---F 715
Query: 684 STEDLRDLFTFHDD 697
+ E+L+D+FTF D
Sbjct: 716 TDEELKDIFTFTGD 729
>gi|392902167|ref|NP_001255914.1| Protein Y116A8C.13, isoform b [Caenorhabditis elegans]
gi|290457487|emb|CBK19482.1| Protein Y116A8C.13, isoform b [Caenorhabditis elegans]
Length = 720
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 198/569 (34%), Positives = 294/569 (51%), Gaps = 74/569 (13%)
Query: 148 TLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVS-GLLNAA 206
T+ + P +L E+ D +TVD R LRPHQ+ G+QF+F+ + G
Sbjct: 59 TIQEKIPPFIL--NEQDILDRKTTSAVTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNG 116
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 266
G G ILADDMGLGK+LQ++A + LL + + +I+ P+SLV+NW+AE KW
Sbjct: 117 GGGGAILADDMGLGKSLQTMAATWALLKGSKTAQQLANSCLIIVPSSLVNNWKAEFDKW- 175
Query: 267 GGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICD 326
++ A+ T +D I ++ + L++SY+ + H K D+++CD
Sbjct: 176 WRLMRFPAVIALTAND----ITTYQSTIKLMPYLVISYDLAQRHVEKLKIIRF-DVMVCD 230
Query: 327 EAHRLKN-----DQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRY 367
E H+LKN +TL + +ND EEF+++++F P + G FR
Sbjct: 231 EGHKLKNLDGKLRKTLLSLEIPRRLILTGTPMQNDFEEFYSLLDFVRPSVFGSIVEFR-- 288
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLS-NHLPPKIIEVVCCK 426
K+ +R +L+ +++ +LRRT A + HLP K ++ C
Sbjct: 289 ------------------KMCSDRPEQLNELIDECMLRRTAADVDLKHLPEKHEYILFCA 330
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+P+Q +++ + L+ I ++L NHPKL+ D ++ +
Sbjct: 331 ASPIQKHVHSEIC-----------DYMTGDALSLIFFARQLANHPKLLLDNLREKTEKSK 379
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
+ P + + G V+ SGK+ L ++ R + V+VSNY
Sbjct: 380 AHKHS-----PLLLAFDGAHMPRGG---VKESGKLTALVDMIKCFRL-LQECTVIVSNYI 430
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
+TLD+ QLC + LRLDG T + RQKLV FND +FLLS+KAGG GLNLI
Sbjct: 431 ETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLI 490
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
G +RLVLFD DWNPAND+QA AR+WRDGQ + IYR ++TGTIEEK+ QRQ+ K GL
Sbjct: 491 GASRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGLGC 550
Query: 667 VIQQ-EQTDSSATQGNFLSTEDLRDLFTF 694
VI E D+ AT + EDL+D+FTF
Sbjct: 551 VIDAIEVGDTIAT----FTDEDLKDIFTF 575
>gi|324505729|gb|ADY42457.1| DNA repair and recombination protein RAD54B [Ascaris suum]
Length = 746
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 277/520 (53%), Gaps = 74/520 (14%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ +D L R LRPHQ+EG+ F+F L + G G ILAD+MGLGK++Q+I+LL+ LL
Sbjct: 222 VVLDGPLARHLRPHQKEGLTFLFR---RLKDPGG--GVILADEMGLGKSVQAISLLWILL 276
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDP 293
Q K I++ PTSL+ NW E KW+ QL+ T S + F
Sbjct: 277 KQLKQKGATSMKFILIAPTSLIGNWRCEFNKWLPHSEQLLFPVTKT-----SEVRKFMAY 331
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSE-----SCDLLICDEAHRLKN-----DQTLTN---- 339
VL++SY+ C+E S L+ICDEAHRLKN Q+++
Sbjct: 332 SGYSPVLLISYDVV------VRCAELLEKISFALMICDEAHRLKNFNGNLRQSVSRLRTE 385
Query: 340 ----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
+ND+ EFF++++ P G A FR A E+ G+
Sbjct: 386 RRLLLTGTPIQNDMSEFFSLLDLAKPAAFGSLAQFRSM-----------MANED----GM 430
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS 449
++ +++ +LRRT + N+LPP+ V+ C+L+ +Q +YN I
Sbjct: 431 H---DIQLLLSEILLRRTADVNFNNLPPRHEYVLWCRLSKVQQLIYNRII---------- 477
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
S LA I L+KLCNHP ++Y ++ S + F C + S+
Sbjct: 478 -GLASSDHLAIIDMLRKLCNHPSILYQSLTSKH---GAFNSCESTLNATVLRAFPSSFEP 533
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
V+ SGK+ V +++ LR+ T++++V+VSN+T+TLD+ +++C+ RLDG+
Sbjct: 534 NCSTIVD-SGKLSVFVKMMVSLRE-TNEKVVVVSNFTKTLDMLSEVCKGIFCTVTRLDGS 591
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
+R +LV+ FN S VFLLS+KAGG GLNLIG +RLVLFD DWNPA D QA AR
Sbjct: 592 VVPHRRMQLVDEFNTSSLPNHVFLLSTKAGGVGLNLIGASRLVLFDSDWNPAFDVQAMAR 651
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ 669
+WRDGQK IYR ++ GTI+EK+ QRQ+ K GL V++
Sbjct: 652 IWRDGQKMPCHIYRLVTAGTIDEKILQRQVMKSGLGTVVE 691
>gi|219128189|ref|XP_002184301.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404102|gb|EEC44050.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 975
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 211/606 (34%), Positives = 293/606 (48%), Gaps = 109/606 (17%)
Query: 164 PQNDGGNLVPITVDPLLVR-FLRPHQREGVQFMFECVSGLLNAAG--------IHGCILA 214
P NL+ P VR LRPHQ EGV+F+++ ++ + + G ILA
Sbjct: 295 PPQSSTNLLANVPLPASVRSVLRPHQEEGVEFLWQALAPMAVSGNEQNDTQSPARGAILA 354
Query: 215 DDMGLGKTLQSIALLY------------------TLLCQGFDGKPMVKKAIIVTPTSLVS 256
D+MGLGKTL +IA++ LLC G ++ I+V P+SLV+
Sbjct: 355 DEMGLGKTLMTIAIIAGLHRRQRDKTTPLSVKPSQLLCFG-----SFQQFIVVCPSSLVT 409
Query: 257 NWEAEIKKWVGGRVQ-LIALCESTRDDVVSGIDSFTDPCSSL-----------QVLIVSY 304
NW E KW+G Q + + ++ V+ + ++ C+ + QVLIVSY
Sbjct: 410 NWAREFDKWIGRASQPKRVVIQKGGEEGVAAMRAY---CAGMLKKKKQLQKIGQVLIVSY 466
Query: 305 ETFRMHSSKFSCSESCDLLICDEAHRLKNDQ---TLTN-----------------RNDLE 344
+ R + + LL+ DE HRLKN TLT +N+L
Sbjct: 467 DLLRRQVEHLQDACAFGLLVVDEGHRLKNTSGSLTLTALESLTADARLCITATPMQNNLS 526
Query: 345 EFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFIL 404
EF+ +VNF P +LG FR ++ I AT + ERSS L FIL
Sbjct: 527 EFYNLVNFVRPDVLGSLNEFRDSFDRPISAANHKHATPSQIATSRERSSALETLTKPFIL 586
Query: 405 RRTNA-LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
RR A +L + LPP++ ++ C+ + Q LY+ + T K L T
Sbjct: 587 RRLQADVLKSMLPPRVETLLFCRPSETQRALYHQLTARISGGSCTDGGTDALKTL---TT 643
Query: 464 LKKLCNHPKLIYD-TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K+C HP + D +K N G C+++ + LSGKM
Sbjct: 644 LRKICTHPSICNDDNVKPWNRPEKG--PCLKYD-------------------IALSGKMT 682
Query: 523 VLARLLGHLRQRT-DDRIVLVSNYTQTLDLFAQLCR-ERRYPYLRLDGTTSISKRQKLVN 580
VL +LL +R+ +D+IV+VSNYT L + L R+ +LRLDG T S+RQ LV
Sbjct: 683 VLDKLLQSIRENAPNDKIVVVSNYTSALTIVESLILGPRKLGFLRLDGGTESSQRQPLVE 742
Query: 581 HFN--DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
FN P K F LLSSKAGGCGLNL+G NRL+L DPDWNPA+D QA RV+R GQ K
Sbjct: 743 SFNRSHPEK-VFCLLLSSKAGGCGLNLVGANRLLLLDPDWNPASDVQAMGRVYRQGQTKP 801
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQ-------KVIQQEQTDSSATQGNFLSTEDLRDL 691
+IYR +TGT+EE + QRQ+ K L K +Q +DS A S E+L
Sbjct: 802 CWIYRLFTTGTVEEVILQRQLQKGNLTAWTVDGGKSSRQNSSDSRAK----FSKEELTAA 857
Query: 692 FTFHDD 697
FT D+
Sbjct: 858 FTLKDE 863
>gi|115679178|ref|XP_790055.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Strongylocentrotus purpuratus]
Length = 335
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/295 (50%), Positives = 192/295 (65%), Gaps = 21/295 (7%)
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
+VVCC+LT +QS +Y ++ + + + + K S L+ IT LKKLCNHP L+YD S
Sbjct: 2 QVVCCRLTSMQSCIYQQYVKAMMKECRMKTQGKVS-TLSAITHLKKLCNHPALVYDKCVS 60
Query: 481 GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV--ELSGKMHVLARLLGHLRQRTDDR 538
G F D ++ FPP G + + ELSGKM VL +L + + D+
Sbjct: 61 SKDG---FHDMLQNFPP-----------GYNNKQLRPELSGKMQVLDYILAITKTSSSDK 106
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKA 598
+VLVSNYTQTLD+F QLCR R Y ++RLDG+ SI KR K+V+ FN+P+ EF+F+LSSKA
Sbjct: 107 VVLVSNYTQTLDVFEQLCRLRGYLFVRLDGSMSIKKRAKVVDSFNNPNSPEFIFMLSSKA 166
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKKR FIYR L+TGTIEEK++QRQ
Sbjct: 167 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKRCFIYRLLATGTIEEKIFQRQ 226
Query: 659 MSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQN 713
K+ L + + D S ++L+DLF F + S+ H+ C RC N
Sbjct: 227 AHKKALSSCVVDNEEDVE----RHFSVDELKDLFRFKEGTLSDTHDKFKCNRCIN 277
>gi|300175571|emb|CBK20882.2| unnamed protein product [Blastocystis hominis]
Length = 571
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 271/530 (51%), Gaps = 75/530 (14%)
Query: 217 MGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAE-IKKWVG-GRVQLIA 274
MGLGKTL +I+L++T L Q KP++ A++ P+SLV NW AE I+KW+G R++ I
Sbjct: 1 MGLGKTLTAISLIFTSLTQSPWSKPLISSAVVTCPSSLVDNWGAEFIRKWIGRDRIRCIV 60
Query: 275 LCES-------TRDDVV-SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSC---------S 317
L E RD V+ SG++ VL+VSYE + S F
Sbjct: 61 LKEKGSKAEEKIRDFVMQSGLNRV--------VLVVSYEVRLLFSPSFKMYRKYADAING 112
Query: 318 ESCDLLICDEAHRLKN---DQTLTN-----------------RNDLE----------EFF 347
LL+CDE HRLK+ + T+ + +NDLE E F
Sbjct: 113 SKAGLLVCDEGHRLKSSTGNATIDSLLQFPSRRRVLLSGTPIQNDLEVGVDRPPNQQELF 172
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
A+ F NPG+ A FR+ + I GR ++ ++ L RS+ELS +QFILRRT
Sbjct: 173 ALSEFVNPGVFSSLASFRQLFVRPIEAGRRKGCSDADRDLAAMRSAELSRITDQFILRRT 232
Query: 408 NA-LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKK 466
A +L LPPKI + L Q +LY I + A L ++ AL+
Sbjct: 233 TASILRASLPPKITHYLFTPLASKQRQLYEKLIELQRGSLAEHGGDAGQLTLTFLHALRL 292
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLAR 526
LC HP LI ++++S T+ + + + R + S KM +
Sbjct: 293 LCVHPSLIRESVQS----TSALSSLLPILDADDQNQRD---------FTSQSVKMEAVEL 339
Query: 527 LLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
LL + TD++I+++S+YTQ LD C +++ Y RLDG T +++RQ LVN FN
Sbjct: 340 LLASILSHTDEQILVISSYTQILDYLGSFCDSKKWGYFRLDGQTDVAQRQSLVNSFNHRY 399
Query: 587 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 646
++ +F+LS++AGG GLN+ G +R+V+ +P WNPA D Q+ AR WR GQ +RVF+YR
Sbjct: 400 TSKRLFILSARAGGVGLNITGASRVVMLEPAWNPAIDLQSIARAWRFGQTRRVFVYRLFV 459
Query: 647 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
G+IEE + QRQ+ L+K I D +A L E++R++F +
Sbjct: 460 AGSIEEVMLQRQL----LKKAIADVAVDHTAMGEGKLDREEMREVFRLKE 505
>gi|403417670|emb|CCM04370.1| predicted protein [Fibroporia radiculosa]
Length = 544
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/391 (40%), Positives = 229/391 (58%), Gaps = 26/391 (6%)
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+NDL EF AM +F NPG+L D FR+ YET I+ R P ++ +E +LG RS++LSA
Sbjct: 19 QNDLGEFHAMADFCNPGLLDDYNIFRKVYETPILKSRAPGSSAKETELGEARSAQLSAIA 78
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
F+LRR +L +LPPK VV T +Q ++N + + + + T +S LA
Sbjct: 79 RSFVLRRDATILKKYLPPKHEYVVFVTPTKVQLSIFNKILTADRLDNLVRNSTAES--LA 136
Query: 460 YITALKKLCNHPKLIYDTI-KSGNPGTTG--------FEDCIRFFPPEMFSGRSGSWTGG 510
I L K+ N P L+ T+ ++ N G E+ ++ P R
Sbjct: 137 LINMLTKISNSPILLKATLDQAKNRADQGGDVIKKNAIEEALKLLPER---ARVDD---- 189
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
V LSGK+ LA LL L + TD++ ++VS+YT TL+L C+++ Y Y RLDG T
Sbjct: 190 ----VTLSGKLTALAHLLRALHKHTDEKCIIVSHYTSTLNLVEAFCKKQAYTYHRLDGQT 245
Query: 571 SISKRQKLVNHFNDPSK-NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
KRQ+ VN FN ++ F+FLLSSKAGG GLNLIG +RL L D DWNP++D Q+ AR
Sbjct: 246 PAPKRQEYVNEFNKSNQAKRFIFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMAR 305
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
+ RDGQK+ VFIYRFL+ GTI+EK+YQRQ++K GL + + SA++ + + +DL+
Sbjct: 306 IHRDGQKRPVFIYRFLTAGTIDEKIYQRQVTKLGLSNSLMGD--GPSASKSDSFTRKDLQ 363
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
D+FT H H+ + C C++ DGA +
Sbjct: 364 DIFTIHPHTACHTHDLLECP-CESTGDGAAT 393
>gi|440640145|gb|ELR10064.1| hypothetical protein GMDG_04465 [Geomyces destructans 20631-21]
Length = 554
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 236/440 (53%), Gaps = 41/440 (9%)
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND-----------QTLTN---- 339
+S VLIV YE R + + DL+I DE HRLK + TL
Sbjct: 16 ASYSVLIVGYERMRGIAEELGQGAGVDLVIVDEGHRLKKETNKAAQAIKGLSTLKKIILS 75
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+NDL EFF MV+F NP + A+ F++ +ET I+ R+P A+E E++LG R +EL
Sbjct: 76 GTPLQNDLTEFFVMVDFLNPDLFKSASSFKKNFETPILRSRQPNASERERELGEARQAEL 135
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAIS-EETKQ 454
S QFILRRT + ++ LP K VV CK T Q+++Y + S A + + Q
Sbjct: 136 SEMTQQFILRRTAEVQAHFLPQKTEFVVFCKPTTAQAQIYEEILESPAFMGARNGYKAAQ 195
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTG--FEDCIRFFPPEMFSGRSGSWTGGDG 512
++ L I L+K+CN P+L+ + K G ED + E
Sbjct: 196 AQALGLINILRKVCNSPQLLLPSSKKSAAKRVGEDAEDAVEGISEERLKA---------- 245
Query: 513 AWVELSGKMHVLARLLGHLRQ---RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
+ S KM VL LL + + T +++V+VSN+T TLDL + + P LRLDG
Sbjct: 246 PLLATSTKMRVLDGLLKAIAEDPHNTKEKVVIVSNFTATLDLLQKHLAQLSLPLLRLDGD 305
Query: 570 TSISKRQKLVNHFNDPS-KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
T ++RQ +VN FN S + F LLS+KAGG GLNL+G +RL+LFD DWNPA D QA A
Sbjct: 306 TPTNRRQDIVNEFNKTSARKNFALLLSAKAGGVGLNLVGASRLILFDVDWNPATDLQAMA 365
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
RV R GQ+K FIYR L G ++EK+YQRQ++K+GL I + + G S ++L
Sbjct: 366 RVHRPGQEKPTFIYRLLMAGGMDEKIYQRQLTKKGLADSIVDNKKN-----GAVFSADEL 420
Query: 689 RDLFTFHDDVRSEIHENMHC 708
RDLFT + H+ + C
Sbjct: 421 RDLFTLDTTSDCKTHDLLGC 440
>gi|339250730|ref|XP_003374350.1| DNA repair protein Rhp54 [Trichinella spiralis]
gi|316969354|gb|EFV53467.1| DNA repair protein Rhp54 [Trichinella spiralis]
Length = 328
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 192/307 (62%), Gaps = 25/307 (8%)
Query: 430 LQSELYNHFIHSKNVKRAISEETKQ---SKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+Q +LY F++SK + + + SK LA IT LKKLCNHP LIY+ T
Sbjct: 1 MQMKLYERFLNSKTMASQLRDACTGNMPSKALALITNLKKLCNHPALIYEKCIEK---TD 57
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
GFE+C FPP ++ E SGKM VL LL +++ TDD++VLVSNYT
Sbjct: 58 GFENCSDLFPP--------GFSVKKQIRPEWSGKMRVLDGLLAYVKANTDDKVVLVSNYT 109
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDP--SKNEFVFLLSSKAGGCGLN 604
QTLDLF QLC R Y ++RLDG+ + KR K+V FNDP + FVF+LSSKAGGCGLN
Sbjct: 110 QTLDLFEQLCILRNYGFVRLDGSMTKKKRAKIVADFNDPQVGNSTFVFMLSSKAGGCGLN 169
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
LIG NRLV+FDPDWNPAND QA ARVWRDGQKK FIYR L+TG+IEEK++QRQ K+ L
Sbjct: 170 LIGANRLVMFDPDWNPANDGQAMARVWRDGQKKICFIYRLLATGSIEEKIFQRQTHKKAL 229
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIG-- 722
+ D+ + S++ L+DLF D S+ H+++ C RC G ESI
Sbjct: 230 SSCV----VDNEENLASLFSSDQLKDLFRMKSDTISDTHDSLKCKRCIG---GVESISPP 282
Query: 723 EGDETNS 729
E +TNS
Sbjct: 283 EDADTNS 289
>gi|156082193|ref|XP_001608585.1| DNA repair protein rhp54 [Plasmodium vivax Sal-1]
gi|148801524|gb|EDL42923.1| DNA repair protein rhp54, putative [Plasmodium vivax]
Length = 1064
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 244/433 (56%), Gaps = 38/433 (8%)
Query: 62 RGNLVVKRQSLLPRVLSVTEGAAVCR-KPFKPPCSNGYDNGNDQLARRLCARKRFVPWGS 120
R + + R +LLP +LS+ + PFK P + + + L A+ R W +
Sbjct: 18 RACITLVRATLLP-ILSIDKNEKTTLFHPFKSPLPGFVSDRRLYVQKTLGAKVRRTGWLN 76
Query: 121 SRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLL 180
+ +I R D E N +E + PL+L++ E + + VDP+L
Sbjct: 77 L--MKNSIPRRSDEAEASEQNKADE---IKNEFVPLILYESENSK--------VEVDPIL 123
Query: 181 VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK 240
+FLR HQREGV F+FEC+ L + I GCILADDMGLGKTLQSI++LYTLL QG D K
Sbjct: 124 AQFLREHQREGVTFVFECLMNLRDDR-ISGCILADDMGLGKTLQSISVLYTLLKQGIDKK 182
Query: 241 PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
P V++ +I+ P SL++NW EI KW+ GR + + ++ ++ +VS ++ F S V+
Sbjct: 183 PAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKIVSKLEGFKYDQKS-TVI 241
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------RN 341
I SYE FR+++ S S D++ICDEAHRLKND+T T +N
Sbjct: 242 ICSYECFRINNDSLDKS-SIDMIICDEAHRLKNDKTKTYMSIYKLAARKRLLLSGTPIQN 300
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
DL EFFA+++ NP + D FR+ Y I+ GR+ ATE+E+++ ER +ELS N+
Sbjct: 301 DLSEFFALISLCNPDLFDDTNSFRKKYANPILIGRDKDATEKEQEVASERLAELSTITNK 360
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
FILRRTN LLS LP K + + KL P+Q LY F+ K + + + T + +L I
Sbjct: 361 FILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLFLKDKRILKN-EQSTNKVNVLINI 419
Query: 462 TALKKLCNHPKLI 474
L+K+CNHP L+
Sbjct: 420 KKLEKICNHPLLL 432
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 162/279 (58%), Gaps = 48/279 (17%)
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
+ +S K +L LL ++Q T D++V+VSNYTQTLD LC+E Y ++RLDG SI
Sbjct: 522 YYNMSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCKENFYKFVRLDGGISIK 581
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
KR K+++ F S + F+FLLSSK+GGCG+NLI NRL+L DPDWNPANDKQA ARVWR+
Sbjct: 582 KRHKVISDFTHSS-DIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWRE 640
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF----LSTEDLR 689
GQKK +IYR TGTI+EKVYQRQ+SK+GL +I T NF LS E+++
Sbjct: 641 GQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMI--------VTNTNFSKDQLSDENVK 692
Query: 690 DLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
LF + + E H+N+ CTRC + +++EV +
Sbjct: 693 KLFNYKMNTLCETHDNIECTRC-------------------TIRNSTEKEVENFS----- 728
Query: 750 AGCLHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAIL 788
+QL EED+N W HH SVPD IL
Sbjct: 729 -----------EQLEDFEEEDVNTWAHHQNVESVPDEIL 756
>gi|344238474|gb|EGV94577.1| DNA repair and recombination protein RAD54-like [Cricetulus
griseus]
Length = 306
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/250 (56%), Positives = 167/250 (66%), Gaps = 16/250 (6%)
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
LKKLCNHP LIYD SG GFED + FPP S +LSGKM V
Sbjct: 12 LKKLCNHPALIYDKCVSGE---DGFEDTLDIFPPGYTS---------KAVEPQLSGKMLV 59
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +L R R+ D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN
Sbjct: 60 LDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFN 119
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
PS +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR
Sbjct: 120 SPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYR 179
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
LS GTIEEK++QRQ K+ L + E+ D S +L++LFT + S+ H
Sbjct: 180 LLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELKELFTLDEASLSDTH 235
Query: 704 ENMHCTRCQN 713
+ +HC RC N
Sbjct: 236 DRLHCRRCVN 245
>gi|389582103|dbj|GAB64503.1| DNA repair protein rhp54, partial [Plasmodium cynomolgi strain B]
Length = 712
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 248/436 (56%), Gaps = 42/436 (9%)
Query: 62 RGNLVVKRQSLLPRVLSVTEG---AAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPW 118
R + + R +LLP +LS+ + PFK P + N + + L A+ R W
Sbjct: 18 RTCITLVRATLLP-ILSIDKNEKTKTTLFHPFKSPLPGFVSDKNLYVQKTLGAKVRRTGW 76
Query: 119 -GSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVD 177
++ + ++ ++ + N I+ F PL+L++ E+ + + VD
Sbjct: 77 INLTKNSIPRRSDETEINEQKKENEIKNEFI------PLILYEDEKNK--------VEVD 122
Query: 178 PLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGF 237
P+L +FLR HQREGV F+FEC+ L + I GCILADDMGLGKTLQSI++LYTLL QG
Sbjct: 123 PILAQFLREHQREGVTFVFECLMNLRDDK-ISGCILADDMGLGKTLQSISVLYTLLKQGI 181
Query: 238 DGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL 297
D KP V++ +I+ P SL++NW EI KW+ GR + + ++ ++ +VS ++ F S
Sbjct: 182 DKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKIVSKLEGFKYDQKS- 240
Query: 298 QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT--------LTNR--------- 340
V+I SYE FR+++ S + D++ICDEAHRLKND+T LT R
Sbjct: 241 TVIICSYECFRINNESLDKS-TIDMIICDEAHRLKNDKTKTYMSIYKLTARKRLLLSGTP 299
Query: 341 --NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
NDL EFFA+++ NP + D FR+ Y I+ GR+ ATE+E+++ ER +ELS
Sbjct: 300 IQNDLSEFFALISLCNPDLFDDTNLFRKKYANPILIGRDKDATEKEQEIASERLAELSTI 359
Query: 399 VNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKIL 458
N+FILRRTN LLS LP K + + KL P+Q LY F+ K + + + T + +L
Sbjct: 360 TNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQESLYVLFLKDKKILKN-EQSTNKVNVL 418
Query: 459 AYITALKKLCNHPKLI 474
I L+K+CNHP L+
Sbjct: 419 INIKKLEKICNHPLLL 434
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 117/156 (75%), Gaps = 1/156 (0%)
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
++ +S K +L LL ++Q T D++V+VSNYTQTLD LC+E Y ++RLDG SI
Sbjct: 543 SYYHMSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCKENFYKFVRLDGGISI 602
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR K++N F S + F+FLLSSK+GGCG+NLI NRL+L DPDWNPANDKQA ARVWR
Sbjct: 603 KKRHKVINDFTHSS-DIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWR 661
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+GQKK +IYR TGTI+EKVYQRQ+SK+GL +I
Sbjct: 662 EGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMI 697
>gi|221052138|ref|XP_002257645.1| DNA repair protein rad54 [Plasmodium knowlesi strain H]
gi|193807475|emb|CAQ37981.1| DNA repair protein rad54, putative [Plasmodium knowlesi strain H]
Length = 1052
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 265/493 (53%), Gaps = 55/493 (11%)
Query: 58 DALVRGNLVVKRQSLLPRVLSVTEG-AAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFV 116
D+ R + + R +LLP +LS+ + PFK P + + + + L A+ R
Sbjct: 14 DSPERTCITLVRATLLP-ILSIDKNEKTTLFHPFKNPLPGFVSDKSLYVKKTLGAKVRRT 72
Query: 117 PWGSSRPVLVTITNRLDLPRTVEN-NVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPIT 175
W + +TN + PR E E+ PL+L++ E + I
Sbjct: 73 GW-------INLTNCI--PRRSEGAEPDEQKENEIKDFVPLILYEDENNK--------IE 115
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
VDP+L +FLR HQREGV F+FEC+ L + I GCILADDMGLGKTLQSI++LYTLL Q
Sbjct: 116 VDPILAQFLREHQREGVTFVFECLMNLRDEK-ISGCILADDMGLGKTLQSISVLYTLLKQ 174
Query: 236 GFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCS 295
G + KP V++ +I+ P SL++NW EI KW+ GR + + ++ ++ ++S ++ F
Sbjct: 175 GINKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKILSKLEGFKYDYK 234
Query: 296 SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---------------- 339
S V+I SYE FR+++ S S D++ICDEAHRLKND+T T
Sbjct: 235 S-TVIICSYECFRINNESLDKS-SIDMIICDEAHRLKNDKTKTYMSIYNLSARKRLLLSG 292
Query: 340 ---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
+NDL EFFA+++ NP + D FR+ Y I+ GR+ ATE+E+++ ER +ELS
Sbjct: 293 TPIQNDLSEFFALISLCNPDLFDDTILFRKKYANPILIGRDKDATEKEQQIASERLAELS 352
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK 456
N+FILRRTN LLS LP K + + KL P+Q LY F+ K + + + T +
Sbjct: 353 TITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYMLFLKDKRILKN-DQSTNRVN 411
Query: 457 ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM----------FSGRSGS 506
+L I L+K+CNHP L+ + + G F I E+ + RSG
Sbjct: 412 VLINIKKLEKICNHP-LLLNANDIKDVGQVSFAKLIEEAAKELEKKPERGAKRANARSGG 470
Query: 507 WT-GGDGAWVELS 518
+ GG GA +LS
Sbjct: 471 TSPGGAGAAGKLS 483
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 167/276 (60%), Gaps = 40/276 (14%)
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
++ +S K +L LL ++Q T D++V+VSNYTQTLD LCRE Y ++RLDG +I
Sbjct: 538 SYYNMSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCRENSYKFVRLDGGINI 597
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR K++N F S + F+FLLSSK+GGCG+NLI NRLVL DPDWNPANDKQA ARVWR
Sbjct: 598 KKRHKVINDFTH-SNDIFIFLLSSKSGGCGINLISSNRLVLLDPDWNPANDKQALARVWR 656
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
+GQKK +IYRF TGTI+EKVYQRQ+SK+GL +I T+++ + LS E+++ LF
Sbjct: 657 EGQKKICYIYRFFCTGTIDEKVYQRQISKDGLSSMI---VTNTNLCKDQ-LSDENVKKLF 712
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
+ + E H+N+ CTRC +I E N N ++Q
Sbjct: 713 NYRMNTLCETHDNIECTRC--------TIKNCTEKNEENFSEQ----------------- 747
Query: 753 LHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAIL 788
L+ E EED+N W HH +VPD IL
Sbjct: 748 ---LEDFE-------EEDVNTWAHHQSVETVPDEIL 773
>gi|70951871|ref|XP_745142.1| DNA repair protein rad54 [Plasmodium chabaudi chabaudi]
gi|56525372|emb|CAH78699.1| DNA repair protein rad54, putative [Plasmodium chabaudi chabaudi]
Length = 1032
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 256/451 (56%), Gaps = 52/451 (11%)
Query: 49 DEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEG-AAVCRKPFKPPCSNGYDNGNDQLAR 107
DE +S N D R + + R +LLP +LS+ + PF+ P N + L +
Sbjct: 14 DEADESNNGD---RKCITLVRATLLP-ILSIGKNEKTTLFTPFRNPLPGFVSNKSLYLKK 69
Query: 108 RLCARKRFVPWGSSRPVLVTITNRLDLPRTV-----ENNVIEENFTLPPGVDPLVLWQPE 162
L A+ R W + + N +PR EN+ +EE + DPLVL++ E
Sbjct: 70 TLGAKVRKTGW------INLMKN--SIPRRSDETGDENDKVEE---IIRKFDPLVLYEDE 118
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
+ I VDP+L ++LR HQREGVQF+FEC+ L + I GCILADDMGLGKT
Sbjct: 119 NSK--------IEVDPILAQYLREHQREGVQFVFECLMNLKDEK-ISGCILADDMGLGKT 169
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
LQSI++LYTLL QG++ KP V++ +I+ P SL++NW EI KW+ R + + ++ ++
Sbjct: 170 LQSISVLYTLLKQGYNKKPAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDNAKEK 229
Query: 283 VVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
+VS ++ F S +LI SYE FR+++ S + D++ICDEAHRLKND+T T
Sbjct: 230 IVSKLEGFKYDLKS-TILICSYECFRINNESIDKS-AIDMIICDEAHRLKNDKTKTYTSI 287
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+NDL EFFA+++ NP + D FR+ + I+ GR+ ATE+
Sbjct: 288 YKLSAKKRLLLSGTPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEK 347
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
E+++ ER +ELS N+FILRRTN LLS LP K + + KL P+Q LY F+ K
Sbjct: 348 EQQIASERLAELSTITNKFILRRTNNLLSKVLPVKYLINIFVKLNPIQEALYVLFLKDKK 407
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLI 474
+ ++ + K + +L I L+K+CNHP L+
Sbjct: 408 LLKSDNSNNKVN-VLINIKKLEKICNHPLLL 437
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 165/286 (57%), Gaps = 44/286 (15%)
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
+ LS K +L LL ++Q T+D++V+VSNYTQTLD LC+E Y ++RLDG SI
Sbjct: 532 CYYNLSSKFQLLHFLLKTIKQDTNDKVVIVSNYTQTLDYMEILCKENHYKFVRLDGGISI 591
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR K+++ F + + + F+FLLSSK+GGCG+NLI NRL+L DPDWNPANDKQA ARVWR
Sbjct: 592 KKRHKVISDFTN-TDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWR 650
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
+GQKK +IYR TGTI+EKVYQRQ+SK+GL +I T+ S Q LS E+++ LF
Sbjct: 651 EGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVT-NTNLSKDQ---LSDENVKKLF 706
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
+ + E H+N+ C RC N+ D E E
Sbjct: 707 NYKQNTICETHDNIECNRC-NFKDNTEVYSE----------------------------- 736
Query: 753 LHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTF 798
QL EED+N W HH +VPDAIL + + +
Sbjct: 737 ---------QLEDFEEEDVNTWAHHLNIDTVPDAILIKAVKEATEY 773
>gi|452822792|gb|EME29808.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 924
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 284/574 (49%), Gaps = 93/574 (16%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DGG +P + L P+Q+ GVQ+++E L+ G+ G I+ D+MGLGKT+Q I
Sbjct: 185 DGGLRLPADIYDRLF----PYQQVGVQWLWE-----LHCQGVGG-IVGDEMGLGKTIQVI 234
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV-GGRVQLIALCESTRDDVVS 285
LL +L P+ IV P +L+S W+ E W RV+++ D +
Sbjct: 235 VLLASLSYSHLLPGPVC----IVAPATLLSQWKREFATWWPSFRVRIMHKSAGDGDLWI- 289
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN----- 339
D +L+ SYE R ++ D +I DE HR++N D +T
Sbjct: 290 ----VEDIIEQGDILVTSYEQVR-RFHEYILVHKWDYVILDEGHRIRNPDAEITLVCKRF 344
Query: 340 -------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
+N L+E +++ +F PG LG F + I G AT +
Sbjct: 345 KTVHRIIMTGAPLQNRLKELWSLFDFVYPGKLGTLPVFEEQFSVPITLGSYLNATPLQVH 404
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ +S L V+ ++LRR ++ LP K +++ CKLT Q ELY +++S+ +++
Sbjct: 405 TAYKCASVLRNLVSPYLLRRLKKDVALQLPKKQEQILFCKLTKEQRELYKKYLNSRELQK 464
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ +L ++ L+K+CNHP L YD ED R+ G
Sbjct: 465 VLQGSVN---MLTAVSVLRKICNHPDL-YDE--------NALEDDRRY----------GE 502
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
WT +GK+ VL ++L + D R+++ S LD+ R+RRY YLR+
Sbjct: 503 WTR--------AGKLVVLDQVLLSW-SKDDSRVLIFSQSRAMLDILEMFARQRRYTYLRM 553
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG T++ +R KL++ FN + F+FLL++K GG G+NL G NR+VL+DPDWNP+ D QA
Sbjct: 554 DGETAMQERMKLIDSFNQDDEV-FLFLLTTKVGGLGINLTGANRVVLYDPDWNPSTDLQA 612
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
R WR GQK+ V IYR +++GTIEEK+Y RQ+ K+ L + ++ A Q F +
Sbjct: 613 RERAWRIGQKRDVIIYRLVTSGTIEEKIYHRQIFKQLLTNKVLKD-----AQQTRFFRPK 667
Query: 687 DLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAES 720
DL DLFT D+ Y+DG E+
Sbjct: 668 DLFDLFTLGDE----------------YEDGTET 685
>gi|124512694|ref|XP_001349480.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7]
gi|23499249|emb|CAD51329.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7]
Length = 1239
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 250/446 (56%), Gaps = 41/446 (9%)
Query: 49 DEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCR-KPFKPPCSNGYDNGNDQLAR 107
DE +++NV+ R ++ + R +LLP +LS+ + PFK P + L +
Sbjct: 14 DEYEENENVNG-ERTSITLVRATLLP-ILSIGKNEKTTLFHPFKNPLPGFVSDKTLYLKK 71
Query: 108 RLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQND 167
L + R W + + + + VI+++ +PL+L++ E +
Sbjct: 72 TLGVKVRRTGWINLMKNSIPRRSDETEEQEKIEEVIKKH-------EPLILYKDENDK-- 122
Query: 168 GGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
I VDP+L ++LR HQREGVQF+FEC+ + + I GCILADDMGLGKTLQSI
Sbjct: 123 ------IEVDPILAQYLREHQREGVQFVFECLMNIKDDK-ISGCILADDMGLGKTLQSIT 175
Query: 228 LLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
+LYTLL QGF K V++ +I+ P SL++NW EI KW+ R + + ++ ++ +VS +
Sbjct: 176 VLYTLLKQGFHKKCAVRRCLILCPASLINNWNDEISKWIPNRCNVTCVNDNAKEKIVSKL 235
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
+ F S VLI SYE FR++ ++F S D++ICDEAHRLKND+T T
Sbjct: 236 EGFKYDIQS-TVLICSYECFRIN-NEFLDKSSIDMIICDEAHRLKNDKTKTYTSIYNLTA 293
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+NDL EF+A+++ NP + D FR+ + I+ GR+ ATE+E+++
Sbjct: 294 KKRLLLSGTPIQNDLGEFYALISLCNPDLFDDINLFRKKFANPILIGRDKDATEKEQEIA 353
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
ER +ELS N+FILRRTN LLS LP K + + KL P+Q LY F+ K + +
Sbjct: 354 SERLTELSNITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLFLKDKKILKND 413
Query: 449 SEETKQSKILAYITALKKLCNHPKLI 474
+ K + +L I L+K+CNHP L+
Sbjct: 414 NTNNKVN-VLINIKKLEKICNHPLLL 438
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 165/278 (59%), Gaps = 18/278 (6%)
Query: 530 HLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE 589
+++Q T+D++V+VSNYTQTLD LC+E Y ++RLDG +I KR K++N F S +
Sbjct: 621 NIKQNTNDKVVIVSNYTQTLDYMEILCKENMYKFVRLDGGINIKKRHKVINDFT-HSADI 679
Query: 590 FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGT 649
F+FLLSSK+GGCG+NLI NRL+L DPDWNPANDKQA ARVWR+GQKK +IYR TGT
Sbjct: 680 FIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKKICYIYRLFCTGT 739
Query: 650 IEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCT 709
I+EKVYQRQ+SK+GL +I T+ S Q +S E+++ LF + + SE H+N+ C
Sbjct: 740 IDEKVYQRQISKDGLSNMIVT-TTNLSKDQ---MSDENVKKLFNYKMNTVSETHDNIECN 795
Query: 710 RC--QNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSE------- 760
RC + D N ++D + + G + KS +
Sbjct: 796 RCNLNGVSPNIHKVAHVDSINKNKSKGKNDNNNNNNNNNSNSNGNGNNYKSDDDKNYIDG 855
Query: 761 ----KQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGD 794
+QL E+D+N W HH +VPD IL + D
Sbjct: 856 EHFAEQLEDFEEDDVNTWAHHQNIDTVPDNILIKAVKD 893
>gi|401828407|ref|XP_003887917.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998925|gb|AFM98936.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 687
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 299/570 (52%), Gaps = 84/570 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L +Q++GV++M + G +LADDMGLGKT+Q I L L G+ +
Sbjct: 143 LFEYQKDGVEWMLKLYKEE------KGGVLADDMGLGKTVQMIVFLSVLFQSGY-----I 191
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+ +I+ P ++VS W E K++ V F++ S V ++S
Sbjct: 192 SRVLILCPATIVSQWILEWKRFY---------------PFVRVYFGFSER-SGEGVYLMS 235
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKNDQ---TLTNR----------------NDLE 344
YE F+ D+LI DE H++KN TL+ + N+L
Sbjct: 236 YERFKAREKGL----VWDILILDEGHKIKNRNAQITLSVKKVRARSKFVLSGTPIQNNLG 291
Query: 345 EFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFIL 404
E +++ +F NPG+LG F +E I G +A+ + + + S L + + +IL
Sbjct: 292 ELWSIFDFVNPGLLGSHTSFHEEFEEVIRRGGYRSASNLQVERAYKHSLMLRSLIEPYIL 351
Query: 405 RRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITAL 464
RRT + +S+ LP K ++V C LTP+Q ELYN + SK+V + + T ++ +L+ I+ L
Sbjct: 352 RRTKSQISHKLPSKEDKIVFCTLTPVQVELYNRVLESKHVMKVL---TGKANLLSGISML 408
Query: 465 KKLCNHPKLIYDTIKSGNPGTT-GFEDCIRFFPPEMFSGRSGSWTGGDGAW--VELSGKM 521
+K+CNHP+L + PG G EDC E G++ G+ + V S K+
Sbjct: 409 RKVCNHPRLFF-------PGKVDGPEDCSSETCNEKNDGKAEISLEGEERYGLVSSSCKI 461
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L LL ++ ++++ S + LD+ ++C R+Y YLR+DG T+ S R LV+
Sbjct: 462 KILMDLLKKWKEE-GSKVLVFSQTIRMLDII-EMCI-RKYTYLRMDGRTATSVRSSLVDR 518
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
FN ++ F+FLL++K GG GLNLIG +R+V++DPDWNP+ D QA R WR GQ+K V I
Sbjct: 519 FN-RDEDVFIFLLTTKVGGLGLNLIGASRIVIYDPDWNPSTDTQAKERAWRYGQRKDVEI 577
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF-----HD 696
YRF+ TIEEKVYQ+Q+ K+ L K + S+ F + + +LF+F D
Sbjct: 578 YRFVCKDTIEEKVYQKQIFKDLLGKKVL-----SNPRLNRFFNKSCINELFSFTMTSGAD 632
Query: 697 DVRSEIHENMHCTRCQNYDDGA-ESIGEGD 725
+VR +HE+ C +DGA + + +GD
Sbjct: 633 EVR--MHESHKC----ELEDGALKEVRDGD 656
>gi|223992919|ref|XP_002286143.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
gi|220977458|gb|EED95784.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
Length = 549
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 284/560 (50%), Gaps = 74/560 (13%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+GG VP ++ L P+QR G+++M+E L G GC+ D+MGLGKT+Q
Sbjct: 20 EGGLEVPAWINDRLF----PYQRIGLRWMWE-----LYCVGAGGCV-GDEMGLGKTVQVS 69
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV-S 285
+ L + F + ++V P +++S+W +E+ W G +++ DD
Sbjct: 70 SFLGAMAANRF-----IDSVLVVCPATMLSHWLSELAVWAPGLRRIMVHRSGETDDYEEQ 124
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLT------ 338
G D+F C + VL+ +YE+ R S S ++ DE +++N D +T
Sbjct: 125 GADAF---CGTGIVLVTTYESIR-RSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRL 180
Query: 339 ---NR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NR NDL E +++ +F PG LG F + I G A+ + +
Sbjct: 181 RTPNRLLMSGTPIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQ 240
Query: 387 LGIERSSELSAKVNQFILRRTNALLS--NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
L + L +N ++LRR + + +P K +V+ C+L+ Q LY ++ S V
Sbjct: 241 LAYRCAIVLRDLINPYLLRRQKKDIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEV 300
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLI-------YDTIKSGNPGTTGFEDCIRFFPP 497
+ + +L +T L+K+CNHP L+ D+++ + + C F+
Sbjct: 301 MGVMRGSVQ---LLKAVTVLRKICNHPDLVVGPDGRTLDSVQEESSSDNDDDGC--FY-- 353
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
GD +VE+SGK+ VLA++L L + R +L + +TL++ Q R
Sbjct: 354 ------------GDERFVEVSGKLQVLAKIL-PLWHKQGHRFILFCQWRKTLNIIEQFTR 400
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
++ + + RLDG T+++ RQKLV+ FN+ ++ F L++++ GG GLN+ G NR+V+FDPD
Sbjct: 401 KQNWKFARLDGNTNVASRQKLVDKFNN-DESYFCMLMTTRTGGVGLNVTGANRVVIFDPD 459
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNP D QA R WR GQKK V +YR ++ GTIEEK+YQRQ+ K + + Q+
Sbjct: 460 WNPQTDAQARERAWRFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAITNQVLQD-----P 514
Query: 678 TQGNFLSTEDLRDLFTFHDD 697
Q S +DL+DLFT D
Sbjct: 515 KQRRLFSQKDLKDLFTLKAD 534
>gi|349604547|gb|AEQ00068.1| DNA repair and recombination protein RAD54-like-like protein,
partial [Equus caballus]
Length = 308
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 189/340 (55%), Gaps = 60/340 (17%)
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
LKKLCNHP LIYD GFE + FPP +S ++ +LSGKM V
Sbjct: 14 LKKLCNHPALIYDKCVEEE---DGFEGALDIFPPG-YSSKALE--------PQLSGKMLV 61
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +L R R +D++VLVSNYTQTLDLF +LCR RRY Y+RLDGT SI KR K+V FN
Sbjct: 62 LDYILAVTRSRGNDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFN 121
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
+P +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR
Sbjct: 122 NPLSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYR 181
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
LS GTIEEK++QRQ K+ L + E+ D S +L++LFT + S+ H
Sbjct: 182 LLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE----RHFSLGELKELFTLDEASLSDTH 237
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQL 763
+ + C RC N H+++
Sbjct: 238 DRLRCRRCVNS---------------------------------------HQVRPPPD-- 256
Query: 764 GTPLEEDLNNWGHHFYSMSVPDAILQA---SAGDEVTFVF 800
G+ DL W H + D +LQA +A +TFVF
Sbjct: 257 GSDCTSDLAQWNHSTDKRGLKDEVLQAAWDAASTAITFVF 296
>gi|449278270|gb|EMC86176.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Columba livia]
Length = 684
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 298/607 (49%), Gaps = 95/607 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
+D G+ +P T++ R+LR +QREG QF++ + A GCIL DDMGLGKT+Q
Sbjct: 93 SDSGDFIPYTIN----RYLRDYQREGAQFLYR------HYANKRGCILGDDMGLGKTIQV 142
Query: 226 IALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKKW 265
I+ L +L + F + M K++ +IV P S++ NW+ E+ W
Sbjct: 143 ISFLAAVLHKKGTREDIENNMPEFLLRTMKKESKCNPKKTFLIVAPLSVLYNWKDELDTW 202
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
G ++ L S +DD ++ I +V + +YE R++ +F+ E +I
Sbjct: 203 --GYFKVCVLHGSKKDDDLNRIKQ-----GKCEVALTTYEILRLYLDEFNSVE-WSAVIV 254
Query: 326 DEAHRLKN-----DQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRR 366
DEAHR+KN QT+ + +N+++E + ++++ PG+LG +F++
Sbjct: 255 DEAHRIKNPKAQITQTMKSLKCSVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKK 314
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+ + G+ TAT+ E G + +L+ K++ + LRRT AL+S+ LP K +V C
Sbjct: 315 KFSDPVEHGQRHTATKRELATGRKAMVKLARKMSGWFLRRTKALISDQLPKKEDRMVYCS 374
Query: 427 LTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYITA 463
LT Q +Y + +++V + ET +S +Y+T
Sbjct: 375 LTEFQKAVYQAVLETEDVSLVLRAGEPCSCNSGRRRKNCCYKVNAHGETIKSLRFSYLTI 434
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEM--FSGRSGSWTGGDGAWVELSG 519
L+K+ NH L+ S C + F P+ S + T D + SG
Sbjct: 435 LRKVANHAALLQTDNTSKQQEAHIKRVCAQVFSSFPDFVQLSKDAAFETISDPKY---SG 491
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +LL H R R D+++L S T+ LD+ Q C Y RLDG T R ++V
Sbjct: 492 KMKVLQQLLNHFR-RNRDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKSEDRTRIV 550
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN + + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ K V
Sbjct: 551 REFNSTQEIN-ICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQYKAV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDS--SATQGNFLSTEDLRDLFTFHD 696
++R +S GT+EE +Y RQ+ K+ L V+ E A QG S E +LF H+
Sbjct: 610 KVFRLISLGTVEEMMYLRQVYKQQLHCAVVGSENAKRYFEAVQG---SKEHQGELFGIHN 666
Query: 697 DVRSEIH 703
+ H
Sbjct: 667 LFKLRTH 673
>gi|392512974|emb|CAD27013.2| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon
cuniculi GB-M1]
Length = 687
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 290/578 (50%), Gaps = 86/578 (14%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + +G +V L L P+Q++GV++M G +LADDMGLGK
Sbjct: 121 EHIKKEGKECEGFSVPGFLWSSLFPYQQDGVRWMLRLYRDE------KGGVLADDMGLGK 174
Query: 222 TLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRD 281
T+Q I L LL +V KA+I+ P ++VS W E K++
Sbjct: 175 TIQVIVFLGALL-----HSRVVSKALILCPATIVSQWMDEWKRFY--------------- 214
Query: 282 DVVSGIDSF-TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ---TL 337
V F + C V ++SYE F+ F D+LI DE HR+KN TL
Sbjct: 215 PFVRIFFGFPNEDCEG--VYLMSYEKFKAGVKNFLW----DVLILDEGHRIKNKNAQITL 268
Query: 338 TNR----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+ + N+L E +++ +F NPG+LG F +E I G A+
Sbjct: 269 SVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNAS 328
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + S L + + +ILRRT + +S+ LP K ++V C LTP Q ELYN + S
Sbjct: 329 NLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLES 388
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF-EDCIRFFPPEMF 500
K++ + + T ++ +L+ I+ L+K+CNHP+L++ P G EDC E
Sbjct: 389 KHIMKVL---TGKANLLSGISMLRKVCNHPRLLF-------PRKLGVSEDC----EEEAS 434
Query: 501 SGRSGS-----WTGGDGAW--VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
++G G D ++ V S K+ +L LL R + ++++ S + LD+
Sbjct: 435 DEKNGEDEALELPGADVSYDLVSSSCKIKILVDLLKKWRSEGN-KVLVFSQTIRMLDIIE 493
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
+ R +Y YLR+DG T S R LV+ FN+ ++ F+FLL++K GG GLNL G +R+V+
Sbjct: 494 RCVR--KYTYLRMDGRTPTSSRPGLVDRFNE-DEDVFLFLLTTKVGGLGLNLTGASRIVI 550
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
+DPDWNP+ D QA R WR GQKK V IYRF+ TIEEKVYQ+Q+ K+ L K +
Sbjct: 551 YDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVL---- 606
Query: 674 DSSATQGNFLSTEDLRDLFTFH---DDVRSEIHENMHC 708
S+ F + + +LF+F D V + HE C
Sbjct: 607 -SNPRLSRFFNKSCINELFSFTMTGDLVEVKTHEVHRC 643
>gi|449329940|gb|AGE96207.1| rad26-like DNA repair and recombination protein [Encephalitozoon
cuniculi]
Length = 695
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 290/578 (50%), Gaps = 86/578 (14%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + +G +V L L P+Q++GV++M G +LADDMGLGK
Sbjct: 129 EHIKKEGKECEGFSVPGFLWSSLFPYQQDGVRWMLRLYRDE------KGGVLADDMGLGK 182
Query: 222 TLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRD 281
T+Q I L LL +V KA+I+ P ++VS W E K++
Sbjct: 183 TIQVIVFLGALL-----HSRVVSKALILCPATIVSQWMDEWKRFY--------------- 222
Query: 282 DVVSGIDSF-TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ---TL 337
V F + C V ++SYE F+ F D+LI DE HR+KN TL
Sbjct: 223 PFVRIFFGFPNEDCEG--VYLMSYEKFKAGVKNFLW----DVLILDEGHRIKNKNAQITL 276
Query: 338 TNR----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+ + N+L E +++ +F NPG+LG F +E I G A+
Sbjct: 277 SVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNAS 336
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + S L + + +ILRRT + +S+ LP K ++V C LTP Q ELYN + S
Sbjct: 337 NLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLES 396
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF-EDCIRFFPPEMF 500
K++ + + T ++ +L+ I+ L+K+CNHP+L++ P G EDC E
Sbjct: 397 KHIMKVL---TGKANLLSGISMLRKVCNHPRLLF-------PRKLGVSEDC----EEEAS 442
Query: 501 SGRSGS-----WTGGDGAW--VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
++G G D ++ V S K+ +L LL R +++++ S + LD+
Sbjct: 443 DEKNGEDEALELPGADVSYDLVSSSCKIKILVDLLKKWRSE-GNKVLVFSQTIRMLDIIE 501
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
+ R +Y YLR+DG T S R LV+ FN+ ++ F+FLL++K GG GLNL G +R+V+
Sbjct: 502 RCVR--KYTYLRMDGRTPTSSRPGLVDRFNE-DEDVFLFLLTTKVGGLGLNLTGASRIVI 558
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
+DPDWNP+ D QA R WR GQKK V IYRF+ TIEEKVYQ+Q+ K+ L K +
Sbjct: 559 YDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVL---- 614
Query: 674 DSSATQGNFLSTEDLRDLFTFH---DDVRSEIHENMHC 708
S+ F + + +LF+F D V + HE C
Sbjct: 615 -SNPRLSRFFNKSCINELFSFTMTGDLVEVKTHEVHRC 651
>gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi
GB-M1]
Length = 695
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 290/578 (50%), Gaps = 86/578 (14%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + +G +V L L P+Q++GV++M G +LADDMGLGK
Sbjct: 129 EHIKKEGKECEGFSVPGFLWSSLFPYQQDGVRWMLRLYRDE------KGGVLADDMGLGK 182
Query: 222 TLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRD 281
T+Q I L LL +V KA+I+ P ++VS W E K++
Sbjct: 183 TIQVIVFLGALL-----HSRVVSKALILCPATIVSQWMDEWKRFY--------------- 222
Query: 282 DVVSGIDSF-TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ---TL 337
V F + C V ++SYE F+ F D+LI DE HR+KN TL
Sbjct: 223 PFVRIFFGFPNEDCEG--VYLMSYEKFKAGVKNFLW----DVLILDEGHRIKNKNAQITL 276
Query: 338 TNR----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+ + N+L E +++ +F NPG+LG F +E I G A+
Sbjct: 277 SVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNAS 336
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + S L + + +ILRRT + +S+ LP K ++V C LTP Q ELYN + S
Sbjct: 337 NLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLES 396
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF-EDCIRFFPPEMF 500
K++ + + T ++ +L+ I+ L+K+CNHP+L++ P G EDC E
Sbjct: 397 KHIMKVL---TGKANLLSGISMLRKVCNHPRLLF-------PRKLGVSEDC----EEEAS 442
Query: 501 SGRSGS-----WTGGDGAW--VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
++G G D ++ V S K+ +L LL R + ++++ S + LD+
Sbjct: 443 DEKNGEDEALELPGADVSYDLVSSSCKIKILVDLLKKWRSEGN-KVLVFSQTIRMLDIIE 501
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
+ R +Y YLR+DG T S R LV+ FN+ ++ F+FLL++K GG GLNL G +R+V+
Sbjct: 502 RCVR--KYTYLRMDGRTPTSSRPGLVDRFNE-DEDVFLFLLTTKVGGLGLNLTGASRIVI 558
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
+DPDWNP+ D QA R WR GQKK V IYRF+ TIEEKVYQ+Q+ K+ L K +
Sbjct: 559 YDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVL---- 614
Query: 674 DSSATQGNFLSTEDLRDLFTFH---DDVRSEIHENMHC 708
S+ F + + +LF+F D V + HE C
Sbjct: 615 -SNPRLSRFFNKSCINELFSFTMTGDLVEVKTHEVHRC 651
>gi|82705590|ref|XP_727033.1| DNA repair protein RAD54 [Plasmodium yoelii yoelii 17XNL]
gi|23482686|gb|EAA18598.1| DNA repair protein RAD54-like-related [Plasmodium yoelii yoelii]
Length = 1163
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 216/355 (60%), Gaps = 34/355 (9%)
Query: 139 ENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFEC 198
EN+ +E+ + DPLVL++ E + I VDP+L ++LR HQREGVQF+FEC
Sbjct: 220 ENDKVED---IIRKFDPLVLYEDENSK--------IEVDPILAQYLREHQREGVQFVFEC 268
Query: 199 VSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNW 258
+ L + I GCILADDMGLGKTLQSI++LYTLL QG++ K V++ +I+ P SL++NW
Sbjct: 269 LMNLKDEK-ISGCILADDMGLGKTLQSISVLYTLLKQGYNKKAAVRRCLILCPASLINNW 327
Query: 259 EAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE 318
EI KW+ R + + +S ++ +VS ++ F S +LI SYE FR+++ S
Sbjct: 328 NDEINKWLPNRCTVTCVNDSAKEKIVSKLEGFKYDLKS-TILICSYECFRINNDSIDKS- 385
Query: 319 SCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILG 359
+ D++ICDEAHRLKND+T T +NDL EFFA+++ NP +
Sbjct: 386 AIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLLLSGTPIQNDLGEFFALISLCNPDLFD 445
Query: 360 DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKI 419
D FR+ + I+ GR+ ATE+E+++ ER +ELS N+FILRRTN LLS LP K
Sbjct: 446 DTNSFRKKFANPILIGRDKDATEKEQQIASERLAELSTITNKFILRRTNNLLSKVLPVKY 505
Query: 420 IEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
+ + KL P+Q LY F+ K + + + K + +L I L+K+CNHP L+
Sbjct: 506 LINIFIKLNPIQEALYVLFLKDKKLLKPDNSNNKVN-VLINIKKLEKICNHPLLL 559
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 174/303 (57%), Gaps = 47/303 (15%)
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
+ LS K +L LL ++Q T+D++V+VSNYTQTLD LCRE Y ++RLDG SI
Sbjct: 654 CYYNLSSKFQLLHFLLKTIKQETNDKVVIVSNYTQTLDYMEILCRENYYKFVRLDGGISI 713
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
KR K+++ F + + + F+FLLSSK+GGCG+NLI NRL+L DPDWNPANDKQA ARVWR
Sbjct: 714 KKRHKVISDFTN-TDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWR 772
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
+GQKK +IYR TGTI+EKVYQRQ+SK+GL +I T+ S Q LS E+++ LF
Sbjct: 773 EGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVT-NTNLSKDQ---LSDENVKKLF 828
Query: 693 TFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGC 752
+ ++ E H+N+ C RC N+ D E E
Sbjct: 829 NYKNNTICETHDNIECNRC-NFKDNTEVYSE----------------------------- 858
Query: 753 LHKLKSSEKQLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIE 812
QL EED+N W HH +VPDA+L A E T N ++ +PI
Sbjct: 859 ---------QLEDFEEEDVNTWAHHLNIDTVPDAVL-IKAVKEATECKINHMNT--LPIL 906
Query: 813 SKV 815
K+
Sbjct: 907 KKL 909
>gi|440902038|gb|ELR52884.1| DNA excision repair protein ERCC-6 [Bos grunniens mutus]
Length = 1488
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 273/564 (48%), Gaps = 99/564 (17%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALL------- 229
L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L
Sbjct: 492 FLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 543
Query: 230 ---------YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
LLC+ F+G + IIV PT+++ W E W + R
Sbjct: 544 IRTRGSNYRQVLLCRLFEG---LGPTIIVCPTTVMHQWVKEFHTW----------WPAFR 590
Query: 281 DDVVSGIDSFTDPCSSL--------QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLK 332
V+ SFT L +LI SY R+ S +I DE H+++
Sbjct: 591 VAVLHETGSFTHKKEKLVRDIARCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIR 649
Query: 333 NDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N +N+L E +++ +F PG LG F + I
Sbjct: 650 NPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPIT 709
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQ 431
G A+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q
Sbjct: 710 MGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQ 769
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFED 490
++Y +FI SK V R ++ E + I + + AL+K+CNHP L SG P G D
Sbjct: 770 HKVYQNFIDSKEVYRILNGEMQ---IFSGLVALRKICNHPDLF-----SGGPKNLKGIPD 821
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
E+ + G W + SGKM V+ LL + + R++L S Q LD
Sbjct: 822 ------EELGEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLD 866
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ R ++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR
Sbjct: 867 ILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANR 925
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
++++DPDWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + +
Sbjct: 926 VIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK 985
Query: 671 EQTDSSATQGNFLSTEDLRDLFTF 694
+ Q F + DL +LFT
Sbjct: 986 D-----PKQRRFFKSNDLYELFTL 1004
>gi|432112497|gb|ELK35235.1| DNA excision repair protein ERCC-6 [Myotis davidii]
Length = 1489
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 272/559 (48%), Gaps = 83/559 (14%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALL---- 229
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L
Sbjct: 489 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 540
Query: 230 ------------YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
LLC+ F+G + IIV PT+++ W E W +A+
Sbjct: 541 YSKIRTRGSNYRQVLLCRLFEG---LGPTIIVCPTTVMHQWVKEFHTWWPPF--RVAVLH 595
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
T D +LI SY R+ S +I DE H+++N
Sbjct: 596 ETGSYTHRKEKLIRDIAHCHGILITSYSYIRLRQDDIS-RHDWHYVILDEGHKIRNPNAA 654
Query: 338 TN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
+N+L E +++ +F PG LG F + I G
Sbjct: 655 ITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYS 714
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
A+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y
Sbjct: 715 NASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQ 774
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT-GFEDCIRFF 495
+FI SK V R ++ E + + + + AL+K+CNHP L SG P TT G D
Sbjct: 775 NFIDSKEVYRILNGEMQ---VFSGLIALRKICNHPDLF-----SGGPKTTRGISDN---- 822
Query: 496 PPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
PE + G W SGKM V+ LL + + R++L S Q LD+
Sbjct: 823 EPE--EDQFGHW--------RRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVF 871
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
R ++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++D
Sbjct: 872 LRAQKYSYLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIYD 930
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNP+ D QA R WR GQ+K+V +YR L+ GTIEEK+Y RQ+ K+ L + ++
Sbjct: 931 PDWNPSTDTQARERAWRIGQRKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD---- 986
Query: 676 SATQGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 987 -PKQRRFFKSNDLYELFTL 1004
>gi|417406531|gb|JAA49919.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1486
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 268/549 (48%), Gaps = 76/549 (13%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 496 FLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 547
Query: 237 ---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
F G + +IV PT+++ W E W +A+ T
Sbjct: 548 IRTRGSNYRFQG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAVLHETGSSTHKKE 602
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
D +LI SY R+ S +I DE H+++N
Sbjct: 603 KLIQDIVHCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAITLACKQFRT 661
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L E +++ +F PG LG F + I G A+ + K
Sbjct: 662 PHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTA 721
Query: 389 IERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK V R
Sbjct: 722 YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYR 781
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSGRSG 505
++ ET+ I + +TAL+K+CNHP L SG P G D E+ R G
Sbjct: 782 ILNGETQ---IFSGLTALRKICNHPDLF-----SGGPKNHKGISD------DELEEDRFG 827
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
W + SGKM V+ LL + + + R++L S Q LDL R ++Y YL+
Sbjct: 828 YW--------KRSGKMIVVESLL-KIWHKQNQRVLLFSQSRQMLDLLEVFLRAQKYSYLK 878
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
+DGTT+I+ RQ L+ FN + + FVFLL+++ GG G+NL G NR++++DPDWNP+ D Q
Sbjct: 879 MDGTTTIASRQPLIARFNKET-SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQ 937
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F +
Sbjct: 938 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFKS 992
Query: 686 EDLRDLFTF 694
DL +LF+
Sbjct: 993 NDLYELFSL 1001
>gi|225560868|gb|EEH09149.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
G186AR]
Length = 1511
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 152/204 (74%), Gaps = 6/204 (2%)
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGKM VL R+L +RQ T+D+IVL+SNYTQTLDLF +LCR R+Y LRLDGT +++KRQK
Sbjct: 490 SGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQK 549
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
LV+ FNDP+ EFVFLLSSKAGGCG+NLIG NRLVLFDPDWNPA D+QA ARVWRDGQKK
Sbjct: 550 LVDKFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKK 609
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
F+YRF++TGTIEEK++QRQ K+ L + DS+ S + LR+LF F +
Sbjct: 610 DCFVYRFIATGTIEEKIFQRQSHKQSLSSCV----VDSAEDVERHFSLDSLRELFQFKPE 665
Query: 698 VRSEIHENMHCTRCQNYDDGAESI 721
RS+ H+ C RC+ DG + I
Sbjct: 666 TRSDTHDTFKCKRCR--PDGTQHI 687
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 140/287 (48%), Gaps = 65/287 (22%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DG +P+ +DP L + LRPHQ EGV+ LQ I
Sbjct: 201 DGRPKIPVVIDPKLAKVLRPHQVEGVK-----------------------------LQCI 231
Query: 227 ALLYTLLCQGFD-GKPMVKKAIIVTPTSLVSNWEAEIKKWVG----------GRVQLIAL 275
LL+TLL Q + GK ++K II P++LV NW E KW+G G+ + L
Sbjct: 232 TLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKVEL 291
Query: 276 CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-- 333
R VS S P VLIVSYET R++ + LL+CDE HRLKN
Sbjct: 292 TSQLRQWAVSSGRSIVRP-----VLIVSYETLRLYVDELK-DTPIGLLLCDEGHRLKNGD 345
Query: 334 DQTLTN-----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
QT T +NDL E+F+++NF NP ILG F + YE I+ GR
Sbjct: 346 SQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRNEFHKKYEMPILRGR 405
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
+ ++E++K G E +EL VN+FI+RRTN +LS +LP K VV
Sbjct: 406 DADGSDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPVKYEHVV 452
>gi|224125738|ref|XP_002319663.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222858039|gb|EEE95586.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1404
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 299/611 (48%), Gaps = 101/611 (16%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFE----CVSGLLNAAGIHGCILADDMGLGKTLQSIALL 229
+ + P L L+ HQ G++F++E + + + GCILA MGLGKT Q IA L
Sbjct: 619 VRIPPSLSSKLKAHQVAGIRFLWENIIQSIRKVKSGDNGLGCILAHTMGLGKTFQVIAFL 678
Query: 230 YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDS 289
YT + +G D ++ A+IVTP +++ NW E KW V+ I + +DV ++
Sbjct: 679 YTAM-RGVD--LGLRTALIVTPVNVLHNWRKEFMKWTPSEVKPIRVF--MLEDVSRFLEL 733
Query: 290 FTDPCSSLQVLIVSYETFRMHS----------SKFSCS---ESCDLLICDEAHRLKNDQT 336
+ V ++ Y FR S ++ CS + D+L+CDEAH +KN +
Sbjct: 734 LAKWRAKGGVFLIGYSAFRNLSLGKNVKERNMAREMCSALQDGPDILVCDEAHIIKNTRA 793
Query: 337 LTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGRE 377
T + N+L E++ MV+F G LG + FR ++ I G+
Sbjct: 794 ETTQALKLVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 853
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNH 437
+T ++ K+ +RS L ++ F+ R +++ LPPK + VV KL+PLQ +LY
Sbjct: 854 TNSTVDDVKIMNQRSHILYEQLKGFVQRMDMSVVKKDLPPKTVFVVAVKLSPLQRKLYKR 913
Query: 438 F--IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI--------------------- 474
F +H RA +E+T +S Y AL ++ NHP ++
Sbjct: 914 FLDVHGFTNGRASNEKTSKSFFAGY-QALAQIWNHPGILQLRKGREYVGNVENFLADDCS 972
Query: 475 ------YDTIKSGNPGTTGFEDCIRF---FPPEMFSGRSGSWTGGDGAWVELSGKMHVLA 525
Y+TI G P F I F P + + + V+ SGKM +L
Sbjct: 973 SDENVDYNTIVEGTP----FHHFIHIACQFDPSVVDWWNDLLLENNYKEVDYSGKMVLLL 1028
Query: 526 RLLGHLRQRTDDRIVLVSNYTQTLDLFA-------QLCRERRY-----PYLRLDGTTSIS 573
+L + D+ ++ + TLDL +L ++ ++ + RLDG T S
Sbjct: 1029 DILV-MSSDVGDKTLVFTQSIPTLDLIELYLSRLPRLGKKGKFWRKGKDWYRLDGRTESS 1087
Query: 574 KRQKLVNHFNDPSKNEFV--FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
+RQ+LV FNDP KN+ V L+S++AG G+NL NR+V+ D WNP D QA R W
Sbjct: 1088 ERQRLVERFNDP-KNKRVKCTLISTRAGSLGINLYAANRVVIVDGSWNPTYDLQAIYRAW 1146
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRD 690
R GQ K VF YR ++ GT+EEK+Y+RQ++KEGL +V+ ++Q + +S E++
Sbjct: 1147 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRT------ISREEMLH 1200
Query: 691 LFTFHDDVRSE 701
LF F DD S+
Sbjct: 1201 LFEFGDDENSD 1211
>gi|405953464|gb|EKC21121.1| DNA excision repair protein ERCC-6 [Crassostrea gigas]
Length = 1410
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 276/552 (50%), Gaps = 70/552 (12%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQ 224
+GG VP + L + QR GV +++E C S G I+ D+MGLGKT+Q
Sbjct: 430 EGGLKVPSRIWSKLFNY----QRVGVSWLWELHCQSA--------GGIIGDEMGLGKTIQ 477
Query: 225 SIALLYTLLCQGFDGKPM----VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
IA L L K + IIVTPT+++S W E KW + +A+ S+
Sbjct: 478 MIAFLAALRQSKLASKHFKYCGLGPVIIVTPTTVMSQWVKEFHKWWP--LFRVAILHSSG 535
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN 339
+ D VLI S+ T +H K ++ DE H+++N D +T
Sbjct: 536 SFTGAEEDLIWSIVKDRGVLITSFTTLVVHQDKV-LPYDWHYVVLDEGHKIRNPDAQVTQ 594
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+N+L+E +++ +F PG LG F +++ I+ G AT
Sbjct: 595 ACKQFRTPHRIILSGSPIQNNLKELWSLFDFVFPGKLGTLPDFLQHFSIPIVQGGYANAT 654
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
E + + + + L +N ++LRR A + LP K +V+ C+LT Q ++Y ++ S
Sbjct: 655 EIQVQTAYKCACVLRDTINPYLLRRMKADVKIDLPSKNEQVLFCRLTDEQRDVYLEYLQS 714
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
+ + +S + +I A + L+K+CNHP I +G P ED
Sbjct: 715 RECQAILS---GKYQIFAGLITLRKICNHPD-----ICTGGPKLLIGEDT---------- 756
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
G T G W + SGKM V+ LL +Q+ R++L S LD+F + ++Y
Sbjct: 757 --QGDPTLEYGYW-KRSGKMIVVEALLKLWKQQ-GHRVLLFSQSRAMLDIFESFVQNQKY 812
Query: 562 PYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
YLR+DG T IS RQ L+ +N DPS ++FLL+++ GG G+NL G NR+++FDPDWNP
Sbjct: 813 CYLRMDGGTPISSRQALITTYNQDPSI--YLFLLTTRVGGLGVNLTGANRVIIFDPDWNP 870
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
+ D QA R WR GQ K+V IYR L++GTIEEK+Y RQ+ K+ L + ++ Q
Sbjct: 871 STDTQARERTWRIGQTKQVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKD-----PKQR 925
Query: 681 NFLSTEDLRDLF 692
F + DL +LF
Sbjct: 926 RFFKSNDLYELF 937
>gi|344274673|ref|XP_003409139.1| PREDICTED: DNA excision repair protein ERCC-6 [Loxodonta africana]
Length = 1501
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 276/556 (49%), Gaps = 84/556 (15%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTL- 232
V L R L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 503 VPGFLFRKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 554
Query: 233 ----LCQG----FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCES---TR 280
+G F+G + +IV PT+++ W E W RV ++ S +
Sbjct: 555 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKK 611
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
+ ++ I + +LI SY R+ S +I DE H+++N
Sbjct: 612 EKLIRDIARYHG------ILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAITL 664
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+N+L E +++ +F PG LG F + I G A+
Sbjct: 665 ACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNAS 724
Query: 382 EEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
+ K + + L +N ++LRR ++ +S LP K +V+ C+LT Q E+Y +FI
Sbjct: 725 PVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNFI 784
Query: 440 HSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP-GTTGFEDCIRFFPPE 498
SK V R ++ E + I + + AL+K+CNHP L SG P TG D E
Sbjct: 785 DSKEVYRILNGEMQ---IFSGLVALRKICNHPDLF-----SGGPRHLTGLPDG------E 830
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
+ G W + SGKM V+ LL + + R++L S Q LD+ R
Sbjct: 831 SEEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRA 881
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R+Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDW
Sbjct: 882 RKYSYLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDW 940
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++
Sbjct: 941 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PK 995
Query: 679 QGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 996 QRRFFKSNDLYELFTL 1011
>gi|431901320|gb|ELK08347.1| DNA excision repair protein ERCC-6 [Pteropus alecto]
Length = 1491
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 275/560 (49%), Gaps = 91/560 (16%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALL------- 229
L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L
Sbjct: 497 FLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 548
Query: 230 ---------YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---ALC 276
LLC+ FDG + IIV PT+++ W E W RV ++ C
Sbjct: 549 IRTRGSNYRQVLLCRLFDG---LGPTIIVCPTTVMHQWVKEFHMWWPPFRVAILHESGSC 605
Query: 277 ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT 336
++ ++ I C +LI SY R+ S S +I DE H+++N
Sbjct: 606 TRKKEKLIRDIAR----CHG--ILITSYSYIRLMQDDIS-SHDWHYVILDEGHKIRNPNA 658
Query: 337 LTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGRE 377
+N+L E +++ +F PG LG F + I G
Sbjct: 659 AITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGY 718
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELY 435
A+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y
Sbjct: 719 SNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVY 778
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRF 494
+FI SK V R ++ E + I + + AL+K+CNHP L SG P G D
Sbjct: 779 QNFIDSKEVYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGIPD---- 826
Query: 495 FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ 554
E+ + G W + SGKM V+ LL + + R++L S Q L +
Sbjct: 827 --DELGEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLGILEI 875
Query: 555 LCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
R + Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++
Sbjct: 876 FLRAQNYSYLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIY 934
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DPDWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++
Sbjct: 935 DPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLINRVLKD--- 991
Query: 675 SSATQGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 992 --PKQRRFFKSNDLYELFTL 1009
>gi|351700010|gb|EHB02929.1| DNA excision repair protein ERCC-6 [Heterocephalus glaber]
Length = 1488
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 279/563 (49%), Gaps = 91/563 (16%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALL---- 229
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L
Sbjct: 497 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 548
Query: 230 ------------YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI--- 273
LLC+ F+G + IIV PT+++ W E W RV ++
Sbjct: 549 YSKIRTRGSNYRQVLLCRLFEG---LGPTIIVCPTTVMHQWVKEFHTWWPSFRVAILHET 605
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN 333
C +++++ I C +LI SY R+ FS ++ +I DE H+++N
Sbjct: 606 GSCTHRKENLIRDIAH----CHG--ILITSYSYIRLMQDDFS-RQNWHYVILDEGHKIRN 658
Query: 334 DQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
+N+L E +++ +F PG LG F + I
Sbjct: 659 PNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITM 718
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQS 432
G A+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q
Sbjct: 719 GGYANASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQH 778
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
++Y +FI+SK V + ++ E + + + I AL+K+CNHP L SG P G
Sbjct: 779 KVYQNFINSKEVYKILNGEMQ---LFSGIVALRKICNHPDLF-----SGGPKNLGG---- 826
Query: 493 RFFPP-EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
P E+ + G W + SGKM V+ LL + + R++L S Q L +
Sbjct: 827 --LPDDELEEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLHI 875
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
R ++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+
Sbjct: 876 LEVFLRAQKYSYLKMDGTTTIASRQPLIARYNEDA-SIFVFLLTTRVGGIGVNLTGANRV 934
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+++DPDWNP+ D QA R WR GQK++V +YR L GTIEEK+Y RQ+ K+ L + ++
Sbjct: 935 IIYDPDWNPSTDTQARERAWRIGQKRQVTVYRLLMAGTIEEKIYHRQIFKQFLTNRVLKD 994
Query: 672 QTDSSATQGNFLSTEDLRDLFTF 694
F + DL +LFT
Sbjct: 995 PKPR-----RFFKSNDLYELFTL 1012
>gi|449513862|ref|XP_004174948.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Taeniopygia guttata]
Length = 1156
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 293/608 (48%), Gaps = 97/608 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
+D G+ +P T++ R+LR +QREG QF++ + A GCIL DDMGLGKT+Q
Sbjct: 101 SDNGDFIPYTIN----RYLRDYQREGAQFLYR------HYANKRGCILGDDMGLGKTIQV 150
Query: 226 IALLYTLLCQ---------------------GFDGKPMVKKAIIVTPTSLVSNWEAEIKK 264
I+ L +L + G D P K +IV P S++ NW+ E+
Sbjct: 151 ISFLAAVLHKKGTREDVENNMPEFLLRTMKKGSDCNPK-KTFLIVAPLSVLYNWKDELDT 209
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +DD ++ I +V + +YE R++ +F+ E +I
Sbjct: 210 W--GYFKVSVLHGSKKDDDMNRIKQ-----GKCEVALTTYEILRLYLDEFNSIE-WSAVI 261
Query: 325 CDEAHRLKN-----DQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN QT+ + +N+++E + ++++ PG+LG +F+
Sbjct: 262 VDEAHRIKNPKAQITQTMKSLKCSVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRVHFK 321
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + +L+ ++ + LRRT AL+S+ LP K +V C
Sbjct: 322 KKFSDPVEHGQRHTATKRELATGRKAMVKLARIMSGWFLRRTKALISDQLPKKEDRMVFC 381
Query: 426 KLTPLQSELYNHFIHSKNV-----------------------KRAISEETKQSKILAYIT 462
LT Q +Y + + +V K ET +S +Y+
Sbjct: 382 SLTEFQKAVYQAVLETDDVTLVLRAGEPCSCNSGQKRKNCCYKANAHGETIKSLRFSYLM 441
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEM--FSGRSGSWTGGDGAWVELS 518
L+K+ NH L+ S C + F P+ S + T D + S
Sbjct: 442 ILQKVANHAALLQTDNTSKLQEVHIKRVCSQVFSSFPDFVQLSKDAAFETISDPKY---S 498
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H Q+ D+++L S T+ LD+ Q C Y RLDG T R ++
Sbjct: 499 GKMKVLQQLLNHF-QKNKDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKSEDRIRI 557
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN + + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ +
Sbjct: 558 VREFNSLQEIN-ICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQHRA 616
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDS--SATQGNFLSTEDLRDLFTFH 695
V ++R +S GT+EE +Y RQ+ K+ L VI E A QG S E +LF H
Sbjct: 617 VKVFRLISLGTVEEIMYLRQVYKQQLHCAVIGTENARRYFEAVQG---SKEHQGELFGIH 673
Query: 696 DDVRSEIH 703
+ + H
Sbjct: 674 NLFKLRTH 681
>gi|342319537|gb|EGU11485.1| RAD26-like SNF2 family DNA-dependent ATPase [Rhodotorula glutinis
ATCC 204091]
Length = 1445
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 309/659 (46%), Gaps = 118/659 (17%)
Query: 182 RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ-GF--D 238
RFLRP+QREG +F++ GI G IL DDMGLGKT+Q IA L ++ + GF D
Sbjct: 629 RFLRPYQREGAEFLYGQFK-----KGI-GGILGDDMGLGKTIQVIAFLSAVMNKTGFKKD 682
Query: 239 GKPMVKKAI-------------------IVTPTSLVSNWEAEIKKWVGGRVQLIALCEST 279
K AI I P S+V NW+ E + W V + S
Sbjct: 683 DAGKRKDAINDLAADEPFKPTDLGLTCLIACPASVVGNWQREFRTWGYFDVGIYGGPSSD 742
Query: 280 RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
+ V++ D L V+I S E R + F+ + ++I DEAHR+KN ++ T
Sbjct: 743 KKAVLNRFDR-----GYLDVVIASIEGVRNNIDDFAARD-FSIVIVDEAHRVKNPKSNTT 796
Query: 340 -------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+N L+EF+ ++N+ P +G + + + I ++ TA
Sbjct: 797 IALHRFPTPLRYGLTGTAIQNRLDEFWCILNWAVPKRVGTHSQWNQLVSRPIKYAQQATA 856
Query: 381 TEEEKKLGIERSSELSAKV-NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
T++E +G R+ L+ K+ F LRRT + LP K +V C LT LQ ++Y +
Sbjct: 857 TDDEIAVGRSRAVALAGKLLPHFWLRRTKESVKIQLPKKTDNIVLCPLTALQKDVYKSLL 916
Query: 440 HSKNVK-----------RAISEETKQSK------------ILAYITALKKLCNHPKLIYD 476
+ + VK ++ E+ ++ K I YIT K+ NH LIY
Sbjct: 917 NLEQVKIILTADDPCPCGSVDEKNERYKRGSCCDQKWTKLIFKYITLFAKVSNHLGLIYP 976
Query: 477 TIKSGNPGTTGFE---DCIRFFPPEMFSGRSGSWTGGDGAWVE--LSGKMHVLARLLGHL 531
+ T +E + R P + R T G A+++ L GK +L +LL +
Sbjct: 977 DKEDKTTNPTKYEQDLEWARAAFPNDYEKR----TPGPMAFLDPNLCGKWTILCQLL-EI 1031
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV 591
D++++ + + +DL L + RY YL LDG+T R LV+ FNDP +F
Sbjct: 1032 WHSQGDKVLIFTMSLKIIDLLENLMQHTRYEYLVLDGSTPQEDRMPLVDEFNDPHSEKFC 1091
Query: 592 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIE 651
FL+S++AGG GLNL NR+V+FDP+WNPA+D QA R +R GQ + V +YR + GT+E
Sbjct: 1092 FLISTRAGGVGLNLTAANRVVIFDPNWNPAHDLQAMDRAYRFGQTREVTVYRLIGAGTLE 1151
Query: 652 EKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE-----------DLRDLFTFHDDV-- 698
E +Y RQ K + I D+SA + F E ++++F F++++
Sbjct: 1152 ELIYNRQQYK----RSIANTSYDASAERRLFTGVEGEGKEQAGELWGVKNIFKFNENMSL 1207
Query: 699 ------RSEIHENMHCTRCQNYDDGAESIGEGDETNSANKND-QSDQEVTDIGGFAGLA 750
R+++ E + R N D D+ +A + D+ V +I G++ A
Sbjct: 1208 TEMSIRRADLTELEYALRNANLFD-------ADDAKAAKVEEPDPDEVVAEITGYSAKA 1259
>gi|169790814|ref|NP_001013626.2| RAD26L hypothetical protein isoform 1 [Mus musculus]
Length = 1537
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 292/596 (48%), Gaps = 87/596 (14%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 108 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIEG-------RGCILGDDMGLGKTIQ 156
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M KK +IV P S++ NW+ E+
Sbjct: 157 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDT 216
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ + + ++ + +YET R+ + + E +I
Sbjct: 217 W--GYFRVTVLHGSKKDNELLRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 268
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG +F+
Sbjct: 269 VDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFK 328
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V C
Sbjct: 329 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYC 388
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 389 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSRGDTVRTLCLSYLT 448
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSGK 520
L+K+ NH L+ S + T C R F P+ F +S + + SGK
Sbjct: 449 VLQKVANHVALLQAASTSKHQETVIKRICDRVFSRFPD-FVQKSKDAAFETLSDPKYSGK 507
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL H R++ D +++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 508 MKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVK 566
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN S++ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ + V
Sbjct: 567 EFNS-SQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVK 625
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ R +S GT+EE +Y RQ+ K+ L V+ + + S E +LF H+
Sbjct: 626 VLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHN 681
>gi|148684276|gb|EDL16223.1| stretch responsive protein 278, isoform CRA_b [Mus musculus]
Length = 1546
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 292/596 (48%), Gaps = 87/596 (14%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 117 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIEG-------RGCILGDDMGLGKTIQ 165
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M KK +IV P S++ NW+ E+
Sbjct: 166 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDT 225
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ + + ++ + +YET R+ + + E +I
Sbjct: 226 W--GYFRVTVLHGSKKDNELLRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 277
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG +F+
Sbjct: 278 VDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFK 337
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V C
Sbjct: 338 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYC 397
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 398 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSRGDTVRTLCLSYLT 457
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSGK 520
L+K+ NH L+ S + T C R F P+ F +S + + SGK
Sbjct: 458 VLQKIANHVALLQAASTSKHQETVIKRICDRVFSRFPD-FVQKSKDAAFETLSDPKYSGK 516
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL H R++ D +++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 517 MKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVK 575
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN S++ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ + V
Sbjct: 576 EFNS-SQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVK 634
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ R +S GT+EE +Y RQ+ K+ L V+ + + S E +LF H+
Sbjct: 635 VLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHN 690
>gi|296220127|ref|XP_002756186.1| PREDICTED: DNA excision repair protein ERCC-6 [Callithrix jacchus]
Length = 1490
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 497 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 548
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 549 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 603
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 604 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 662
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 663 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFLEQFSVPITMGGYSNASPVQV 722
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK
Sbjct: 723 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKE 782
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 783 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 828
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 829 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 879
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ K+ FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 880 YLKMDGTTTIASRQPLITRYNE-DKSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 938
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 939 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 993
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 994 FKSNDLYELFTL 1005
>gi|297684878|ref|XP_002820041.1| PREDICTED: uncharacterized protein LOC100434553 [Pongo abelii]
Length = 1549
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 293/601 (48%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++E IHG CIL DDMGLGKT+
Sbjct: 109 SDDGDSIPYTIN----RYLRNYQREGTRFLYEHY--------IHGGGCILGDDMGLGKTV 156
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P+ A +IV P S++ NW+ E+
Sbjct: 157 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPLCSTAKKMFLIVAPLSVLYNWKDEL 216
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + S
Sbjct: 217 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELN-SLQWSA 268
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG Y
Sbjct: 269 VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRTY 328
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 329 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 388
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 389 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 448
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 449 LTVLQKIANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 507
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 508 GKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 567 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 625
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 626 VKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 682
Query: 696 D 696
+
Sbjct: 683 N 683
>gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi]
gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi]
Length = 1103
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 264/543 (48%), Gaps = 69/543 (12%)
Query: 184 LRPHQREGVQFMFE----CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L +Q+ GV+++ E CV G ILAD+MGLGKT+Q I+ L L +
Sbjct: 231 LYKYQKTGVRWLNELHNQCVGG----------ILADEMGLGKTVQVISFLRGLAFSCLED 280
Query: 240 KPM----VKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTDPC 294
+ + +I+ PT+L+ W E + W RV ++ + S I
Sbjct: 281 RGFSFSGLGPVLIICPTTLIRQWLKEFRTWFPLCRVAILHISGSFHGQSAQLIRKMVVSQ 340
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN-------------- 339
S VL+ SY TF + K + +I DE H+++N D +T
Sbjct: 341 SDGSVLLTSYGTF-AKNRKHLIDKVWHYIILDEGHKIRNPDAQITLAVKEIRTPHRLILS 399
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+N L E +++++F PG LG F + I G AT + + + + L
Sbjct: 400 GSPLQNSLRELWSLIDFVYPGRLGALKSFMDKFSIPITQGGYANATAVQVRTAYKCACIL 459
Query: 396 SAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
+N ++LRR + +S HLP K +V+ C +TP Q +LY ++ S+ R +S K
Sbjct: 460 RDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRKLYEEYLSSRECDRILS--GK 517
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ IT L+KLCNHP L+ +G P F D EM G GA
Sbjct: 518 MDAFVGLIT-LRKLCNHPDLV-----TGGPNK--FNDYDVTADEEM----------GFGA 559
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
SGKM VL LL L +R +++L S Q L + + + RY YLR+DGTT +
Sbjct: 560 PCR-SGKMQVLKALL-KLWKRQGQKVLLFSQSRQMLTILEKFVIQERYEYLRMDGTTVVR 617
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
RQ LV FN +K F+FLL+++ GG G+NL G NR+V+FDPDWNP+ D QA R WR
Sbjct: 618 SRQLLVEEFNKNNKI-FIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRI 676
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
GQ++ V IYR L+ GTIEEK+Y RQ+ K L I + Q F T +L +LF
Sbjct: 677 GQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVD-----PRQRRFFKTNELHELFC 731
Query: 694 FHD 696
D
Sbjct: 732 LGD 734
>gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus]
Length = 1481
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 270/557 (48%), Gaps = 92/557 (16%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 492 FLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 543
Query: 237 ---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
F+G + IIV PT+++ W E W + R V+
Sbjct: 544 IRTRGSNYRFEG---LGPTIIVCPTTVMHQWVKEFHTW----------WPAFRVAVLHET 590
Query: 288 DSFTDPCSSL--------QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
SFT L +LI SY R+ S +I DE H+++N
Sbjct: 591 GSFTHKKEKLVRDIARCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVT 649
Query: 340 -------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+N+L E +++ +F PG LG F + I G A
Sbjct: 650 LACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNA 709
Query: 381 TEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F
Sbjct: 710 SPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF 769
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPP 497
I SK V R ++ E + I + + AL+K+CNHP L SG P G D
Sbjct: 770 IDSKEVYRILNGEMQ---IFSGLVALRKICNHPDLF-----SGGPKNLKGIPD------E 815
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
E+ + G W + SGKM V+ LL + + R++L S Q LD+ R
Sbjct: 816 ELGEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLR 866
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPD
Sbjct: 867 AQKYSYLKMDGTTAIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIYDPD 925
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++
Sbjct: 926 WNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----P 980
Query: 678 TQGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 981 KQRRFFKSNDLYELFTL 997
>gi|441657345|ref|XP_004091168.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Nomascus leucogenys]
Length = 1492
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 270/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 498 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 549
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 550 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 604
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 605 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 663
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 664 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 723
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK
Sbjct: 724 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKE 783
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+ +
Sbjct: 784 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------EELEAD 829
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 830 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 880
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+++ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 881 YLKMDGTTTVASRQPLITRYNEDT-SIFVFLLTTRVGGLGINLTGANRVVIYDPDWNPST 939
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 940 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 994
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 995 FKSNDLYELFTL 1006
>gi|397479836|ref|XP_003811210.1| PREDICTED: uncharacterized protein LOC100971761 [Pan paniscus]
Length = 1550
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 292/601 (48%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++ IHG CIL DDMGLGKT+
Sbjct: 109 SDDGDSIPYTIN----RYLRDYQREGTRFLY--------GHYIHGGGCILGDDMGLGKTV 156
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P+ A +IV P S++ NW+ E+
Sbjct: 157 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDEL 216
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 217 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 268
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG Y
Sbjct: 269 VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTY 328
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 329 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 388
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 389 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 448
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 449 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 507
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 508 GKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 567 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 625
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 626 VKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 682
Query: 696 D 696
+
Sbjct: 683 N 683
>gi|410975581|ref|XP_003994209.1| PREDICTED: DNA excision repair protein ERCC-6 [Felis catus]
Length = 1485
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 267/549 (48%), Gaps = 76/549 (13%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L FL +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 494 LFKNFLSMYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 545
Query: 237 ---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
F G + IIV PT+++ W E W +A+ T
Sbjct: 546 IRTRGSNYRFKG---LGPTIIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTHKKE 600
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
D +LI SY R+ S +I DE H+++N
Sbjct: 601 KLIRDIAHCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQFRT 659
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L E +++ +F PG LG F + I G A+ + K
Sbjct: 660 PHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTA 719
Query: 389 IERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK V R
Sbjct: 720 YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQLKVYQNFIDSKEVYR 779
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP-PEMFSGRSG 505
++ + + I + + AL+K+CNHP L SG P +R P E+ + G
Sbjct: 780 ILNGDMQ---IFSGLVALRKICNHPDLF-----SGGPKN------LRGIPDEELEEDQFG 825
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
W + SGKM V+ LL + + R++L S Q LD+ R ++Y YL+
Sbjct: 826 YW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLK 876
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
+DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+ D Q
Sbjct: 877 MDGTTAIASRQPLITRYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQ 935
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F +
Sbjct: 936 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFKS 990
Query: 686 EDLRDLFTF 694
DL +LFT
Sbjct: 991 NDLYELFTL 999
>gi|73997935|ref|XP_534944.2| PREDICTED: DNA excision repair protein ERCC-6 [Canis lupus
familiaris]
Length = 1486
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 266/548 (48%), Gaps = 75/548 (13%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L R L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 498 FLFRKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 549
Query: 237 ---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
F G + IIV PT+++ W E W +A+ T
Sbjct: 550 IRTRGSNYRFKG---LGPTIIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTQKKE 604
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
D +LI SY R+ S +I DE H+++N
Sbjct: 605 KLIRDIAHCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQFRT 663
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L E +++ +F PG LG F + I G A+ + K
Sbjct: 664 PHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTA 723
Query: 389 IERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK V R
Sbjct: 724 YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKEVYR 783
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
++ + + I + + AL+K+CNHP L SG P ++ P + + G
Sbjct: 784 ILNGDMQ---IFSGLVALRKICNHPDLF-----SGGPKN------LKTIPDDDEEDQFGY 829
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
W + SGKM V+ LL + + R++L S Q LD+ R ++Y YL++
Sbjct: 830 W--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKM 880
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+ D QA
Sbjct: 881 DGTTAIASRQPLITRYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQA 939
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F +
Sbjct: 940 RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFKSN 994
Query: 687 DLRDLFTF 694
DL +LFT
Sbjct: 995 DLYELFTL 1002
>gi|355782760|gb|EHH64681.1| hypothetical protein EGM_17967 [Macaca fascicularis]
Length = 1495
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 501 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 552
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 553 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 607
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 608 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 666
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 667 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 726
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 727 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 786
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 787 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 832
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 833 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 883
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 884 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 942
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 943 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 997
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 998 FKSNDLYELFTL 1009
>gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1496
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 502 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 553
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 554 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 608
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 609 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 667
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 668 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 727
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 728 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 787
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 788 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 833
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 834 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 884
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 885 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 943
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 944 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 998
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 999 FKSNDLYELFTL 1010
>gi|402880149|ref|XP_003903675.1| PREDICTED: DNA excision repair protein ERCC-6 [Papio anubis]
Length = 1494
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 500 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 551
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 552 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 606
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 607 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 665
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 666 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 725
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 726 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 785
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 786 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 831
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 832 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 882
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 883 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 941
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 942 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 996
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 997 FKSNDLYELFTL 1008
>gi|355562411|gb|EHH19005.1| hypothetical protein EGK_19625 [Macaca mulatta]
Length = 1493
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 550
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 551 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 605
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 606 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 664
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 665 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 724
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 725 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 784
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 785 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 830
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 831 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 881
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 882 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 940
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 941 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 995
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 996 FKSNDLYELFTL 1007
>gi|426255946|ref|XP_004021608.1| PREDICTED: DNA excision repair protein ERCC-6 [Ovis aries]
Length = 1481
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 271/558 (48%), Gaps = 94/558 (16%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L R L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 492 FLFRKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 543
Query: 237 ---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
F+G + IIV PT+++ W E W R V+
Sbjct: 544 IRTRGSNYRFEG---LGPTIIVCPTTVMHQWVKEFHTW----------WPPFRVAVLHET 590
Query: 288 DSFT--------DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
SFT D +LI SY R+ S +I DE H+++N
Sbjct: 591 GSFTHKKERLVRDIAHCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAIT 649
Query: 340 -------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+N+L E +++ +F PG LG F + I G A
Sbjct: 650 LACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNA 709
Query: 381 TEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F
Sbjct: 710 SPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF 769
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I SK V R ++ E + I + + AL+K+CNHP L SG P + ++ P E
Sbjct: 770 IDSKEVYRILNGEMQ---IFSGLVALRKICNHPDLF-----SGGPKS------LKGAPDE 815
Query: 499 MFSGRSGSWTGGD--GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
G D G W + SGKM V+ LL + + R++L S Q LD+
Sbjct: 816 EL--------GEDEFGYW-KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFL 865
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R ++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DP
Sbjct: 866 RAQKYSYLKMDGTTAIASRQPLIARYNEDT-SVFVFLLTTRVGGLGVNLTGANRVIIYDP 924
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++
Sbjct: 925 DWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD----- 979
Query: 677 ATQGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 980 PKQRRFFKSNDLYELFTL 997
>gi|383416487|gb|AFH31457.1| DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1495
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 501 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 552
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 553 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 607
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 608 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 666
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 667 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 726
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 727 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 786
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 787 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 832
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 833 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 883
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 884 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 942
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 943 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 997
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 998 FKSNDLYELFTL 1009
>gi|397475294|ref|XP_003809078.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan paniscus]
Length = 1491
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 497 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 548
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 549 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 603
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 604 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 662
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 663 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 722
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 723 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 782
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 783 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 828
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 829 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 879
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 880 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 938
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 939 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 993
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 994 FKSNDLYELFTL 1005
>gi|291233864|ref|XP_002736872.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Saccoglossus
kowalevskii]
Length = 1503
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 276/558 (49%), Gaps = 73/558 (13%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+GG +P V L ++ Q+ GV++++E G I+ D+MGLGKT+Q I
Sbjct: 520 EGGLKIPGQVWCKLYKY----QKTGVKWLWEL------HCQQTGGIVGDEMGLGKTIQII 569
Query: 227 ALL----YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRD 281
+ L Y+ L D + +IV PT+++ W E W RV + S
Sbjct: 570 SFLSGLKYSKLQIKGDKYIGLGPVLIVCPTTVMHQWVREFHTWYPDFRVAIFHDSGSYSG 629
Query: 282 DVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN- 339
S + D S VL+ SY R+ D +I DE H+++N D +T
Sbjct: 630 SKASLV---YDIVKSRGVLVTSYAAVRIQQDML-LRYQWDYVILDEGHKIRNPDADVTQA 685
Query: 340 -----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATE 382
+N+L E +++ +F PG LG F + + I G A++
Sbjct: 686 CKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMQEFSVPITMGGYSNASD 745
Query: 383 EEKKLGIERSSELSAKVNQFILRRT--NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
+ + + + L +N ++LRR + ++ +LP K +V+ C+LTP Q ++Y +I
Sbjct: 746 VQVQTAYKCACVLRDTINPYLLRRMKQDVKVNLNLPDKNEQVLFCRLTPEQVDVYKEYID 805
Query: 441 SKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP----GTTGFEDCIRFFP 496
S + T + K+ A + L+K+CNHP I +G P G +D I P
Sbjct: 806 SGECHAIL---TGRYKVFAGLITLRKICNHP-----DISTGGPRVLKGDYEHDDDI---P 854
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
EM R G W + SGK+ V+ LL L ++ R++L + Q LD+
Sbjct: 855 EEM---RYGYW--------KKSGKLIVIESLL-KLWKKQGHRVLLFTQSKQMLDILDSFV 902
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R Y Y+R+DG+T IS RQ VN FN K+ FVFLL+++ GG G+NLIG +R+V++DP
Sbjct: 903 TSRGYNYMRMDGSTPISSRQPAVNRFNQ-DKSVFVFLLTTRVGGLGVNLIGADRVVIYDP 961
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNP+ D QA R WR GQ K+V IYR L++GTIEEK+Y RQ+ K+ L + ++
Sbjct: 962 DWNPSTDMQARERAWRIGQNKQVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKD----- 1016
Query: 677 ATQGNFLSTEDLRDLFTF 694
Q F T DL +LFT
Sbjct: 1017 PKQRRFFKTNDLHELFTL 1034
>gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens]
Length = 1356
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 550
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 551 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 605
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 606 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 664
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 665 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 724
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 725 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 784
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 785 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 830
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 831 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 881
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 882 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 940
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 941 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 995
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 996 FKSNDLYELFTL 1007
>gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens]
gi|416959|sp|Q03468.1|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName:
Full=ATP-dependent helicase ERCC6; AltName: Full=Cockayne
syndrome protein CSB
gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens]
gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens]
gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens]
Length = 1493
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 550
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 551 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 605
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 606 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 664
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 665 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 724
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 725 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 784
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 785 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 830
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 831 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 881
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 882 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 940
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 941 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 995
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 996 FKSNDLYELFTL 1007
>gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
[Pongo abelii]
Length = 1493
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 550
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 551 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 605
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 606 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 664
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 665 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASSVQV 724
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 725 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 784
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 785 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 830
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 831 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 881
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 882 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 940
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 941 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 995
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 996 FKSNDLYELFTL 1007
>gi|350592895|ref|XP_003483566.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1481
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 268/558 (48%), Gaps = 94/558 (16%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 491 FLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 542
Query: 237 ---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
F+G + IIV PT+++ W E W R ++
Sbjct: 543 IRTRGSNYRFEG---LGPTIIVCPTTVMHQWVKEFHTW----------WPPFRVAILHET 589
Query: 288 DSFTDPCSSL--------QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
SFT L +LI SY R+ S +I DE H+++N
Sbjct: 590 GSFTHKKEKLVRDIAHCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAIT 648
Query: 340 -------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+N+L E +++ +F PG LG F + I G A
Sbjct: 649 LACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNA 708
Query: 381 TEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F
Sbjct: 709 SPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF 768
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
I SK V R ++ E + I + + AL+K+CNHP L SG P
Sbjct: 769 IDSKEVYRILNGEMQ---IFSGLVALRKICNHPDLF-----SGGPKN------------- 807
Query: 499 MFSGRSGSWTGGD--GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
F G G D G W + SGKM V+ LL + + R++L S Q LD+
Sbjct: 808 -FKGIPGEELEEDQFGYW-KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFL 864
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R ++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DP
Sbjct: 865 RAQKYSYLKMDGTTTIASRQPLITRYNEDA-SIFVFLLTTRVGGLGVNLTGANRVIIYDP 923
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++
Sbjct: 924 DWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD----- 978
Query: 677 ATQGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 979 PKQRRFFKSNDLYELFTL 996
>gi|380796601|gb|AFE70176.1| DNA excision repair protein ERCC-6, partial [Macaca mulatta]
Length = 1101
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 107 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 158
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 159 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 213
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 214 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 272
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 273 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 332
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 333 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 392
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 393 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 438
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 439 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 489
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 490 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 548
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 549 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 603
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 604 FKSNDLYELFTL 615
>gi|117558161|gb|AAI27105.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
Length = 1493
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 550
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 551 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 605
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 606 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 664
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 665 FCTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 724
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 725 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 784
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 785 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 830
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 831 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 881
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 882 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 940
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 941 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 995
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 996 FKSNDLYELFTL 1007
>gi|126272865|ref|XP_001366076.1| PREDICTED: DNA excision repair protein ERCC-6 [Monodelphis domestica]
Length = 1492
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 273/554 (49%), Gaps = 79/554 (14%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 493 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 544
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDV 283
F+G + +IV PT+++ W E W RV ++ S +
Sbjct: 545 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVREFHTWWPPFRVAILHETGSYTNKK 601
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
V I C +LI SY R+ + + +I DE H+++N
Sbjct: 602 VKLIQEIAR-CHG--ILITSYSYIRLMQDNIN-NHDWHYVILDEGHKIRNPNAAVTLACK 657
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+N+L+E +++ +F PG LG F + I G A+ +
Sbjct: 658 QFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ 717
Query: 385 KKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK 442
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK
Sbjct: 718 VKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQRKVYQNFIDSK 777
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF-- 500
V R ++ E + + + + AL+K+CNHP L SG P I+ P +
Sbjct: 778 EVYRILNGEMQ---VFSGLVALRKICNHPDLF-----SGGP------KIIKGIPDDELEE 823
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+ + G W + SGKM V+ LL + + R++L S Q L L R R
Sbjct: 824 ADQFGYW--------KRSGKMIVVESLL-KIWHKQGHRVLLFSQSRQMLHLLEVFLRARD 874
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP
Sbjct: 875 YSYLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNP 933
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L I ++ Q
Sbjct: 934 STDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKD-----PKQR 988
Query: 681 NFLSTEDLRDLFTF 694
F + DL +LFT
Sbjct: 989 RFFKSNDLYELFTL 1002
>gi|426364707|ref|XP_004049439.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Gorilla gorilla gorilla]
Length = 1493
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 550
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 551 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 605
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 606 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 664
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 665 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 724
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK
Sbjct: 725 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKE 784
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 785 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 830
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 831 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYS 881
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+V++DPDWNP+
Sbjct: 882 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPST 940
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 941 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 995
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 996 FKSNDLYELFTL 1007
>gi|156344365|ref|XP_001621159.1| hypothetical protein NEMVEDRAFT_v1g145813 [Nematostella vectensis]
gi|156206838|gb|EDO29059.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 160/229 (69%), Gaps = 18/229 (7%)
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETK------QSKILAYITALKKLCNHPKLI 474
+VVCC+LTPLQ+ +Y IHSK +K ++E +K + L +IT+LKKLCNHP+LI
Sbjct: 7 QVVCCRLTPLQTAIYKRLIHSKALKIKLAEGSKGKPGGVSTSSLGFITSLKKLCNHPELI 66
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR 534
Y+ + + G G +R P+ F ++ ELSGKM VL +L +
Sbjct: 67 YEKAQMEDEGFEG----VREMFPQKFDLKN--------VQPELSGKMQVLDYILAVTKAT 114
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLL 594
+DD++VLVSNYTQTLDLF +LCR+RRY ++RLDG+ SI KRQK+V+ FNDP +F+F+L
Sbjct: 115 SDDKVVLVSNYTQTLDLFEKLCRQRRYQHVRLDGSMSIKKRQKIVDRFNDPKGGDFIFML 174
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
SSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK+ R
Sbjct: 175 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKKASYRR 223
>gi|224098212|ref|XP_002194690.1| PREDICTED: DNA excision repair protein ERCC-6-like [Taeniopygia
guttata]
Length = 1170
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 285/566 (50%), Gaps = 76/566 (13%)
Query: 182 RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKP 241
R L HQREGV F++ L+ G ILADDMGLGKT+Q IA L + FD +
Sbjct: 101 RKLFQHQREGVAFLYR-----LHRERKPGGILADDMGLGKTIQVIAFLSGM----FDAE- 150
Query: 242 MVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---ALCESTRD-DVVSGIDSFTDPCSS 296
+++ +++ PT+LVS+W AE +W G RV+ + E TR+ + V + +S
Sbjct: 151 LIQHVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLERVQRKNGIV--ITS 208
Query: 297 LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------------- 340
Q+LI +++ +S+ D +I DEAH++K T +
Sbjct: 209 YQMLINNWKQL---ASRHEQEFVWDYIILDEAHKIKCPSNKTTKCVYAIPAHYRILLTGT 265
Query: 341 ---NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
N+L E +++ +F G +LG A F+ YE I RE AT EK LG++ S L
Sbjct: 266 PVQNNLREMWSLFDFACQGSLLGTAKTFKMEYENPITRAREKDATPGEKALGLKISENLM 325
Query: 397 AKVNQFILRRTNALLSNH-------------------LPPKIIE----VVCCKLTPLQSE 433
+ + + LRRT + + + P + VV L P+Q E
Sbjct: 326 SIIKPYFLRRTKEDIKKYHADKADSPLSEDPSENKAPVMPSLTRKNDFVVWVYLAPVQEE 385
Query: 434 LYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR 493
+Y +F+ +VK + LA +T LKKLC+HP+L+ T G ED +
Sbjct: 386 IYRNFLCLDHVKEVL---MMNRSPLAELTILKKLCDHPRLL-STRACTQLGLEEEEDSEQ 441
Query: 494 FFPPE--MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
+ E MFSG++ D +E SGKM L LL LR+ R ++ S + LD+
Sbjct: 442 DYRMEAIMFSGKNKIDHLSDETVIEESGKMQFLVGLLERLREE-GHRTLVFSQSRKMLDI 500
Query: 552 FAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ R++ LR+DGT T +++R++ +N F + VFLL+++ GG G+ L +R
Sbjct: 501 IELVLSRRQFQILRIDGTVTHLTERERRINAFQTNTTYS-VFLLTTQVGGVGITLTAASR 559
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
+V+FDP WNPA D QA R +R GQK+ V IYR ++ GT+EEK+Y+RQ+ K+ L +
Sbjct: 560 VVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIR---- 615
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHD 696
+ T + S ++LR+LF D
Sbjct: 616 QTTGDKKNPFRYFSKQELRELFILED 641
>gi|403294498|ref|XP_003938220.1| PREDICTED: uncharacterized protein LOC101030049 [Saimiri
boliviensis boliviensis]
Length = 1550
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 185/609 (30%), Positives = 292/609 (47%), Gaps = 106/609 (17%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG QF++ IHG CIL DDMGLGKT+
Sbjct: 110 SDDGDSIPYTIN----RYLRDYQREGAQFLY--------GHYIHGRGCILGDDMGLGKTV 157
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P A +IV P S++ NW+ E+
Sbjct: 158 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPSSSTAKKMFLIVAPLSVLYNWKDEL 217
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 218 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 269
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG +Y
Sbjct: 270 IIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSNSY 329
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 330 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 389
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 390 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCSSGRKRRNCCYKTNSHGETVKTLYLSY 449
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ D A+ LS
Sbjct: 450 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPDFVQK------TKDAAFETLS 503
Query: 519 -----GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T
Sbjct: 504 DPKYSGKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSE 562
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+R K+V FN +++ V L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R
Sbjct: 563 ERLKIVKEFNS-TQDVNVCLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRI 621
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRD 690
GQ + V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +
Sbjct: 622 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGE 678
Query: 691 LFTFHDDVR 699
LF H+ R
Sbjct: 679 LFGTHNLFR 687
>gi|281346214|gb|EFB21798.1| hypothetical protein PANDA_016920 [Ailuropoda melanoleuca]
Length = 1488
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 268/556 (48%), Gaps = 83/556 (14%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALL------- 229
L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L
Sbjct: 493 FLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 544
Query: 230 ---------YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
LLC+ F G + IIV PT+++ W E W +A+ T
Sbjct: 545 IRTRGSNYRQVLLCRLFKG---LGPTIIVCPTTVMHQWVKEFHTWWPPF--RVAILHETG 599
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN- 339
D +LI SY R+ S +I DE H+++N
Sbjct: 600 SYTQKKEKLIRDIAHCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTL 658
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
+N+L E +++ +F PG LG F + I G A+
Sbjct: 659 ACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNAS 718
Query: 382 EEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
+ K + + L +N ++LRR ++ +S LP K +V+ C+LT Q +Y +FI
Sbjct: 719 PVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHRVYQNFI 778
Query: 440 HSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP-E 498
SK V R ++ + + I + + AL+K+CNHP L SG P + P E
Sbjct: 779 DSKEVYRILNGDMQ---IFSGLVALRKICNHPDLF-----SGGPKNP------KDIPDGE 824
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
+ + G W + SGKM V+ LL + + R++L S Q LD+ R
Sbjct: 825 LEEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRA 875
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDW
Sbjct: 876 QKYSYLKMDGTTAIASRQPLITRYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDW 934
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NP+ D QA R WR GQKK+V +YR L+ GTIEEK++ RQ+ K+ L + ++
Sbjct: 935 NPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKD-----PK 989
Query: 679 QGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 990 QRRFFKSNDLYELFTL 1005
>gi|403276713|ref|XP_003930033.1| PREDICTED: DNA excision repair protein ERCC-6 [Saimiri boliviensis
boliviensis]
Length = 1492
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 269/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 498 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 549
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + +IV PT+++ W E W +A+ T
Sbjct: 550 YSKIRTRGSNYRFEG---LGPTVIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTH 604
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 605 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQ 663
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 664 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFLEQFSVPITMGGYSNASPVQV 723
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK
Sbjct: 724 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKE 783
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSG 502
V R ++ E + I + + AL+K+CNHP L SG P G D E+
Sbjct: 784 VYRILNGEMQ---IFSGLIALRKICNHPDLF-----SGGPKNLKGLPD------DELEED 829
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + + R++L S Q LD+ R ++Y
Sbjct: 830 QFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYT 880
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+
Sbjct: 881 YLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPST 939
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 940 DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 994
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 995 FKSNDLYELFTL 1006
>gi|148684275|gb|EDL16222.1| stretch responsive protein 278, isoform CRA_a [Mus musculus]
Length = 708
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 294/604 (48%), Gaps = 103/604 (17%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFE-CVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 117 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIEG-------RGCILGDDMGLGKTIQ 165
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M KK +IV P S++ NW+ E+
Sbjct: 166 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDT 225
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ + + ++ + +YET R+ + + E +I
Sbjct: 226 W--GYFRVTVLHGSKKDNELLRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 277
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG +F+
Sbjct: 278 VDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFK 337
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V C
Sbjct: 338 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYC 397
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 398 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSRGDTVRTLCLSYLT 457
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L+K+ NH L+ S + T C R F P+ D A+ LS
Sbjct: 458 VLQKIANHVALLQAASTSKHQETVIKRICDRVFSRFPDFVQ------KSKDAAFETLSDP 511
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM VL +LL H R++ D +++L S T+ LD+ Q C Y RLDG+T +R
Sbjct: 512 KYSGKMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEER 570
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN S++ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ
Sbjct: 571 LKIVKEFNS-SQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQ 629
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLF 692
+ V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF
Sbjct: 630 CRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHRGELF 686
Query: 693 TFHD 696
H+
Sbjct: 687 GVHN 690
>gi|363744474|ref|XP_425043.3| PREDICTED: chromosome Z open reading frame, human C9orf102 [Gallus
gallus]
Length = 691
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 302/625 (48%), Gaps = 104/625 (16%)
Query: 149 LPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGI 208
LP D L +D G+ +P T++ R+LR +QREG QF++ + A
Sbjct: 90 LPSSTDAFKL-------SDNGDFIPYTIN----RYLRGYQREGAQFLY------WHYANK 132
Query: 209 HGCILADDMGLGKTLQSIALLYTLLCQG------------FDGKPMVKKA--------II 248
GCIL DDMGLGKT+Q I+ L +L + F + M K++ +I
Sbjct: 133 RGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLQRTMKKESKCNPKKTFLI 192
Query: 249 VTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFR 308
V P S++ NW+ E+ W G ++ L S ++ ++ I +V + +YET R
Sbjct: 193 VAPLSVLYNWKDELDTW--GYFKVSVLHGSKKEGDLNRIKQ-----GKCEVALTTYETLR 245
Query: 309 MHSSKFSCSESCDLLICDEAHRLKN-----DQTLTN--------------RNDLEEFFAM 349
++ + + + +I DE HR+KN QT+ + +N++ E + +
Sbjct: 246 LYLDELN-NIGWSAVIVDEVHRIKNPKSQITQTMKSLKCNVRIGLTGTILQNNMNELWCV 304
Query: 350 VNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNA 409
+++ PG+LG +F++ + + G+ TAT+ E G + +L+ K++ + LRRT
Sbjct: 305 MDWAVPGLLGSRVHFKKKFSDPLERGQRHTATKRELATGRKAMVKLARKMSSWFLRRTKV 364
Query: 410 LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE------------------- 450
L+S+ LP K +V C LT Q +Y + +++V +
Sbjct: 365 LISDQLPKKEDRMVYCSLTEFQKAVYRAVLKTEDVSLVLRAREPCSCNSGRIRKNCCYKI 424
Query: 451 ----ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC---IRFFPPEMFSGR 503
ET +S L+Y+T L+K+ NH L+ S T C FP M +
Sbjct: 425 NSHGETVKSLQLSYLTILQKVANHVALLQTDNTSKQQETHIKRVCNEVFSSFPDFMQLSK 484
Query: 504 SGSW-TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
++ T D + SGKM VL +LL H R + D+++L S T+ LD+ Q C
Sbjct: 485 DAAFETISDPKY---SGKMRVLQQLLNHFR-KNKDKVLLFSFSTKLLDVLEQYCIASGLD 540
Query: 563 YLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
+ RLDG+T R ++V FN P N + L+S+ AGG GLN +G N ++LFDP WNPA
Sbjct: 541 FRRLDGSTKSEDRIRIVREFNRVPEIN--ICLVSTMAGGLGLNFVGANVVILFDPTWNPA 598
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDS--SAT 678
ND QA R +R GQ K V ++R +S GT+EE +Y RQ+ K+ L V+ E A
Sbjct: 599 NDLQAIDRAYRIGQCKDVKVFRLISLGTVEEMMYLRQVYKQQLHCAVVGSENAKRYFKAV 658
Query: 679 QGNFLSTEDLRDLFTFHDDVRSEIH 703
QG S E +LF H+ + H
Sbjct: 659 QG---SKEHQGELFGIHNLFKLRTH 680
>gi|8163804|gb|AAF73858.1|AF217319_1 putative repair and recombination helicase RAD26L [Mus musculus]
Length = 685
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 294/604 (48%), Gaps = 103/604 (17%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 94 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIEG-------RGCILGDDMGLGKTIQ 142
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M KK +IV P S++ NW+ E+
Sbjct: 143 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDT 202
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ + + ++ + +YET R+ + + E +I
Sbjct: 203 W--GYFRVTVLHGSKKDNELLRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 254
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG +F+
Sbjct: 255 VDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFK 314
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V C
Sbjct: 315 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYC 374
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 375 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSRGDTVRTLCLSYLT 434
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L+K+ NH L+ S + T C R F P+ D A+ LS
Sbjct: 435 VLQKIANHVALLQAASTSKHQETVIKRICDRVFSRFPDFVQ------KSKDAAFETLSDP 488
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM VL +LL H R++ D +++L S T+ LD+ Q C Y RLDG+T +R
Sbjct: 489 KYSGKMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEER 547
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN S++ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ
Sbjct: 548 LKIVKEFNS-SQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQ 606
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLF 692
+ V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF
Sbjct: 607 CRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHRGELF 663
Query: 693 TFHD 696
H+
Sbjct: 664 GVHN 667
>gi|91807128|ref|NP_075996.2| RAD26L hypothetical protein isoform 2 [Mus musculus]
gi|172046593|sp|Q9JIM3.2|RAD26_MOUSE RecName: Full=Putative DNA repair and recombination protein
RAD26-like
Length = 699
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 294/604 (48%), Gaps = 103/604 (17%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFE-CVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 108 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIEG-------RGCILGDDMGLGKTIQ 156
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M KK +IV P S++ NW+ E+
Sbjct: 157 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDT 216
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ + + ++ + +YET R+ + + E +I
Sbjct: 217 W--GYFRVTVLHGSKKDNELLRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 268
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG +F+
Sbjct: 269 VDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFK 328
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V C
Sbjct: 329 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYC 388
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 389 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSRGDTVRTLCLSYLT 448
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L+K+ NH L+ S + T C R F P+ D A+ LS
Sbjct: 449 VLQKVANHVALLQAASTSKHQETVIKRICDRVFSRFPDFVQ------KSKDAAFETLSDP 502
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM VL +LL H R++ D +++L S T+ LD+ Q C Y RLDG+T +R
Sbjct: 503 KYSGKMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEER 561
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN S++ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ
Sbjct: 562 LKIVKEFNS-SQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQ 620
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLF 692
+ V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF
Sbjct: 621 CRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHRGELF 677
Query: 693 TFHD 696
H+
Sbjct: 678 GVHN 681
>gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus]
Length = 1157
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 266/553 (48%), Gaps = 78/553 (14%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 171 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 222
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + IIV PT+++ W E W +A+ T
Sbjct: 223 YSKIRTRGSNYRFEG---LGPTIIVCPTTVMHQWVKEFHTWWPPF--RVAVLHETGSYTH 277
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D VLI SY R+ S +I DE H+++N
Sbjct: 278 KKERLIRDIVYCHGVLITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQ 336
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 337 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 396
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK
Sbjct: 397 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKA 456
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE--MFS 501
V R ++ E ++I + + AL+K+CNHP L SG P PPE +
Sbjct: 457 VYRILNGE---NQIFSGLVALRKICNHPDLF-----SGGPKNASG-------PPEDELEE 501
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ G W SGKM V+ LL + R R++L S Q L + R +Y
Sbjct: 502 EQFGHW--------RRSGKMIVVESLL-KIWHRQGQRVLLFSQSRQMLHILEVFLRAHKY 552
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+
Sbjct: 553 SYLKMDGTTTIASRQPLITKYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPS 611
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q
Sbjct: 612 TDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRR 666
Query: 682 FLSTEDLRDLFTF 694
F + DL +LFT
Sbjct: 667 FFKSNDLYELFTL 679
>gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus]
gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [synthetic construct]
Length = 1481
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 268/561 (47%), Gaps = 94/561 (16%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 495 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 546
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + IIV PT+++ W E W R V+
Sbjct: 547 YSKIRTRGSNYRFEG---LGPTIIVCPTTVMHQWVKEFHTW----------WPPFRVAVL 593
Query: 285 SGIDSFTDPCSSL--------QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT 336
S+T L VLI SY R+ S +I DE H+++N
Sbjct: 594 HETGSYTHKKERLIRDIVYCHGVLITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNA 652
Query: 337 LTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGRE 377
+N+L E +++ +F PG LG F + I G
Sbjct: 653 AVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGY 712
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELY 435
A+ + K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y
Sbjct: 713 SNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVY 772
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
+FI SK V R ++ E ++I + + AL+K+CNHP L SG P
Sbjct: 773 QNFIDSKAVYRILNGE---NQIFSGLVALRKICNHPDLF-----SGGPKNASG------- 817
Query: 496 PPE--MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
PPE + + G W SGKM V+ LL + R R++L S Q L +
Sbjct: 818 PPEDELEEEQFGHW--------RRSGKMIVVESLL-KIWHRQGQRVLLFSQSRQMLHILE 868
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
R +Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR+++
Sbjct: 869 VFLRAHKYSYLKMDGTTTIASRQPLITKYNEDT-SIFVFLLTTRVGGLGVNLTGANRVII 927
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
+DPDWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++
Sbjct: 928 YDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-- 985
Query: 674 DSSATQGNFLSTEDLRDLFTF 694
Q F + DL +LFT
Sbjct: 986 ---PKQRRFFKSNDLYELFTL 1003
>gi|242010572|ref|XP_002426039.1| DNA repair and recombination protein RAD26, putative [Pediculus
humanus corporis]
gi|212510049|gb|EEB13301.1| DNA repair and recombination protein RAD26, putative [Pediculus
humanus corporis]
Length = 1206
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 271/543 (49%), Gaps = 69/543 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L +QR GVQ+++E LN G IL D+MGLGKT+Q IA L L +
Sbjct: 342 LFKYQRVGVQWLWE-----LNIQQC-GGILGDEMGLGKTIQIIAFLAGLSVSKLLSRHGY 395
Query: 244 KKAI----IVTPTSLVSNWEAEIKKWV-GGRVQLI---ALCESTRDDVVSGIDSFTDPCS 295
+ + IV PT+++ W E KW RV L+ + D++ I
Sbjct: 396 FRGLGPVLIVCPTTVMHQWVREFHKWWPQFRVALLHESGTYHGKKYDLIKNI------IK 449
Query: 296 SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN--DQTLTN-------------- 339
S +LI SY T SS + +I DE H+++N Q N
Sbjct: 450 SNGILITSYITCLQQSSDLQ-RQKWHYVILDEGHKIRNPDSQIAINIKLLNTPHRLILSG 508
Query: 340 ---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
+N+L+E +++ +F PG LG F + I G A++ + + ++ L
Sbjct: 509 SPIQNNLKELWSLFDFIFPGKLGTLPVFLAEFGVPITQGGYANASKVQVLTAYKCATVLR 568
Query: 397 AKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
++ ++LRR + H LPPK +V+ C+LT Q ELY ++++S +V + +
Sbjct: 569 DTISPYLLRRAKEDVKTHINLPPKNEQVLFCRLTNEQKELYVNYLNSGSVNEIFN---GK 625
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
K+ + L+K+CNHP L SG P +D + F P E + G W
Sbjct: 626 QKLFVGLINLRKICNHPHLY-----SGGPKHVKLDD-LEFIPEE---NKFGYWKK----- 671
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
+GKM V+ LL + ++ R+++ + + L + + Y YL+LDGTT+I
Sbjct: 672 ---AGKMIVMETLL-KIWKKQGHRVLIFTQSRKMLSILENFVLSQNYEYLKLDGTTNIGS 727
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ L+N FN+ K ++FL ++ GG G+NL G NR+V++DPDWNPA D QA R WR G
Sbjct: 728 RQPLINKFNEEKK-YYIFLSTTHVGGLGVNLTGANRVVIYDPDWNPATDMQARERAWRIG 786
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
Q+ +V IYR +++GTIEEK+Y RQ+ K+ L + ++ +Q F + DL +LFT+
Sbjct: 787 QENQVTIYRLVTSGTIEEKIYHRQIFKQFLTNKVLKD-----PSQRRFFKSNDLYELFTY 841
Query: 695 HDD 697
DD
Sbjct: 842 KDD 844
>gi|426362392|ref|XP_004048351.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Gorilla gorilla gorilla]
Length = 701
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 292/601 (48%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++ IHG CIL DDMGLGKT+
Sbjct: 109 SDDGDSIPYTIN----RYLRDYQREGTRFLY--------GHYIHGGGCILGDDMGLGKTV 156
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P+ A +IV P S++ NW+ E+
Sbjct: 157 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDEL 216
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 217 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 268
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG Y
Sbjct: 269 VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTY 328
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
FR+ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 329 FRKQFSDPVEHGQRHTATKRELATGRKAMQRLAEKMSGWFLRRTKTLIKDQLPKKEDRMV 388
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 389 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 448
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 449 LTVLQKVANHVALLQAASTSKQQDTLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 507
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 508 GKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 567 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 625
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 626 VKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 682
Query: 696 D 696
+
Sbjct: 683 N 683
>gi|337743289|gb|AEI73141.1| RAD54L [Kryptolebias marmoratus]
Length = 283
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 181/333 (54%), Gaps = 62/333 (18%)
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
CNHP LIYD G G FE + FPP FS ++ +LSGKM VL +
Sbjct: 1 CNHPALIYDRCVEGEEG---FEGALNLFPPG-FSLKAVE--------PQLSGKMLVLDYI 48
Query: 528 LGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSK 587
L R T D++VLVSNYTQTLDLF +L Y Y+RLDGT SI KR K+V FN P
Sbjct: 49 LAMTRTTTSDKVVLVSNYTQTLDLFEKL-----YLYVRLDGTMSIKKRAKIVERFNSPHN 103
Query: 588 NEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 647
EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK +IYR LST
Sbjct: 104 PEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLST 163
Query: 648 GTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
GTIEEK+ QRQ K+ L + E+ D S +LR+LFT ++ S+ H+
Sbjct: 164 GTIEEKILQRQAHKKALSSCVVDEEQDVE----RHFSLGELRELFTLNEGTASDTHDKFR 219
Query: 708 CTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEKQLGTPL 767
C RC N G E ++++ +
Sbjct: 220 CRRCVN---GREVRPPAEDSDCTS------------------------------------ 240
Query: 768 EEDLNNWGHHFYSMSVPDAILQASAGDEVTFVF 800
DL+ W H + D +L+AS V+FVF
Sbjct: 241 --DLSQWNHCLDKKGLRDQVLKASWDAAVSFVF 271
>gi|326670150|ref|XP_689596.5| PREDICTED: hypothetical protein LOC553504 [Danio rerio]
Length = 1269
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 288/595 (48%), Gaps = 91/595 (15%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP T++ R+LR +QREG++F+++ N A GCIL DDMGLGKT+Q I L
Sbjct: 52 VPYTIN----RYLRDYQREGIKFIYQ------NYAKSRGCILGDDMGLGKTVQVIGFLAA 101
Query: 232 LLCQG--------------FDGKP---MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
+L + KP + K +IV P S++ NW+ E+ W G +++
Sbjct: 102 VLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTW--GHFRVVV 159
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
+ +D+ ++ + ++ + +YET R+ +F+ S + +I DEAH++KN
Sbjct: 160 VHGVRKDEELARVQR-----GRCEIALTTYETLRLCLDQFN-SINWAAVIVDEAHKIKNH 213
Query: 335 QT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
++ LT +N+LEE + ++N+ P LG F+ + I G
Sbjct: 214 KSKITQAVKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGSLGAFKNRFSDPIEKG 273
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
++ T T+ G + EL+ K++++ LRRT +L+S+ LP K VV C LT Q +Y
Sbjct: 274 QKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLISDQLPKKDDRVVYCSLTDFQRTVY 333
Query: 436 NHFIHSKNVKRAISEETK-----------------------QSKILAYITALKKLCNHPK 472
+ S +V + K + +Y+ L+K+ NH
Sbjct: 334 RAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLNADGVPVRHLYFSYLAILRKVANHVA 393
Query: 473 LIYD----TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLL 528
L+ + K TT E R FP F+ R + SGKM V+ +LL
Sbjct: 394 LLQSKDGTSKKQEKYVTTICEQVFRKFPD--FTERCKQAAFEAMSDPMYSGKMKVMQKLL 451
Query: 529 GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
H + D+++L S T+ LD+ C Y RLDG T R K+V FN S++
Sbjct: 452 NHFIAK-KDKVLLFSLSTKLLDVLESYCMAEGLEYHRLDGNTKSKDRVKIVKEFNS-SRD 509
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
+ L+S+ AGG GLN IG N +VLFDP WNPAND QA RV+R GQ + V ++R +S G
Sbjct: 510 VNLCLVSTLAGGLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLISLG 569
Query: 649 TIEEKVYQRQMSKEGLQ-KVIQQEQTDS--SATQGNFLSTEDL---RDLFTFHDD 697
T+EE +Y RQ+ K+ LQ VI QE A QG +L R+LF D
Sbjct: 570 TVEEIIYLRQVYKQQLQSSVIGQENARRYFEAVQGTDGYAGELFGIRNLFRLQTD 624
>gi|61402625|gb|AAH91795.1| LOC553504 protein, partial [Danio rerio]
Length = 1069
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 288/595 (48%), Gaps = 91/595 (15%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP T++ R+LR +QREG++F+++ N A GCIL DDMGLGKT+Q I L
Sbjct: 50 VPYTIN----RYLRDYQREGIKFIYQ------NYAKSRGCILGDDMGLGKTVQVIGFLAA 99
Query: 232 LLCQG--------------FDGKP---MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
+L + KP + K +IV P S++ NW+ E+ W G +++
Sbjct: 100 VLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTW--GHFRVVV 157
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
+ +D+ ++ + ++ + +YET R+ +F+ S + +I DEAH++KN
Sbjct: 158 VHGVRKDEELARVQR-----GRCEIALTTYETLRLCLDQFN-SINWAAVIVDEAHKIKNH 211
Query: 335 QT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
++ LT +N+LEE + ++N+ P LG F+ + I G
Sbjct: 212 KSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGSLGAFKNRFSDPIEKG 271
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
++ T T+ G + EL+ K++++ LRRT +L+S+ LP K VV C LT Q +Y
Sbjct: 272 QKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLISDQLPKKDDRVVYCSLTDFQRTVY 331
Query: 436 NHFIHSKNVKRAISEETK-----------------------QSKILAYITALKKLCNHPK 472
+ S +V + K + +Y+ L+K+ NH
Sbjct: 332 RAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLNADGVPVRHLYFSYLAILRKVANHVA 391
Query: 473 LIYD----TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLL 528
L+ + K TT E R FP F+ R + SGKM V+ +LL
Sbjct: 392 LLQSKDGTSKKQEKYVTTICEQVFRKFPD--FTERCKQAAFEAMSDPMYSGKMKVMQKLL 449
Query: 529 GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
H + D+++L S T+ LD+ C Y RLDG T R K+V FN S++
Sbjct: 450 NHFIAK-KDKVLLFSLSTKLLDVLESFCMAEGLEYHRLDGNTKSKDRVKIVKEFNS-SRD 507
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
+ L+S+ AGG GLN IG N +VLFDP WNPAND QA RV+R GQ + V ++R +S G
Sbjct: 508 VNLCLVSTLAGGLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLISLG 567
Query: 649 TIEEKVYQRQMSKEGLQ-KVIQQEQTDS--SATQGNFLSTEDL---RDLFTFHDD 697
T+EE +Y RQ+ K+ LQ VI QE A QG +L R+LF D
Sbjct: 568 TVEEIIYLRQVYKQQLQSSVIGQENARRYFEAVQGTDGYAGELFGIRNLFRLQTD 622
>gi|124481796|gb|AAI33116.1| LOC553504 protein [Danio rerio]
Length = 1105
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 288/595 (48%), Gaps = 91/595 (15%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP T++ R+LR +QREG++F+++ N A GCIL DDMGLGKT+Q I L
Sbjct: 50 VPYTIN----RYLRDYQREGIKFIYQ------NYAKSRGCILGDDMGLGKTVQVIGFLAA 99
Query: 232 LLCQG--------------FDGKP---MVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
+L + KP + K +IV P S++ NW+ E+ W G +++
Sbjct: 100 VLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTW--GHFRVVV 157
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
+ +D+ ++ + ++ + +YET R+ +F+ S + +I DEAH++KN
Sbjct: 158 VHGVRKDEELARVQR-----GRCEIALTTYETLRLCLDQFN-SINWAAVIVDEAHKIKNH 211
Query: 335 QT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
++ LT +N+LEE + ++N+ P LG F+ + I G
Sbjct: 212 KSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGSLGAFKNRFSDPIEKG 271
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
++ T T+ G + EL+ K++++ LRRT +L+S+ LP K VV C LT Q +Y
Sbjct: 272 QKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLISDQLPKKDDRVVYCSLTDFQRTVY 331
Query: 436 NHFIHSKNVKRAISEETK-----------------------QSKILAYITALKKLCNHPK 472
+ S +V + K + +Y+ L+K+ NH
Sbjct: 332 RAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLNADGVPVRHLYFSYLAILRKVANHVA 391
Query: 473 LIYD----TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLL 528
L+ + K TT E R FP F+ R + SGKM V+ +LL
Sbjct: 392 LLQSKDGTSKKQEKYVTTICEQVFRKFPD--FTERCKQAAFEAMSDPMYSGKMKVMQKLL 449
Query: 529 GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
H + D+++L S T+ LD+ C Y RLDG T R K+V FN S++
Sbjct: 450 NHFIAK-KDKVLLFSLSTKLLDVLESYCMAEGLEYHRLDGNTKSKDRVKIVKEFNS-SRD 507
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
+ L+S+ AGG GLN IG N +VLFDP WNPAND QA RV+R GQ + V ++R +S G
Sbjct: 508 VNLCLVSTLAGGLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLISLG 567
Query: 649 TIEEKVYQRQMSKEGLQ-KVIQQEQTDS--SATQGNFLSTEDL---RDLFTFHDD 697
T+EE +Y RQ+ K+ LQ VI QE A QG +L R+LF D
Sbjct: 568 TVEEIIYLRQVYKQQLQSSVIGQENARRYFEAVQGTDGYAGELFGIRNLFRLQTD 622
>gi|119613041|gb|EAW92635.1| RAD26L hypothetical protein, isoform CRA_a [Homo sapiens]
Length = 700
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 292/601 (48%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++ IHG CIL DDMGLGKT+
Sbjct: 109 SDNGDSIPYTIN----RYLRDYQREGTRFLY--------GHYIHGGGCILGDDMGLGKTV 156
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P+ A +IV P S++ NW+ E+
Sbjct: 157 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDEL 216
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 217 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 268
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG Y
Sbjct: 269 VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTY 328
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 329 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 388
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 389 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKTLYLSY 448
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 449 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 507
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 508 GKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 567 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 625
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 626 VKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 682
Query: 696 D 696
+
Sbjct: 683 N 683
>gi|58219008|ref|NP_001010895.1| putative DNA repair and recombination protein RAD26-like [Homo
sapiens]
gi|74756405|sp|Q5T890.1|RAD26_HUMAN RecName: Full=Putative DNA repair and recombination protein
RAD26-like
gi|187954497|gb|AAI40703.1| Chromosome 9 open reading frame 102 [Homo sapiens]
Length = 712
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 292/601 (48%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++ IHG CIL DDMGLGKT+
Sbjct: 120 SDNGDSIPYTIN----RYLRDYQREGTRFLY--------GHYIHGGGCILGDDMGLGKTV 167
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P+ A +IV P S++ NW+ E+
Sbjct: 168 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDEL 227
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 228 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 279
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG Y
Sbjct: 280 VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTY 339
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 340 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 399
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 400 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKTLYLSY 459
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 460 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 518
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 519 GKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 577
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 578 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 636
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 637 VKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 693
Query: 696 D 696
+
Sbjct: 694 N 694
>gi|390457773|ref|XP_002742800.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Callithrix jacchus]
Length = 912
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 184/605 (30%), Positives = 292/605 (48%), Gaps = 105/605 (17%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG QF++ IHG CIL DDMGLGKT+
Sbjct: 321 SDDGDSIPYTIN----RYLRDYQREGAQFLY--------GHYIHGRGCILGDDMGLGKTV 368
Query: 224 QSIALLYTLL-----------------CQGFDGKP---MVKKAIIVTPTSLVSNWEAEIK 263
Q I+ L +L + + +P K +IV P S++ NW+ E+
Sbjct: 369 QVISFLAAVLQKKGTREDIENNMPEFLLRSMNKEPSSTAKKIFLIVAPLSVLYNWKDELD 428
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
W G ++ L + +D+ + + ++ + +YET R+ + + E +
Sbjct: 429 TW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSVE-WSAV 480
Query: 324 ICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
I DEAHR+KN + +N+++E + ++++ PG+LG +YF
Sbjct: 481 IVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSNSYF 540
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 541 KKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVY 600
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYI 461
C LT Q +Y + +++V + ET ++ L+Y+
Sbjct: 601 CSLTDFQKAVYQTVLETEDVTLILQSSEPCTCSSGRKRRNCCYKTNSHGETVKTLYLSYL 660
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS- 518
T L+K+ NH L+ S T C + F P+ D A+ LS
Sbjct: 661 TVLQKVANHVALLQAVSTSKQQETLIKRICDQVFSRFPDFVQKTK------DAAFETLSD 714
Query: 519 ----GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +
Sbjct: 715 PKYSGKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEE 773
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
R K+V FN +++ + L+S+ AGG GLN IG N +VLFDP WNPAND QA R +R G
Sbjct: 774 RLKIVKEFNS-TQDVNICLVSTMAGGLGLNFIGANVVVLFDPTWNPANDLQAIDRAYRIG 832
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDL 691
Q + V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +L
Sbjct: 833 QCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGEL 889
Query: 692 FTFHD 696
F H+
Sbjct: 890 FGIHN 894
>gi|327263495|ref|XP_003216555.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Anolis carolinensis]
Length = 756
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 186/606 (30%), Positives = 291/606 (48%), Gaps = 100/606 (16%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G+ +P T++ R+LR +QREG QF+ + GCIL DDMGLGKT+Q I+
Sbjct: 103 GHQIPYTIN----RYLRDYQREGAQFLHG------HYVRKRGCILGDDMGLGKTVQVISF 152
Query: 229 LYTLLCQG--------------------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
L +L + P K +IV+P S++ NW+ E+ W G
Sbjct: 153 LAAMLNKKGARADIENNMPEFLRTMKNEMSSVPK-KIFLIVSPLSVLYNWKDELDTW--G 209
Query: 269 RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEA 328
++I L + +D ++ I ++ + +YET R+ + + E +I DE
Sbjct: 210 YFKVIVLHGNKKDYELNRIKK-----GKCEIALTTYETLRLFLDELNSLE-WSAVIVDEV 263
Query: 329 HRLKN-----DQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
HR+KN QT+ +N+++E + ++++ PG+LG+ A F++ +
Sbjct: 264 HRIKNPKAQITQTMKALTCKVRLGLTGTILQNNMKELWCVMDWAVPGLLGNEARFKKEFS 323
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
+ G+ TAT+ E G + +L+ +++ + LRRT AL+++ LP K +V C LT
Sbjct: 324 DPVEHGQRHTATKRELATGRKAMQKLAKQMSGYFLRRTKALINDQLPKKEDRMVYCSLTE 383
Query: 430 LQSELYNHFIHSKNV-----------------------KRAISEETKQSKILAYITALKK 466
Q +Y + +++V K + ET Q+ +Y+T L+K
Sbjct: 384 FQRAVYKAVLETEDVRLVLQARKPCSCNSGRKRKNCCYKTNVHGETMQALYFSYLTILRK 443
Query: 467 LCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE------LSGK 520
+ NH L+ S E IR E+FS A E SGK
Sbjct: 444 IANHTGLLQIDNTSKQQ-----EAHIRRVCEEVFSKFPDFVQLSKDAAFETISDPKYSGK 498
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL H R + D+++L S T+ LD+ Q C Y RLDG T R K+V
Sbjct: 499 MKVLQKLLNHFR-KNKDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKAEDRVKIVK 557
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN + + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ + V
Sbjct: 558 EFNGMEEVN-ICLVSTMAGGLGLNFVGANIVILFDPTWNPANDLQAIDRAYRIGQCRDVK 616
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
++R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H+
Sbjct: 617 VFRLISLGTVEEMMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIHNL 673
Query: 698 VRSEIH 703
R + H
Sbjct: 674 FRFQDH 679
>gi|412990836|emb|CCO18208.1| Snf2 family protein [Bathycoccus prasinos]
Length = 793
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 261/567 (46%), Gaps = 93/567 (16%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGL--------------------LNAAGIHGC 211
V + +DP + R LR HQ+EGV++M+ + G N G
Sbjct: 89 VAVVMDPNIARKLRKHQKEGVRWMYRKLFGFDDENKKNNNNSEISSNRNSNTNIIENSGV 148
Query: 212 ILADDMGLGKTLQSIALLYTLLCQG---FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG 268
+LADDMGLGKTLQ +AL +T+L Q KP K+ ++ P +LV NW E KKW+G
Sbjct: 149 LLADDMGLGKTLQVLALAWTVLKQTPFPTLKKPF-KRILVTCPATLVGNWGNESKKWIGN 207
Query: 269 RVQLIALCESTRDDVVSGIDSFTDPCSSLQ------------VLIVSYETFRMHSSKFSC 316
+ ++V + + +++ +LI SYET R + +
Sbjct: 208 VRAQCVTADGGAENVERAFQKWIETNENVEEKPMQSSFDRFPILIASYETMRKMALRIPN 267
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNP-- 355
DLL CDEAHRLK+D T +N+L EF A+++ P
Sbjct: 268 HARPDLLYCDEAHRLKSDSNQTVDALKAVNAKHRVLMTGTPIQNNLMEFAAILDVVQPRA 327
Query: 356 -GILG--DAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNAL-L 411
I G F+ YE I+ R A E+KK G E ++L + ILRR L L
Sbjct: 328 KAIFGWNSLEEFKEMYERPIMEARASEANAEQKKRGKELEAQLRKVTKKRILRRKAELVL 387
Query: 412 SNHLPPKIIEVVCCKLTPLQSELY----NHFIHSKNVKRAISEETKQSKILAYITALKKL 467
+L PK ++ C ++ Q Y N+F + K + L+ I L++
Sbjct: 388 KEYLVPKTEYLMLCNMSGKQKRCYEAGSNYFKKN---------TNKNNNALSAIGILRQC 438
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARL 527
N K D I F + IR D E SGK+ L L
Sbjct: 439 ANSAKHCLDAIGRSTVLDKTFSNTIR-------DAAEKKEEEDDEGEEECSGKLSALCLL 491
Query: 528 LGHLRQRTD----------DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
L L+ + R+V+VS Y+ LD +LC+ RLDG+ KR +
Sbjct: 492 LQSLKGINEKNRSVNNGNYQRVVIVSGYSDQLDDADKLCKREGLTTTRLDGSVDKDKRSE 551
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
+V +FN + N V LLS +AGG GLNLIG N L+L D WNPA+D+QA ARVWRDGQ+K
Sbjct: 552 MVRNFN--TGNVDVMLLSVRAGGAGLNLIGANCLILMDASWNPADDRQAMARVWRDGQQK 609
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGL 664
VF+YR S GT+EE+V RQ+ KE L
Sbjct: 610 PVFVYRLASLGTVEERVLLRQLGKESL 636
>gi|149029138|gb|EDL84423.1| similar to putative repair and recombination helicase RAD26L
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 1542
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 178/601 (29%), Positives = 291/601 (48%), Gaps = 97/601 (16%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 117 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIKG-------RGCILGDDMGLGKTIQ 165
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M K++ +IV P S++ NW+ E+
Sbjct: 166 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDT 225
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ ++ + ++ + +YET R+ + + E +I
Sbjct: 226 W--GYFRVTVLHGSKKDNELTRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 277
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR++N +N+++E + ++++ PG+LG +F+
Sbjct: 278 VDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFK 337
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V
Sbjct: 338 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGYFLRRTKTLIKGQLPKKEDRMVYS 397
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 398 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSQGDTVRTLCLSYLT 457
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L+K+ NH L+ S + T C + F P+ D A+ LS
Sbjct: 458 VLQKVANHVALLQAASTSKHQETLIKRICDQVFSRFPDFVQ------KSKDAAFETLSDP 511
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM VL +LL H R+ D +++L S T+ LD+ Q C Y RLDG+T +R
Sbjct: 512 KYSGKMKVLDQLLNHFRKHRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEER 570
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN S++ + L+S+ AGG GLN IG N ++LFDP WNPAND QA R +R GQ
Sbjct: 571 LKIVKEFNS-SQDVNICLVSTMAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQ 629
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
+ V ++R +S GT+EE +Y RQ+ K+ L V+ + + S E +LF H
Sbjct: 630 CRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVH 689
Query: 696 D 696
+
Sbjct: 690 N 690
>gi|109504572|ref|XP_341481.3| PREDICTED: uncharacterized protein LOC361197 isoform 2 [Rattus
norvegicus]
gi|109505337|ref|XP_001058999.1| PREDICTED: uncharacterized protein LOC361197 isoform 1 [Rattus
norvegicus]
Length = 1533
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 178/601 (29%), Positives = 291/601 (48%), Gaps = 97/601 (16%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 108 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIKG-------RGCILGDDMGLGKTIQ 156
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M K++ +IV P S++ NW+ E+
Sbjct: 157 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDT 216
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ ++ + ++ + +YET R+ + + E +I
Sbjct: 217 W--GYFRVTVLHGSKKDNELTRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 268
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR++N +N+++E + ++++ PG+LG +F+
Sbjct: 269 VDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFK 328
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V
Sbjct: 329 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGYFLRRTKTLIKGQLPKKEDRMVYS 388
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 389 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSQGDTVRTLCLSYLT 448
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L+K+ NH L+ S + T C + F P+ D A+ LS
Sbjct: 449 VLQKVANHVALLQAASTSKHQETLIKRICDQVFSRFPDFVQ------KSKDAAFETLSDP 502
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM VL +LL H R+ D +++L S T+ LD+ Q C Y RLDG+T +R
Sbjct: 503 KYSGKMKVLDQLLNHFRKHRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEER 561
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN S++ + L+S+ AGG GLN IG N ++LFDP WNPAND QA R +R GQ
Sbjct: 562 LKIVKEFNS-SQDVNICLVSTMAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQ 620
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
+ V ++R +S GT+EE +Y RQ+ K+ L V+ + + S E +LF H
Sbjct: 621 CRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVH 680
Query: 696 D 696
+
Sbjct: 681 N 681
>gi|348560752|ref|XP_003466177.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia porcellus]
Length = 1477
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 267/552 (48%), Gaps = 76/552 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTL- 232
V L R L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 503 VPGFLFRKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 554
Query: 233 ----LCQG----FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
+G F+G + +IV PT+++ W E W +A+ T
Sbjct: 555 YSKIRTRGSNYRFEG---LGPTMIVCPTTVMHQWVKEFHTWWP--PFRVAILHETGSYAH 609
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D +LI SY R+ S +I DE H+++N
Sbjct: 610 RKEKLIRDIAHCHGILITSYSYVRLMQDDIS-RHDWHYVILDEGHKIRNPNAAITLACKQ 668
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 669 FRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQV 728
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK
Sbjct: 729 KTAYRCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKE 788
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP-PEMFSG 502
V + ++ E + I + + AL+K+CNHP L SG P G P E+ G
Sbjct: 789 VYQILNGEMQ---IFSGLVALRKICNHPDLF-----SGGPKNLGG------LPDEELEEG 834
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
+ G W + SGKM V+ LL + R R++L S Q L + R R Y
Sbjct: 835 QFGYW--------KRSGKMIVVESLL-KIWHRQGQRVLLFSQSRQMLHILEVFLRARGYS 885
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DG+T+I+ RQ L+ +N + + FVFLL+++ GG G+NL G NR++++DPDWNP+
Sbjct: 886 YLKMDGSTTIASRQPLITRYNQDT-SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPST 944
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQK++V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 945 DTQARERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 999
Query: 683 LSTEDLRDLFTF 694
+ DL +LFT
Sbjct: 1000 FKSNDLYELFTL 1011
>gi|268534396|ref|XP_002632329.1| Hypothetical protein CBG00336 [Caenorhabditis briggsae]
Length = 753
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 279/567 (49%), Gaps = 101/567 (17%)
Query: 178 PLLVRFLRPHQREGVQFMFECVS---GLLNAAGIHGCILADDMGLGKTLQSIALLYTLLC 234
P R LR HQ+EG++F+F+ + G A + D + K Q + + +
Sbjct: 122 PRFARHLRDHQKEGIKFIFDRLKVGEGKKKWAERFWQTIWDWEKVYKRWQPRSKTVSQIA 181
Query: 235 QGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC 294
Q +I+ P+SLV+NW++E +KW ++ A+ T D I S+
Sbjct: 182 QS---------CLIIVPSSLVNNWKSEFEKW-WRLMRFPAVIALTAMD----IKSYQTTI 227
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-----DQTLTN---------- 339
++ L++SY+ + H K D+++CDE H+LKN +TL +
Sbjct: 228 KTMPYLVISYDLAQRHVEKLRACRF-DVMVCDEGHKLKNLDGRLRKTLLSLEIPRRLILT 286
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+ND +EF++++NF P FR ++C + +E+ +E+
Sbjct: 287 GTPMQNDFDEFYSILNFVCPAKFDSLPRFR------LMCNDD-----------VEQLNEI 329
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
+++ +LRRT A + LP + I + C + +Q IHS+ +
Sbjct: 330 ---IDECMLRRTAAGIPFSLPDEYI--LFCAASRIQKA-----IHSEICDYMTGDP---- 375
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGT-----------TGFEDCIRFFPPEMFSGRS 504
L+ I ++L NHPKL+ D ++ N T T + F P M G +
Sbjct: 376 --LSLIFFARQLANHPKLLLDNLREKNSKTGEKSLKQAQKHTAL--LLAFDGPNMPRGAA 431
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
SGK++ LA +L R + V+VSNY +TLD+ QLC +
Sbjct: 432 KE-----------SGKLYALADMLKCFRM-LQECTVVVSNYIETLDMIEQLCAYLEFRVF 479
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDG T + RQKLV +FND +FLLS+KAGG GLNLIG +RLVLFD DWNPAND+
Sbjct: 480 RLDGKTQVQDRQKLVRNFNDQRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPANDQ 539
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ-EQTDSSATQGNFL 683
QA AR+WRDGQ + IYR ++TGTIEEK+ QRQ+ K GL VI E D+ +T
Sbjct: 540 QAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGLGCVIDAIEVGDTVST----F 595
Query: 684 STEDLRDLFTFH-DDVRSEIHENMHCT 709
+ EDL+D+FTF DD H+ C+
Sbjct: 596 TDEDLKDIFTFTGDDTECNTHDLCDCS 622
>gi|354465787|ref|XP_003495358.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cricetulus
griseus]
Length = 1478
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 269/553 (48%), Gaps = 78/553 (14%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 492 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 543
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
F+G + IIV PT+++ W E W +A+ T
Sbjct: 544 YSKIRTRGSNYRFEG---LGPTIIVCPTTVMHQWVKEFHMWWPPF--RVAILHETGSYAH 598
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
D VLI SY R+ S +I DE H+++N
Sbjct: 599 KKERLVRDIVHCHGVLITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQ 657
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 658 FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV 717
Query: 386 KLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
K + + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK
Sbjct: 718 KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKE 777
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT-TGF-EDCIRFFPPEMFS 501
V R ++ E ++I + + AL+K+CNHP L SG P +G ED E+
Sbjct: 778 VYRILNGE---NQIFSGLVALRKICNHPDLF-----SGGPKNLSGLPED-------ELEE 822
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ G W + SGKM V+ LL + + R++L S Q L + R +Y
Sbjct: 823 DQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLHILEVFLRAHKY 873
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+
Sbjct: 874 SYLKMDGTTTIASRQPLITKYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPS 932
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q
Sbjct: 933 TDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRR 987
Query: 682 FLSTEDLRDLFTF 694
F + DL +LFT
Sbjct: 988 FFKSNDLYELFTL 1000
>gi|443708226|gb|ELU03433.1| hypothetical protein CAPTEDRAFT_20149 [Capitella teleta]
Length = 777
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 255/514 (49%), Gaps = 59/514 (11%)
Query: 210 GCILADDMGLGKTLQSIALLYTL----LCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 265
G IL D+MGLGKT+Q IA L L L G + + + ++++ PT+++ W E KW
Sbjct: 10 GGILGDEMGLGKTIQVIAFLAGLENSQLALGRESRGL-GPSLVICPTTVLHQWVKEFHKW 68
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
R +A+ + S ++ + +L+ +Y + +H +S I
Sbjct: 69 WPQR--RVAVLHHSGSYSGSEVNLIRSIIGAKGILVTAYSSVLLHQD-LLLPQSWHYAIL 125
Query: 326 DEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRR 366
DE H+++N +N+L+E +++ +F PG LG F +
Sbjct: 126 DEGHKIRNPNAQITVACKQLKTCHRVILSGSPVQNNLKELWSLFDFIFPGKLGTLPDFMQ 185
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALL--SNHLPPKIIEVVC 424
++ I+ G AT+ + + + L +N ++LRR A + S LP K +V+
Sbjct: 186 HFSVPIVQGGYSNATQVAVQTAYKCACVLRDTINPYLLRRMKADVKESLSLPAKNEQVLF 245
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPG 484
C+LT Q E+Y ++ SK +S + + L+K+CNHP L +G P
Sbjct: 246 CRLTEHQREVYKEYLDSKECNSILS---GGFMVFPGLVTLRKVCNHPDL-----STGGPS 297
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
+D E + + G W + SGKM VL LL L ++ + R++L S
Sbjct: 298 LFHVDD-----EEEEAAKKFGFW--------KRSGKMQVLDPLL-RLWKKQNHRVLLFSQ 343
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGL 603
Q L++ ER Y Y R+DG T IS RQ L+N FN DPS F+FLL+++ GG G+
Sbjct: 344 SRQMLEILQSYVEERGYVYRRMDGGTPISARQPLINSFNEDPSV--FIFLLTTRVGGLGI 401
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NL G NR+V++DPDWNP+ D QA R WR GQ K V +YR L+ GTIEEK+Y RQ+ K+
Sbjct: 402 NLTGANRVVIYDPDWNPSTDLQARERAWRIGQLKDVTVYRLLTAGTIEEKIYHRQIFKQF 461
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
L + ++ Q F DL +LFT DD
Sbjct: 462 LTNRVLKD-----PKQRRFFKANDLYELFTLTDD 490
>gi|353235188|emb|CCA67205.1| related to RDH54-protein required for mitotic diploid-specific
recombination and repair and meiosis [Piriformospora
indica DSM 11827]
Length = 519
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 213/413 (51%), Gaps = 54/413 (13%)
Query: 316 CSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPG 356
C L++CDE HRLK + T++ NDL EF AMV F NP
Sbjct: 12 CHPPIGLIVCDEGHRLKTAGSKTSQMFKALRTPRRIILSGTPIQNDLGEFHAMVEFCNPT 71
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
+L D + F+R +E I+ R P + + ++ G + L F+LRR ++LSN+LP
Sbjct: 72 LLDDYSVFKRLFEAPILASRLPDCSPKAREAGEVCAMHLKRLAKSFVLRREASILSNYLP 131
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
PK VV T LQ + +H + ++ T +S LA I L KLCN P L+
Sbjct: 132 PKYEYVVFITPTKLQLSMMQELLHPDRL-HYLTGNTARS--LALIQTLSKLCNSPLLL-- 186
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
+ G +R PP G + V LSGK+ L+ +L L+ TD
Sbjct: 187 --RHKEDADEGLRAALRLLPP-----------GAAPSDVSLSGKLQALSSILKELKSTTD 233
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNE-FVFLLS 595
++ ++VSNYT TL++ C ++RY + RLDG T KRQ+ V+ FN S+NE F+FLLS
Sbjct: 234 EKCIIVSNYTSTLNIVEAFCTKQRYTFFRLDGQTPQVKRQEYVDKFNKSSQNERFLFLLS 293
Query: 596 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 655
+KAGG G++ ++D QA AR+ RDGQK+ VFIYR L+ GTI+EK+Y
Sbjct: 294 TKAGGVGMS----------------SHDLQAMARIHRDGQKRPVFIYRLLTAGTIDEKIY 337
Query: 656 QRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC 708
QRQ++K GL + ++ + + +LRDLF + DV HE + C
Sbjct: 338 QRQITKIGLSDAMMGNSVRGGKSKTDSFTNRELRDLFNIYPDVACHTHELLGC 390
>gi|391327035|ref|XP_003738014.1| PREDICTED: DNA excision repair protein ERCC-6-like [Metaseiulus
occidentalis]
Length = 1213
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/563 (30%), Positives = 271/563 (48%), Gaps = 74/563 (13%)
Query: 210 GCILADDMGLGKTLQSIALLYTLL-------CQGFDGKPMVKKAIIVTPTSLVSNWEAEI 262
G I+ D+MGLGKT+Q+IA L L + F G + I+VTP +++ W E
Sbjct: 382 GGIIGDEMGLGKTIQAIAFLRGLRHSNTKLPGEAFRG---LGPIILVTPATVMHQWVKEF 438
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPC-SSLQVLIVSYETFRMHSSKFSCSESCD 321
KW Q + + ++ + D SS LI SY+ M+
Sbjct: 439 HKWFPR--QRVGVLHNSGSYSGRKKSTLIDEIHSSKGTLITSYQGIVMYQDDL-IHHHWH 495
Query: 322 LLICDEAHRLKN---DQTLTNR----------------NDLEEFFAMVNFTNPGILGDAA 362
+I DE H+++N TL + N+L E +++ +F PG LG
Sbjct: 496 YIILDEGHKIRNPDAQATLAVKQFRTPHRLILSGSPIQNNLRELWSLFDFVFPGKLGTLP 555
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKII 420
F + I G ATE + +G ++ L + ++LRR ++ S +LPPK
Sbjct: 556 VFMAEFAVPITHGGYANATETQVAVGYRCATILRDTIKPYLLRRMKSDVKTSINLPPKSE 615
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
+V+ CKLT Q +LY ++ S VK+ + + +I + L+K+CNHP L YD
Sbjct: 616 QVIFCKLTERQRDLYREYVESHEVKKILD---GRMQIFVGLVNLRKICNHPDL-YD---- 667
Query: 481 GNPGTTGFEDCI---RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
G P +D I R P F + + SGK+ V+ LL L +
Sbjct: 668 GGPD----KDIITSSRKVPSSSF------------GFYKRSGKLMVVEALL-KLWSKQKQ 710
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
R++L + Q L + + + R Y YL +DG+T+IS RQ ++ FN S + F+FLL+++
Sbjct: 711 RVLLFTQSRQMLRILEEFVQNRHYTYLSMDGSTAISTRQPAIDRFNQDS-SIFIFLLTTR 769
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
GG G+NL G NR++++DPDWNP+ D QA R WR GQ+K V +YR ++ GTIEEK+Y R
Sbjct: 770 VGGLGVNLTGANRVIIYDPDWNPSTDMQARERAWRIGQQKDVTVYRLMTAGTIEEKIYHR 829
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDG 717
Q+ K+ L + + + Q F T ++ +LFT +DV E T + G
Sbjct: 830 QIFKQFLTNRVLK-----NPKQRRFFKTNEMYELFTLSEDVHKE-----ERTETSDIFAG 879
Query: 718 AESIGEGDETNSANKNDQSDQEV 740
S + + NK + D+E
Sbjct: 880 TGSTVDRKRLKALNKQKRQDEET 902
>gi|344281916|ref|XP_003412722.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Loxodonta africana]
Length = 1280
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 276/576 (47%), Gaps = 100/576 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EG+ F++ L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 144 LFEHQKEGIAFLYS-----LYRDGRKGGILADDMGLGKTVQIIAFLSGM----FDA-ALV 193
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+++ PT+L+S W E KW G +++ A ++D+ + V+I +
Sbjct: 194 NHVLLIMPTNLISTWVKEFVKWTPG-MRVKAFHGPSKDERTRNLSRIQQRNG---VIITT 249
Query: 304 YETFRMHSSKFSCSES----CDLLICDEAHRLKNDQTLT----------NR--------- 340
Y+ + + S D +I DEAH++K T + NR
Sbjct: 250 YQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSATCARAIPAKNRILLTGTPIQ 309
Query: 341 NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
N+L+E +++ +F G +LG F+ YE II RE AT EK LG + S L A +
Sbjct: 310 NNLQELWSLFDFACQGSLLGTLKTFKMQYENPIIKAREKDATPGEKALGFKISENLMAII 369
Query: 400 NQFILRRTN-----ALLSNHLPPKI--------IEVVC--------------CKLTPLQS 432
+ LRRT LSN P+I ++ +C +L PLQ
Sbjct: 370 KPYFLRRTKEEVQEKKLSN---PEIRHSKKNPDVDAICEMPSLSRKNDLIIWIRLVPLQE 426
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
E+Y F+ ++K + E LA + LKKLC+HP+L+ + C+
Sbjct: 427 EIYRKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLL-----------SARACCL 472
Query: 493 RFFPPEMFSGRS-----GSWTGG------DGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
FS ++ GS G D + SGKM L LL LR +V
Sbjct: 473 LNLKGSKFSSQNENEGEGSSDVGHIDQVTDATLINESGKMIFLMELLKRLRDEGHQTLVF 532
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
S Q L+ + + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG
Sbjct: 533 -SQSRQILNFIEHVLKNRHFKTLRIDGTITHLLEREKRINLFQQ-NKDYSVFLLTTQVGG 590
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GL L R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+
Sbjct: 591 VGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQIF 650
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
K+ L++ + T + S ++LR+LFT D
Sbjct: 651 KDSLRR----QTTGDKKNPFRYFSKQELRELFTIED 682
>gi|332832400|ref|XP_528720.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Pan troglodytes]
Length = 701
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 291/601 (48%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++ IHG CIL DDMGLGKT+
Sbjct: 109 SDDGDSIPYTIN----RYLRDYQREGTRFLY--------GHYIHGGGCILGDDMGLGKTV 156
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P+ A +IV P S++ NW+ E+
Sbjct: 157 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDEL 216
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 217 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 268
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG Y
Sbjct: 269 VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTY 328
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 329 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 388
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 389 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 448
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 449 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 507
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 508 GKMKVLQQLLNHCRI-NRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 567 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 625
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 626 VKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 682
Query: 696 D 696
+
Sbjct: 683 N 683
>gi|219110099|ref|XP_002176801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411336|gb|EEC51264.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 711
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 288/569 (50%), Gaps = 56/569 (9%)
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR 269
G I+ D+MGLGKT+Q+ + + L +K +I++P +++ +W E+ W G
Sbjct: 10 GGIIGDEMGLGKTVQASSFIGVLAAS-----RKLKSVLIISPATMLQHWLNELAVWAPG- 63
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
++ I + +S D SF C + V++ +YE R ++ ++ + ++ DEA
Sbjct: 64 LRRILIHQSGEDLETLPSHSF---CGTGYVVLTTYENVRRNTDIYT-EHAWSYVVLDEAQ 119
Query: 330 RLKN---DQTLTNR----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
+++N D TL + NDL+E +++ +F PG LG F + +
Sbjct: 120 KIRNPDADITLACKRIRTPHRLAMSGTPIQNDLKELWSLFDFVFPGRLGTLPAFEQEFAD 179
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLT 428
+I G A+ + +L + L +N ++LRR + + + +P K V+ C+L+
Sbjct: 180 TIKRGGYSNASPMQVQLAYRCAMVLRDLINPYLLRRQKKDVIEVSRMPGKTEHVLFCRLS 239
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
Q LY F+ S V + + + +KQ + A +T L+K+CNHP L D P F
Sbjct: 240 QRQRALYEAFLLSDEVTKVV-KGSKQ--LFAAVTMLRKICNHPDLACD------PDEASF 290
Query: 489 EDCIR-----FFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
E +R + S G + + VE SGK+ VL+++L L ++ R+++
Sbjct: 291 ESFVRNGYVNQGDLDEDLSDLDSDIGEEKSLVERSGKLEVLSKILP-LWKKQGHRVLIFC 349
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
+ + LD+ +L + + + RLDG T+++ RQ+LV+ FN ++ F L +++ GG GL
Sbjct: 350 QWRKMLDIIERLIMLKEWKFGRLDGNTNVASRQRLVDQFNS-DESYFGMLCTTRTGGVGL 408
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NL G NR++L+DPDWNP D QA R WR GQ++ V +YR ++ GTIEEK+YQRQ+ K
Sbjct: 409 NLTGANRIILYDPDWNPQTDAQARERAWRFGQEREVTVYRLITAGTIEEKIYQRQIFKTA 468
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD---VRSEIHENMHCTRCQNYDDGAES 720
L + Q+ Q S +DLRDLFT D VRS E + T G +
Sbjct: 469 LSNKVLQD-----PRQRRLFSQKDLRDLFTLKADAGSVRSG-GEGLTETGAITRHGGVVN 522
Query: 721 IGEGDETNSANKNDQSDQEVTDIGGFAGL 749
I E + ND++ + V G AG+
Sbjct: 523 IDEDPTDEPSLDNDEALKTVMRSRGLAGV 551
>gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1481
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 265/549 (48%), Gaps = 76/549 (13%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 493 FLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 544
Query: 237 ---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
F G + IIV PT+++ W E W +A+ T
Sbjct: 545 IRTRGSNYRFKG---LGPTIIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTQKKE 599
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
D +LI SY R+ S +I DE H+++N
Sbjct: 600 KLIRDIAHCHGILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQFRT 658
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L E +++ +F PG LG F + I G A+ + K
Sbjct: 659 PHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTA 718
Query: 389 IERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR ++ +S LP K +V+ C+LT Q +Y +FI SK V R
Sbjct: 719 YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHRVYQNFIDSKEVYR 778
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP-EMFSGRSG 505
++ + + I + + AL+K+CNHP L SG P + P E+ + G
Sbjct: 779 ILNGDMQ---IFSGLVALRKICNHPDLF-----SGGPKNP------KDIPDGELEEDQFG 824
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
W + SGKM V+ LL + + R++L S Q LD+ R ++Y YL+
Sbjct: 825 YW--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLK 875
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
+DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+ D Q
Sbjct: 876 MDGTTAIASRQPLITRYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQ 934
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A R WR GQKK+V +YR L+ GTIEEK++ RQ+ K+ L + ++ Q F +
Sbjct: 935 ARERAWRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKD-----PKQRRFFKS 989
Query: 686 EDLRDLFTF 694
DL +LFT
Sbjct: 990 NDLYELFTL 998
>gi|431897839|gb|ELK06673.1| Putative DNA repair and recombination protein RAD26-like protein
[Pteropus alecto]
Length = 1541
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 282/577 (48%), Gaps = 96/577 (16%)
Query: 164 PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKT 222
P + G +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT
Sbjct: 107 PLSKDGESIPYTIN----RYLRDYQREGAQFLYGHFIQG-------RGCILGDDMGLGKT 155
Query: 223 LQSIALLYTLL-----------------CQGFDGKPMV----KKAIIVTPTSLVSNWEAE 261
+Q I+ L +L + +P + K +IV P S++ NW E
Sbjct: 156 VQVISFLAAVLHKRGTREDIENNMPEFLLRSLKKEPPLSISKKMFLIVAPLSVLYNWRDE 215
Query: 262 IKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
+ W G ++ L + +D+ + + +V + +YET R+ + E
Sbjct: 216 LDTW--GYFRVTILHGNKKDNELIRVKQ-----RKCEVALTTYETLRLCLDDLNSLE-WS 267
Query: 322 LLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAA 362
+I DEAHR+KN + +N+++E + ++++ PG+LG
Sbjct: 268 AVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRI 327
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
+F++ + + G+ TAT+ E G + +L+ K++ + LRRT L+ + LP K +
Sbjct: 328 HFKKQFSDPVEHGQRHTATKRELATGRKAMQKLAKKMSGWFLRRTKTLIKDQLPKKEDRI 387
Query: 423 VCCKLTPLQSELYNHFIHSKNV-----------------------KRAISE----ETKQS 455
V C LT Q +Y + +++V K +IS ET ++
Sbjct: 388 VYCSLTDFQKAVYQTVLETEDVILILQSSEPCTCSSGRKRRNCCYKASISTNSRGETVKT 447
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF---PPEMFSGRSGSW-TGGD 511
+Y+ L+K+ NH L+ S T C + F P + + ++ T D
Sbjct: 448 LYFSYLAVLQKVANHVALLQAASTSKQQETIIKRICDQVFSRFPDYVQKSKDAAFQTLSD 507
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
+ SGKM VL +LL H R + +D+++L S T+ LD+ Q C Y RLDG+T
Sbjct: 508 PKY---SGKMKVLEQLLNHCR-KNNDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTK 563
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
+R K+V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +
Sbjct: 564 SEERIKIVKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAY 622
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
R GQ + V ++R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 623 RIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVV 659
>gi|402898076|ref|XP_003912058.1| PREDICTED: uncharacterized protein LOC101017805 [Papio anubis]
Length = 1649
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 295/601 (49%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P TV+ R+LR +QREG QF++ IHG CIL DDMGLGKT+
Sbjct: 211 SDDGDSIPYTVN----RYLRDYQREGAQFLY--------GHYIHGRGCILGDDMGLGKTV 258
Query: 224 QSIALLYTLLCQG------------FDGKPMVKKA---------IIVTPTSLVSNWEAEI 262
Q ++ L +L + F + M K+ +IV P S++ NW+ E+
Sbjct: 259 QVMSFLAAVLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDEL 318
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 319 DTW--GYFRVTILHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 370
Query: 323 LICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + LT +N+++E + ++++ PG+LG
Sbjct: 371 VIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGTRTC 430
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ +++ + LRRT AL+ + LP K +V
Sbjct: 431 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLARRMSGWFLRRTKALIKDQLPKKEDRMV 490
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 491 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 550
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 551 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 609
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 610 GKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 668
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 669 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 727
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 728 VKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 784
Query: 696 D 696
+
Sbjct: 785 N 785
>gi|354505095|ref|XP_003514607.1| PREDICTED: putative DNA repair and recombination protein
RAD26-like, partial [Cricetulus griseus]
Length = 1141
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/601 (29%), Positives = 290/601 (48%), Gaps = 97/601 (16%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 107 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIQG-------RGCILGDDMGLGKTIQ 155
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M K+ ++V P S++ NW+ E+
Sbjct: 156 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKEPSSTAQKMFLVVAPLSVLYNWKDELDT 215
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W RV ++ ++ D+ G+ ++ + +YET R+ + + E +I
Sbjct: 216 WGYFRVTVL---HGSKKDI--GLLRLKQ--RKCEIALTTYETLRLCLEELNSLE-WSAVI 267
Query: 325 CDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + + N+++E + ++++ PG+LG +YF+
Sbjct: 268 VDEAHRIKNPKARVTQVMKALKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSKSYFK 327
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ LRRT L+ LP K +V C
Sbjct: 328 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGCFLRRTKTLIKGQLPKKEDRMVYC 387
Query: 426 KLTPLQSELYNHFIHSKNV-----------------KRAISEETK------QSKILAYIT 462
LT Q +Y + +++V +R +T ++ L+Y+T
Sbjct: 388 SLTEFQKAVYQTVLETEDVALILQSSQPCTCGSGRKRRNCCYKTNSQGDKVRTLCLSYLT 447
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L+K+ NH L+ S T + C + F P+ D A+ LS
Sbjct: 448 VLQKVANHVALLQTASTSKQQETLIKKICDQVFSRFPDFVQ------KSKDAAFETLSDP 501
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM VL +LL H R+ D +++L S T+ LD+ Q C Y RLDG+T +R
Sbjct: 502 KYSGKMKVLQQLLNHFRKHRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEER 560
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN +K+ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ
Sbjct: 561 LKIVKEFNS-TKDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQ 619
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
+ V + R +S GT+EE +Y RQ+ K+ L V+ + + S E +LF H
Sbjct: 620 CRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVH 679
Query: 696 D 696
+
Sbjct: 680 N 680
>gi|354493473|ref|XP_003508866.1| PREDICTED: DNA excision repair protein ERCC-6 [Cricetulus griseus]
gi|344257931|gb|EGW14035.1| DNA excision repair protein ERCC-6-like [Cricetulus griseus]
Length = 1249
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 284/571 (49%), Gaps = 82/571 (14%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L L HQ+EG+ F++ L G G ILADDMGLGKT+Q IA L + FD
Sbjct: 96 LYEKLFEHQKEGIAFLYS-----LYKDGRKGGILADDMGLGKTVQIIAFLSGM----FDA 146
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CS 295
+V + +++ PTSL++ W E KW G +++ S++D+ + +
Sbjct: 147 S-LVNRVLLIMPTSLINTWVKEFAKWTPG-MRVKTFHGSSKDERTRNLTRIQQRNGVIIT 204
Query: 296 SLQVLIVSYETFRMHSSKFSCSESC-DLLICDEAHRLKNDQT----------------LT 338
+ Q+LI +++ + F+ E D +I DEAH++K+ T LT
Sbjct: 205 TYQMLINNWQQL----ASFNGQEFVWDYVILDEAHKIKSASTKSAICARAVPASHRLLLT 260
Query: 339 N---RNDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
+N+L+E +++ +F G +LG F+ YE II RE AT EK LG++ S
Sbjct: 261 GTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGLKISEN 320
Query: 395 LSAKVNQFILRRTNALLSNHLP--PKI--------IEVVC--------------CKLTPL 430
L + + LRRT + P+ +E +C +L PL
Sbjct: 321 LMEIIKPYFLRRTKEEVQTKKADNPEAGLSEKNLGVEAICEMPSLTRKNDFIVWIRLVPL 380
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI-KSGNPGTTGF- 488
Q E+Y F+ ++K + E LA + LKKLC+HP+L+ + N GT F
Sbjct: 381 QEEIYRKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSARVCHLLNLGTATFS 437
Query: 489 --EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
++ + P++ S + D A ++ SGKM L LL L+ +V S
Sbjct: 438 VQDENEQEVAPDVDSIHHLT----DNALMQESGKMIFLVALLERLQDEGHQTLVF-SQSR 492
Query: 547 QTLDLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNL 605
Q L++ +L R R + LR+DGT T + +R+K + F +K VFLL+++ GG GL L
Sbjct: 493 QILNIIERLLRNRHFKTLRIDGTITHLWEREKRIQLFQQ-NKEYSVFLLTTQVGGVGLTL 551
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L
Sbjct: 552 TAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLI 611
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ + T + S ++LR+LFT D
Sbjct: 612 R----QTTGEKKNPFRYFSKQELRELFTVGD 638
>gi|345327989|ref|XP_001508174.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 882
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 268/554 (48%), Gaps = 79/554 (14%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 107 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 158
Query: 234 CQG---------FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDV 283
F G + +IV PT+++ W E W RV ++ S +
Sbjct: 159 YSKIRTRGSNYRFKG---LGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTNKK 215
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
V I C +LI SY R+ + + +I DE H+++N
Sbjct: 216 VKLIHEIAG-CQG--ILITSYSYIRLMQDNIN-NYDWHYVILDEGHKIRNPNAAVTLACK 271
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+N+L E +++ +F PG LG F + I G A+ +
Sbjct: 272 QFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ 331
Query: 385 KKLGIERSSELSAKVNQFILRRTNA--LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK 442
K + + L +N ++LRR A +S LP K +V+ C+LT Q E+Y +FI SK
Sbjct: 332 VKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTAEQREVYQNFIDSK 391
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS- 501
V +S E + I + AL+K+CNHP L SG P ++ P +
Sbjct: 392 EVYSILSGEMQ---IFPGLMALRKMCNHPDLF-----SGGP------KILKNVPDDELEE 437
Query: 502 -GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+ G W + SGKM V+ LL + + R++L S Q L + R ++
Sbjct: 438 EDQFGYW--------KRSGKMIVVESLL-KIWHKQGHRVLLFSQSRQMLHILEVFLRGQK 488
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP
Sbjct: 489 YSYLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNP 547
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
+ D QA R WR GQK++V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q
Sbjct: 548 STDTQARERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQR 602
Query: 681 NFLSTEDLRDLFTF 694
F + DL +LFT
Sbjct: 603 RFFKSNDLYELFTL 616
>gi|303275450|ref|XP_003057019.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226461371|gb|EEH58664.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 665
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 274/546 (50%), Gaps = 86/546 (15%)
Query: 183 FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL--------C 234
+LR +QREGV F+++ A G +L DDMGLGKT+Q+IA L +L C
Sbjct: 98 YLREYQREGVMFLYKLY------ATRKGGVLGDDMGLGKTIQTIAFLAAVLKSPASFDAC 151
Query: 235 QGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV-----GGRVQLIALCESTRDDVVSGIDS 289
G P A+IV PTS+++NWE E+ +W GG V + + + + D + + +
Sbjct: 152 TGAPPPP----ALIVCPTSVLTNWERELARWGEHLPDGGFV-VEKVHGADKADAWARVKA 206
Query: 290 FTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL------------ 337
S + +++ +Y+TFR+ + + S+ +++ DEAHRLKND+T+
Sbjct: 207 ---KASDIGIVLTAYDTFRLGVDEMT-SQRWSVVVFDEAHRLKNDKTMLYEAARRLPRER 262
Query: 338 -------TNRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIE 390
+N +E + ++++ PG LG F+ YY + + A + G +
Sbjct: 263 RFGLTGTVMQNSYDELWCLLDWACPGSLGGLKAFKEYYSKYMQQAQRFGADDYTLGRGRD 322
Query: 391 RSSELSAKVNQFILRRTN-ALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI- 448
R+ +L + +++L+RT +L+ LP K VV C+L+PLQ +Y + S +++ +
Sbjct: 323 RADQLKRLLRRYVLKRTKKVVLAGQLPEKSDNVVFCELSPLQRRVYRRLLDSPDMQLLVR 382
Query: 449 --------SEETKQS----------------KILAYITALKKLCNHPKLIYDTIKSGNPG 484
S E + S L YI L +L NH +L+ +
Sbjct: 383 FAEDCDCGSGERRSSCCYAAPPDGHRACPHCMSLVYINILLRLSNHLELLKPDHGDEDKE 442
Query: 485 TTGFEDCIRFFPPEMFSGRSGSWTGG----DGAWVELSGKMHV----LARLLGHLRQRTD 536
++ + F G GG D + +S + L + R +
Sbjct: 443 KVARDEVVAKFA----LGEDAHLLGGADRQDNDFARISAATNCGKLLALEKLLEIWHRAN 498
Query: 537 DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSS 596
D+++L S T+ LD+ + R Y Y RLDG T+ + RQ LV+ FN+ S + FVFLLS+
Sbjct: 499 DKVLLFSKSTRLLDILEKFLSRRGYVYCRLDGGTAQNARQPLVDDFNN-SSSMFVFLLST 557
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
KAGG GLN+ NR+V+FDPDWNPA D QA R +R GQ++ V +YRF++ TIEE VYQ
Sbjct: 558 KAGGVGLNITSANRVVVFDPDWNPALDLQAQDRAYRIGQRRDVNVYRFIAADTIEEIVYQ 617
Query: 657 RQMSKE 662
RQ+ K+
Sbjct: 618 RQVYKQ 623
>gi|395862525|ref|XP_003803497.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1252
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 276/564 (48%), Gaps = 76/564 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F + L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 96 LFEHQKEGVAFFYS-----LYRDGRKGGILADDMGLGKTIQIIAFLSGM----FDAS-LV 145
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQV 299
+++ PT+L++ W E KW G +++ ++D+ ++ ++ Q+
Sbjct: 146 NHVLLIMPTNLINTWVKEFVKWTPG-MRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQM 204
Query: 300 LIVSYETFRMHSSKFSCSESC-DLLICDEAHRLKNDQTLT----------NR-------- 340
LI ++ S F+ E D +I DEAH++K T + NR
Sbjct: 205 LINNWRQL----SSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLTGTPI 260
Query: 341 -NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
N+L+E +++ +F G +LG F+ YE I R+ AT EK LG + S L A
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISENLMAI 320
Query: 399 VNQFILRRTNALL----SNHLPPKIIE--------------------VVCCKLTPLQSEL 434
+ + LRRT + S++L +I E ++ +L PLQ E+
Sbjct: 321 IKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI-YDTIKSGNPGTTGFEDCIR 493
Y F+ ++K + E LA + LKKLC+HP+L+ + N GT F +
Sbjct: 381 YRKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSARACQLLNLGTVKF-SALD 436
Query: 494 FFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
E F D +E SGKM L LL LR +V S Q L++
Sbjct: 437 GNEGEDFPDMDHIDQITDETLMEESGKMIFLMDLLKRLRDEGHQTLVF-SQSRQILNIIE 495
Query: 554 QLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
L + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG GL L R+V
Sbjct: 496 HLLKNRHFKTLRIDGTITHLLEREKRINLFQK-NKDYSVFLLTTQVGGVGLTLTAATRVV 554
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L + +
Sbjct: 555 IFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIR----QT 610
Query: 673 TDSSATQGNFLSTEDLRDLFTFHD 696
T + S ++LR+LFT D
Sbjct: 611 TGEKKNPFRYFSKQELRELFTIED 634
>gi|149029137|gb|EDL84422.1| similar to putative repair and recombination helicase RAD26L
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 708
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 297/604 (49%), Gaps = 103/604 (17%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 117 SEDGDSIPYTIN----RYLRDYQREGAQFLYRHYIKG-------RGCILGDDMGLGKTIQ 165
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F K M K++ +IV P S++ NW+ E+
Sbjct: 166 VISFLAAVLHKKGTREDIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDT 225
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L S +D+ ++ + ++ + +YET R+ + + E +I
Sbjct: 226 W--GYFRVTVLHGSKKDNELTRLKQ-----RKCEIALTTYETLRLCLEELNSLE-WSAII 277
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR++N +N+++E + ++++ PG+LG +F+
Sbjct: 278 VDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFK 337
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ LP K +V
Sbjct: 338 KQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGYFLRRTKTLIKGQLPKKEDRMVYS 397
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V ++ +T ++ L+Y+T
Sbjct: 398 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSQGDTVRTLCLSYLT 457
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L+K+ NH L+ S + T C + F P+ F +S D A+ LS
Sbjct: 458 VLQKVANHVALLQAASTSKHQETLIKRICDQVFSRFPD-FVQKSK-----DAAFETLSDP 511
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM VL +LL H R+ D +++L S T+ LD+ Q C Y RLDG+T +R
Sbjct: 512 KYSGKMKVLDQLLNHFRKHRD-KVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEER 570
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN S++ + L+S+ AGG GLN IG N ++LFDP WNPAND QA R +R GQ
Sbjct: 571 LKIVKEFNS-SQDVNICLVSTMAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQ 629
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLF 692
+ V ++R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF
Sbjct: 630 CRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHRGELF 686
Query: 693 TFHD 696
H+
Sbjct: 687 GVHN 690
>gi|118092751|ref|XP_421656.2| PREDICTED: DNA excision repair protein ERCC-6 [Gallus gallus]
Length = 1495
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 268/549 (48%), Gaps = 69/549 (12%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 494 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 545
Query: 234 CQGFDGKPM------VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSG 286
+ + +IV P +++ W E W RV ++ S + V
Sbjct: 546 YSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKL 605
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------- 339
I S +LI SY R+ S +I DE H+++N
Sbjct: 606 IREI---ASCHGILITSYSYIRLMQDNIH-SYDWHYVILDEGHKIRNPNAAVTLACKQFR 661
Query: 340 ------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
+N+L+E +++ +F PG LG F + I G A+ + K
Sbjct: 662 TPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKT 721
Query: 388 GIERSSELSAKVNQFILRRTNA--LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ + L +N ++LRR A +S LP K +V+ C+LT Q ++Y +FI SK V
Sbjct: 722 AYKCACVLRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDSKEVY 781
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
+ ++ + + + + + AL+K+CNHP L SG P C+ P+ +
Sbjct: 782 QILNGDMQ---VFSGLVALRKICNHPDLF-----SGGPKIL---KCV----PDADLEEAD 826
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
+ G W + SGKM V+ LL + + R++ + Q L + R+R Y YLR
Sbjct: 827 QF----GYW-KRSGKMIVVESLL-KIWHKQGHRVLFFTQSRQMLQILEVFLRDRNYSYLR 880
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
+DGTT+I+ RQ L+ +N+ K+ F+FLL+++ GG G+NL G +R++++DPDWNP+ D Q
Sbjct: 881 MDGTTTIASRQPLITRYNE-DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQ 939
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST 685
A R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F +
Sbjct: 940 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFKS 994
Query: 686 EDLRDLFTF 694
DL +LFT
Sbjct: 995 NDLYELFTL 1003
>gi|383861226|ref|XP_003706087.1| PREDICTED: DNA excision repair protein ERCC-6-like [Megachile
rotundata]
Length = 1127
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 273/560 (48%), Gaps = 72/560 (12%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP ++ L R+ Q+ VQ+++E G +L D+MGLGKT+Q IA L
Sbjct: 317 VPQSIWKKLYRY----QKVSVQWLWEL------HCRNQGGLLGDEMGLGKTVQVIAFLAG 366
Query: 232 LLCQGF--DGKPM--VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSG 286
L C DG + I++ P +L+ W +W RV ++ S D+
Sbjct: 367 LDCSELLSDGGRFRGLGPTIVICPATLMEQWVKHFHEWWPILRVVVLHQSGSYNGDLEYL 426
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
I S C +L+ SY + H +E +I DE H+++N Q ++
Sbjct: 427 IHSL--QCGG--ILVTSYSSMLNHKQILVSAE-WHYVILDEGHKIRNPQAKVSKAVKEFS 481
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
N L+E +++ +F PG LG F + I G A+ ++
Sbjct: 482 TPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANASPLQEAT 541
Query: 388 GIERSSELSAKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNHFIHSKNV- 444
+ ++ L + ++LRRT + +H LP K +V+ C LT Q +LY ++ S++V
Sbjct: 542 ALHVATMLRDAITPYMLRRTKQDVQHHVSLPEKNEQVLFCSLTEEQKKLYKKYLCSEDVS 601
Query: 445 -----KRAISEETKQSKILAYITALKKLCNHPKL-IYDTIKSGNPGTTGFEDCIRFFPPE 498
K+ + ++++L ++AL+K+CNHP L +Y T + E+ + F
Sbjct: 602 FVLHEKKYVETGRYRARLLIALSALRKICNHPDLFVYSTPLDSDEDINMSEESLETF--- 658
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
G W + SGKM V+ LL + ++ R +L + Q + + L +
Sbjct: 659 -------------GYW-KRSGKMIVVQSLLK-IWKKQGHRALLFTQGRQMMHILESLVQH 703
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
+Y YLR+DGTT +S+RQ+ + FND S + FVFLL+++ GG G+NL G NR++++DPDW
Sbjct: 704 EKYSYLRMDGTTPMSQRQETIRLFNDDS-SYFVFLLTTRVGGLGVNLTGANRVIIYDPDW 762
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
NPA D QA R WR GQ K V IYR ++ GTIEEK+Y RQ+ KV+ +
Sbjct: 763 NPATDAQARERAWRIGQSKNVTIYRLITAGTIEEKIYHRQIF-----KVLLSNKVLEDPR 817
Query: 679 QGNFLSTEDLRDLFTFHDDV 698
Q T DL +LF F++ +
Sbjct: 818 QRRLFKTSDLVELFNFNESI 837
>gi|395858719|ref|XP_003801707.1| PREDICTED: DNA excision repair protein ERCC-6 [Otolemur garnettii]
Length = 1490
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 263/548 (47%), Gaps = 68/548 (12%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 498 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 549
Query: 234 CQGFDGKPM------VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
+ + IIV PT+++ W E W +A+ T
Sbjct: 550 YSKIRTRGSNYRYEGLGPTIIVCPTTVMHQWVKEFHTWWPPF--RVAILHETGSYTHKKE 607
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
D +LI SY R+ S + +I DE H+++N
Sbjct: 608 KLIRDIAHCHGILITSYSYIRLMQDDISRYD-WHYVILDEGHKIRNPNAAVTLACKQFRT 666
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L E +++ +F PG LG F + I G A+ + K
Sbjct: 667 PHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTA 726
Query: 389 IERSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR ++ +S LP K +V+ C+LT Q ++Y +F+ SK V
Sbjct: 727 YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKIYQNFVDSKEVYG 786
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
++ E + I + AL+K+CNHP D G G + E+ + G
Sbjct: 787 ILNGEMQ---IFPGLIALRKICNHP----DLFSGGTKNLKGLPE------DELEEDQFGY 833
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
W + SGKM V+ LL + + R++L S Q LD+ R ++Y YL++
Sbjct: 834 W--------KRSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKM 884
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+ D QA
Sbjct: 885 DGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQA 943
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTE 686
R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F +
Sbjct: 944 RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFKSN 998
Query: 687 DLRDLFTF 694
DL +LF+
Sbjct: 999 DLYELFSL 1006
>gi|332222825|ref|XP_003260570.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
isoform 1 [Nomascus leucogenys]
Length = 701
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 292/601 (48%), Gaps = 96/601 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++ IHG CIL DDMGLGKT+
Sbjct: 109 SDDGDSIPYTIN----RYLRDYQREGARFLY--------GHYIHGRGCILGDDMGLGKTV 156
Query: 224 QSIALLYTLLCQG------------FDGKPMVKKA---------IIVTPTSLVSNWEAEI 262
Q I+ L +L + F + M K+ +IV P S++ NW+ E+
Sbjct: 157 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDEL 216
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 217 DTW--GYFRVTILHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSA 268
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+ +E + ++++ PG+LG Y
Sbjct: 269 VIVDEAHRIKNPKARVTEVMKALKCSVRIGLTGTILQNNTKELWCVMDWAVPGLLGSRTY 328
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 329 FKKQFSDPVEQGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 388
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 389 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 448
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS 518
+T L+K+ NH L+ S T C + F P+ F +S + + S
Sbjct: 449 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYS 507
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+
Sbjct: 508 GKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 567 VKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRD 625
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFH 695
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H
Sbjct: 626 VKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIH 682
Query: 696 D 696
+
Sbjct: 683 N 683
>gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa]
Length = 1112
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 255/543 (46%), Gaps = 69/543 (12%)
Query: 184 LRPHQREGVQFMFE----CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L +Q+ GV+++ E CV G ILAD+MGLGKT+Q I+ L L +
Sbjct: 250 LYKYQKTGVRWLNELHNQCVGG----------ILADEMGLGKTVQVISFLRALAFSRLED 299
Query: 240 KPM----VKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTDPC 294
+ + +I+ PT+L+ W E W RV ++ S I
Sbjct: 300 RGFSFFGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIRKMVVAR 359
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------------- 339
S VL+ SY TF + K + +I DE H+++N +
Sbjct: 360 SDGNVLLTSYGTF-ARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPHRLILS 418
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+N L E +++V+F PG LG F + I G AT + + + + L
Sbjct: 419 GSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYKCACIL 478
Query: 396 SAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
+N ++LRR + +S HLP K +V+ C +TP Q LY ++ S R +S +T
Sbjct: 479 RDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLYEEYLSSHECSRILSGKT- 537
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ IT L+KLCNHP LI N + E+ + F P
Sbjct: 538 -DAFVGLIT-LRKLCNHPDLITGGPNKFNDYSVTAENEMDFGAPCR-------------- 581
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
SGKM VL LL +Q+ D +++L S Q L + + + Y YLR+DGTT +
Sbjct: 582 ----SGKMQVLKALLKLWKQQ-DQKVLLFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVR 636
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
RQ LV FN + F+FLL+++ GG G+NL G NR+V+FDPDWNP+ D QA R WR
Sbjct: 637 SRQLLVEKFNKVDEI-FIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRI 695
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
GQ++ V IYR L+ GTIEEK+Y RQ+ K L I + Q F T +L +LF
Sbjct: 696 GQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVD-----PRQRRFFKTNELHELFC 750
Query: 694 FHD 696
D
Sbjct: 751 LGD 753
>gi|393911645|gb|EFO25268.2| hypothetical protein LOAG_03215 [Loa loa]
Length = 1113
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 255/543 (46%), Gaps = 69/543 (12%)
Query: 184 LRPHQREGVQFMFE----CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L +Q+ GV+++ E CV G ILAD+MGLGKT+Q I+ L L +
Sbjct: 250 LYKYQKTGVRWLNELHNQCVGG----------ILADEMGLGKTVQVISFLRALAFSRLED 299
Query: 240 KPM----VKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTDPC 294
+ + +I+ PT+L+ W E W RV ++ S I
Sbjct: 300 RGFSFFGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIRKMVVAR 359
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------------- 339
S VL+ SY TF + K + +I DE H+++N +
Sbjct: 360 SDGNVLLTSYGTF-ARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPHRLILS 418
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+N L E +++V+F PG LG F + I G AT + + + + L
Sbjct: 419 GSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYKCACIL 478
Query: 396 SAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
+N ++LRR + +S HLP K +V+ C +TP Q LY ++ S R +S +T
Sbjct: 479 RDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLYEEYLSSHECSRILSGKT- 537
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ IT L+KLCNHP LI N + E+ + F P
Sbjct: 538 -DAFVGLIT-LRKLCNHPDLITGGPNKFNDYSVTAENEMDFGAPCR-------------- 581
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
SGKM VL LL +Q+ D +++L S Q L + + + Y YLR+DGTT +
Sbjct: 582 ----SGKMQVLKALLKLWKQQ-DQKVLLFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVR 636
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
RQ LV FN + F+FLL+++ GG G+NL G NR+V+FDPDWNP+ D QA R WR
Sbjct: 637 SRQLLVEKFNKVDEI-FIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRI 695
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
GQ++ V IYR L+ GTIEEK+Y RQ+ K L I + Q F T +L +LF
Sbjct: 696 GQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVD-----PRQRRFFKTNELHELFC 750
Query: 694 FHD 696
D
Sbjct: 751 LGD 753
>gi|260801499|ref|XP_002595633.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
gi|229280880|gb|EEN51645.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
Length = 1464
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 268/543 (49%), Gaps = 73/543 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L +Q+ GV++++E S G I+ D+MGLGKT+Q+I LY L + ++
Sbjct: 515 LYKYQQTGVRWLWELHSQQA------GGIMGDEMGLGKTIQAIVFLYGLQYGNVRNRGIM 568
Query: 244 KKAI------IVTPTSLVSNWEAEIKKWVGGRVQLIALCES-----TRDDVVSGIDSFTD 292
K I +V P +++ W E W RV++ L ES ++D ++ I
Sbjct: 569 TKYIGLGPCLVVAPVTVLHQWVREFHTWFP-RVRVAILHESGTFTTSKDRLIREI----- 622
Query: 293 PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLT------------- 338
VL+ SY+ + +I DE H+++N D +T
Sbjct: 623 -ARDRGVLVTSYQEVNLRQDSL-LHYDWHYVILDEGHKIRNPDAKVTLACKQFRTPHRII 680
Query: 339 -----NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
+N+L E +++ +F PG LG F + I G AT + + + +
Sbjct: 681 LSGSPMQNNLRELWSLCDFVFPGKLGTLPVFMEQFSVPITQGGYANATPVQVQTAYKCAC 740
Query: 394 ELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
L +N ++LRR + ++ +LP K +V+ C++T Q E Y ++ S+ ++ +
Sbjct: 741 VLRDTINPYLLRRMKNDVKMNLNLPNKSEQVLFCRITEEQKEAYKDYLGSRECQQILD-- 798
Query: 452 TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGD 511
Q ++ A + L+K+CNHP L+ +G P D + +
Sbjct: 799 -GQYQVFAGLITLRKICNHPDLV-----TGGPRIMVGTDESTLTKDQHY----------- 841
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
G W + SGKM V+ LL + + R++L S Q LDL + +++ Y Y+R+DGTT+
Sbjct: 842 GYW-KRSGKMIVVNTLL-KMWHKQGHRVLLFSQSKQMLDLMEEFVQDQSYTYMRMDGTTT 899
Query: 572 ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
IS RQ + FN + + FVFLL+++ GG G+NL G NR+++FDPDWNP+ D QA R W
Sbjct: 900 ISSRQPKITKFNKDT-SIFVFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDMQARERAW 958
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
R GQ K V IYR L+TGTIEEK+Y RQ+ K+ L + ++ Q F + D+ +L
Sbjct: 959 RIGQSKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKD-----PRQRRFFKSNDMYEL 1013
Query: 692 FTF 694
FT
Sbjct: 1014 FTL 1016
>gi|395855223|ref|XP_003800069.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1253
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 277/564 (49%), Gaps = 76/564 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F++ L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 96 LFEHQKEGVAFLYS-----LYRDGRKGGILADDMGLGKTVQIIAFLSGM----FDAS-LV 145
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQV 299
+++ PT+L++ W E +W G +++ ++D+ ++ ++ Q+
Sbjct: 146 NHVLLIIPTNLINTWVKEFVEWTPG-MRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQM 204
Query: 300 LIVSYETFRMHSSKFSCSESC-DLLICDEAHRLKNDQTLT----------NR-------- 340
LI ++ S F+ E D +I DEAH++K T + NR
Sbjct: 205 LINNWRQL----SSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLTGTPI 260
Query: 341 -NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
N+L+E +++ +F G +LG F+ YE I R+ AT EK LG + S L A
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISENLMAI 320
Query: 399 VNQFILRRTNALL----SNHLPPKIIE--------------------VVCCKLTPLQSEL 434
+ + LRRT + S++L +I E ++ +L PLQ E+
Sbjct: 321 IKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI-YDTIKSGNPGTTGFEDCIR 493
Y F+ ++K + E LA + LKKLC+HP+L+ + N GT F +
Sbjct: 381 YRKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSARACQLLNLGTVKF-SALD 436
Query: 494 FFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
E F D +E SGKM L LL LR +V S Q L++
Sbjct: 437 GNEGEDFPDMDHIDQITDETLMEESGKMIFLMDLLKRLRDEGHQTLVF-SQSRQILNIIE 495
Query: 554 QLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
L + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG GL L R+V
Sbjct: 496 HLLKNRHFKTLRIDGTITHLLEREKRINLFQK-NKDYSVFLLTTQVGGVGLTLTAATRVV 554
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L + +
Sbjct: 555 IFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIR----QT 610
Query: 673 TDSSATQGNFLSTEDLRDLFTFHD 696
T + S ++LR+LFT D
Sbjct: 611 TGEKKNPFRYFSKQELRELFTIED 634
>gi|301780254|ref|XP_002925544.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1240
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 271/568 (47%), Gaps = 90/568 (15%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
HQ+EGV F++ L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 99 HQKEGVAFLYS-----LYRDGRKGGILADDMGLGKTVQIIAFLSGM----FDAT-LVSHV 148
Query: 247 IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
+++ PT+L+S W E KW G +++ A ++D+ + V+I +Y+
Sbjct: 149 LLIMPTNLISTWIKEFVKWTPG-MRVKAFHGPSKDERTRNLSRIQQRNG---VIITTYQM 204
Query: 307 FRMHSSKFSCSES----CDLLICDEAHRLKNDQTLT----------NR---------NDL 343
+ + S D +I DEAH++K T + NR N+L
Sbjct: 205 LINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTGTPIQNNL 264
Query: 344 EEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
+E +++ +F G +LG F+ YE I RE AT EK LG + S L A + +
Sbjct: 265 QELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPY 324
Query: 403 ILRRTNALLSNHLP--PKI--------IEVVC--------------CKLTPLQSELYNHF 438
LRRT + P++ ++ +C +L PLQ E+Y F
Sbjct: 325 FLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKF 384
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI---------YDTIKSGNPGTTGFE 489
+ ++K + E LA + LKKLC+HP+L+ ++K G E
Sbjct: 385 VSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSARACHLLNLGSVKFSVQGANEGE 441
Query: 490 DCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTL 549
D + + D +E SGKM L LL LR +V S Q L
Sbjct: 442 DASDVDHIDQIT---------DDTLMEESGKMIFLIELLKRLRDEGHQTLVF-SQSRQIL 491
Query: 550 DLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
++ L + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG GL L
Sbjct: 492 NIIEHLLKNRHFKILRIDGTVTHLVEREKRINLFQQ-NKDYSVFLLTTQVGGVGLTLTAA 550
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L +
Sbjct: 551 TRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIR-- 608
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ T + + ++LR+LFT D
Sbjct: 609 --QTTGDKKNPFRYFTKQELRELFTIED 634
>gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Meleagris gallopavo]
Length = 1498
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 266/551 (48%), Gaps = 73/551 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 496 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 547
Query: 234 CQGFDGKPM------VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSG 286
+ + +IV P +++ W E W RV ++ S + V
Sbjct: 548 YSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKL 607
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------- 339
I S +LI SY R+ S +I DE H+++N
Sbjct: 608 IREI---ASCHGILITSYSYIRLMQDNIH-SYDWHYVILDEGHKIRNPNAAVTLACKQFR 663
Query: 340 ------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
+N+L+E +++ +F PG LG F + I G A+ + K
Sbjct: 664 TPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKT 723
Query: 388 GIERSSELSAKVNQFILRRTNA--LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ + L +N ++LRR A +S LP K +V+ C+LT Q +Y +FI SK V
Sbjct: 724 AYKCACVLRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRRVYQNFIDSKEVY 783
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF--SGR 503
+ ++ + + + + + AL+K+CNHP L SG P ++ P + +
Sbjct: 784 QILNGDMQ---VFSGLVALRKICNHPDLF-----SGGP------KILKCLPDADLEEADQ 829
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
G W + SGKM V+ LL + + R++ + Q L + R+R Y Y
Sbjct: 830 FGYW--------KRSGKMIVVESLL-KIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSY 880
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
LR+DGTT+I+ RQ L+ +N+ K+ F+FLL+++ GG G+NL G +R++++DPDWNP+ D
Sbjct: 881 LRMDGTTTIASRQPLITRYNE-DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTD 939
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 940 TQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFF 994
Query: 684 STEDLRDLFTF 694
+ DL +LFT
Sbjct: 995 KSNDLYELFTL 1005
>gi|334332813|ref|XP_001368542.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Monodelphis domestica]
Length = 1204
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 290/599 (48%), Gaps = 91/599 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
++ G +P T++ R+LR +QREG QF++ S G GCIL DDMGLGKT+Q
Sbjct: 122 SEDGICIPYTIN----RYLRDYQREGAQFLYGHYS-----LG-RGCILGDDMGLGKTVQV 171
Query: 226 IALLYTLLCQGFDGKPM---------------------VKKAIIVTPTSLVSNWEAEIKK 264
IA L +L + K + K +IV P S++ NW+ E+
Sbjct: 172 IAFLAAVLRKKGTRKDIENNMPEFLLKNKKKESSISAPKKMFLIVAPLSVLYNWKDELNT 231
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L + +D+ ++ I ++ + +YET R+ + E +I
Sbjct: 232 W--GYFKVTILHGNKKDNELNRIKQ-----GKCEIALTTYETLRLCLDDLNSIE-WSAII 283
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG YF+
Sbjct: 284 VDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAMPGLLGSMTYFK 343
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V C
Sbjct: 344 KQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYC 403
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V + ET ++ +Y+
Sbjct: 404 SLTEFQKAVYQTVLETEDVTLILRAREPCTCHSGRKRKNCCYKTNSYGETVKALYFSYLA 463
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFED-CIRFFPP-EMFSGRSGSWTGGDGAWVELSGK 520
L+K+ NH L+ + + T + C + F + F +S + + SGK
Sbjct: 464 ILQKVSNHAALLQASSNTSKQQETHLKRICNQVFSKFKDFMQKSKDAAFETISDPKYSGK 523
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL H + + D+++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 524 MKVLQQLLNHCK-KNRDKVLLFSFSTKLLDVLEQYCMATGLDYRRLDGSTKSEERVKIVK 582
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN +++ + L+S+ AGG GLN +G N +V+FDP WNPAND QA R +R GQ + V
Sbjct: 583 EFNS-TQDINICLVSTMAGGLGLNFVGANVVVIFDPTWNPANDLQAIDRAYRIGQCRDVK 641
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFHD 696
++R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF H+
Sbjct: 642 VFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGIHN 697
>gi|281338942|gb|EFB14526.1| hypothetical protein PANDA_015067 [Ailuropoda melanoleuca]
Length = 1218
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 271/568 (47%), Gaps = 90/568 (15%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
HQ+EGV F++ L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 79 HQKEGVAFLYS-----LYRDGRKGGILADDMGLGKTVQIIAFLSGM----FDAT-LVSHV 128
Query: 247 IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
+++ PT+L+S W E KW G +++ A ++D+ + V+I +Y+
Sbjct: 129 LLIMPTNLISTWIKEFVKWTPG-MRVKAFHGPSKDERTRNLSRIQQRNG---VIITTYQM 184
Query: 307 FRMHSSKFSCSES----CDLLICDEAHRLKNDQTLT----------NR---------NDL 343
+ + S D +I DEAH++K T + NR N+L
Sbjct: 185 LINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTGTPIQNNL 244
Query: 344 EEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
+E +++ +F G +LG F+ YE I RE AT EK LG + S L A + +
Sbjct: 245 QELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPY 304
Query: 403 ILRRTNALLSNHLP--PKI--------IEVVC--------------CKLTPLQSELYNHF 438
LRRT + P++ ++ +C +L PLQ E+Y F
Sbjct: 305 FLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKF 364
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI---------YDTIKSGNPGTTGFE 489
+ ++K + E LA + LKKLC+HP+L+ ++K G E
Sbjct: 365 VSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSARACHLLNLGSVKFSVQGANEGE 421
Query: 490 DCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTL 549
D + + D +E SGKM L LL LR +V S Q L
Sbjct: 422 DASDVDHIDQIT---------DDTLMEESGKMIFLIELLKRLRDEGHQTLVF-SQSRQIL 471
Query: 550 DLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
++ L + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG GL L
Sbjct: 472 NIIEHLLKNRHFKILRIDGTVTHLVEREKRINLFQQ-NKDYSVFLLTTQVGGVGLTLTAA 530
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L +
Sbjct: 531 TRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIR-- 588
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ T + + ++LR+LFT D
Sbjct: 589 --QTTGDKKNPFRYFTKQELRELFTIED 614
>gi|348507212|ref|XP_003441150.1| PREDICTED: DNA excision repair protein ERCC-6 [Oreochromis niloticus]
Length = 1436
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 266/552 (48%), Gaps = 71/552 (12%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++M+E C G IL D+MGLGKT+Q I+ L L
Sbjct: 489 VPGFLWKKLYKYQQTGVRWMWELHCQQA--------GGILGDEMGLGKTIQVISFLAGLS 540
Query: 234 CQGFDGK------PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
+ + +IV P +++ W E W + +A+ T +
Sbjct: 541 YSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWP--LFRVAVLHETGSFTSNKE 598
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
+ + +LI SY R + +I DE H+++N
Sbjct: 599 KLIPEIAACHGILITSYSAVRNMQETLQLYD-WHYIILDEGHKIRNPNAGVTVACKQFRT 657
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L+E +++ +F PG LG F + I G A+ + +
Sbjct: 658 PHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTA 717
Query: 389 IERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR A + +L P K +V+ C+LT Q ++Y F+ SK V +
Sbjct: 718 FKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQ 777
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS-- 504
++ + + + + + AL+K+CNHP L SG P +R P + +
Sbjct: 778 ILNGDMQ---VFSGLIALRKICNHPDLF-----SGGP------RILRGIPEDQLTEEEHF 823
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
G W + SGK+ V+ LL L R R++L + Q LD+ RE Y YL
Sbjct: 824 GFW--------KRSGKLIVVESLL-RLWFRQSHRVLLFTQSRQMLDILEVFVRENNYSYL 874
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
++DGTT+IS RQ L+ +N+ K+ F+FLL++K GG G+NL G NR++++DPDWNP+ D
Sbjct: 875 KMDGTTTISSRQPLIARYNE-DKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDT 933
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA R WR GQK++V IYR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 934 QARERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFK 988
Query: 685 TEDLRDLFTFHD 696
+ D+ +LFT D
Sbjct: 989 SNDIYELFTLAD 1000
>gi|401623518|gb|EJS41615.1| isw2p [Saccharomyces arboricola H-6]
Length = 1115
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 180 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 232
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 233 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNII----LQARFDVL 283
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 284 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 342
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+A F ++E + +E+++++ ++ +L + +N
Sbjct: 343 NLHELWALLNFLLPDIFGDSAIFDEWFEQN--------NSEQDQEIVVQ---QLHSVLNP 391
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR + + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 392 FLLRRVKSDVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 451
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + +G
Sbjct: 452 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNAG 486
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R Y Y R+DG+TS +R + +
Sbjct: 487 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFREYEYCRIDGSTSHEERIEAI 545
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 546 DDYNKPDSEKFVFLLTTRAGGLGINLVAADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 605
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 606 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 659
>gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii]
Length = 1350
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 289/601 (48%), Gaps = 108/601 (17%)
Query: 103 DQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVD----PLVL 158
++L + L KR+ S + V + + N+ D R EE++ L D ++
Sbjct: 175 EKLEQLLAETKRYTEKLSGQRVQINLQNKKDKNRRCAMTEKEEDYVLLKEADDDDDTFII 234
Query: 159 WQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
QP QN G + +P+Q EG+ ++++ +N ILAD+MG
Sbjct: 235 KQP---QNISGTM-------------KPYQIEGLNWLYQLYRHKING------ILADEMG 272
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW---------VGGR 269
LGKTLQ+I+LL C K + +K II+ P S + NW EIKKW G +
Sbjct: 273 LGKTLQTISLL----CYLRFNKNIKRKNIIICPRSTLDNWYEEIKKWCSEMKPFKYYGSK 328
Query: 270 VQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
Q L ++ S VL+ +YE S + L+ DEAH
Sbjct: 329 EQRKELNKTVLH-------------SDYDVLLTTYEIVIKDKSALYDIDWF-FLVIDEAH 374
Query: 330 RLKNDQTL----------TNR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
R+KND+++ NR N+L+E ++++NF P I ++ F +
Sbjct: 375 RIKNDKSVLSSSVRFLKSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNI 434
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPL 430
S I + +E ++L + F+LRR + LPPK + ++ L
Sbjct: 435 SKISTNDNKQSE--------IITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKL 486
Query: 431 QSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Q +LY+ I SKN+ + ++++L + L+K CNHP L +D I+
Sbjct: 487 QKKLYSD-ILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYL-FDGIEE---------- 534
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
PP + G+ +E SGKM +L +LL L+ + + R++L S T+ LD
Sbjct: 535 -----PP---------YIEGNHL-IETSGKMSLLDKLLPRLK-KENSRVLLFSQMTRLLD 578
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ CR ++Y YLR+DG+T +RQ +N FN+P+ F+FLLS++AGG G+NL +
Sbjct: 579 IIDDYCRWKKYEYLRIDGSTVGDERQIRINKFNEPNSKYFIFLLSTRAGGIGINLTTADI 638
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
++LFD D+NP D QA R R GQKKRV +YRF++ ++EEK+ +R K L +I Q
Sbjct: 639 VILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQ 698
Query: 671 E 671
+
Sbjct: 699 K 699
>gi|344271724|ref|XP_003407687.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Loxodonta africana]
Length = 713
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 292/602 (48%), Gaps = 98/602 (16%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 121 SEDGDCIPYTIN----RYLRDYQREGAQFLYGHYIQG-------RGCILGDDMGLGKTVQ 169
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA---------IIVTPTSLVSNWEAEIK 263
I+ L +L + F + M K+ +IV P S++ NW E+
Sbjct: 170 VISFLAAVLHKKGTREDIENNMPEFLLRSMKKETPSCTAKKMFLIVAPLSVLYNWRDELD 229
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
W G ++I L + +D + + ++ + +YET R+ +F+ E +
Sbjct: 230 TW--GYFRVIVLHGNKKDSELIRVKQ-----GKCEIALTTYETLRLCLDEFNSLEW-SAV 281
Query: 324 ICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
I DEAHR+KN +N+++E + ++++ PG+LG ++F
Sbjct: 282 IVDEAHRIKNPTARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRSHF 341
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 342 KKQFSDPVEHGQRHTATKRELATGRKAMRRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVY 401
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYI 461
C LT Q +Y + ++++ + ET ++ +Y+
Sbjct: 402 CSLTDFQKAVYQTVLETEDITLILRSSEPCTCNSGRKRRNCCYKTNSQGETVKTLYFSYL 461
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF---PPEMFSGRSGSW-TGGDGAWVEL 517
L+K+ NH L+ S T C + F P + + ++ T D +
Sbjct: 462 AVLQKVANHVALLQAASTSEQQKTLISRICDQVFSRFPDFVRKSKDAAFETISDPKY--- 518
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGKM VL +LL H R + D+++L S T+ LD+ Q C + RLDG+T +R K
Sbjct: 519 SGKMKVLQQLLNHCR-KNKDKVLLFSFSTKLLDVLQQYCMAAGLDFRRLDGSTKSEERIK 577
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
+V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 578 IVKEFNS-AQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCR 636
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTF 694
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF
Sbjct: 637 DVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHRGELFGI 693
Query: 695 HD 696
H+
Sbjct: 694 HN 695
>gi|303390601|ref|XP_003073531.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302678|gb|ADM12171.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 688
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 272/538 (50%), Gaps = 81/538 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L +QR+GV +M GL G +LADDMGLGKT+Q I L L F K +
Sbjct: 143 LFEYQRDGVAWML----GLYKRE--KGGVLADDMGLGKTIQMIVFLAVL----FHNKS-I 191
Query: 244 KKAIIVTPTSLVSNWEAEIKKWV-GGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
+KA+I+ P ++VS W AE K++ RV E R V ++
Sbjct: 192 EKALILCPATIVSQWMAEWKRFYPFVRVFFGFPAEDCRG-----------------VYLM 234
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ---TLTNR----------------NDL 343
SYE F+ + D L+ DE H++KN TL+ + N+L
Sbjct: 235 SYEKFKARAKDLLW----DTLVLDEGHKIKNRNAQITLSVKKVRSRSRFVLSGTPIQNNL 290
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E ++M +F NPG+LG F +E I G +A+ + + S L + + +I
Sbjct: 291 GELWSMFDFVNPGLLGSHTSFHEEFEEIIRRGGYKSASNLQVEKAYRHSLMLRSLIEPYI 350
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRRT + +S+ LP K +++ C LTP+Q ELYN + SK++ + + ++ +L+ I+
Sbjct: 351 LRRTKSQISHKLPSKEDKIIFCTLTPIQIELYNRILESKHIMKVL---IGKANLLSGISM 407
Query: 464 LKKLCNHPKLIYDTIKSGN-------PGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
L+K+CNHP+L + G+ G E+ + E V
Sbjct: 408 LRKVCNHPRLFIPRKEDGSEDLSEEASGEKNNEETLGLLKKE----------ESQYGLVS 457
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
S K+ +L LL + +++++ S + LD+ + C E+ Y YLR+DG TS S R
Sbjct: 458 SSCKIKILMDLLKKWKSE-GNKVLVFSQTIRMLDIIEK-CVEK-YAYLRMDGRTSTSSRS 514
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
LV+ FN + F+FLL++K GG GLNL G +R+V++DPDWNP+ D QA R WR GQ+
Sbjct: 515 SLVDRFNKDD-SIFMFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQR 573
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
K V IYRF+ TIEEKVYQ+Q+ K+ L K + S+ F + + +LF+F
Sbjct: 574 KGVEIYRFICKDTIEEKVYQKQIFKDLLGKKVL-----SNPGLSRFFNKSCINELFSF 626
>gi|307209151|gb|EFN86289.1| DNA excision repair protein ERCC-6 [Harpegnathos saltator]
Length = 1005
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 278/569 (48%), Gaps = 75/569 (13%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP ++ L R+ Q+ VQ+++E L G +L D+MGLGKT+Q IA L
Sbjct: 252 VPQSIWDRLYRY----QKIAVQWLWELHGRKL------GGLLGDEMGLGKTVQVIAFLAG 301
Query: 232 LLCQ---GFDGKPM-VKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSG 286
L C +G+ + I++ P +L+ W +W RV ++ + D
Sbjct: 302 LDCSELLSHNGRFRGLGPTIVICPVTLMEQWVKHFHEWWPFVRVVVLHHTGGYKGDPEDL 361
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
I+S + +LI+SY H S +I DE H ++N Q +R
Sbjct: 362 IESL----QTGGILIISYNGVLKHKD-LIISSQWHYVILDEGHTIRNPQVKISRAVKRLQ 416
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
N L+E +++ +F PG LG F + + I G AT ++
Sbjct: 417 TPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPVFLEHCASPITRGGYVNATPLQEAT 476
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
++ ++ L + ++LRRT + +HL P K +V+ C LT Q +LY ++ S++V
Sbjct: 477 ALQVATMLKDTITPYLLRRTKTDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYLCSEDVS 536
Query: 446 RAISEETK-------QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF-EDCIRFFPP 497
+ E+T +++ L ++AL+K+CNHP L T + + E+ + F
Sbjct: 537 FILHEKTNHHESGRYRARFLIALSALRKICNHPDLFLYTRQLDSEEDIDLSEELLEKF-- 594
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
G W + +GKM V+ LL + Q+ R++L + Q + + L +
Sbjct: 595 --------------GYW-KRAGKMTVVRSLL-KIWQKQGHRVLLFTQGIQMIHILESLLQ 638
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
Y YLRLDG+T++S+RQ ++ FN+ PS FVFLL+++ GG GLNL G NR++++DP
Sbjct: 639 HEGYTYLRLDGSTAMSQRQHVIQMFNNNPSY--FVFLLTTRVGGLGLNLTGANRVIIYDP 696
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNPA D QA AR WR GQ K+V IYR ++ GTIEEK+Y RQ+ K L + E
Sbjct: 697 DWNPATDAQARARAWRIGQNKQVTIYRLITAGTIEEKMYHRQIFKLLLSNKVLDE----- 751
Query: 677 ATQGNFLSTEDLRDLFTFHDDVRSEIHEN 705
Q T DL +LF ++ E E+
Sbjct: 752 PRQRRLFKTSDLVELFNLNEPTNGETSES 780
>gi|224052526|ref|XP_002188227.1| PREDICTED: DNA excision repair protein ERCC-6 [Taeniopygia guttata]
Length = 1449
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 266/550 (48%), Gaps = 71/550 (12%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q IA L L
Sbjct: 456 VPGFLFKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLS 507
Query: 234 CQGFDGKPM------VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
+ + +IV P +++ W E W +A+ T S +
Sbjct: 508 YSNMRTRGSNYRYQGLGPTVIVCPATVLHQWVKEFHTWWPPF--RVAVLHETGSYTKSKV 565
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
+ S +LI SY R+ + +I DE H+++N
Sbjct: 566 KLIHEIASCHGILITSYSYIRLMQDDIHTYD-WHYVILDEGHKIRNPNAAVTLACKQFRT 624
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L+E +++ +F PG LG F + I G A+ + K
Sbjct: 625 PHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYCNASPVQVKTA 684
Query: 389 IERSSELSAKVNQFILRRTNA--LLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR A +S LP K +V+ C+LT Q ++Y ++I+SK V +
Sbjct: 685 YKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTEEQRQIYQNYINSKEVYQ 744
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDT--IKSGNPGTTGFEDCIRFFPPEMFSGRS 504
++ + + IL ++ L+K+CNHP + D+ I P ED P F
Sbjct: 745 ILNGDMQ---ILLGLSTLRKICNHPDFVADSPRILKSVPDAEA-ED------PNQF---- 790
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
G W + SGKM V+ LL + + R++ + Q + + R R Y YL
Sbjct: 791 -------GYW-KRSGKMIVVESLL-KIWHKQGHRVLFFTQSRQMMQILEVFVRYRNYSYL 841
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
R+DGTT+++ RQ LV +N+ K+ F+FLL+++ GG G+NL+G +R++++DPDWNP+ D
Sbjct: 842 RMDGTTAVASRQPLVTKYNE-DKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDWNPSVDT 900
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA R WR GQKK V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 901 QARERAWRIGQKKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQNRFFK 955
Query: 685 TEDLRDLFTF 694
+ DL +LFT
Sbjct: 956 SNDLYELFTL 965
>gi|345785206|ref|XP_533502.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Canis lupus familiaris]
Length = 800
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 172/573 (30%), Positives = 280/573 (48%), Gaps = 92/573 (16%)
Query: 164 PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKT 222
P + G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT
Sbjct: 206 PLSADGDSIPYTIN----RYLRDYQREGAQFLYAHFIQG-------KGCILGDDMGLGKT 254
Query: 223 LQSIALLYTLLCQG------------FDGKPMVKKA---------IIVTPTSLVSNWEAE 261
+Q I+ L +L + F + M K+ +IV P S++ NW E
Sbjct: 255 VQVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWRDE 314
Query: 262 IKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCD 321
+ W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 315 LDTW--GYFRVTILHGNKKDNELVRVKQ-----RKCEIALTTYETLRLCLDELNSLEW-S 366
Query: 322 LLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAA 362
+I DEAH++KN + +N+++E + ++++ PG+LG
Sbjct: 367 AVIVDEAHKIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRI 426
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEV 422
+F++ + + G+ TAT+ E G + L+ ++ + LRRT L+ + LP K +
Sbjct: 427 HFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKMMSGWFLRRTKTLIKDQLPKKEDRM 486
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILA 459
V C LT Q +Y + +K+V + ET ++ +
Sbjct: 487 VYCSLTDFQKAVYQTVLETKDVTLILQSSEPCSCSSGRKRRNCCYKTNSHGETVKTLYFS 546
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF---PPEMFSGRSGSW-TGGDGAWV 515
Y+ L+K+ NH L+ S T C + F P + + S+ T D +
Sbjct: 547 YLAVLQKVANHVALLQSASTSKQQETLIKRICDQVFSKFPDFVQKSKDASFETLSDPKY- 605
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
SGKM VL +LL H R + D+I+L S T+ LD+ Q C + Y RLDG+T +R
Sbjct: 606 --SGKMKVLQQLLNHCR-KNKDKILLFSFSTKLLDVLQQYCMAAGFDYRRLDGSTKSEER 662
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
K+V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ
Sbjct: 663 IKIVKEFNS-TQDVNICLVSTMAGGVGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQ 721
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+ V ++R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 722 CRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVV 754
>gi|327290056|ref|XP_003229740.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 283/581 (48%), Gaps = 83/581 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F++ L G ILADDMGLGKT+Q IA L + G +V
Sbjct: 67 LFEHQKEGVAFLYN-----LYHKKRQGGILADDMGLGKTIQIIAFLSGMFDAG-----LV 116
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI-ALCESTRDDVVSGIDSFTDPCSSLQVLI 301
+ +++ P +LV+NW E WV G RV++ + R+ + I T VL+
Sbjct: 117 RSVLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQNLEQIQRRTG------VLL 170
Query: 302 VSYETFRMHSSKFSCSES----CDLLICDEAHRLKNDQTLTNR----------------- 340
SY+ + + S + + +I DEAH++K+ T +
Sbjct: 171 TSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVYGIPAVNRILLTGTP 230
Query: 341 --NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
N+L E +A+ +F G +LG A F+ YE+ I+ RE AT EK LG++ S L A
Sbjct: 231 VQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLGEKALGLKISQNLMA 290
Query: 398 KVNQFILRRTN----------------------ALLSNHLPPKIIEVVCCKLTPLQSELY 435
+ + LRR+ AL LP K +V L P+Q ++Y
Sbjct: 291 IIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDFIVWVYLAPMQEDIY 350
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
+F+ ++K + T +S LA +T LKKLC+HP+L+ + + G E
Sbjct: 351 RNFLSLDHIKELLM--TTRSP-LAELTVLKKLCDHPRLL----SAQACASLGLEVSEYSE 403
Query: 496 PPEM--FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
P + S D +E SGK+ L LL L++ +V S + LD+
Sbjct: 404 PTDQSTLSMTQDIKRVSDKLLIEESGKLVFLVALLEKLQEEGHQTLVF-SQSRKMLDIIE 462
Query: 554 QLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
+ +R + +R+DGT T +++R+K V F K+ VFLL+++ GG GL L R+V
Sbjct: 463 HILTKRSFRLMRVDGTVTCLAEREKRVRQFQ-MDKSYSVFLLTTQVGGVGLTLTSATRVV 521
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
+FDP WNPA D QA R +R GQK+ V IYR ++ GT+EEK+Y+RQ+ K+ L IQQ
Sbjct: 522 IFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSL---IQQST 578
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIH---ENMHCTR 710
D + + ++LR+LFT D S +++H T+
Sbjct: 579 GDKK-NPYRYFTQQELRELFTLEDTTSSATQLQLQSLHATQ 618
>gi|395819328|ref|XP_003783046.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Otolemur garnettii]
Length = 702
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 292/608 (48%), Gaps = 104/608 (17%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 110 SEDGDSIPYTIN----RYLRDYQREGAQFLYGHYIKG-------RGCILGDDMGLGKTVQ 158
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA---------IIVTPTSLVSNWEAEIK 263
I+ L +L + F + M K+ +IV P S++ NW+ E+
Sbjct: 159 VISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPPSSTARKMFLIVAPLSVLYNWKDELD 218
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
W G ++ L + +D+ + I ++ + +YET R+ + + E ++
Sbjct: 219 TW--GYFRVTVLHGNKKDNELIRIKQ-----RKCEIALTTYETLRLCLDELNSLEWSGVI 271
Query: 324 ICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
+ DEAHR+KN + +N+++E + ++++ PG+LG +F
Sbjct: 272 V-DEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRTHF 330
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 331 KKQFSDPVEHGQRHTATKRELATGRKAMRRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVY 390
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYI 461
C LT Q +Y + +++V + ET ++ +Y+
Sbjct: 391 CSLTDFQKAVYQTVLETEDVTLILHSSEPCTCSSGRKRRNCCYKTNSQGETVKTLYFSYL 450
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS- 518
L+K+ NH L+ S T C + F P+ D A+ LS
Sbjct: 451 AVLQKVANHVALLQSASTSKQQETLIKRICDQVFSRFPDFVQ------KSKDAAFETLSD 504
Query: 519 ----GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +
Sbjct: 505 PKYSGKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEE 563
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
R K+V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R G
Sbjct: 564 RLKIVKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIG 622
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDL 691
Q + V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +L
Sbjct: 623 QCRDVKVLRLVSLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGEL 679
Query: 692 FTFHDDVR 699
F H+ R
Sbjct: 680 FGIHNLFR 687
>gi|345492169|ref|XP_001602814.2| PREDICTED: DNA excision repair protein ERCC-6-like [Nasonia
vitripennis]
Length = 1154
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 277/574 (48%), Gaps = 70/574 (12%)
Query: 159 WQPEEPQNDGGNLVPITVDPLLV-RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDM 217
++ EP + NL + PL V + L +Q+ V++M+E S L G +L D+M
Sbjct: 292 YKKNEPLHKVDNLFKV---PLRVWKHLYKYQKVAVKWMWELHSRNL------GGLLGDEM 342
Query: 218 GLGKTLQSIALLYTLLCQGF--DGKPM--VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
GLGKT+Q IA L L C DG + ++IV P +L+ W W L
Sbjct: 343 GLGKTVQVIAFLAGLDCSDLLSDGGRFRGLGPSLIVCPATLLEQWVKHFHDWWPT---LR 399
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSS---KFSCSESCDLLICDEAHR 330
A+ ID +L+ SY +H KF +I DE H+
Sbjct: 400 AVILHQSGTFQGDIDELLHTLKDGGILVTSYTGVLIHKEPLLKFKWH----YVILDEGHK 455
Query: 331 LKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
++N ++ N L+E +++ +F PG LG F +
Sbjct: 456 IRNPDAKVSKVVKAFLTPHRILLTGSPMQNSLKELWSLFDFILPGKLGTLPAFMEHCAGP 515
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTP 429
I G A++ ++ ++ ++ L + ++LRRT + +H LP K +V+ C LT
Sbjct: 516 ITRGGYANASQLQEATALQVATMLKDAITPYMLRRTKFDVQHHVSLPDKNEQVLFCSLTE 575
Query: 430 LQSELYNHFIHSKNVKRAISEETK----QSKILAYITALKKLCNHPKLIYDTIKSGNPGT 485
Q +LY ++ S +V I E + ++++L +TAL+K+CNHP L T N
Sbjct: 576 EQRQLYIQYLRSDDVSFVIHERREGGRYRARLLVALTALRKICNHPDLFLYT--DNNQEE 633
Query: 486 TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNY 545
+ + + EM + G W + +GKM V+ LL + ++ R++L +
Sbjct: 634 SDEDAALEVDENEM--EKFGHW--------KRAGKMTVVRSLL-KIWKKQGHRVLLFTQS 682
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLN 604
Q + + L ++ +Y YLR+DGTT + +RQ V FN DPS FVFLL+++ GG G+N
Sbjct: 683 RQMMHILEGLLQKEKYNYLRMDGTTPMGQRQLTVTKFNQDPSY--FVFLLTTRVGGLGVN 740
Query: 605 LIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
L G NR++++DPDWNPA D QA R WR GQ+K V +YR ++ GTIEEK+Y RQ+
Sbjct: 741 LTGANRVIIYDPDWNPATDAQARERAWRIGQEKSVTVYRLITAGTIEEKMYHRQVF---- 796
Query: 665 QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV 698
K++ + Q T DL +LF ++ +
Sbjct: 797 -KILLSNKVLEDPRQRRLFRTTDLTELFNLNEPI 829
>gi|417406219|gb|JAA49776.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1240
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 276/569 (48%), Gaps = 88/569 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 109 SENGDSIPYTIN----RYLRDYQREGAQFLYGHFIQG-------RGCILGDDMGLGKTVQ 157
Query: 225 SIALLYTLL-----------------CQGFDGKP---MVKKA-IIVTPTSLVSNWEAEIK 263
I+ L +L + +P + KK +IV P S++ NW E+
Sbjct: 158 VISFLAAVLHKKGTREDIENNMPEFLLRSLKKEPPSSIAKKMFLIVAPLSVLYNWRDELD 217
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
W G ++ L + +D + + ++ + +YET R+ + + E +
Sbjct: 218 TW--GYFRVTILHGNKKDTELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSAV 269
Query: 324 ICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
I DEAHR+KN + +N+++E + ++++ PG+LG +F
Sbjct: 270 IVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHF 329
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++ + + G+ TAT+ E G + L+ ++ + LRRT L+ N LP K +V
Sbjct: 330 KKQFSDPVEHGQRHTATKRELATGRKAMQMLARRMTGWFLRRTKTLIKNQLPKKEDRMVY 389
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYI 461
C LT Q +Y + +++V + ET ++ +Y+
Sbjct: 390 CSLTDFQKAVYQTVLETEDVTLILQSSEPCTCGSGRKRRNCCYKTNSHGETVKTLYFSYL 449
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSG 519
T L+K+ NH L+ S T C + F P+ F +S + + SG
Sbjct: 450 TVLQKVANHVSLLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYSG 508
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T R K+V
Sbjct: 509 KMKVLQQLLSHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEDRIKIV 567
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN +++ V L+S+ AGG GLN G N +VLFDP WNPAND QA R +R GQ + V
Sbjct: 568 KEFNG-TQDVNVCLVSTMAGGLGLNFTGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDV 626
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
++R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 627 KVFRLISLGTVEEIMYLRQVYKQQLHCVV 655
>gi|327281442|ref|XP_003225457.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1441
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 270/546 (49%), Gaps = 63/546 (11%)
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
V L + L +Q+ GV++++E L+ + G IL D+MGLGKT+Q IA L L
Sbjct: 478 VPGFLFKKLFKYQQTGVRWLWE-----LHCQQV-GGILGDEMGLGKTIQIIAFLAGLSYS 531
Query: 236 GFDGKPM------VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDS 289
+ + ++IV PT+++ W E W +A+ T + +
Sbjct: 532 KIRTRGSNYRFTGLGPSLIVCPTTVMHQWVKEFHNWWPPF--RVAVLHETGSYIKKKVKL 589
Query: 290 FTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---------- 339
+ + +LI SY R+ + +I DE H+++N
Sbjct: 590 IREIAACNGILITSYSYVRLLQESIH-RYNWHYVILDEGHKIRNPNAAVTLACKQFSTPH 648
Query: 340 ---------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIE 390
+N+L+E +++ +F PG LG F + I G A+ + K +
Sbjct: 649 RIILSGSPIQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYCNASPVQVKTAYK 708
Query: 391 RSSELSAKVNQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
+ L +N ++LRR N +S LP K +V+ C+LT Q E+Y FI SK V + +
Sbjct: 709 CACILRDTINPYLLRRMKANVKMSLSLPDKNEQVLFCRLTDEQHEVYKRFIDSKEVYQIL 768
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
+ E + I + +TAL+K+CNHP + SG P ++ P E +
Sbjct: 769 NGEMQ---IFSGLTALRKICNHPDIF-----SGGP------KILKGVPDEELNEEDHF-- 812
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
G W + SGKM V+ LL + + R++L + Q L + ++R Y Y+++DG
Sbjct: 813 ---GFW-KRSGKMIVVESLL-KIWYKQGHRVLLFTQSRQMLHIIEAFLKQRSYSYVKMDG 867
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
TT+++ RQ L++ FN+ + + F+FLL+++ GG G+NL G +R++++DPDWNP+ D QA
Sbjct: 868 TTTVASRQPLISRFNEDT-SIFIFLLTTRVGGLGVNLTGADRVIIYDPDWNPSTDTQARE 926
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R WR GQ K V +YR L+ GTIEEK+Y RQ+ K+ L I ++ Q F + DL
Sbjct: 927 RAWRIGQTKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKD-----PKQRRFFKSNDL 981
Query: 689 RDLFTF 694
+LF+
Sbjct: 982 YELFSL 987
>gi|349581455|dbj|GAA26613.1| K7_Isw2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1120
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNII----LEARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ I+ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVIQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|6324879|ref|NP_014948.1| Isw2p [Saccharomyces cerevisiae S288c]
gi|74676479|sp|Q08773.1|ISW2_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW2;
AltName: Full=Imitation switch protein 2
gi|1420671|emb|CAA99622.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285815176|tpg|DAA11069.1| TPA: Isw2p [Saccharomyces cerevisiae S288c]
gi|392296632|gb|EIW07734.1| Isw2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1120
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNII----LEARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ I+ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVIQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|198420785|ref|XP_002121862.1| PREDICTED: similar to DNA excision repair protein ERCC-6
(ATP-dependent helicase ERCC6) (Cockayne syndrome
protein CSB) [Ciona intestinalis]
Length = 1155
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 267/543 (49%), Gaps = 73/543 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTL---------LC 234
L +Q+ GV++++E L+ + G +L D+MGLGKT+Q I+ L L
Sbjct: 9 LYKYQQTGVKWLWE-----LHTQHV-GGVLGDEMGLGKTVQIISFLAGLHNSKIRDRDAS 62
Query: 235 QGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC 294
+DG + +I+ P +++ W E W+ + +A+ S+ S D +
Sbjct: 63 YSYDG---LGPVLIIAPATVMQQWLREFHTWLP--LVRVAILHSSGSHRGSKNDLINNMV 117
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------------- 339
S VLI SYE R+ S ++ +I DE H+++N Q
Sbjct: 118 LSRGVLITSYERARL-SIDMLMTKGWHYVILDEGHKIRNPQAAVTHAVKRFPTPHRIILS 176
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+N L+E +++ +F PG LG F + I+ G A+E + + + + L
Sbjct: 177 GSPIQNHLQELWSLFDFIYPGKLGTLPVFMEQFSVPIVQGGYANASEVQVETAYKCACVL 236
Query: 396 SAKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
++ ++LRR + +H LPPK +V+ C LT Q ++Y ++ S V + +
Sbjct: 237 RDTISPYLLRRMKVDVQSHIKLPPKSDQVLFCSLTDEQVDVYKEYLDSDIVHSIL---CR 293
Query: 454 QSKILAYITALKKLCNHPKLIYDTIK-SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
++KI + L+K+CNHP L K T G+ D RF G
Sbjct: 294 RAKIFVGLIQLRKICNHPDLFTGGHKLMVGEATPGYGDSRRF-----------------G 336
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
W SGKM V+ LL + ++ +++L + + L + + R Y YL + G TS+
Sbjct: 337 YW-RRSGKMVVVESLL-RIWKKQGKKVLLFTQSRKMLGILEDFVKSRSYCYLTMHGQTSV 394
Query: 573 SKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
RQ LV FN DPS FVF+L+++ GG G+NLIG +R+V++DPDWNP+ D QA R W
Sbjct: 395 QARQPLVKKFNEDPSI--FVFILTTRVGGLGVNLIGADRVVIYDPDWNPSTDTQAQERSW 452
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
R GQ K+V IYR +++GTIEEK+Y RQ+ K+ + + ++ Q F + D+ +L
Sbjct: 453 RIGQTKQVTIYRLVTSGTIEEKIYHRQIFKQFMTNRVLKD-----PKQRRFFKSNDVHEL 507
Query: 692 FTF 694
FT
Sbjct: 508 FTL 510
>gi|327290729|ref|XP_003230074.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 282/581 (48%), Gaps = 83/581 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F++ L G ILADDMGLGKT+Q IA L + G +V
Sbjct: 67 LFEHQKEGVAFLYN-----LYHKKRQGGILADDMGLGKTIQIIAFLSGMFDAG-----LV 116
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI-ALCESTRDDVVSGIDSFTDPCSSLQVLI 301
+ +++ P +LV+NW E WV G RV++ + R+ + I T VL+
Sbjct: 117 RSVLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQNLEQIQRRTG------VLL 170
Query: 302 VSYETFRMHSSKFSCSES----CDLLICDEAHRLKNDQTLTNR----------------- 340
SY+ + + S + + +I DEAH++K+ T +
Sbjct: 171 TSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVYGIPAVNRILLTGTP 230
Query: 341 --NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
N+L E +A+ +F G +LG A F+ YE+ I+ RE AT EK LG++ S L A
Sbjct: 231 VQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLGEKALGLKISQNLMA 290
Query: 398 KVNQFILRRTN----------------------ALLSNHLPPKIIEVVCCKLTPLQSELY 435
+ + LRR+ AL LP K +V L P+Q ++Y
Sbjct: 291 IIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDFIVWVYLAPMQEDIY 350
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
+F+ ++K + T +S LA +T LKKLC+HP+L+ + G E
Sbjct: 351 RNFLSLDHIKELLM--TTRSP-LAELTVLKKLCDHPRLL----SAQACANLGLEVSEYSE 403
Query: 496 PPEM--FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
P + S D +E SGK+ L LL L++ +V S + LD+
Sbjct: 404 PTDQSTLSMTQDIKRVSDKLLIEESGKLVFLVALLEKLQEEGHQTLVF-SQSRKMLDIIE 462
Query: 554 QLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
+ +R + +R+DGT T +++R+K V F K+ VFLL+++ GG GL L R+V
Sbjct: 463 HILTKRSFRLMRVDGTVTCLAEREKRVRQFQ-MDKSYSVFLLTTQVGGVGLTLTSATRVV 521
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
+FDP WNPA D QA R +R GQK+ V IYR ++ GT+EEK+Y+RQ+ K+ L IQQ
Sbjct: 522 IFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSL---IQQST 578
Query: 673 TDSSATQGNFLSTEDLRDLFTFHDDVRSEIH---ENMHCTR 710
D + + ++LR+LFT D S +++H T+
Sbjct: 579 GDKK-NPYRYFTQQELRELFTLEDTTSSATQLQLQSLHATQ 618
>gi|327286256|ref|XP_003227847.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1310
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 265/575 (46%), Gaps = 104/575 (18%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
HQREGV F++ GL G G ILADDMGLGKT+Q IA L G + +K
Sbjct: 88 HQREGVAFLY----GLYRD-GKKGGILADDMGLGKTIQIIAFL-----SGMFDEEHIKSV 137
Query: 247 IIVTPTSLVSNWEAEIKKWVGG-RVQLI-ALCESTRDDVVSGIDSFTDPCSSLQVLIVSY 304
+++ PT+L+SNW E W G RV++ C + R+ + I +L+ +Y
Sbjct: 138 LLIVPTTLISNWTKEFASWTPGLRVKVFHGTCIAERNRNLEWIQRRHG------ILLTTY 191
Query: 305 ETFR---MHSSKFSCSESC-DLLICDEAHRLKNDQTLTNR-------------------N 341
+ + F E D I DEAH++K T + N
Sbjct: 192 QMVLNNWQQLASFGNKEFVWDYAILDEAHKIKTPSAKTTKSVHAIPSKNRILLTGTPVQN 251
Query: 342 DLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
+L+E +A+ +F G +LG FR YE I R AT EK LG++ S L + +
Sbjct: 252 NLKELWALFDFACQGSLLGTMKTFRMEYENPITRARAKDATPGEKALGLKISENLMSIIK 311
Query: 401 QFILRRTN----------------ALLSN-------HLPPKIIEVVCCKLTPLQSELYNH 437
+ LRR+ AL S LP K +V L P+Q E+Y
Sbjct: 312 PYFLRRSKDELKKTVNLEQKSNLPALQSKDAAPPMPSLPRKNDFIVWVYLAPIQEEIYRK 371
Query: 438 FIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI---------------YDTIKSGN 482
FI ++K + T +S LA + LKKLC+HP+L+ YD N
Sbjct: 372 FISLDHIKELLM--TTRSP-LAELNILKKLCDHPRLLSARACSQLGLETSSCYDLDGDEN 428
Query: 483 PGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLV 542
I D +E SGK+ L LL L Q R ++
Sbjct: 429 EANDVLHQNIEHL--------------SDQVLIEESGKLLFLVALLDRL-QEEGHRTLVF 473
Query: 543 SNYTQTLDLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGC 601
S + LD+ ++ RR+ +R+DGT T +++R+K + F S+ VFLL+++ GG
Sbjct: 474 SQSRKMLDIIERILTRRRFKLMRIDGTVTHLTEREKRIGMFQKNSEYS-VFLLTTQVGGV 532
Query: 602 GLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSK 661
GL L R+V+FDP WNPA D QA R +R GQK V IYR ++ GT+EEK+Y+RQ+ K
Sbjct: 533 GLTLTAATRVVIFDPSWNPATDAQAVDRAYRIGQKANVVIYRLITCGTVEEKIYRRQVFK 592
Query: 662 EGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ L + + T + S ++LR+LFT D
Sbjct: 593 DSLIR----QSTGEKKNPYRYFSNQELRELFTLED 623
>gi|151945386|gb|EDN63629.1| ATPase component of a two subunit chromatin remodeling complex
[Saccharomyces cerevisiae YJM789]
Length = 1120
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNII----LEARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ ++ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVVQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|207340908|gb|EDZ69113.1| YOR304Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1121
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNII----LEARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ ++ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVVQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|403308077|ref|XP_003944505.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saimiri
boliviensis boliviensis]
Length = 1253
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 275/567 (48%), Gaps = 83/567 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F++ L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 96 LFEHQKEGVAFLYS-----LYRDGRKGGILADDMGLGKTVQIIAFLSGM----FDAS-LV 145
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDP----CSSLQV 299
+++ PT+L++ W E KW G +++ ++D+ ++ ++ Q+
Sbjct: 146 NHVLLIMPTNLINTWLKEFVKWTPG-MRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQM 204
Query: 300 LIVSYETFRMHSSKFSCSESC-DLLICDEAHRLKNDQT----------LTNR-------- 340
LI +++ S F E D +I DEAH++K T +NR
Sbjct: 205 LINNWQQL----SSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNRLLLTGTPI 260
Query: 341 -NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
N+L E +++ +F G +LG F+ YE I RE AT EK LG + S L A
Sbjct: 261 QNNLRELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATAGEKALGFKISENLMAI 320
Query: 399 VNQFILRRTNALLSNHLP-PKI--------IEVVC--------------CKLTPLQSELY 435
+ + LRRT + P + ++ +C +L PLQ E+Y
Sbjct: 321 IKPYFLRRTKEEVQKKTSNPDVKLNENNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 380
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
F+ ++K + E QS LA + LKKLC+HP+L+ + G + F
Sbjct: 381 RKFVSLDHIKELLME--TQSP-LAELGVLKKLCDHPRLL----STRACGLLNLR-TVTFS 432
Query: 496 PPEMFSGRSGSWTG-----GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
+ G G D +E SGKM L LL LR +V S Q L+
Sbjct: 433 ARDENEGEDSPDMGHIDQISDDTLMEESGKMIFLMGLLKRLRDEGHQTLVF-SQSRQILN 491
Query: 551 LFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGN 609
+ +L + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG GL L
Sbjct: 492 IIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQ-NKDYSVFLLTTQVGGVGLTLTAAT 550
Query: 610 RLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ 669
R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L +
Sbjct: 551 RVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIR--- 607
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ T + S ++LR+LFT D
Sbjct: 608 -QTTGEKKNPFRYFSKQELRELFTIED 633
>gi|259149779|emb|CAY86583.1| Isw2p [Saccharomyces cerevisiae EC1118]
Length = 1121
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNII----LEARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ ++ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVVQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|190407604|gb|EDV10871.1| ATPase component of a two subunit chromatin remodeling complex
[Saccharomyces cerevisiae RM11-1a]
Length = 1121
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIIL----EARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ ++ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVVQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|395548628|ref|XP_003775239.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1438
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 287/573 (50%), Gaps = 80/573 (13%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
+Q+EGV F++ L G ILADDMGLGKT+Q IA L + FD + +VK
Sbjct: 136 YQKEGVAFLYS-----LYKENRKGGILADDMGLGKTIQIIAFLSAM----FDAE-LVKYV 185
Query: 247 IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTD----PCSSLQVLIV 302
+++ PTSL+S W E KW G +++ S++ + ++ ++ Q++I
Sbjct: 186 LLIMPTSLISTWIKEFGKWTPG-MRVATFHGSSKSERTRNLNRIQRKNGVAVTTYQMVIN 244
Query: 303 SYETF-RMHSSKFSCSESCDLLICDEAHR----------------LKNDQTLTN---RND 342
+++ ++ ++F D LI DEAH+ +KN LT +N+
Sbjct: 245 NWQQLSQLDGNEFVW----DYLILDEAHKIKSSSTKSSIAARAIPVKNRLLLTGTPVQNN 300
Query: 343 LEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
L E +++ +F G +LG + F+ YE I RE AT EK LG++ S L +
Sbjct: 301 LYELWSLFDFACQGSLLGTSKTFKMEYENPITRAREKDATSGEKALGLKISENLMTLIKP 360
Query: 402 FILRRT--------NALLSNHLPPKII--EVVC--------------CKLTPLQSELYNH 437
+ LRRT N + LP K + +VVC L PLQ E+Y
Sbjct: 361 YFLRRTKDDVQKKNNTKAQSSLPEKKLGDDVVCEIPSLSRKNELIIWVYLVPLQEEIYRK 420
Query: 438 FIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP 497
F+ ++K+ + E LA +T LKKLC+HP+L+ S G ++ I F
Sbjct: 421 FVSLNHIKQLLMETRSP---LAELTILKKLCDHPRLLSARACS----LLGLKEGIFFNKG 473
Query: 498 EMFSGRSGSWTGG--DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
+ G+S + ++ SGK+ L LL L+ +V S + LD+ L
Sbjct: 474 KNQEGQSEIQIDQVPPESLMKESGKVIFLMALLKRLQDEGHQTLVF-SQSRRLLDIIEHL 532
Query: 556 CRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
++ + LR+DGT T + +RQ+ ++ F S++ VFLL+S+ GG GL L +R+V+F
Sbjct: 533 LKKENFKTLRIDGTVTQLPERQRRIDLFQQ-SQDASVFLLTSQVGGVGLTLTAASRVVIF 591
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L + +Q +
Sbjct: 592 DPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDQKN 651
Query: 675 SSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
+ S ++LR+LFT D S +H
Sbjct: 652 PV----RYFSKQELRELFTIGDFRSSPTQVQLH 680
>gi|365762966|gb|EHN04498.1| Isw2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1121
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIIL----EARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ ++ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVVQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|256272525|gb|EEU07504.1| Isw2p [Saccharomyces cerevisiae JAY291]
Length = 1121
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 272/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKQIEG-PF 236
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V ++ L + TR D+V I + VL
Sbjct: 237 ----LIIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNII----LEARFDVL 287
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 288 ITSYEMVIREKNALK-RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 346
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P I GD+ F ++E + +E+++++ ++ +L + +N
Sbjct: 347 NLHELWALLNFLLPDIFGDSELFDEWFEQN--------NSEQDQEIVVQ---QLHSVLNP 395
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 456 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 490
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS +R + +
Sbjct: 491 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAI 549
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ +FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 550 DEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ GN S +DL D+ F
Sbjct: 610 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGN--SKDDLLDMIQF 663
>gi|426257224|ref|XP_004022232.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ovis aries]
Length = 1242
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 277/570 (48%), Gaps = 88/570 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L +Q+EGV F++ L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 96 LYEYQKEGVAFLYS-----LYRDGRKGGILADDMGLGKTVQIIAFLSGM----FDAS-LV 145
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ---VL 300
+++ PTSL+S W E KW G +++ ++D+ + C Q V+
Sbjct: 146 NHVLLIMPTSLISIWLREFVKWTPG-MRVKTFHGPSKDERTRNL------CRIQQRNGVI 198
Query: 301 IVSYETFRMHSSKFSCSES----CDLLICDEAHRLKNDQT----------LTNR------ 340
I +Y+ + + S D +I DEAH++K T +NR
Sbjct: 199 ITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKTSSTKSAICARAIPASNRILLTGT 258
Query: 341 ---NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
N+L+E +++ +F G +LG F+ YE I RE AT +EK LG + S L
Sbjct: 259 PIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPQEKALGFKISENLM 318
Query: 397 AKVNQFILRRTN------------ALLSNHLP--------PKIIE----VVCCKLTPLQS 432
A + + LRRT A LS P P + ++ +L PLQ
Sbjct: 319 AIIKPYFLRRTKEEVQKKKSSNPEAQLSEKSPDVGAICEMPSLSRKNDLIIWIRLVPLQE 378
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
E+Y F+ ++K + E LA + LKKLC+HP+L+ + ++ G
Sbjct: 379 EIYRKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLL--SARACGLLNLG---AA 430
Query: 493 RFFPPEMFSGRSGSWTG-----GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
+F + G S D +E SGKM L LL LR +V S +
Sbjct: 431 KFSVQDEIEGEDSSDVDHIDQISDDTLMEESGKMVFLMDLLKKLRDEGHQTLVF-SQSRR 489
Query: 548 TLDLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
L++ +L + R + LR+DGT T + +R+K ++ F +K+ VFLL+++ GG GL L
Sbjct: 490 ILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQ-NKDYSVFLLTTQVGGVGLTLT 548
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
+R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L +
Sbjct: 549 AASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIR 608
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ T + S ++LR+LFT D
Sbjct: 609 ----QTTGDKKNPFRYFSKQELRELFTIED 634
>gi|350589423|ref|XP_003357745.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Sus scrofa]
Length = 713
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 281/569 (49%), Gaps = 88/569 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 121 SEDGASIPYTIN----RYLRDYQREGAQFLYGHFIQG-------RGCILGDDMGLGKTVQ 169
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA---------IIVTPTSLVSNWEAEIK 263
I+ L +L + F + M K+A +IV P S++ NW E+
Sbjct: 170 VISFLAAVLGKKGTREDIENNMPEFLLRSMKKEAPSSAAKKLFLIVAPLSVLYNWRDELD 229
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
W G ++ L + +D+ + + ++ + +YET R+ + + E +
Sbjct: 230 TW--GYFRVTILHGNKKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSAV 281
Query: 324 ICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYF 364
I DEAHR+KN + LT +N+++E + ++++ PG+LG +F
Sbjct: 282 IVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSEIHF 341
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++++ + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 342 KKHFSDPVEHGQRHTATKRELATGRKAMQRLAIKMSGWFLRRTKILIKDQLPKKEDRMVY 401
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYI 461
C LT Q +Y + +++V + E+ ++ +Y+
Sbjct: 402 CSLTDFQKAVYQTVLETEDVSLILQSSEPCPCSSGQKRRNCCYKTNSHGESVKTLYFSYL 461
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSG 519
L+K+ NH L+ S T C + F P+ F +S + + SG
Sbjct: 462 AVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYSG 520
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 521 KMKVLQQLLNHCR-KNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERIKIV 579
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ + V
Sbjct: 580 KEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDV 638
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+ R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 639 KVLRLISLGTVEEIMYLRQLYKQQLHCVV 667
>gi|326429518|gb|EGD75088.1| Rad54b protein [Salpingoeca sp. ATCC 50818]
Length = 1070
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 189/339 (55%), Gaps = 30/339 (8%)
Query: 164 PQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTL 223
P +VP+ VDP L LRPHQR GV+F++ V G + G GCIL D+MGLGKTL
Sbjct: 295 PAGAKHQVVPVVVDPHLGVHLRPHQRVGVEFLWHSVVGKPHVEG-QGCILGDEMGLGKTL 353
Query: 224 QSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV 283
Q I L++T L Q DGKP+ ++ ++V P SLV NWE E +KW+G + + ++ +
Sbjct: 354 QCITLIWTALKQNHDGKPLARRVMVVCPGSLVRNWEQEFRKWLGRERIKVFVVKADKP-- 411
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
+ F S VL++SYE + + S + D+++CDEAHRLKN T
Sbjct: 412 ---VREFA-AASVFSVLLLSYEMLLRNIADVS-KLNLDIVVCDEAHRLKNTSAKTTMAMM 466
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+NDL+EFFA+V+F NPGILG A FRR YE I+ R+PTAT E
Sbjct: 467 GLRARRRIALTGTPIQNDLQEFFAIVDFCNPGILGTQATFRRVYERPILESRQPTATPAE 526
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+KLG R++EL+ ++ F LRRT + ++LPPK V+ C+ + Q +LY + S V
Sbjct: 527 RKLGDARATELTRMISSFCLRRTKEINLSYLPPKSDYVLFCRPSQTQLQLYRALLRSTAV 586
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
K + L ITALK LCN P ++ + G P
Sbjct: 587 KSCLQGRLSAGSHLVIITALKTLCNSPTIL---CRKGQP 622
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 135/194 (69%), Gaps = 4/194 (2%)
Query: 515 VELSGKMHVLARLLGHLRQR-TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V L GKM +L+ +L H R ++R+++VSN T+ L LC + YP+LRL G T
Sbjct: 699 VSLCGKMQLLSHMLQHWRAHPANERVLIVSNSTKVLSRVQALCEQCAYPFLRLQGNTPTH 758
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
KR +LVN FN +++FVFL+SSKAGG GLN++G +RL+L+D DWNPAND QA ARVWRD
Sbjct: 759 KRLELVNRFNSRVRDDFVFLMSSKAGGVGLNIVGASRLILYDTDWNPANDLQAMARVWRD 818
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRD 690
GQK+ V++YRFL+TGTIEEK+YQRQ+ K+GL + Q + + Q S E+L+D
Sbjct: 819 GQKRHVYVYRFLTTGTIEEKIYQRQVHKQGLSGSVVDKQGSKKTAGTKQVAGFSMEELKD 878
Query: 691 LFTFHDDVRSEIHE 704
+F+ +D +S+ ++
Sbjct: 879 IFSLREDTKSDTND 892
>gi|410988871|ref|XP_004000700.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Felis catus]
Length = 1241
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 177/571 (30%), Positives = 273/571 (47%), Gaps = 91/571 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F++ L G G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 96 LFEHQKEGVAFLYS-----LYRDGRKGGILADDMGLGKTVQIIAFLSGM----FDAT-LV 145
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+++ PT+L+S W E KW G +++ ++++ ++ V+I +
Sbjct: 146 NHVLLIMPTNLISTWIKEFVKWTPG-MRVKTFHGPSKNERTRNLNRIQQRNG---VIITT 201
Query: 304 YETFRMHSSKFSCSES----CDLLICDEAHRLKNDQTLT----------NR--------- 340
Y+ + + S D +I DEAH++K+ T + NR
Sbjct: 202 YQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKSSSTKSAICARAIPTRNRILLTGTPIQ 261
Query: 341 NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
N+L+E +++ +F G +LG F+ YE I RE AT+ EK LG + S L +
Sbjct: 262 NNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATQGEKALGFKISENLMTII 321
Query: 400 NQFILRRTNALLSNHLP--PKI--------IEVVC--------------CKLTPLQSELY 435
+ LRRT + P++ ++ +C +L PLQ E+Y
Sbjct: 322 KPYFLRRTKEEVQKKKSSNPEVRLREKNLDVDAICEMPSLSRKNDFIIWIRLAPLQEEIY 381
Query: 436 NHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI---------YDTIKSGNPGTT 486
F+ ++K + E LA + LKKLC+HP+L+ ++K PG
Sbjct: 382 RKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSARACLLLNLGSVKFSVPGEN 438
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
ED + + D + SGKM L LL LR +V S
Sbjct: 439 EGEDSSDVDQIDQIT---------DDTLMAESGKMLFLIELLERLRDEGHQTLVF-SQSR 488
Query: 547 QTLDLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNL 605
Q L++ L + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG GL L
Sbjct: 489 QILNIIECLLKNRHFKILRIDGTITHLVEREKRINLFQQ-NKDYSVFLLTTQIGGVGLTL 547
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L
Sbjct: 548 TAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLI 607
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ QT + + ++LR+LFT D
Sbjct: 608 R-----QTTGDKNPFRYFTKQELRELFTIED 633
>gi|291383503|ref|XP_002708309.1| PREDICTED: RAD26L hypothetical protein-like [Oryctolagus cuniculus]
Length = 1644
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 276/569 (48%), Gaps = 95/569 (16%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G+ +P T++ R+LR +QREG QF++ G GCIL DDMGLGKT+Q I+
Sbjct: 101 GDSIPYTIN----RYLRDYQREGTQFLY----GHYRQG--RGCILGDDMGLGKTVQVISF 150
Query: 229 LYTLLCQGFDGK--------------------PMVKKA-IIVTPTSLVSNWEAEIKKWVG 267
L +L + + M KK +IV P S++ NW+ E+ W
Sbjct: 151 LAAVLHKKGTREDIENNMPEFLLRSMKKELPSSMTKKMFLIVAPLSVLYNWKDELDTW-- 208
Query: 268 GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
G ++ L + +D+ + I ++ + +YET R+ + + E +I DE
Sbjct: 209 GYFRVTVLHGNRKDNELMRIKQ-----RKCEIALTTYETLRLCLDELNSLE-WSAIIVDE 262
Query: 328 AHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYY 368
AHR+KN + +N+++E + ++++ PG+LG +F++ +
Sbjct: 263 AHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQF 322
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
+ G+ TAT+ E G + L+ ++ LRRT L+ + LP K +V C LT
Sbjct: 323 SDPVEHGQRHTATKRELATGRKAMRRLAGRMAGSFLRRTKTLIKDQLPKKEDRMVYCSLT 382
Query: 429 PLQSELYNHFIHSKNV-----------------KRAISEETK------QSKILAYITALK 465
Q +Y + +++V +R+ +T ++ L+Y+T L+
Sbjct: 383 EFQKAVYQTVLETEDVTLILQSSKPCTCNSGRKRRSCCYKTNSRGDEVKTLCLSYLTVLQ 442
Query: 466 KLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE------LSG 519
K+ NH L+ T+ E I+ ++FS A E SG
Sbjct: 443 KVANHVALLQAA------STSKQETLIKRICDQVFSKFPDFVQKSKDAAFETLSDPKYSG 496
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +LL H R R D+++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 497 KMKVLQQLLNHCR-RNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIV 555
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN +++ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R GQ + V
Sbjct: 556 KEFNS-TQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQCRDV 614
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+ R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 615 KVLRLISLGTVEEIMYLRQLYKQQLHCVV 643
>gi|395519787|ref|XP_003764023.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1197
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 184/590 (31%), Positives = 287/590 (48%), Gaps = 108/590 (18%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F++ L G ILADDMGLGKT+Q +A L + FD + +V
Sbjct: 100 LFEHQKEGVAFLYS-----LYKERRKGGILADDMGLGKTVQILAFLSAM----FDAE-LV 149
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTD----PCSSLQV 299
+ +++ PTSL+S W E KW G +++ S++++ + ++ ++ Q+
Sbjct: 150 RFVLLIMPTSLISTWTKEFDKWTPG-MRVATFHGSSKNERIRNLNRIQRNNGVAITTYQM 208
Query: 300 LIVSYETF-RMHSSKFSCSESCDLLICDEAHR----------------LKNDQTLTN--- 339
L+ +++ ++ +F D LI DEAH+ +KN LT
Sbjct: 209 LVNNWQQLSQLDGKEFVW----DYLILDEAHKIKSSSTKSSIAARAIPVKNRILLTGTPI 264
Query: 340 RNDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAK 398
+N+L E +++ +F G +LG + F+ YE I RE AT EK LG++ S L A
Sbjct: 265 QNNLYELWSLFDFACQGSLLGTSKTFKIEYENPITRAREKDATPGEKVLGLKISENLMAL 324
Query: 399 VNQFILRRT---------NALLSNHLPPKIIE----------------VVCCKLTPLQSE 433
+ + LRRT N L N LP K ++ ++ L PLQ E
Sbjct: 325 IKPYFLRRTKEDIQKKSTNKPLRN-LPEKNLDDDIIYEIPFLSRKNELIIWVYLVPLQEE 383
Query: 434 LYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT------IKSGNPGTTG 487
+Y F+ ++K+ + E LA +T LKKLC+HP+L+ +K GN
Sbjct: 384 IYRKFLSLNHIKQLLMETHSP---LAELTVLKKLCDHPRLLSARACSLLGLKEGN----- 435
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDG---------AWVELSGKMHVLARLLGHLRQRTDDR 538
FSG S + ++ SGK+ L LL L+
Sbjct: 436 ------------FSGEDESQMAHSNIQIDQVPHESLMQESGKVIFLMALLKRLQDEGHQT 483
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSK 597
+V S + LD+ L ++ + LR+DGT T +S+RQ+ ++ F S++ VFLL+S+
Sbjct: 484 LVF-SQSRKLLDIIEHLLKKENFKTLRIDGTVTHLSERQRRIDLFQQ-SQDVSVFLLTSQ 541
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
GG GL L R+++FDP WNPA D QA RV+R GQK+ V +YR +S GT+EEK+Y+R
Sbjct: 542 VGGLGLTLTSATRVIIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLISCGTVEEKIYRR 601
Query: 658 QMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMH 707
Q+ K+ L + + T + S ++LR+LFT D S +H
Sbjct: 602 QVFKDSLIR----QTTGDQKNPARYFSKQELRELFTIGDFRSSATQLQLH 647
>gi|307191137|gb|EFN74835.1| DNA excision repair protein ERCC-6 [Camponotus floridanus]
Length = 983
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 170/559 (30%), Positives = 276/559 (49%), Gaps = 70/559 (12%)
Query: 186 PHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ---GFDGKPM 242
P + VQ+++E S L G ++ D+MGLGKT+Q IA L L C +G+
Sbjct: 197 PSDNDSVQWLWELHSRKL------GGLMGDEMGLGKTVQVIAFLAGLDCSELLSHNGRYR 250
Query: 243 -VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
+ I+V P +L+ W W RV ++ D S I+S + +L
Sbjct: 251 GLGPTIVVCPATLMEQWVKHFHDWWPFFRVVVLHHSGGYNGDPESLIESL----QTGGIL 306
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
+ SY H S+ +I DE H+++N Q +R N
Sbjct: 307 VTSYNGILKHKDLLVSSQ-WHYVILDEGHKIRNPQAKVSRAVKQFSTPHRLLLSGSPMQN 365
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
L+E +++ +F PG LG F + T I G AT ++ ++ ++ L +
Sbjct: 366 SLKELWSLFDFILPGKLGTLPVFLEHCATPITRGGYANATSLQEATALQVATMLKDTITP 425
Query: 402 FILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK------ 453
++LRRT + +HL P K +V+ C LT Q +LY ++ S++V + E+
Sbjct: 426 YMLRRTKNDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYLCSEDVTFILHEKNNHDTGRY 485
Query: 454 QSKILAYITALKKLCNHPKL-IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
+++ L ++AL+K+CNHP L +Y + T E+ + F G
Sbjct: 486 RARFLIALSALRKICNHPDLFLYTREFDSDEDITLSEEQLEKF----------------G 529
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
W + +GKM+V+ LL + + R++L + Q + + L + Y YLR+DGTT++
Sbjct: 530 YW-KRAGKMNVVRSLLK-IWHKQQHRVLLFTQGRQMMHILESLLQREGYTYLRMDGTTAM 587
Query: 573 SKRQKLVNHFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
S+RQ+ ++ FN+ PS FVFLL+++ GG G+NLIG +R++++DPDWNPA D QA R W
Sbjct: 588 SQRQQTIHTFNNRPSY--FVFLLTTRVGGLGVNLIGADRVIIYDPDWNPATDAQARERAW 645
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
R GQ K+V +YR ++ GTIEEK+Y RQ+ K L + + Q T DL +L
Sbjct: 646 RIGQNKQVTVYRLITAGTIEEKMYHRQIFKLLLSNKVLDD-----PRQRRLFKTTDLVEL 700
Query: 692 FTFHDDVRSEIHENMHCTR 710
F ++ + + E+ H R
Sbjct: 701 FNLNEPIDGKSSESDHLFR 719
>gi|297836766|ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332105|gb|EFH62524.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1181
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 291/648 (44%), Gaps = 123/648 (18%)
Query: 165 QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKT 222
Q +GG +P + R L +QR GVQ+++E C G I+ D+MGLGKT
Sbjct: 368 QLEGGLNIP----ECIFRKLFEYQRVGVQWLWELHCQRA--------GGIIGDEMGLGKT 415
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRD- 281
+Q ++ L +L M K +II+ P +L+ W E +KW + L +S +D
Sbjct: 416 IQVLSFLGSLHFS-----KMYKPSIIICPVTLLRQWRREAQKWYPD-FHVEILHDSAQDS 469
Query: 282 --------------DVVSGIDS-------FTDPCSSL---------QVLIVSYETFRMHS 311
D +DS T SL +LI +YE R+
Sbjct: 470 GHGKGQGKANESDYDSECSVDSDHEQKSKNTKKWDSLINRVLNSESGLLITTYEQLRLQG 529
Query: 312 SKFSCSESCDLLICDEAHRLKN---DQTLTNR----------------NDLEEFFAMVNF 352
K E + DE HR++N D TL + N L E +++ +F
Sbjct: 530 EKLLNIE-WGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDF 588
Query: 353 TNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLS 412
PG LG F + I G A+ + + L + ++LRR A ++
Sbjct: 589 VFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVN 648
Query: 413 NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPK 472
HL K V+ C LT Q Y F+ S V++ I + + S L I ++K+CNHP
Sbjct: 649 AHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEQ-ILDGNRNS--LYGIDVMRKICNHPD 705
Query: 473 LIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR 532
L+ NP D E SGKM V+A +L +
Sbjct: 706 LLEREHSHQNP---------------------------DYGNPERSGKMKVVAEVLKVWK 738
Query: 533 QRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVF 592
Q+ R++L S Q LD+ Y Y R+DG T + +R L++ FN+ S + FVF
Sbjct: 739 QQ-GHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNN-SDDVFVF 796
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
+L++K GG G NL G NR+++FDPDWNP+ND QA R WR GQKK V +YR ++ GTIEE
Sbjct: 797 VLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEE 856
Query: 653 KVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD-----------VRS 700
KVY RQ+ K L K+++ Q Q F D++DLF DD + S
Sbjct: 857 KVYHRQIYKHFLTNKILKNPQ------QRRFFKARDMKDLFILKDDGDSNASTETSNIFS 910
Query: 701 EIHENMHCTRCQNYDDGAESIGEGDETNSAN-KNDQSDQEVTDIGGFA 747
++ E ++ Q+ D ES + N+A ++Q+D E TD G A
Sbjct: 911 QLAEEINIVGAQS-DKKPESATQLALHNTAEGSSEQTDVETTDKTGEA 957
>gi|440906008|gb|ELR56322.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Bos grunniens mutus]
Length = 685
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 278/568 (48%), Gaps = 87/568 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 94 SENGDSIPYTIN----RYLRDYQREGAQFLYGHFIQG-------RGCILGDDMGLGKTVQ 142
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F + M K +IV P S++ NW+ E+
Sbjct: 143 VISFLAAVLGKKGTREDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDT 202
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L + +D + + ++ + +YET R+ + + E +I
Sbjct: 203 W--GYFRVTILHGNKKDSELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSAII 254
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG +F+
Sbjct: 255 VDEAHRIKNPKARVTEIMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFK 314
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V C
Sbjct: 315 KQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYC 374
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V + ET ++ +Y+
Sbjct: 375 SLTDFQKAVYQTVLETEDVSLILQSSEPCTCNSGQKRRNCCYKTNSQGETVKTLYFSYLA 434
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSGK 520
L+K+ NH L+ T S T C + F P+ F +S + + SGK
Sbjct: 435 VLQKVANHVALLQTTSTSRQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYSGK 493
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 494 MKVLQQLLNHCR-KNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERIKIVK 552
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ + V
Sbjct: 553 EFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVK 611
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+ R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 612 VLRLISLGTVEEIMYLRQVYKQQLHCVV 639
>gi|308800854|ref|XP_003075208.1| Cockayne syndrome group B (ISS) [Ostreococcus tauri]
gi|116061762|emb|CAL52480.1| Cockayne syndrome group B (ISS), partial [Ostreococcus tauri]
Length = 1134
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 259/562 (46%), Gaps = 85/562 (15%)
Query: 162 EEPQNDGGNLVPI-TVDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMG 218
EE + GG +P T + LL PHQ+ +++++E C G I+ D+MG
Sbjct: 321 EEVEFAGGLSIPGDTYERLL-----PHQKTCLKWLWELHCQRA--------GGIIGDEMG 367
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI----A 274
LGKT+Q + L L G M +IIV P +++ W E++ W I A
Sbjct: 368 LGKTVQVSSFLCALHHSG-----MYSPSIIVCPATMLRQWRRELRIWAPKLKATILHDSA 422
Query: 275 LCESTRDDVVSGIDSFTDPC--SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLK 332
+ S+ + D C +L+ +YE R+ K CS + DE H+++
Sbjct: 423 MSSSSGKTKARERERVFDMCVRDGDGILVTTYEQMRLFRDKI-CSVRWGYAVLDEGHKIR 481
Query: 333 N---DQTLTNR----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N D T+ ++ N L E +++ +F PG LG F+ + I
Sbjct: 482 NPDADITIVSKQLQTVHRIVMSGAPIQNRLSELWSLFDFVFPGKLGTLPVFQAQFAVPIQ 541
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
G A+ ++ + L + ++LRR + LP K +V+ C +T Q E
Sbjct: 542 IGGYTNASNQQVTTAYRCAVTLKDLIAPYLLRRMKCDVDVKLPEKTEQVLFCPMTQEQRE 601
Query: 434 LYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR 493
Y ++ S+ V+ + + L I L+K+ NHP L+ + + + D R
Sbjct: 602 AYRAYLASREVEEILD---GSREALGGIDVLRKIVNHPDLLE---RRTQAASEEYGDASR 655
Query: 494 FFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFA 553
SGK+ V ++L R++ R ++ S Q LD+
Sbjct: 656 ------------------------SGKLQVTLKVLSLWREQ-GHRCLVFSQTQQMLDILE 690
Query: 554 QLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVL 613
Y Y R+DG TSI R L++ FND K FVFLL++K GG G+NL G NR++L
Sbjct: 691 AAVARAGYSYRRMDGNTSIGMRMSLIDEFNDNDKGIFVFLLTTKVGGLGVNLTGANRVML 750
Query: 614 FDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQ 672
FDPDWNP+ D QA R WR GQ+K V +YR ++ GTIEEKVY RQ+ KE L KV++ +
Sbjct: 751 FDPDWNPSTDAQARERAWRIGQQKEVTVYRLITAGTIEEKVYHRQIYKEFLTSKVLKDPK 810
Query: 673 TDSSATQGNFLSTEDLRDLFTF 694
Q F D+ DLFTF
Sbjct: 811 ------QRRFFKARDMADLFTF 826
>gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6, partial [Ascaris suum]
Length = 1156
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 260/555 (46%), Gaps = 91/555 (16%)
Query: 184 LRPHQREGVQFMFE----CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL-----C 234
L +Q+ GV+++ E CV G ILAD+MGLGKT+Q I L L
Sbjct: 265 LFKYQKTGVRWLSELHEQCVGG----------ILADEMGLGKTIQVICFLRALAFSQAET 314
Query: 235 QGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC 294
+GF G + +++ PT+L+ W E W LC R V+ F P
Sbjct: 315 RGF-GFRGLGPVLLICPTTLMHQWLKEFHNW-------FPLC---RIAVLHSSGCFRGPQ 363
Query: 295 SSLQ-----------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--- 340
S L L+ SY TF K + + +I DE H+++N R
Sbjct: 364 SHLLSKFSTYRKDGCTLLTSYSTF-TKKRKALANANWHYVILDEGHKIRNPGAQMTRAVK 422
Query: 341 ----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
N L+E +++++F PG LG F + I G A+ +
Sbjct: 423 EVRTPHRLILTGSPLQNSLKELWSLMDFVYPGRLGALQTFTEKFAIPITQGGYANASAIQ 482
Query: 385 KKLGIERSSELSAKVNQFILRRT--NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK 442
+ + + L +N +ILRR + ++ LP K +V+ C +TP Q Y +I S+
Sbjct: 483 VRTAYKCACVLRDAINPYILRRMKKDVEMTVQLPSKTEQVLFCNITPCQRTFYKDYISSR 542
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
R ++ + IT L+KLCNHP L+ +G P + EM
Sbjct: 543 ECARILA--GGMDAFVGLIT-LRKLCNHPDLV-----TGGPNKHNEYNVT--LDEEM--- 589
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
D SGKM VL LL L + + +++L S Q L L + + Y
Sbjct: 590 --------DFGAASRSGKMIVLKALL-KLWKDQNQKVLLFSQSRQMLTLLEKFVIKEGYE 640
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YLR+DG+T I RQ LV FN +++ F+FLL++K GG G+NL G NR+V+FDPDWNP+
Sbjct: 641 YLRMDGSTPIGSRQPLVEKFN-TNEDIFLFLLTTKVGGLGVNLTGANRVVIFDPDWNPST 699
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQ++ V +YR L++GTIEEK+YQRQ+ K+ L + + Q F
Sbjct: 700 DVQARERAWRIGQERAVTVYRLLTSGTIEEKIYQRQIFKQFLANRVLVD-----PKQRRF 754
Query: 683 LSTEDLRDLFTFHDD 697
T DL +LFT D+
Sbjct: 755 FKTNDLHELFTLGDE 769
>gi|387595687|gb|EIJ93310.1| transcription activator [Nematocida parisii ERTm1]
Length = 861
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 278/586 (47%), Gaps = 117/586 (19%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LR +Q EG+ ++ +N CILAD+MGLGKTLQ+I+LL L + P
Sbjct: 70 LRHYQIEGLNWLINMYEKKIN------CILADEMGLGKTLQTISLLGYLYTTKKNKLP-- 121
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL--I 301
+++ P S + NW+ E KK++ G +I C +R D+ LQ L I
Sbjct: 122 --NLLIVPKSTLQNWKNEFKKFMPGIKTIIFHC--SRKDI-------KLKAKELQELDYI 170
Query: 302 VSYETFRMHSSKFSCSESCD--LLICDEAHRLKNDQTLTNR------------------- 340
T+ M + S ++ D ++ DEAHR+KN+QT+ ++
Sbjct: 171 ACITTYEMCLAGKSQLQTVDWQYIVIDEAHRIKNEQTVLSKVVRIIPCTHRLLLTGTPLQ 230
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N++ E +A++NF P + D F + E+S G E +L +
Sbjct: 231 NNIHELWALLNFLAPEVFSDGEGFDAWVESS------------SNDTGNETVDKLRNLLG 278
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY 460
FILRR A + L PK I + LT +Q + Y I K+ + ++E +K +++
Sbjct: 279 LFILRREKADVEKSLLPKKIINLYSPLTDMQRKWYK-MILEKDAENVVNEGSK-VQLMNI 336
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
+ L+K CNHP L +D + G P TTG +E SGK
Sbjct: 337 VCQLRKCCNHPYL-FDGAEPGPPYTTG------------------------EHIIENSGK 371
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
+ +L +LL HL+Q+ R+++ S T+ LD+ C R++ Y R+DG+TS R + +
Sbjct: 372 LLMLDKLLVHLKQK-GSRVLIFSQMTRMLDILEDYCNYRQHEYCRIDGSTSTEDRCEAIE 430
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN P+ F+FLLS++AGG G+NL + ++++D DWNP D QA R R GQKK+VF
Sbjct: 431 EFNKPNSEIFIFLLSTRAGGLGINLATADVVIVYDNDWNPQMDLQAQDRAHRIGQKKQVF 490
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ--TDSSATQGNFLSTEDLRDLFTFHDDV 698
++ FLS TIEEK+ +R M K L ++I Q Q D++ +Q L
Sbjct: 491 VFNFLSENTIEEKILERAMKKLKLDEIIVQNQKKKDNAISQNELL--------------- 535
Query: 699 RSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIG 744
G + G D N+ NK DQS +E+ IG
Sbjct: 536 ------------------GILASGVDDVFNTENKIDQSIEEIIRIG 563
>gi|15224228|ref|NP_179466.1| DNA excision repair protein E [Arabidopsis thaliana]
gi|4185142|gb|AAD08945.1| putative SNF2/RAD54 family DNA repair and recombination protein
[Arabidopsis thaliana]
gi|330251711|gb|AEC06805.1| DNA excision repair protein E [Arabidopsis thaliana]
Length = 1187
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 289/647 (44%), Gaps = 121/647 (18%)
Query: 165 QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKT 222
Q +GG +P + R L +QR GVQ+++E C G I+ D+MGLGKT
Sbjct: 370 QLEGGLNIP----ECIFRKLFDYQRVGVQWLWELHCQRA--------GGIIGDEMGLGKT 417
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
+Q ++ L +L M K +II+ P +L+ W E +KW + L +S +D
Sbjct: 418 IQVLSFLGSLHFS-----KMYKPSIIICPVTLLRQWRREAQKWYPD-FHVEILHDSAQDS 471
Query: 283 ---------------VVSGIDSFTDPCS-------SL---------QVLIVSYETFRMHS 311
S +DS +P S SL +LI +YE R+
Sbjct: 472 GHGKGQGKASESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQG 531
Query: 312 SKFSCSESCDLLICDEAHRLKN---DQTLTNR----------------NDLEEFFAMVNF 352
K E + DE HR++N D TL + N L E +++ +F
Sbjct: 532 EKLLNIE-WGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDF 590
Query: 353 TNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLS 412
PG LG F + I G A+ + + L + ++LRR A ++
Sbjct: 591 VFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVN 650
Query: 413 NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPK 472
HL K V+ C LT Q Y F+ S V++ I + + S L I ++K+CNHP
Sbjct: 651 AHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEQ-IFDGNRNS--LYGIDVMRKICNHPD 707
Query: 473 LIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLR 532
L+ NP D E SGKM V+A +L +
Sbjct: 708 LLEREHSHQNP---------------------------DYGNPERSGKMKVVAEVLKVWK 740
Query: 533 QRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVF 592
Q+ R++L S Q LD+ Y Y R+DG T + +R L++ FN+ S++ FVF
Sbjct: 741 QQ-GHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNN-SEDMFVF 798
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
+L++K GG G NL G NR+++FDPDWNP+ND QA R WR GQKK V +YR ++ GTIEE
Sbjct: 799 VLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEE 858
Query: 653 KVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD-----------VRS 700
KVY RQ+ K L K+++ Q Q F D++DLF DD + S
Sbjct: 859 KVYHRQIYKHFLTNKILKNPQ------QRRFFKARDMKDLFILKDDGDSNASTETSNIFS 912
Query: 701 EIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFA 747
++ E ++ Q+ + ++Q+D E+TD G A
Sbjct: 913 QLAEEINIVGVQSDKKPESDTQLALHKTAEGSSEQTDVEMTDKTGEA 959
>gi|110289185|gb|ABB47753.2| SNF2 domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 1476
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 290/613 (47%), Gaps = 101/613 (16%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFE----CVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
P+ + + L+PHQ G++FM+E V + + GCILA +MGLGKT Q I
Sbjct: 703 APVRIPSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVIT 762
Query: 228 LLYTLL-CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR---VQLIALCESTRDDV 283
LYT++ C ++ A+IVTP +++ NW+ E KW +++ L + R ++
Sbjct: 763 FLYTVMRCIQLG----LRTALIVTPVNVLHNWKKEFIKWCPAESKPLRVYMLEDVPRANI 818
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHS-----------SKFSCSESC--DLLICDEAHR 330
+ + VL++ Y +FR S ++ + + C D+L+CDEAH
Sbjct: 819 QYLLKKWRIKGG---VLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHI 875
Query: 331 LKN---------DQTLTNR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
+KN Q T R N+L E++ MV+F G LG + FR ++
Sbjct: 876 IKNRRADTTQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNP 935
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I G+ +T ++ K+ +RS L ++ F+ R ++ N LP K + VV KL+ LQ
Sbjct: 936 IENGQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQLQ 995
Query: 432 SELYNHFIHSKNVKRAISEET--KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE 489
+LY F+ + + E ++S A L + NHP L+ + GN E
Sbjct: 996 RKLYRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVE 1055
Query: 490 ----------DCIRFFPP---------EMFSGRSGSWTGGDGAWVE------------LS 518
D I + P + S +S + W E S
Sbjct: 1056 SFLMDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAYKEADYS 1115
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL----FAQL---CRERRY-----PYLRL 566
GKM +L +L + D +V S TLDL ++L +E +Y + R+
Sbjct: 1116 GKMVLLLDILSSCSELGDKALVF-SQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRI 1174
Query: 567 DGTTSISKRQKLVNHFNDPSKNEF-VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T S+RQ LV FNDP L+S++AG G+NL NR++L D WNP +D Q
Sbjct: 1175 DGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQ 1234
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLS 684
A RVWR GQ K V+ YR ++ T+EEK+Y+RQ++KEGL +V+ ++Q + +S
Sbjct: 1235 AIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRT------IS 1288
Query: 685 TEDLRDLFTFHDD 697
E++ LF F D+
Sbjct: 1289 KEEMLHLFEFGDE 1301
>gi|387594113|gb|EIJ89137.1| transcription activator [Nematocida parisii ERTm3]
Length = 638
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 278/586 (47%), Gaps = 117/586 (19%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LR +Q EG+ ++ +N CILAD+MGLGKTLQ+I+LL L + P
Sbjct: 70 LRHYQIEGLNWLINMYEKKIN------CILADEMGLGKTLQTISLLGYLYTTKKNKLP-- 121
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL--I 301
+++ P S + NW+ E KK++ G +I C +R D+ LQ L I
Sbjct: 122 --NLLIVPKSTLQNWKNEFKKFMPGIKTIIFHC--SRKDI-------KLKAKELQELDYI 170
Query: 302 VSYETFRMHSSKFSCSESCD--LLICDEAHRLKNDQTLTNR------------------- 340
T+ M + S ++ D ++ DEAHR+KN+QT+ ++
Sbjct: 171 ACITTYEMCLAGKSQLQTVDWQYIVIDEAHRIKNEQTVLSKVVRIIPCTHRLLLTGTPLQ 230
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N++ E +A++NF P + D F + E+S G E +L +
Sbjct: 231 NNIHELWALLNFLAPEVFSDGEGFDAWVESS------------SNDTGNETVDKLRNLLG 278
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY 460
FILRR A + L PK I + LT +Q + Y I K+ + ++E +K +++
Sbjct: 279 LFILRREKADVEKSLLPKKIINLYSPLTDMQRKWYK-MILEKDAENVVNEGSK-VQLMNI 336
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
+ L+K CNHP L +D + G P TTG +E SGK
Sbjct: 337 VCQLRKCCNHPYL-FDGAEPGPPYTTG------------------------EHIIENSGK 371
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
+ +L +LL HL+Q+ R+++ S T+ LD+ C R++ Y R+DG+TS R + +
Sbjct: 372 LLMLDKLLVHLKQK-GSRVLIFSQMTRMLDILEDYCNYRQHEYCRIDGSTSTEDRCEAIE 430
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN P+ F+FLLS++AGG G+NL + ++++D DWNP D QA R R GQKK+VF
Sbjct: 431 EFNKPNSEIFIFLLSTRAGGLGINLATADVVIVYDNDWNPQMDLQAQDRAHRIGQKKQVF 490
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ--TDSSATQGNFLSTEDLRDLFTFHDDV 698
++ FLS TIEEK+ +R M K L ++I Q Q D++ +Q L
Sbjct: 491 VFNFLSENTIEEKILERAMKKLKLDEIIVQNQKKKDNAISQNELL--------------- 535
Query: 699 RSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIG 744
G + G D N+ NK DQS +E+ IG
Sbjct: 536 ------------------GILASGVDDVFNTENKIDQSIEEIIRIG 563
>gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum]
Length = 1136
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 267/540 (49%), Gaps = 76/540 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI----ALLYTLLCQGFDG 239
L +Q+ G+++++E L+ G G IL D+MGLGKT+Q I AL ++ L G
Sbjct: 289 LYKYQKIGIKWLWE-----LHQQG-SGGILGDEMGLGKTIQMIVFFGALYWSRLKDKITG 342
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV 299
+ ++IV P +L+ W E KW ++++ L E+ G D + SS +
Sbjct: 343 IRGLGPSLIVCPATLMHQWVEEFHKWCPP-IRVVVLHETGVYKGKPG-DLIKEVWSSKGI 400
Query: 300 LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN------------------R 340
LI +Y H + + +I DE H+++N D +T +
Sbjct: 401 LITTYNGLLQHINNL-LKNNWHYVILDEGHKIRNPDSKITVAAKQLKSSHRIIISGSPIQ 459
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N L+E +++ +F P LG F + + I G ATE + + ++ L ++
Sbjct: 460 NHLKELWSLFDFIFPSKLGTLPAFIKSFAVPITHGGYANATELQITTAYKCATILKDTIS 519
Query: 401 QFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS-KI 457
++LRR A + +H LP K +V+ C+LT Q +Y ++ ++ ISE S K+
Sbjct: 520 PYLLRRMKADIQSHISLPDKNEQVLFCRLTEEQKTMYRGYLEHSDI---ISEIMNGSCKV 576
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
I+ L+ +CNHP + ++ TG G W +
Sbjct: 577 FVGISRLRTICNHPDIFQTNLE----------------------------TGAFGYWKK- 607
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGKM V+ LL + ++ R++L + + L++F + E+ Y YL+L+G TSI RQ
Sbjct: 608 SGKMIVVEALL-KMWKKQGHRVLLFTQSVKMLNIFQKFIIEQNYSYLKLEGATSIGSRQP 666
Query: 578 LVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
++N FN DPS FV +L++K GG G+NLIG +R+++FDPDWNPA D QA R WR GQ
Sbjct: 667 IINKFNKDPSI--FVMILTTKVGGLGVNLIGADRVIIFDPDWNPATDLQARERAWRIGQT 724
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
V IYR L+ GTIEEK+Y RQ+ K+ L + + Q F + L +LFT D
Sbjct: 725 NSVTIYRLLTAGTIEEKIYHRQIFKQFLSNKVLVD-----PKQRRFFKSNYLYELFTLQD 779
>gi|426219863|ref|XP_004004137.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Ovis aries]
Length = 712
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 277/568 (48%), Gaps = 87/568 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 121 SENGDSIPYTIN----RYLRDYQREGAQFLYGHFIQG-------RGCILGDDMGLGKTVQ 169
Query: 225 SIALLYTLLCQG------------FDGKPMVKKA--------IIVTPTSLVSNWEAEIKK 264
I+ L +L + F + M K +IV P S++ NW+ E+
Sbjct: 170 VISFLAAVLGKKGTREDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDT 229
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L + +D + + ++ + +YET R+ + + E +I
Sbjct: 230 W--GYFRVTILHGNKKDSELIRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSAII 281
Query: 325 CDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
DEAHR+KN + +N+++E + ++++ PG+LG +F+
Sbjct: 282 VDEAHRIKNPKARVTEIMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFK 341
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V C
Sbjct: 342 KQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYC 401
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V + ET ++ +Y+
Sbjct: 402 SLTDFQKAVYQTVLETEDVSLILQSSEPCTCSSGQRRRNCCYKTNSQGETVKTLYFSYLA 461
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSGK 520
L+K+ NH L+ S T C + F P+ F +S + + SGK
Sbjct: 462 VLQKVANHVALLQTASTSKQQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKYSGK 520
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 521 MKVLQQLLNHCR-KNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERIKIVK 579
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ + V
Sbjct: 580 EFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVK 638
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+ R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 639 VLRLISLGTVEEIMYLRQVYKQQLHCVV 666
>gi|115482344|ref|NP_001064765.1| Os10g0457700 [Oryza sativa Japonica Group]
gi|113639374|dbj|BAF26679.1| Os10g0457700, partial [Oryza sativa Japonica Group]
Length = 1319
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 290/613 (47%), Gaps = 101/613 (16%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFE----CVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
P+ + + L+PHQ G++FM+E V + + GCILA +MGLGKT Q I
Sbjct: 703 APVRIPSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVIT 762
Query: 228 LLYTLL-CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGR---VQLIALCESTRDDV 283
LYT++ C ++ A+IVTP +++ NW+ E KW +++ L + R ++
Sbjct: 763 FLYTVMRCIQLG----LRTALIVTPVNVLHNWKKEFIKWCPAESKPLRVYMLEDVPRANI 818
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHS-----------SKFSCSESC--DLLICDEAHR 330
+ + VL++ Y +FR S ++ + + C D+L+CDEAH
Sbjct: 819 QYLLKKWRIKGG---VLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHI 875
Query: 331 LKN---------DQTLTNR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETS 371
+KN Q T R N+L E++ MV+F G LG + FR ++
Sbjct: 876 IKNRRADTTQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNP 935
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I G+ +T ++ K+ +RS L ++ F+ R ++ N LP K + VV KL+ LQ
Sbjct: 936 IENGQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQLQ 995
Query: 432 SELYNHFIHSKNVKRAISEET--KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE 489
+LY F+ + + E ++S A L + NHP L+ + GN E
Sbjct: 996 RKLYRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVE 1055
Query: 490 ----------DCIRFFPP---------EMFSGRSGSWTGGDGAWVE------------LS 518
D I + P + S +S + W E S
Sbjct: 1056 SFLMDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAYKEADYS 1115
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL----FAQL---CRERRY-----PYLRL 566
GKM +L +L + D +V S TLDL ++L +E +Y + R+
Sbjct: 1116 GKMVLLLDILSSCSELGDKALVF-SQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRI 1174
Query: 567 DGTTSISKRQKLVNHFNDPSKNEF-VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG+T S+RQ LV FNDP L+S++AG G+NL NR++L D WNP +D Q
Sbjct: 1175 DGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQ 1234
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLS 684
A RVWR GQ K V+ YR ++ T+EEK+Y+RQ++KEGL +V+ ++Q + +S
Sbjct: 1235 AIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRT------IS 1288
Query: 685 TEDLRDLFTFHDD 697
E++ LF F D+
Sbjct: 1289 KEEMLHLFEFGDE 1301
>gi|348565314|ref|XP_003468448.1| PREDICTED: hypothetical protein LOC100728605 [Cavia porcellus]
Length = 1526
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 174/602 (28%), Positives = 290/602 (48%), Gaps = 98/602 (16%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+++P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 95 SEDGDVIPYTIN----RYLRDYQREGAQFLYRHYIQG-------RGCILGDDMGLGKTVQ 143
Query: 225 SIALLYTLL-----------------CQGFDGKP----MVKKAIIVTPTSLVSNWEAEIK 263
I+ L +L + +P + K +IV P S++ NW+ E+
Sbjct: 144 VISFLAAVLHKKGTREDIENNMPEFLLRRVKKEPTSSTIKKMFLIVAPLSVLYNWKDELD 203
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
W RV ++ + +D+ + + ++ + +YET R+ + + E +
Sbjct: 204 TWGYFRVTIVH--GNKKDNELIRVRQ-----RKCEIALTTYETLRLCLDELNSVE-WSAV 255
Query: 324 ICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
I DEAHR+KN + +N+++E + ++++ PG+LG +F
Sbjct: 256 IVDEAHRIKNPKARVTEAMKALKCDIRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHF 315
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
++ + + G++ TAT+ E G L+A+++ +LRRT AL+S LP K +V
Sbjct: 316 QKQFSDPVEHGQKHTATKRELATGRRAMRRLAARMSGCLLRRTKALISGQLPKKEDRMVY 375
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYI 461
C LT Q +Y + +++V + E ++ +Y+
Sbjct: 376 CSLTDFQKAVYQTVLETEDVTLILQSSKPCTCNSGRKRRNCCYKTNSHGEAVKALYFSYL 435
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS- 518
L+K+ NH L+ S + T C + F P+ D A+ LS
Sbjct: 436 AVLQKVANHVALLQAASTSRHQETLIKRICDQVFSRFPDFVQ------KSKDAAFETLSD 489
Query: 519 ----GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
GKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +
Sbjct: 490 PKYSGKMKVLQQLLNHFR-KNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEE 548
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
R ++V FN +++ + L+S+ AGG GLN +G N ++LFDP WNPAND QA R +R G
Sbjct: 549 RLRIVKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIG 607
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
Q + V ++R +S GT+EE +Y RQ+ K+ L V+ + + S E +LF
Sbjct: 608 QCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGT 667
Query: 695 HD 696
H+
Sbjct: 668 HN 669
>gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1286
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 268/556 (48%), Gaps = 79/556 (14%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q I+ L L
Sbjct: 381 VPGFLWKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQVISFLAGLS 432
Query: 234 CQGFDGK------PMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---ALCESTRDDV 283
+ + IIV P +++ W E W RV ++ S + +
Sbjct: 433 YSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVREFHAWWPPFRVAVLHETGSFSSNKKKL 492
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
+ I S C +LI SY R+ + +I DE H+++N
Sbjct: 493 IPEIVS----CHG--ILITSYSAVRIMQDTLQRWD-WHYIILDEGHKIRNPNAGVTLACK 545
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+N+L+E +++ +F PG LG F + I G A+ +
Sbjct: 546 QFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ 605
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHSK 442
+ + + L +N ++LRR A + +L P K +V+ CKLT Q ++Y F+ SK
Sbjct: 606 VQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTEEQRQVYRSFLDSK 665
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
V + ++ + + + + AL+K+CNHP L SG P +R P + +
Sbjct: 666 EVYQILNRDMQ---VFPGLIALRKICNHPDLF-----SGGP------QFLRGVPEDQLAQ 711
Query: 503 --RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
R G W + SGK+ V+ LL L R R++L + Q L++ RE
Sbjct: 712 EDRFGFW--------KRSGKLIVVESLL-RLWFRQGQRVLLFTQSRQMLNILEVFVRENN 762
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y YL++DGTTSIS RQ L+ +N+ + F+FLL++K GG G+NL G NR++++DPDWNP
Sbjct: 763 YSYLKMDGTTSISSRQPLIARYNE-DNSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNP 821
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
+ D QA R WR GQ ++V IYR L+ GTIEEK+Y RQ+ K+ L + ++ Q
Sbjct: 822 STDTQARERAWRIGQTQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQR 876
Query: 681 NFLSTEDLRDLFTFHD 696
F + D+ +LFT D
Sbjct: 877 RFFKSNDIYELFTLSD 892
>gi|241074609|ref|XP_002408725.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492547|gb|EEC02188.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1216
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 273/556 (49%), Gaps = 68/556 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L +QREG+ +M+ GL G +L DDMGLGKT+Q IA L + FD ++
Sbjct: 18 LYAYQREGLLWMW----GLYLKK--RGGVLGDDMGLGKTVQVIAFLSGM----FDAD-LI 66
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
K +++ P SL+ NW+ E + W G +++ ST+ + + + VL+ S
Sbjct: 67 KSVLLIMPVSLIPNWKKEFQAWAPG-IRVFDYHSSTKKEKERSLARVQNRGG---VLLTS 122
Query: 304 YETFRMHSSKFSCSESCDL----LICDEAHRLKNDQTLTN------------------RN 341
Y + + S LI DE H++KN T +N
Sbjct: 123 YGMVQTSAEILSAQGGRKFVWCYLILDEGHKIKNPTKTTKAVYELPAKHRLVLTGTAIQN 182
Query: 342 DLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
+L E +A+ NF + G +LG A F+ YET I RE AT E+ LGIE S L K++
Sbjct: 183 NLRELWALYNFAHQGTLLGSLATFKSQYETHINRSREKDATAGERLLGIEISKNLMEKIS 242
Query: 401 QFILRRTNALL----------SNHLPPKII-------EVVCCKLTPLQSELYNHFIHSKN 443
F LRRT A + ++ L PK+ VV L+ +Q ++Y F+ S+
Sbjct: 243 PFFLRRTKAEVLENKENTEQETDSLRPKLCFTAKKNDLVVWVYLSEVQKKIYREFLESEE 302
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDT--IKSGNPGTTGFEDCIRFFPPEMFS 501
V + TK+S L +T LKK+C+HP+L+ ++ G + F E +
Sbjct: 303 VANILM--TKKSP-LVQLTILKKICDHPRLLSKRACVQMGMYDDMTQDQIEEFLDKEEGN 359
Query: 502 GRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRY 561
+ S D E SGKM + LL +L+ R + S + LD+ ++ R +
Sbjct: 360 SMTISDVPDDTLLAE-SGKMTFVLELLLNLKSE-GHRTLFFSQSRKILDIIQRILLNRGF 417
Query: 562 PYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
RLDGT T + +R +LV F S + +FLL+++ GG GL L +R+V++DP WNP
Sbjct: 418 RVTRLDGTITKLCERDRLVTQFQTRSLAD-IFLLTTQVGGVGLTLTSADRVVIYDPSWNP 476
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
A D QA R +R GQ K V +YR ++ T+EEK+Y+RQ+ K+ + K +Q D
Sbjct: 477 ATDAQAVDRAYRIGQSKNVVVYRLVTCSTVEEKIYRRQIFKDSIIKQTTGKQRDPV---- 532
Query: 681 NFLSTEDLRDLFTFHD 696
+ + ++LR+LFT D
Sbjct: 533 RYFTKQELRELFTLED 548
>gi|351705605|gb|EHB08524.1| DNA excision repair protein ERCC-6-like protein [Heterocephalus
glaber]
Length = 1181
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 275/578 (47%), Gaps = 105/578 (18%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ+EGV F++ L G ILADDMGLGKT+Q IA L + FD +V
Sbjct: 40 LFEHQKEGVAFLYS-----LYKDKRKGGILADDMGLGKTVQIIAFLSGM----FDAS-LV 89
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
A+++ PT+L+S W E KW G +++ ++D+ ++ V+I +
Sbjct: 90 NHALLIMPTNLISMWVKEFSKWTPG-MRVKTFHGPSKDERTRSLNRVQQRNG---VVITT 145
Query: 304 YETFRMHSSKFSCSESC-------DLLICDEAHRLKNDQT----------LTNR------ 340
Y+ + + S SC D +I DEAH++K+ T +NR
Sbjct: 146 YQMLINNWQQLS---SCNGQVFVWDYVILDEAHKIKSSSTKSAICARAIPASNRLLLTGT 202
Query: 341 ---NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
N+L+E +++ +F G +LG F+ YE I+ RE AT EK LG++ S L
Sbjct: 203 PIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGEKALGLKISENLM 262
Query: 397 AKVNQFILRRTNALLSNHLP--PKI--------IEVVC--------------CKLTPLQS 432
+ + LRRT + P++ ++ +C +L PLQ
Sbjct: 263 EIIKPYFLRRTKEEVQKTKSNIPEVRPTEKNSGVDAICEMPSLSRKNDLIIWIRLVPLQE 322
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTI-------------K 479
E+Y F+ ++K + E LA + LKKLC+HP+L+ + +
Sbjct: 323 EIYRKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSTRVCHLLHLGTAKISGQ 379
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
GN + D I D +E SGKM L LL LR +
Sbjct: 380 DGNEEDSSDVDAIAHVT--------------DDTLMEESGKMIFLIDLLKRLRDEGHQTL 425
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKA 598
V S Q L++ +L R + + LR+DGT T + +R+K +N F +K+ VFLL+++
Sbjct: 426 VF-SQSRQILNIIERLLRNKHFKILRIDGTVTHLLEREKRINLFQQ-NKDYSVFLLTTQV 483
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GG GL L R+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ
Sbjct: 484 GGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQ 543
Query: 659 MSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ K L + + T + + ++LR+LFT D
Sbjct: 544 VFKGSLIR----QTTGDKKNPYRYFNKQELRELFTVED 577
>gi|328783971|ref|XP_001120586.2| PREDICTED: DNA excision repair protein ERCC-6-like [Apis mellifera]
Length = 1134
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 275/568 (48%), Gaps = 68/568 (11%)
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
EP + NL I + + L +Q+ VQ+++E L G +L D+MGLGKT
Sbjct: 304 EPLHKIDNLFKIP--QFIWKKLYKYQKISVQWLWELHLRSL------GGLLGDEMGLGKT 355
Query: 223 LQSIALLYTLLCQGF--DGKPM--VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCES 278
+Q IA L L C DG + II+ P +L+ W +W ++++ L +S
Sbjct: 356 VQVIAFLAGLDCSELLSDGGRFRGLGPTIIICPATLMEQWVKHFHEW-WPILRIVVLHQS 414
Query: 279 TRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT 338
+ ++ S ++I SY H S +I DE H+++N Q
Sbjct: 415 GTYN--GNLEYLIHSLKSGGIIITSYSGMLKHKD-LLVSNQWHYVILDEGHKIRNPQAKV 471
Query: 339 NR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
++ N L+E +++ +F PG LG F + I G
Sbjct: 472 SKAVKEFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYAN 531
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNH 437
AT ++ ++ + L + ++LRRT + +H LP K +V+ C LT Q +LY
Sbjct: 532 ATPLQEATALQVAMMLRDAITPYMLRRTKNDVQHHVSLPEKNEQVLFCSLTEEQKKLYKK 591
Query: 438 FIHSKNVKRAISEETK------QSKILAYITALKKLCNHPKL-IYDTIKSGNPGTTGFED 490
++ S +V + E+ ++++L ++AL+K+CNHP L +Y T P + +
Sbjct: 592 YLRSTDVSFILHEKNNIENGKYRARLLIALSALRKICNHPDLYLYTT-----PIDSDEDI 646
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
I E F G W + SGKM ++ R L + ++ R++L + Q +
Sbjct: 647 DISDETLEKF-----------GYW-KHSGKM-IVVRSLLKIWKKQGHRVLLFTQGRQMMH 693
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ L + +Y YLR+DGTT +S RQ+ + FN S + F+FLL+++ GG G+NL G NR
Sbjct: 694 ILESLIQNEQYTYLRMDGTTPMSHRQETIRSFNKDS-SYFIFLLTTRVGGLGVNLTGANR 752
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
+V++DPDWNPA D QA R WR GQ K V IYR ++ GTIEEK+Y RQ+ K++
Sbjct: 753 VVIYDPDWNPATDAQARERAWRIGQNKNVTIYRLITAGTIEEKIYHRQIF-----KILLS 807
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHDDV 698
+ Q T DL +LF F++ +
Sbjct: 808 NKVLEDPRQRRLFKTNDLVELFNFNESI 835
>gi|410901417|ref|XP_003964192.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
rubripes]
Length = 1421
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 265/550 (48%), Gaps = 71/550 (12%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++++E C G IL D+MGLGKT+Q I+ L L
Sbjct: 495 VPGFLWKKLFKYQQTGVRWLWELHCQQA--------GGILGDEMGLGKTIQVISFLAGLS 546
Query: 234 CQGFDGK------PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
+ + IIV P +++ W E W +A+ T +
Sbjct: 547 YSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVKEFHTWWPPF--RVAVLHETGSFTSNKK 604
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------- 339
+ S +LI SY R+ + +I DE H+++N
Sbjct: 605 KLIPEIASCHGILITSYSAVRIMQDTLQGWD-WHYVILDEGHKIRNPNARVTTACKQFRT 663
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L+E +++ +F PG LG F + I G A+ + +
Sbjct: 664 PHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTA 723
Query: 389 IERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +N ++LRR A + +L P K +V+ CKLT Q ++Y F+ SK V +
Sbjct: 724 FKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTEEQRQVYQSFLDSKEVYQ 783
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS-- 504
++ + + + + + AL+K+CNHP L SG P +R P + +
Sbjct: 784 ILNGDMQ---VFSGLIALRKICNHPDLF-----SGGP------RLLRGIPEDQLTEEEHF 829
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
G W + SGK+ V+ LL L R R++L + Q L++ RE +Y Y+
Sbjct: 830 GFW--------KRSGKLIVVESLL-RLWFRQGQRVLLFTQSRQMLNILEVFVRENKYSYV 880
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
++DGTT IS RQ L+ +N+ K+ F+FLL++K GG G+NL G NR++++DPDWNP+ D
Sbjct: 881 KMDGTTPISSRQPLIACYNE-DKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDT 939
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA R WR GQK++V IYR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 940 QARERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFK 994
Query: 685 TEDLRDLFTF 694
+ D+ +LFT
Sbjct: 995 SNDIYELFTL 1004
>gi|390359838|ref|XP_780898.3| PREDICTED: DNA excision repair protein ERCC-6, partial
[Strongylocentrotus purpuratus]
Length = 1004
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 269/543 (49%), Gaps = 80/543 (14%)
Query: 187 HQREGVQFMFECVSGLLNAAGIH----GCILADDMGLGKTLQSIALLYTLLCQGFDGKPM 242
+Q+ GV++++E +H G IL +MGLGKT++ IA L L K
Sbjct: 52 YQKIGVKWLWE----------LHRQKAGGILGHEMGLGKTIEMIAFLAGLRTSALPSKGF 101
Query: 243 VKKAI----IVTPTSLVSNWEAEIKKWVGGRVQLIALCES-----TRDDVVSGIDSFTDP 293
+ + IV P +++ W E W +++ L ES R+ +V D
Sbjct: 102 SYRGLGPVLIVCPATVLHQWLKEFHTWYP-EIRVAILHESGSHSGKRESLVR------DM 154
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLT-------------- 338
SS VLI S+ T R+ + +I DE H+++N D +T
Sbjct: 155 ASSHGVLITSFSTVRLRQEML-LRYNWHYVILDEGHKIRNPDAEVTLACKQFRTPHRLIL 213
Query: 339 ----NRNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
+N+L E +++++F PG LG F + + I+ G A++ + + + +
Sbjct: 214 TGSPMQNNLRELWSLIDFVFPGKLGTLPVFMQQFSVPIVQGGYANASKVQVQTAYKCACI 273
Query: 395 LSAKVNQFILRRTNALLSN--HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET 452
L V+ ++LRR A + LP K +V+ C LT Q+++Y ++ SK + E
Sbjct: 274 LRDSVSPYLLRRLKADVKQALQLPSKNEQVLFCHLTEEQTQVYEEYLASKECNLILRGEY 333
Query: 453 KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
K + A + L+K+CNHP L+ SG P R F + S + G
Sbjct: 334 K---VFAGLITLRKICNHPDLV-----SGGP---------RIFSHQNLSDEDLTEEQRYG 376
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
+ + +GKM V+ LL L + + R++L S Q LD+ ++R Y Y+R+DGTT+I
Sbjct: 377 -YYKRAGKMIVVESLL-KLWKEQNHRVLLFSQSKQMLDIMEDFVKDR-YSYMRMDGTTTI 433
Query: 573 SKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVW 631
S RQ L+ FN DP F+FLL+++ GG G+NL G NR++++DPDWNP+ D QA R W
Sbjct: 434 SSRQPLITKFNSDP--RIFLFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERSW 491
Query: 632 RDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDL 691
R GQ K+V IYR L+ G+IEEK+Y RQ+ K L + ++ Q F + DL +L
Sbjct: 492 RIGQTKQVTIYRLLTAGSIEEKIYHRQIFKTFLTNRVLKD-----PRQRRFFKSNDLFEL 546
Query: 692 FTF 694
FT
Sbjct: 547 FTL 549
>gi|378756035|gb|EHY66060.1| transcription activator [Nematocida sp. 1 ERTm2]
Length = 862
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 261/527 (49%), Gaps = 86/527 (16%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LR +Q EG+ ++ +N CILAD+MGLGKTLQ+I+LL L + P
Sbjct: 70 LRHYQIEGLNWLINMYEKKIN------CILADEMGLGKTLQTISLLGYLYTAKKNKLP-- 121
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL--- 300
+++ P S + NW+ E KK++ G +I C +R D+ + LQ L
Sbjct: 122 --NLLIVPKSTLQNWKNEFKKFMPGVKTIIFHC--SRKDIRT-------KAKELQELDYI 170
Query: 301 --IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------ 340
I +YE ++ E ++ DEAHR+KN+QT+ ++
Sbjct: 171 ACITTYEMCLAGKTQLQSVE-WQYIVIDEAHRIKNEQTVLSKVVRIIPCAHRLLLTGTPL 229
Query: 341 -NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
N++ E +A++NF P + D F + E+S T + LG+
Sbjct: 230 QNNIHELWALLNFLAPEVFSDGEGFDAWVESSSNDVDNETVDKLRNLLGL---------- 279
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
FILRR A + L PK I + LT +Q Y I K+ + ++E +K +++
Sbjct: 280 --FILRREKADVEKSLLPKKIINLYTPLTEMQRTWYK-MILEKDAENLVNEGSKM-QLMN 335
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L +D + G P TTG ++ SG
Sbjct: 336 IVCQLRKCCNHPYL-FDGAEPGPPYTTG------------------------EHIIDNSG 370
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL HL+Q+ R+++ S T+ LD+ C R++ Y R+DG+TS R + +
Sbjct: 371 KMLILDKLLVHLKQK-GSRVLIFSQMTRMLDILEDYCNLRQHEYCRIDGSTSTEDRCEAI 429
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN P+ F+FLLS++AGG G+NL + ++++D DWNP D QA R R GQKK+V
Sbjct: 430 EEFNKPNSEMFIFLLSTRAGGLGINLATADVVIVYDNDWNPQMDLQAQDRAHRIGQKKQV 489
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ--TDSSATQGNFLS 684
F++ FL+ TIEEK+ +R M K L ++I Q Q D++ +Q LS
Sbjct: 490 FVFNFLTENTIEEKILERAMKKLKLDEIIVQNQKKKDNAISQNELLS 536
>gi|157822125|ref|NP_001100766.1| DNA excision repair protein ERCC-6 [Rattus norvegicus]
gi|149034143|gb|EDL88913.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 (predicted) [Rattus norvegicus]
Length = 1325
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 239/460 (51%), Gaps = 49/460 (10%)
Query: 247 IIVTPTSLVSNWEAEIKKWVGG-RVQLI---ALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
+IV PT+++ W E W RV ++ C ++ +V I C VLI
Sbjct: 489 LIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSCAHRKERLVRDIVH----CHG--VLIT 542
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----RNDLEEFFAMVNFTNPGIL 358
SY R+ S +I DE H+++N +N+L E +++ +FT PG L
Sbjct: 543 SYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQNNLRELWSLFDFTFPGKL 601
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLP 416
G F + I G A+ + K + + L +N ++LRR ++ +S LP
Sbjct: 602 GTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLP 661
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
K +V+ C+LT Q ++Y +FI SK V R ++ E ++I + + AL+K+CNHP L
Sbjct: 662 DKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGE---NQIFSGLVALRKICNHPDLF-- 716
Query: 477 TIKSGNPGTTGF--EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR 534
SG P T ED + E F G W + SGKM V+ LL + +
Sbjct: 717 ---SGGPKNTSALPEDGLE---EEQF-----------GYW-KRSGKMIVVESLL-KIWHK 757
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLL 594
R++L S Q L + R +Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL
Sbjct: 758 QGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDT-SIFVFLL 816
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
+++ GG G+NL G NR++++DPDWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+
Sbjct: 817 TTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 876
Query: 655 YQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
Y RQ+ K+ L + ++ Q F + DL +LFT
Sbjct: 877 YHRQIFKQFLTNRVLKD-----PKQRRFFKSNDLYELFTL 911
>gi|308512703|gb|ADO33005.1| cockayne syndrome protein [Biston betularia]
Length = 954
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 278/565 (49%), Gaps = 74/565 (13%)
Query: 160 QPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGL 219
+ E QN G LVP + L +F QR GV++++E + A G+ L D+MGL
Sbjct: 161 EKHELQN--GLLVPNFIWKQLYKF----QRTGVKWLWELHQ--VQAGGM----LGDEMGL 208
Query: 220 GKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCES 278
GKT+Q IA L L + +IIV P +++ W + W RV ++ S
Sbjct: 209 GKTIQIIAFLAGLSNTDMGSWGGLGPSIIVAPATVIYQWVSHFHFWCPHLRVAVLHHSGS 268
Query: 279 TRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLT 338
+ I D S +++++Y +S S +I DE H+++N T
Sbjct: 269 HAGNHNKLIRDLHD---SHGIVLITYAGIVKYSKDL-MSRKWHYIILDEGHKIRNPDTQV 324
Query: 339 NR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
++ N+L+E +++ +F PG+LG F ++ I G
Sbjct: 325 SKLVKKFETPHKLLITGSPMQNNLQELWSLFDFMRPGLLGTYNAFMEHFAQPITQGGYAN 384
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNH 437
ATE ++ +E + L + ++LRRT + + H LP K +V+ C LT Q +LY
Sbjct: 385 ATEFQEATAMEIAKALKIIITPYMLRRTKSEVQEHIKLPEKNEQVLFCALTREQRDLYMG 444
Query: 438 FIHSKNVKRAISEETK-----QSKILAYITALKKLCNHPKL-IYDTIKSGNPGTTGFEDC 491
++ S V+ + +E K ++++L ++ L+K+CNHP L +Y+ ++
Sbjct: 445 YLMSTTVRSILDKENKYGEPLRARMLVALSTLRKICNHPDLYLYEA-----------QED 493
Query: 492 IRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
+ E F G W + SGKM V+ LL + Q+ R ++ S L +
Sbjct: 494 LEAIDEEKF----GHW--------KRSGKMTVVNSLL-KIWQKQGHRALIFSQSRAMLCV 540
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
Q + + + YL++DG+ +S+RQ L+ FN+ ++ VFL +++ GG G+NL G +R+
Sbjct: 541 LEQYLQSQNFKYLKMDGSVLVSQRQSLIKTFNENAEY-LVFLSTTRVGGLGVNLTGADRV 599
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
+++DPDWNPA D QA R WR GQ++ V +YR L GTIEEK+YQRQ+ K L I +
Sbjct: 600 IVYDPDWNPATDDQAKERAWRIGQERTVTVYRLLCAGTIEEKIYQRQIFKHFLSNKILVD 659
Query: 672 QTDSSATQGNFLSTEDLRDLFTFHD 696
Q N L+T L+ LF + +
Sbjct: 660 -----PNQKNVLTTSTLQGLFNYEE 679
>gi|325179864|emb|CCA14266.1| hypothetical protein SORBIDRAFT_03g009030 [Albugo laibachii Nc14]
Length = 938
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 170/581 (29%), Positives = 275/581 (47%), Gaps = 93/581 (16%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
D G VP + L PHQR+ ++++ L+ G IL D+MGLGKT++ +
Sbjct: 139 DSGLAVPTYIYAQLY----PHQRQCLEWLH-----WLHERNT-GGILGDEMGLGKTVEIV 188
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
A + + G ++ +++ P S++ W E KW I L ST VV
Sbjct: 189 AYVAAM-----HGAHRLRSVLLLCPASVLLQWTREFHKWYPK--MRITLLHSTGSGVVLS 241
Query: 287 IDSFTDPCSSL--------------------QVLIVSYETFRMHSSKFSCSESCDLLICD 326
S+T+ + V++ +YE R + + + D ++ D
Sbjct: 242 NKSYTELVHEIVENHRREDTSQQADNFTGTGGVILTTYENAR-QNQQLLLNIDWDYVVLD 300
Query: 327 EAHRLKN---DQTLTNR----------------NDLEEFFAMVNFTNPGILGDAAYFRRY 367
E HR++N D +L + N L E +++ +F PG LG F
Sbjct: 301 EGHRIRNPDADISLVCKQFRTVHRLILTGTPIQNHLRELWSLFDFVYPGKLGTLPTFEDE 360
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN--HLPPKIIEVVCC 425
+ I G A++ + + + + L +N ++LRRT + + LP K+ ++ C
Sbjct: 361 FVLPIKTGGYANASKMQVVMAYKCALVLRDVINPYMLRRTKKEIQDTLELPEKMEHILFC 420
Query: 426 KLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT 485
+LT Q + Y ++ S V R +S E + + I+ L+ LCNHP L+ ++G+ +
Sbjct: 421 RLTAYQHDQYEAYLRSPEVARVLSYELRPFRA---ISTLRHLCNHPDLVK---RAGDEAS 474
Query: 486 TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNY 545
S GS +E SGKM VL ++L + + R++L +
Sbjct: 475 R--------------SENFGS--------IEKSGKMLVLCKILAMWKDQ-GHRVLLFTQT 511
Query: 546 TQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNL 605
LD+ +L Y + RLDG+T + +RQ+L++ FND F+FLL+++AGG G+NL
Sbjct: 512 RMMLDILERLMEHLGYNHCRLDGSTPVKERQRLLDKFNDAESGIFIFLLTTRAGGIGINL 571
Query: 606 IGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ 665
G NR+V+FDPDWNP+ D QA R WR GQ K+V IYR +++GTIEEK+Y RQ+ K+ L
Sbjct: 572 AGANRVVIFDPDWNPSTDMQARERSWRIGQIKQVTIYRLITSGTIEEKIYHRQIFKQYLT 631
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENM 706
+ + + + LRDLFT + E E M
Sbjct: 632 TKVLHD-----PKRKRCFNRHTLRDLFTLASGAQPEAKEGM 667
>gi|332025493|gb|EGI65656.1| DNA excision repair protein ERCC-6 [Acromyrmex echinatior]
Length = 1020
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 270/555 (48%), Gaps = 68/555 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ---GFDGK 240
L +Q+ V++++E S L G +L D+MGLGKT++ IA L L C + G+
Sbjct: 237 LYRYQKVAVKWLWELHSRKL------GGLLGDEMGLGKTVEIIAFLAGLDCSELLSYHGR 290
Query: 241 PM-VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQ 298
+ IIV P +L+ W +W RV ++ D S I+S
Sbjct: 291 YRGLGPTIIVCPATLMEQWVKHFHEWWPFFRVVVLHHSGGYNGDPESLIESLQIGG---- 346
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------ 340
+LI SY H S+ +I DE H+++N Q +R
Sbjct: 347 ILITSYNGVLKHKDLLVSSQ-WHYVILDEGHKIRNPQAKVSRAVKRFSTPHRLLLTGSPM 405
Query: 341 -NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
N L+E +++ +F PG LG F + I G AT ++ ++ ++ L +
Sbjct: 406 QNSLKELWSLFDFILPGKLGTLPVFLEHCAMPITRGGYTNATPLQEATALQIATMLKNTI 465
Query: 400 NQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK---- 453
++LRRT + +HL P K +V+ C LT Q +LY ++ S +V + E
Sbjct: 466 TPYMLRRTKTDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYLCSDDVSFVLHERNYCSSG 525
Query: 454 --QSKILAYITALKKLCNHPKL-IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+++ L ++AL+K+CNHP L +Y + + ++ I F
Sbjct: 526 RYRARFLIALSALRKICNHPDLFLYTREQDSDEDIDLSDEQIEKF--------------- 570
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
+ + +GKM V+ LL + Q+ R++L + Q + + L + +Y YLR+DGTT
Sbjct: 571 --GYYKRAGKMTVVRSLL-KIWQKQGHRVLLFTQGRQMMHILESLLQREKYIYLRMDGTT 627
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
++S+RQ+ + FN+ S + FVFLL+++ GG G+NL G NR+V++DPDWNPA D QA R
Sbjct: 628 AMSQRQQTIQKFNNDS-SYFVFLLTTRVGGLGINLTGANRVVIYDPDWNPATDAQARERA 686
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
WR GQ K+V +YR ++ GTIEEK+Y RQ+ K L + E Q DL +
Sbjct: 687 WRIGQNKQVTVYRLITAGTIEEKIYHRQIFKLLLSNKVLDE-----PRQRQLFKPTDLVE 741
Query: 691 LFTFHDDVRSEIHEN 705
LF ++ + E E+
Sbjct: 742 LFNLNEPITGEFSES 756
>gi|297744167|emb|CBI37137.3| unnamed protein product [Vitis vinifera]
Length = 1116
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 290/618 (46%), Gaps = 116/618 (18%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+GG +P ++ L + Q+ GVQ+++E L+ + G I+ D+MGLGKT+Q +
Sbjct: 388 EGGLRIPESIFSKLFDY----QKVGVQWLWE-----LHCQQV-GGIIGDEMGLGKTIQVL 437
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
+ L L M K +I++ P +L+ W+ E KKW +L +++ S
Sbjct: 438 SFLGALHFSN-----MYKPSIVICPVTLLRQWKREAKKWYQN-----SLDSDDEENLSSK 487
Query: 287 ----IDSFTDPCSSLQ--VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND------ 334
DS + Q +LI +YE R+ + K I DE HR++N
Sbjct: 488 DTKKWDSLINRVLRSQSGLLITTYEQIRLQAGKL-LDIKWGYAILDEGHRIRNPNAEVTI 546
Query: 335 -----QTLTN--------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
QT+ +N L E +++ +F PG LG F + I G AT
Sbjct: 547 LCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVFPGKLGVLPVFEAEFAVPISVGGYANAT 606
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + L + ++LRR A ++ LP K V+ C LT Q +Y F+ S
Sbjct: 607 PLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTTEQRSVYRAFLAS 666
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLI-----YDTIKSGNPGTTGFEDCIRFFP 496
V++ I + ++ S L I ++K+CNHP L+ Y GNP
Sbjct: 667 SEVEQ-IFDGSRNS--LYGIDVMRKICNHPDLLEREHAYQNPDYGNP------------- 710
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
E SGKM V+A +L +++ R++L + Q LD+
Sbjct: 711 -------------------ERSGKMKVVAHVLKGWKEQ-GHRVLLFAQTQQMLDILENFL 750
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
Y Y R+DG T I R L++ FND S + F+F+L++K GG G NL G NR++++DP
Sbjct: 751 IAGGYVYRRMDGFTPIKHRMALIDEFND-SDDVFIFILTTKVGGLGTNLTGANRVIIYDP 809
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDS 675
DWNP+ D QA R WR GQ + V +YR ++ GTIEEKVYQRQ+ K L K+++ Q
Sbjct: 810 DWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQ--- 866
Query: 676 SATQGNFLSTEDLRDLFTFHDD----------VRSEIHENMHCT-RCQNYDDGAESI--- 721
Q F D++DLF +DD + S++ E+++ + ++ D +SI
Sbjct: 867 ---QKRFFKARDMKDLFVLNDDGEDASTETSNIFSQLSEDVNVVGKHKDSQDKQKSIIPV 923
Query: 722 -GEGDETNSANKNDQSDQ 738
GE + K+DQSD+
Sbjct: 924 SGENE------KDDQSDE 935
>gi|355567955|gb|EHH24296.1| hypothetical protein EGK_07933, partial [Macaca mulatta]
Length = 713
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 296/602 (49%), Gaps = 97/602 (16%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P TV+ R+LR +QREG QF++ IHG CIL DDMGLGKT+
Sbjct: 120 SDDGDSIPYTVN----RYLRDYQREGAQFLY--------GHYIHGRGCILGDDMGLGKTV 167
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L +G +P A +IV P S++ NW+ E+
Sbjct: 168 QVISFLAAVLHKKGTREDIENNRPEFLLRGMKKEPPSSAAKKIFLIVAPLSVLYNWKDEL 227
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E +
Sbjct: 228 DTW--GYFRVTILHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLEWSAV 280
Query: 323 LICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAY 363
++ DEAHR+KN + LT +N+++E + ++++ PG+LG
Sbjct: 281 IV-DEAHRIKNPKARITEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGTRTC 339
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ +++ + LRRT AL+ + LP K +V
Sbjct: 340 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLARRMSGWFLRRTKALIKDQLPKKEDRMV 399
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 400 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 459
Query: 461 ITALKK-LCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVEL 517
+T L+K L + ++KS + T C + F P+ F +S + +
Sbjct: 460 LTVLQKYLAPCFGNLKKSLKSNDQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKY 518
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K
Sbjct: 519 SGKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLK 577
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
+V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 578 IVKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCR 636
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTF 694
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF
Sbjct: 637 DVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGI 693
Query: 695 HD 696
H+
Sbjct: 694 HN 695
>gi|355753484|gb|EHH57530.1| hypothetical protein EGM_07189, partial [Macaca fascicularis]
Length = 713
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 295/602 (49%), Gaps = 97/602 (16%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P TV+ R+LR +QREG QF++ IHG CIL DDMGLGKT+
Sbjct: 120 SDDGDSIPYTVN----RYLRDYQREGAQFLY--------GHYIHGRGCILGDDMGLGKTV 167
Query: 224 QSIALLYTLL-----------------CQGFDGKP----MVKKAIIVTPTSLVSNWEAEI 262
Q I+ L +L +G +P K +IV P S++ NW+ E+
Sbjct: 168 QVISFLAAVLHKKGTREDIENNRPEFLLRGMKKEPPSSAAKKMFLIVAPLSVLYNWKDEL 227
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 228 DTW--GYFRVTILHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLEW-SA 279
Query: 323 LICDEAHRLKNDQT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + LT +N+++E + ++++ PG+LG
Sbjct: 280 VIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGTRTC 339
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ +++ + LRRT AL+ + LP K +V
Sbjct: 340 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLARRMSGWFLRRTKALIKDQLPKKEDRMV 399
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 400 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSY 459
Query: 461 ITALKK-LCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVEL 517
+T L+K L + ++KS + T C + F P+ F +S + +
Sbjct: 460 LTVLQKYLAPCFGNLKKSLKSNDQETLIKRICDQVFSRFPD-FVQKSKDAAFETLSDPKY 518
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K
Sbjct: 519 SGKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLK 577
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
+V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ +
Sbjct: 578 IVKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCR 636
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTF 694
V + R +S GT+EE +Y RQ+ K+ L V+ + + A QG S E +LF
Sbjct: 637 DVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGI 693
Query: 695 HD 696
H+
Sbjct: 694 HN 695
>gi|125833380|ref|XP_688972.2| PREDICTED: DNA excision repair protein ERCC-6 [Danio rerio]
Length = 1390
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 265/555 (47%), Gaps = 87/555 (15%)
Query: 179 LLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG 236
L + L +Q+ GV++M+E C G IL D+MGLGKT+Q IA L L
Sbjct: 479 FLWKKLFKYQQTGVRWMWELHCQQA--------GGILGDEMGLGKTIQIIAFLAGLSYSK 530
Query: 237 FDGK------PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
+ + +IV P +++ W E W R V+ SF
Sbjct: 531 LKTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTW----------WPPFRVAVLHDTGSF 580
Query: 291 T--------DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--- 339
T + +S +LI SY R+ + +I DE H+++N
Sbjct: 581 TSKKEKLIPEIVASHGILITSYSYIRIMQD-YIQRYDWHYVILDEGHKIRNPNAGVTTAC 639
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+N+L+E +++ +F PG LG F + I G A+
Sbjct: 640 KQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPV 699
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHS 441
+ + + + L +N ++LRR A + +L P K +V+ C+LT Q ++Y F+ S
Sbjct: 700 QVQTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDS 759
Query: 442 KNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFS 501
K V + ++ + + + + + AL+K+CNHP L TG +R P + +
Sbjct: 760 KEVYQILNGDMQ---VFSGLIALRKICNHPDLF-----------TGGPRLLRGIPHDQLT 805
Query: 502 GRS--GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
G W + SGKM V+ LL L + R++L + Q L++ +E
Sbjct: 806 EEEHFGYW--------KRSGKMIVVESLL-RLWHKQGHRVLLFTQSRQMLEILEVFVKEN 856
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
+ YL++DGTT+I+ RQ L+ FN +K+ FVF+L+++ GG G+NL G NR+V++DPDWN
Sbjct: 857 GFSYLKMDGTTTIASRQPLIAQFNQ-NKDIFVFILTTRVGGLGVNLTGANRVVIYDPDWN 915
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
P+ D QA R WR GQK++V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q
Sbjct: 916 PSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQ 970
Query: 680 GNFLSTEDLRDLFTF 694
F + D+ +LFT
Sbjct: 971 RRFFKSNDIYELFTL 985
>gi|47211681|emb|CAF92845.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 184/294 (62%), Gaps = 36/294 (12%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L + LRPHQREGV+F++ECV+G G +GCI+AD+MGLGKTLQ IAL++TLL Q D
Sbjct: 82 LGKVLRPHQREGVKFLWECVTGR-RIPGSYGCIMADEMGLGKTLQCIALVWTLLRQSPDL 140
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL-- 297
KP + KAI+V+P+SLV NW +E++KW+GGRV + + T+D++ + SF
Sbjct: 141 KPEIDKAIVVSPSSLVRNWSSEVQKWLGGRVHPLVIDGGTKDEIDRQLVSFISQRGRRVP 200
Query: 298 -QVLIVSYETFRMHSSKFSCSESCDLLICDE------------AHRLKNDQTLTNR---- 340
VLI+SYETFR+H++ S L+ICDE HRLKN T +
Sbjct: 201 SPVLIISYETFRLHAAVLH-RGSVGLVICDELVLRLTCCCDVEGHRLKNADNQTYQALNA 259
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
NDL E+F++V+F N GILG A F++ +E I+ GR+ A E+E+
Sbjct: 260 MVAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADAKEQER 319
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
+ G E+ S+L VN+ ++RRT+ +LS +LP K+ +VVCC+L+PLQ ELY F+
Sbjct: 320 QAGEEKLSQLIGVVNRCLIRRTSDILSKYLPVKVEQVVCCRLSPLQKELYKRFL 373
>gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax Sal-1]
gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax]
Length = 1399
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 269/532 (50%), Gaps = 76/532 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
++P+Q EG+ ++++ +N ILAD+MGLGKTLQ+I +LLC K +
Sbjct: 317 MKPYQIEGLNWLYQLYRHRING------ILADEMGLGKTLQTI----SLLCYLRFNKNIK 366
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+K+II+ P S + NW EIKKW + ++ TD VL+ +
Sbjct: 367 RKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGSKEQRRELNKNVLHTD----YDVLLTT 422
Query: 304 YE-TFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---------NDL 343
YE + S+ F L+ DEAHR+KND+++ NR N+L
Sbjct: 423 YEIVIKDKSALFDID--WFFLVIDEAHRIKNDKSVLSSSVRFLRSENRLLITGTPLHNNL 480
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
+E ++++NF P I ++ F + S I + E ++L + F+
Sbjct: 481 KELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDNKQNE--------IITQLHTILKPFM 532
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR + LPPK V ++ LQ +LY+ + SKN+ + ++++L +
Sbjct: 533 LRRLKVEVEQSLPPKREIYVFVGMSKLQKKLYSDIL-SKNIDVINAMTGSKNQMLNILMQ 591
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D I+ PP + G+ +E SGKM +
Sbjct: 592 LRKCCNHPYL-FDGIEE---------------PP---------YIEGN-HLIETSGKMSL 625
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL L+ + + R++L S T+ LD+ CR + Y YLR+DG+T +RQ +N FN
Sbjct: 626 LDKLLPRLK-KENSRVLLFSQMTRVLDIIDDYCRWKNYEYLRIDGSTVGDERQIRINQFN 684
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
+P+ F+FLLS++AGG G+NL + ++LFD D+NP D QA R R GQKK+V +YR
Sbjct: 685 EPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKKVIVYR 744
Query: 644 FLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSATQGNFLSTEDLRDLFTF 694
F++ ++EEK+ +R K L +IQ+ + + + + N ++L D+ F
Sbjct: 745 FVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNHKENN---KQELHDILNF 793
>gi|443429408|gb|AGC92693.1| DNA excision repair protein ERCC-6-like protein [Heliconius erato]
Length = 947
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 161/561 (28%), Positives = 268/561 (47%), Gaps = 88/561 (15%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH----GCILADDMGLGKTLQSIALL 229
+++ + + L +Q+ GV++++E +H G +L D+MGLGKT+Q IA L
Sbjct: 166 LSIPNYIWKRLYTYQKVGVKWLWE----------LHQVQSGGLLGDEMGLGKTVQIIAFL 215
Query: 230 YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDS 289
L + II+ P +++ W + W C + R V+ S
Sbjct: 216 AGLSKSDSGSWGGLGPTIILAPATVIYQWVSHFHYW----------CPNLRVAVLHHSGS 265
Query: 290 --------FTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR- 340
+ SS +L+++Y + ++ +I DE H+++N T ++
Sbjct: 266 HGGNHQKLIRELHSSHGILLITYNGIVKYIKDL-LTKKWHYVILDEGHKIRNPDTQVSKL 324
Query: 341 ------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATE 382
N L+E +++ +F PG+LG F ++ T I G AT+
Sbjct: 325 VKKFDTPHKILITGSPMQNSLQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANATQ 384
Query: 383 EEKKLGIERSSELSAKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNHFIH 440
++ +E + L + +ILRRT A + H LP K +V+ C LT Q +LY ++
Sbjct: 385 HQEATALEIAKALKNIITPYILRRTKAEVQEHIKLPEKNEQVLFCALTREQRDLYMGYLM 444
Query: 441 SKNVKRAISEETK-----QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
S V+ + ++ K ++++L +T L+K+CNHP L +
Sbjct: 445 SSTVRSILDKDFKFGDPFRARVLVALTTLRKICNHPDL---------------------Y 483
Query: 496 PPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
E G W + SGKM V+ LL + + R ++ S L + Q
Sbjct: 484 LYEAHDDDEEIDEESFGNW-KRSGKMSVVHSLLK-IWLKQGHRTLIFSQSRAMLCILEQH 541
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
++ ++ YL++DGT S+++RQ L+ FN+ +K VFL +++ GG G+NL G +R++++D
Sbjct: 542 LQKHKFEYLKMDGTVSVAQRQNLIKTFNENAKY-LVFLATTRVGGLGVNLTGADRVIIYD 600
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDS 675
PDWNPA D QA R WR GQ++ V +YR LS GTIEEK+YQRQ+ K L I +
Sbjct: 601 PDWNPATDNQAKERAWRIGQQRNVTVYRLLSAGTIEEKIYQRQIFKNFLSNKILVD---- 656
Query: 676 SATQGNFLSTEDLRDLFTFHD 696
Q N L+T +L+ LF D
Sbjct: 657 -PNQKNVLTTSNLQTLFNLED 676
>gi|348665749|gb|EGZ05578.1| hypothetical protein PHYSODRAFT_533639 [Phytophthora sojae]
Length = 1086
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 179/605 (29%), Positives = 280/605 (46%), Gaps = 101/605 (16%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G LVP V L + L PHQRE ++++ + L+ G+ G IL DDMGLGKT+Q +
Sbjct: 224 GLLVPSYV---LTQLL-PHQRECLEWLHK-----LHERGV-GGILGDDMGLGKTVQLASF 273
Query: 229 LYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---------ALCES 278
L +L ++ +++ P S++ W E+ KWV RV L+ +
Sbjct: 274 LGSL-----HRARRLRTVLLLCPASVLLQWVRELHKWVPWMRVVLLHASGTGVSTSFSSD 328
Query: 279 TRDDVVSGIDSFTDPCSSLQ-------------------VLIVSYETFRMHSSKFSCSES 319
+ + ++ + F D S + V+I +YE R + S F E
Sbjct: 329 SYEQLIDEVFRFEDEMSGDEADGGDEFSGMGGHAPTGGGVVISTYENVRQYQSLFLTRE- 387
Query: 320 CDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGD 360
D ++ DE HR++N T +N L E +++ +F PG LG
Sbjct: 388 WDYVVLDEGHRIRNPDAETTLACKQLRTVHRIILSGTPIQNRLRELWSLFDFVYPGRLGT 447
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNA-LLSNH----- 414
F + I G TAT+ + + + + L + F+LRRT +L+N
Sbjct: 448 LPTFDDEFVLPIRAGGYATATKMQVLMAYKCALALKDLIQPFLLRRTKQEVLTNGASGKM 507
Query: 415 ---LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHP 471
LP K +++ C+LT Q LY F+ S V + + + + I+ L+ +CNHP
Sbjct: 508 GALLPGKQEQILFCRLTKRQRALYKRFLASPEVASVLRRDIRPFRA---ISVLRHICNHP 564
Query: 472 KLI---------------YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
L+ YD + G D G S G A
Sbjct: 565 DLLASFGDGRLADKRRQKYDDDEDNEEEQEGLTDLAGMLDEVDDEGESDEPFGAASA--- 621
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
SGKM VL ++LG L + R+++ + LD+ + + RLDGTT +++RQ
Sbjct: 622 -SGKMIVLQKILG-LWKEQGHRVLIFTQTRSMLDILESFMSRQGHACCRLDGTTGVAERQ 679
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
+ ++ FN P F FLL+++AGG G+NL+G +R+V+FDPDWNP+ D QA R WR GQ+
Sbjct: 680 QRLDAFNAPDSELFAFLLTTRAGGIGVNLVGADRVVVFDPDWNPSTDVQARERAWRIGQQ 739
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
K+V +YR ++ GTIEEK+Y RQ+ K+ L + + A + + LRDLF D
Sbjct: 740 KQVTVYRLVTAGTIEEKIYHRQIFKQYLTSKVLHD-----AKRKRCFNKHTLRDLFVLAD 794
Query: 697 DVRSE 701
+ E
Sbjct: 795 EKEEE 799
>gi|389583592|dbj|GAB66326.1| helicase [Plasmodium cynomolgi strain B]
Length = 1455
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 292/604 (48%), Gaps = 92/604 (15%)
Query: 92 PPCSNGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPP 151
PP + ++L + L KR+ S + + +++ ++ + R EE++ L
Sbjct: 276 PPSEEKVNYLQEKLEQLLSETKRYTEKLSGQRLKMSVQSKANRTRRCAMTEKEEDYMLLK 335
Query: 152 GV----DPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG 207
+ ++ QP N G ++P+Q EG+ ++++ +N
Sbjct: 336 DANEEDETFIIKQP---ANING-------------CMKPYQIEGLNWLYQLYRHRING-- 377
Query: 208 IHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267
ILAD+MGLGKTLQ+I +LLC K + +K+II+ P S + NW EIKKW
Sbjct: 378 ----ILADEMGLGKTLQTI----SLLCYLRFNKNIKRKSIIICPRSTLDNWYQEIKKWCT 429
Query: 268 GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYE-TFRMHSSKFSCSESCDLLICD 326
+ ++ TD VL+ +YE + S+ F L+ D
Sbjct: 430 EMKAFKYYGSKEQRRELNKNVLHTD----YDVLLTTYEIVIKDKSALFDID--WFFLVID 483
Query: 327 EAHRLKNDQTL----------TNR---------NDLEEFFAMVNFTNPGILGDAAYFRRY 367
EAHR+KND+++ NR N+L+E ++++NF P I ++ F
Sbjct: 484 EAHRIKNDKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNL 543
Query: 368 YETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKL 427
+ S I + +E ++L + F+LRR + LPPK V +
Sbjct: 544 FNISKISLNDNKQSE--------IITQLHTILKPFMLRRLKVEVEQSLPPKREIYVFVGM 595
Query: 428 TPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
+ LQ +LY+ + SKN+ + ++++L + L+K CNHP L +D I+
Sbjct: 596 SKLQKKLYSDIL-SKNIDVINAMTGSKNQMLNILMQLRKCCNHPYL-FDGIEE------- 646
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
PP + G+ +E SGKM +L +LL L+ + + R++L S T+
Sbjct: 647 --------PP---------YVEGN-HLIETSGKMSLLDKLLPRLK-KENSRVLLFSQMTR 687
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
LD+ CR + Y YLR+DG+T +RQ +N FN+P+ F+FLLS++AGG G+NL
Sbjct: 688 VLDIIDDYCRWKNYEYLRIDGSTVGDERQIRINQFNEPNSKYFIFLLSTRAGGIGINLTT 747
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 667
+ ++LFD D+NP D QA R R GQKK+V +YRF++ ++EEK+ +R K L +
Sbjct: 748 ADIVILFDSDYNPQMDIQAMDRAHRIGQKKKVIVYRFVTQNSVEEKIVERAAKKLKLDSL 807
Query: 668 IQQE 671
I Q+
Sbjct: 808 IIQK 811
>gi|380029956|ref|XP_003698629.1| PREDICTED: DNA excision repair protein ERCC-6-like [Apis florea]
Length = 987
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 267/554 (48%), Gaps = 71/554 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGF--DGKP 241
L +Q+ VQ+++E L G +L D+MGLGKT+Q IA L L C DG
Sbjct: 178 LYKYQKISVQWLWELHLRSL------GGLLGDEMGLGKTVQVIAFLAGLDCSELLSDGGR 231
Query: 242 M--VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV 299
+ I++ P +L+ W +W ++++ L +S + ++ D S +
Sbjct: 232 FRGLGPTIVICPATLMEQWVKHFHEW-WPLLRIVVLHQSGTYN--GNLEYLIDSLKSGGI 288
Query: 300 LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------- 340
+I SY H S +I DE H+++N Q ++
Sbjct: 289 IITSYSGMLKHKD-LLVSNQWHYVILDEGHKIRNPQAKVSKAVKEFSTPHRLLLTGSPMQ 347
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N L+E +++ +F PG LG F + I G AT ++ ++ + L +
Sbjct: 348 NSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANATPLQEATALQVAMMLRDAIT 407
Query: 401 QFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK----- 453
++LRRT + +H LP K +V+ C LT Q +LY ++ S +V + E+
Sbjct: 408 PYMLRRTKNDVQHHVSLPEKNEQVLFCSLTEEQKKLYKKYLCSTDVSFILHEKNNIENGK 467
Query: 454 -QSKILAYITALKKLCNHPKLIYDT--IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
++++L ++AL+K+CNHP L T I S E +F
Sbjct: 468 YRARLLIALSALRKICNHPDLYLYTSPIDSDEDIDISNETLEKF---------------- 511
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
G W + SGKM ++ R L + ++ R++L + Q + + L + +Y YLR+DGTT
Sbjct: 512 -GYW-KRSGKM-IVVRSLLKIWKKQGHRVLLFTQGRQMMHVLESLVQSEQYTYLRMDGTT 568
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
+S RQ+ + FN S + F+FLL+++ GG G+NL G NR+V++DPDWNPA D QA R
Sbjct: 569 PMSHRQETIRSFNRDS-SYFIFLLTTRVGGLGVNLTGANRVVIYDPDWNPATDAQARERA 627
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
WR GQ K V IYR ++ GTIEEK+Y RQ+ K++ + Q T DL +
Sbjct: 628 WRIGQNKNVTIYRLITAGTIEEKIYHRQIF-----KILLSNKVLEDPRQRRLFKTNDLVE 682
Query: 691 LFTFH---DDVRSE 701
LF F+ DD SE
Sbjct: 683 LFNFNESTDDHSSE 696
>gi|358391786|gb|EHK41190.1| hypothetical protein TRIATDRAFT_321436 [Trichoderma atroviride IMI
206040]
Length = 1877
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 266/541 (49%), Gaps = 73/541 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
++ HQ +GV+F++ + +LNA GC+LA MGLGKT+Q I LL + +
Sbjct: 901 IKDHQIKGVRFLWNQI--ILNADLRQGCLLAHTMGLGKTMQVITLLVAIAEASHSDNEAI 958
Query: 244 K----------KAIIVTPTSLVSNWEAEIKKW----VGGRVQLIALCESTRDDVVSGIDS 289
K +++I+ P LV NW EI W + G V + +S + + +S I+
Sbjct: 959 KAQIPMDLRTSQSLIICPAGLVINWLEEINAWSPEGILGNVFKVESAQS-KSNQISTIEY 1017
Query: 290 FTDPCSSLQVLIVSYETFRMHSS-----KFSCSESCDLLICDEAHRLKNDQT-------- 336
+ + VL++ +E F+ + K ++ +++ICDEAH +KN +
Sbjct: 1018 WAEYGG---VLVMGHEMFKRTRAENDNMKQILTDKANIVICDEAHTMKNPDSQLHQVCQD 1074
Query: 337 -LTNR----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
LT R N+++E+++M+N+ P LG F Y I G + ++ EK
Sbjct: 1075 FLTRRRIALTGSPLSNNIKEYYSMINWVAPRYLGPQKEFADIYAEPIERGLDRESSWSEK 1134
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ ++ L V + R T ++ + LPPK V+ K PLQ +LY +++
Sbjct: 1135 RKALKMLEVLKMTVAPKVQRATVQVVKHELPPKYEFVLFVKPNPLQEKLYGIYLNE---- 1190
Query: 446 RAISEETKQSKILAYITALKKLCNHP----------KLIYDTIKSGN-----PGTTGFED 490
+ + ++ ++ ++ L +CNHP K T K+ PG G +D
Sbjct: 1191 --MVAASSKTSVVKFVAQLGVICNHPRCFRQLMLNEKAASKTPKAAQQSVRGPGDEGTDD 1248
Query: 491 CIRF------FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
FPP M S G D A ELS K+ +L +L R D++++ S
Sbjct: 1249 ESESHGRSTKFPPNMISTVLKETNGKDIANPELSQKVALLLVVLDQARA-MGDKVLVFSE 1307
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEF-VFLLSSKAGGCGL 603
TLD +L +++R RLDG+T +SKRQ +V FN E ++L+S+KAGG GL
Sbjct: 1308 SILTLDYLEELFKQQRRAVQRLDGSTPVSKRQGMVKAFNTGKAGESEIYLISTKAGGVGL 1367
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
N+ G NR+V+FD WNP N++QA R +R GQ+K V++YRF+ G+ EE + R + K
Sbjct: 1368 NIQGANRVVIFDFKWNPVNEQQAVGRSYRFGQQKTVYVYRFVIAGSFEEGLQNRSIFKTQ 1427
Query: 664 L 664
L
Sbjct: 1428 L 1428
>gi|242018945|ref|XP_002429929.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514975|gb|EEB17191.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1234
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 190/619 (30%), Positives = 292/619 (47%), Gaps = 95/619 (15%)
Query: 136 RTVENNVIEENFTLPPGVDPLVL-WQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQF 194
R E + I E +++ LVL + PE + + VD LV L+PHQREGV+F
Sbjct: 526 RLSERHKIFEKYSVNSNDSKLVLDFDPETREE------LLVVDENLVCNLKPHQREGVKF 579
Query: 195 M----FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVT 250
M FE + + +G GCILA MGLGKTLQ I L +TLL V+ +I+
Sbjct: 580 MWDSCFESLKRMEEDSG-SGCILAHCMGLGKTLQVITLSHTLLTNN----TGVQSILILC 634
Query: 251 PTSLVSNWEAEIKKWVGGRVQLIALCES-TRDDVVSGIDSFTDPCSSLQVLIVSYETFRM 309
P S V NW E W+ + I + E T I + VLI+SY FR+
Sbjct: 635 PLSTVQNWVKEFYYWLKKCKKRIKIFEVVTCKTKKLKIKKIKSWKENGGVLIMSYNGFRL 694
Query: 310 HSSKFSCSESC----------DLLICDEAHRLKNDQT----------------LTN---R 340
++ S DL++CDE H LKN+++ LT +
Sbjct: 695 MTNNKKNENSKYLTAFLNPGPDLVVCDEGHLLKNEKSCLALCVSQLKTLRRIVLTGTPLQ 754
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N+L E+F MV F P ILG F + I G+ +T+ + ++ R+ L + V
Sbjct: 755 NNLIEYFCMVEFVKPSILGTKREFMNGFVNPIKNGQFEDSTQSDVRIMKRRAHVLHSLVE 814
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY 460
FI R +L + LP K V+ LT Q ELY F+ + + ++ +
Sbjct: 815 GFIQRFGYYVLKSLLPEKQEYVIKICLTETQEELYRTFV------KNYANFSENKSLFNT 868
Query: 461 ITALKKLCNHPKLIY---DTIKSGNPGTT----GFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ L+K+ HP++ + DT+ + T+ F DC + E F+
Sbjct: 869 FSWLQKIWTHPRVFHHALDTVSNDVDKTSQFAMAFADCNKILKEEEFTE----------- 917
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR------------- 560
+ SGK+ +L ++L Q D++++ S Y TL+L R
Sbjct: 918 -IRASGKLVLLFQILKICHQ-AGDKLLVFSQYLTTLNLIEYFLRFVNDNNNKNDECNTWV 975
Query: 561 --YPYLRLDGTTSISKRQKLVNHFNDPSKNEF-VFLLSSKAGGCGLNLIGGNRLVLFDPD 617
Y R+DGTT+ R FND + + L+S++AGG G+NL+ NR+++FD
Sbjct: 976 TGVDYYRIDGTTNSQSRFDYCKKFNDKNNKRLRLLLISTRAGGLGINLVSANRVIIFDVS 1035
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSS 676
WNP++D Q+ RV+R GQ+K +IYRFLS T+EEK+YQRQ++K L ++I + Q +
Sbjct: 1036 WNPSHDLQSIFRVYRFGQRKTCYIYRFLSEATMEEKIYQRQVTKLSLAHRIIDEHQIERH 1095
Query: 677 ATQGNFLSTEDLRDLFTFH 695
S +L++LFT++
Sbjct: 1096 ------FSMVNLQELFTYN 1108
>gi|171687146|ref|XP_001908514.1| hypothetical protein [Podospora anserina S mat+]
gi|170943534|emb|CAP69187.1| unnamed protein product [Podospora anserina S mat+]
Length = 1197
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 284/604 (47%), Gaps = 104/604 (17%)
Query: 161 PEEP--QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
P+EP Q + G +P + P L + Q+ GVQ++ E + + G I+ D+MG
Sbjct: 394 PDEPDHQFENGMKLPGDIYPSLFDY----QKTGVQWLAELYAQQV------GGIVGDEMG 443
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW----------VGG 268
LGKT+Q I+ + L KP+ I+V P +++ W E +W G
Sbjct: 444 LGKTVQLISFVAALHYSKMLNKPV----IVVAPATVLRQWVNEFHRWWPPLRVSILHSSG 499
Query: 269 RVQLIALCESTRDDVVSGIDSFTDPCSSL-------------QVLIVSYETFRMHSSKFS 315
L E ++DV D + SS VL+ +Y + +
Sbjct: 500 SGMFNVLDEGKKEDVEDNWDKKSPAKSSKAAKKIVDKVVKHGHVLVTTYAGLQTYGDVLI 559
Query: 316 CSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPG 356
E + DE H+++N T +N+L E +++ +F P
Sbjct: 560 PVE-WGYAVLDEGHKIRNPNTAITIYCKELRTPNRIILSGTPMQNNLTELWSLFDFIFPM 618
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
LG FR +E I G AT + + + L ++ ++L+R ++ LP
Sbjct: 619 RLGTLVSFRTQFEVPIKLGGYANATNLQIMTAQKCAETLKEAISPYLLQRLKVDVAADLP 678
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD 476
K +V+ CKL+ Q E Y F+ S + +I + ++QS L I L+K+CNHP L+
Sbjct: 679 KKSEQVLFCKLSKPQREAYELFLKSDEMA-SILDRSRQS--LYGIDILRKICNHPDLLNP 735
Query: 477 TIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTD 536
+K+ PG W VE SGKM V+ LL + +R
Sbjct: 736 RLKN-EPGYL--------------------WGS-----VEKSGKMAVVQSLL-PMWKRLG 768
Query: 537 DRIVLVSNYTQTLDL---FAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVF 592
+ +L S TQ LD+ F Q + RY LR+DG T I +RQ LV+ FN DPS + VF
Sbjct: 769 HKTLLFSQGTQMLDIIEAFVQRLDDVRY--LRMDGKTPIKQRQTLVDQFNNDPSLD--VF 824
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LL++K GG G+NL G NR+++FDPDWNP+ D QA R WR GQK+ V IYR ++ GTIEE
Sbjct: 825 LLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEE 884
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF--HDDVRSEIHENMHCTR 710
K+Y RQ+ K+ L + ++ Q NF + DL DLF+ ++D +E + +
Sbjct: 885 KIYHRQIFKQFLSNKVLKD----PKQQTNF-NLNDLHDLFSLSSYEDGMTETSQLFKGSE 939
Query: 711 CQNY 714
+N+
Sbjct: 940 AKNF 943
>gi|326523023|dbj|BAJ88557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1220
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 183/614 (29%), Positives = 280/614 (45%), Gaps = 128/614 (20%)
Query: 139 ENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFE- 197
E+ +IE++ LPP ++L +GG +P +V L + Q+ GVQ+++E
Sbjct: 379 EDEIIEDSDELPP----VIL--------EGGLRIPGSVYTQLFDY----QKVGVQWLWEL 422
Query: 198 -CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVS 256
C G I+ D+MGLGKT+Q ++ L L G M K +I++ P +L+
Sbjct: 423 HCQRA--------GGIIGDEMGLGKTVQVLSFLGALHDSG-----MYKPSIVICPVTLLQ 469
Query: 257 NWEAEIKKWVGG-RVQLIALC-------------------------ESTR-------DDV 283
W E KW +V+++ E TR DD+
Sbjct: 470 QWRREASKWYPKFKVEILHDSANSSSKKGKRYSDSESDVSWDSDQEEVTRVKPAQKWDDL 529
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND--------- 334
+S + + S +L+ +YE R+ K E + DE HR++N
Sbjct: 530 ISRVVN-----SGSGLLLTTYEQLRIIREKLLDIE-WGYAVLDEGHRIRNPNAEVTLVCK 583
Query: 335 --QTLTN--------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
QT+ +N L E +++ +F PG LG F + I G AT +
Sbjct: 584 QLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFETEFSVPITVGGYANATPLQ 643
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+ L + ++LRR A ++ LP K +V+ C LT Q Y F+ S V
Sbjct: 644 VSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPKKTEQVLFCSLTQEQRATYRAFLASSEV 703
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
++ I + + S L I L+K+CNHP L+ + NP
Sbjct: 704 EQ-IFDGNRNS--LYGIDVLRKICNHPDLLEREQAAQNP--------------------- 739
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
D +E SGKM V+ ++L + + R++L + Q LD+ R Y Y
Sbjct: 740 ------DYGNIERSGKMKVVEQILKVWKDQ-GHRVLLFAQTQQMLDILESFLTARDYQYR 792
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
R+DG T +R L++ FN+ + F+F+L++K GG G NL G NR+++FDPDWNP+ D
Sbjct: 793 RMDGLTPPKQRMALIDEFNN-TDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDM 851
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFL 683
QA R WR GQK+ V +YR ++ GTIEEKVY RQ+ K L KV++ Q Q F
Sbjct: 852 QARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQ------QRRFF 905
Query: 684 STEDLRDLFTFHDD 697
D++DLFT DD
Sbjct: 906 KARDMKDLFTLQDD 919
>gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H]
gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain
H]
Length = 1382
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 259/508 (50%), Gaps = 72/508 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
++P+Q EG+ ++++ +N ILAD+MGLGKTLQ+I+LL C K +
Sbjct: 302 MKPYQIEGLNWLYQLYRHKING------ILADEMGLGKTLQTISLL----CYLRFNKNIK 351
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+K+II+ P S + NW EIKKW ++ TD VL+ +
Sbjct: 352 RKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGNKEERRELNKNVLHTD----YDVLLTT 407
Query: 304 YE-TFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---------NDL 343
YE + ++ F L+ DEAHR+KND+++ NR N+L
Sbjct: 408 YEIVIKDKNALFDID--WFFLVIDEAHRIKNDKSVLSTSVRFLRSENRLLITGTPLHNNL 465
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
+E ++++NF P I ++ F + S I + +E ++L + F+
Sbjct: 466 KELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDNKQSE--------IITQLHTILKPFM 517
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR + LPPK V ++ LQ +LY+ + SKN+ + ++++L +
Sbjct: 518 LRRLKMEVEQCLPPKREIYVFVGMSKLQKKLYSDIL-SKNIDVINAMTGSKNQMLNILMQ 576
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D I+ PP + G+ +E SGKM +
Sbjct: 577 LRKCCNHPYL-FDGIEE---------------PP---------YIEGN-HLIETSGKMSL 610
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL L+ + + R++L S T+ LD+ CR ++Y YLR+DG+T +RQ +N FN
Sbjct: 611 LDKLLPRLK-KENSRVLLFSQMTRVLDIIDDYCRWKKYEYLRIDGSTVGDERQIRINQFN 669
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
+P+ F+FLLS++AGG G+NL + ++LFD D+NP D QA R R GQKK+V +YR
Sbjct: 670 EPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKKVIVYR 729
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
F++ T+EEK+ +R K L +I Q+
Sbjct: 730 FVTQNTVEEKIVERAAKKLKLDSLIIQK 757
>gi|338719517|ref|XP_001916162.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Equus caballus]
Length = 700
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 173/588 (29%), Positives = 281/588 (47%), Gaps = 93/588 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 149 SEDGDSIPYTIN----RYLRDYQREGAQFLYGHFIQG-------RGCILGDDMGLGKTVQ 197
Query: 225 SIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
+IV P S++ NW+ E+ W G ++ L + +D+ +
Sbjct: 198 MF--------------------LIVAPLSVLYNWKDELDTW--GYFRVTILHGNKKDNEL 235
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----- 339
+ ++ + +YET R+ + + E +I DEAHR+KN +
Sbjct: 236 IRVKQ-----RKCEIALTTYETLRLCLDELNSLE-WSAVIVDEAHRIKNPKARVTEVMKA 289
Query: 340 --------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
+N+++E + ++++ PG+LG F++ + + G+ TAT+ E
Sbjct: 290 LKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRINFKKQFSDPVEHGQRHTATKREL 349
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
G + L+ K++ + LRRT L+ + LP K +V C LT Q +Y + +++V
Sbjct: 350 ATGRKAMRRLAKKMSGWFLRRTKVLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVT 409
Query: 446 RAISE-----------------------ETKQSKILAYITALKKLCNHPKLIYDTIKSGN 482
+ ET ++ +Y+ L+K+ NH L+ S
Sbjct: 410 LILQSSEPCTCSSGRKRRNCCYKTNSHGETVKTLYFSYLAVLQKVANHVALLQAASASKQ 469
Query: 483 PGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
T C + F P+ F +S + + SGKM VL +LL H R + D+++
Sbjct: 470 QETLIKRICDQVFSKFPD-FVQKSKDAAFETLSDPKYSGKMKVLQQLLNHCR-KNKDKVL 527
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
L S T+ LD+ Q C Y RLDG T R K+V FN +++ + L+S+ AGG
Sbjct: 528 LFSFSTKLLDVLQQYCMASGLDYRRLDGNTKSEDRIKIVKEFNS-TQDVNICLVSTMAGG 586
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLN +G N +VLFDP WNPAND QA R +R GQ + V + R +S GT+EE +Y RQ+
Sbjct: 587 LGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVY 646
Query: 661 KEGLQKVI---QQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHEN 705
K+ L V+ + + A QG S E +LF ++ + HE+
Sbjct: 647 KQQLHCVVVGSENAKRYFEAVQG---SKEHQGELFGVYNLFKLRSHES 691
>gi|50290467|ref|XP_447665.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526975|emb|CAG60602.1| unnamed protein product [Candida glabrata]
Length = 1039
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 271/535 (50%), Gaps = 79/535 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ +M L+ I G ILAD+MGLGKTLQ+I+ L Y + +G P
Sbjct: 133 LRDYQIQGLNWMIS-----LHENKISG-ILADEMGLGKTLQTISFLGYLRYVKKIEG-PF 185
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLI 301
+++ P S + NW E KW ++ + R D++ I + VLI
Sbjct: 186 ----LVIVPKSTLDNWRREFFKWTPNVSTTVLQGTKEQRQDILQNIVL----EARFDVLI 237
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------ND 342
SYE + + + + ++ DEAHR+KN+Q+ ++ N+
Sbjct: 238 TSYEMV-IREKGYLKRLAWEYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNN 296
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + GD+ F +++ + +++++++ ++ +L A +N F
Sbjct: 297 LHELWALLNFLLPDVFGDSEVFDDWFQQN--------NSDQDQEVVVQ---QLHAVLNPF 345
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILAY 460
+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 346 LLRRIKADVEKSLLPKIETNVYVGMTDMQVQWYKSLLEKDIDAVNGAVGKREGKTRLLNI 405
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
+ L+K CNHP L ++ + G P TT D + +GK
Sbjct: 406 VMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNAGK 440
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL L+++ R+++ S ++ LD+ C R Y Y R+DG+TS +R ++
Sbjct: 441 MIVLDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRNYNYCRIDGSTSHEERIDAID 499
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
+N P+ +FVFLL+++AGG G+NL+ + +VLFD DWNP D QA R R GQKK+V
Sbjct: 500 EYNKPNSEKFVFLLTTRAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQVH 559
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A GN S +DL ++ +
Sbjct: 560 VYRFVTENAIEEKVLERAAQKLRLDQLVIQQGSGKKTANLGN--SKDDLIEMIQY 612
>gi|148692894|gb|EDL24841.1| mCG6355 [Mus musculus]
Length = 1330
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 230/456 (50%), Gaps = 41/456 (8%)
Query: 247 IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
IIV PT+++ W E W +A+ T D VLI SY
Sbjct: 490 IIVCPTTVMHQWVKEFHTWWPPF--RVAVLHETGSYTHKKERLIRDIVYCHGVLITSYSY 547
Query: 307 FRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----RNDLEEFFAMVNFTNPGILGDAA 362
R+ S +I DE H+++N +N+L E +++ +F PG LG
Sbjct: 548 IRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQNNLRELWSLFDFIFPGKLGTLP 606
Query: 363 YFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKII 420
F + I G A+ + K + + L +N ++LRR ++ +S LP K
Sbjct: 607 VFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNE 666
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
+V+ C+LT Q ++Y +FI SK V R ++ E ++I + + AL+K+CNHP L S
Sbjct: 667 QVLFCRLTDEQHKVYQNFIDSKAVYRILNGE---NQIFSGLVALRKICNHPDLF-----S 718
Query: 481 GNPGTTGFEDCIRFFPPE--MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR 538
G P PPE + + G W SGKM V+ LL + R R
Sbjct: 719 GGPKNASG-------PPEDELEEEQFGHW--------RRSGKMIVVESLL-KIWHRQGQR 762
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKA 598
++L S Q L + R +Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++
Sbjct: 763 VLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDT-SIFVFLLTTRV 821
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GG G+NL G NR++++DPDWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ
Sbjct: 822 GGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQ 881
Query: 659 MSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+ K+ L + ++ Q F + DL +LFT
Sbjct: 882 IFKQFLTNRVLKD-----PKQRRFFKSNDLYELFTL 912
>gi|261335950|emb|CBH09283.1| putative DNA excision repair protein ERCC-6 [Heliconius melpomene]
Length = 944
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 263/544 (48%), Gaps = 74/544 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIH----GCILADDMGLGKTLQSIALLYTLLCQGFDG 239
L +Q+ GV++++E +H G +L D+MGLGKT+Q IA L L
Sbjct: 171 LYTYQKVGVKWVWE----------LHQVQSGGLLGDEMGLGKTVQIIAFLAGLSKSDSGS 220
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQ 298
+ II+ P +++ W + W RV ++ S + I SS
Sbjct: 221 WGGLGPTIILAPATVIYQWVSHFHYWCPNLRVAVLHHSGSHGGNHQKLIKELH---SSHG 277
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------ 340
+L+++Y + ++ +I DE H+++N T ++
Sbjct: 278 ILLITYNGIVKYIKDL-LTKKWHYVILDEGHKIRNPDTQVSKLVKKFDTPHKILITGSPM 336
Query: 341 -NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
N L+E +++ +F PG+LG F ++ T I G AT+ ++ +E + L +
Sbjct: 337 QNSLQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANATQHQEATALEIAKALKNII 396
Query: 400 NQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK---- 453
+ILRRT A + H LP K +V+ C LT Q +LY ++ V+ + +++K
Sbjct: 397 TPYILRRTKAEVQEHIKLPEKNEQVLFCALTREQRDLYMGYLMGSTVRSILDKDSKFGDP 456
Query: 454 -QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
++++L +T L+K+CNHP L + E G
Sbjct: 457 IRARVLVALTTLRKICNHPDL---------------------YLYEAHDDDEDIDEESFG 495
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
W + SGKM V+ LL + + R ++ S L + Q ++ ++ YL++DG+ S+
Sbjct: 496 NW-KRSGKMSVVHSLLK-IWLKQGHRTLIFSQSRAMLCILEQHLQKHKFEYLKMDGSVSV 553
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
++RQ L+ FN+ +K VFL +++ GG G+NL G +R++++DPDWNPA D QA R WR
Sbjct: 554 AQRQNLIKTFNENAK-YLVFLATTRVGGLGVNLTGADRVIIYDPDWNPATDNQAKERAWR 612
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
GQ++ V +YR LS GTIEEK+YQRQ+ K L I + Q N L+T +L+ LF
Sbjct: 613 IGQQRNVTVYRLLSAGTIEEKIYQRQIFKNFLSNKILVD-----PNQKNVLTTSNLQTLF 667
Query: 693 TFHD 696
D
Sbjct: 668 NLED 671
>gi|256075325|ref|XP_002573970.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1323
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 184/616 (29%), Positives = 296/616 (48%), Gaps = 78/616 (12%)
Query: 129 TNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQ 188
T RL R E ++EE F V P + + DGG VP ++ L + Q
Sbjct: 161 TERLRRQRRTE--LLEEQFAREHEVHSS---NPSDGKLDGGFCVPGSIWSRLFDY----Q 211
Query: 189 REGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM-VKKAI 247
R+GV+++++ L+ G G I+ D+MGLGKT+Q IALL L + + + +
Sbjct: 212 RKGVKWLWD-----LHQKGC-GGIIGDEMGLGKTIQIIALLAGLHYSNIEDRSYRLGPTL 265
Query: 248 IVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
IV P ++++ W +E W RV ++ S I T+ S VL+ +Y T
Sbjct: 266 IVCPATVLNQWMSEFHSWWPPIRVAILHSTGSGYGKPNKLIQMITNNPGS--VLLTTYST 323
Query: 307 FRMHSSKFSCSESCDLLICDEAHRLKN---DQTLTNR----------------NDLEEFF 347
+ + S + +I DE H++KN + TL + N+L E +
Sbjct: 324 LVTYRDMLT-SRNWSYVILDEGHKIKNPEAEATLAVKHFSTPHRLILSGSPIQNNLRELW 382
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
++ +F PG LG F + + I G A+ + + + + L + +++RR
Sbjct: 383 SLFDFVCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCACTLRNLLKPYLIRRL 442
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
A + LP K +V+ C+LT Q +LY ++ S+ K ++ + I + L+ L
Sbjct: 443 KADVQIQLPAKSEQVLFCRLTDYQQKLYREYLESQVCKDLLN---GKGNIFPSLILLRNL 499
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG------SWTGGDGAWVELSGKM 521
CNHP L +G P + C F E S + G S++ S KM
Sbjct: 500 CNHPDL-----ATGGPR----DSC--FLNEEFESDKQGIENVCLSYSWSRFGCPRRSSKM 548
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
V+A LL + + +++L S + L L +L + ++ YLR+DGTT +S+R +L+
Sbjct: 549 LVVASLLKNWYDQ-GHKVLLFSQSRRMLTLLERLVQLMKFSYLRMDGTTPVSQRHELIRR 607
Query: 582 FNDPSKNE-------------FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
FN S ++ F+FLL+++ GG G+NL NR++++DPDWNP D QA
Sbjct: 608 FNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVLIYDPDWNPTTDLQARE 667
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R WR GQ + V IYR L++GTIEEK+Y RQ+ K+ L I + + Q F T DL
Sbjct: 668 RAWRIGQSRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRILK-----NPRQQRFFKTNDL 722
Query: 689 RDLFTFHDDVRSEIHE 704
++L TF D+ +I E
Sbjct: 723 QELLTFEDESDIQIPE 738
>gi|410078704|ref|XP_003956933.1| hypothetical protein KAFR_0D01520 [Kazachstania africana CBS 2517]
gi|372463518|emb|CCF57798.1| hypothetical protein KAFR_0D01520 [Kazachstania africana CBS 2517]
Length = 1028
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 277/548 (50%), Gaps = 83/548 (15%)
Query: 174 ITVDPLLVRF--LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-Y 230
+T P V+ LR +Q +G+ ++ L+ + G ILAD+MGLGKTLQ+I+ L Y
Sbjct: 120 VTESPSFVKSGKLRDYQIQGLNWLIS-----LHEHKLSG-ILADEMGLGKTLQTISFLGY 173
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGID 288
+ DG P +++ P S + NW+ E KW V + L + R ++V D
Sbjct: 174 LRYVKKIDG-PF----LVIVPKSTLHNWKREFNKWTP-EVNVCVLHGDKEARREIVH--D 225
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ + + L+ SYE S + LI DEAHR+KN+Q+ ++
Sbjct: 226 TILE--AKFDALVTSYEMVIREKSDLRKI-AWQYLIIDEAHRIKNEQSALSQIIRLLYSR 282
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
N+L E +A++NF P + GD+ F ++E + +EE++++ +
Sbjct: 283 NRLLITGTPLQNNLHELWALLNFLLPDVFGDSEIFEEWFEQN--------NSEEDQEVLV 334
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRA 447
+ +L +N F+LRR A + L PKI V +T +Q + Y + V A
Sbjct: 335 Q---QLHTVLNPFLLRRIKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGA 391
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
+ + ++++L + L+K CNHP L ++ + G P TT
Sbjct: 392 VGKREGKTRLLNIVMQLRKCCNHPYL-FEGAEPGPPYTT--------------------- 429
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
D + SGKM +L +LL L+ + R+++ S ++ LD+ C R Y Y R+D
Sbjct: 430 ---DEHLIFNSGKMIILDKLLKRLKAKGS-RLLIFSQMSRLLDILEDYCYFRDYEYCRID 485
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G+TS +R + ++ +N P ++FVFLL+++AGG G+NL+ + +VL+D DWNP D QA
Sbjct: 486 GSTSHEERIEAIDEYNKPDSSKFVFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAM 545
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTE 686
R R GQKK+V++YRF++ IEEKV +R K L Q VIQQ +A GN + +
Sbjct: 546 DRAHRIGQKKQVYVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGAGKKTAALGN--TKD 603
Query: 687 DLRDLFTF 694
DL ++ +
Sbjct: 604 DLVEMIQY 611
>gi|310789538|gb|EFQ25071.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1153
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 183/607 (30%), Positives = 286/607 (47%), Gaps = 98/607 (16%)
Query: 133 DLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGV 192
D P VE+N EE F P+ P + G+ + + + + L +Q+ GV
Sbjct: 346 DEPPAVEDNGEEEWFKP----------SPDHPDYEFGDNLKLKLPGDIHPSLFAYQKTGV 395
Query: 193 QFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPT 252
++ E L G+ G I+ D+MGLGKT+Q+IA + L KP+ I+V P
Sbjct: 396 NWLAE-----LYEQGV-GGIIGDEMGLGKTVQAIAFVAALHYSKILDKPV----IVVVPA 445
Query: 253 SLVSNWEAEIKKWVGG-RVQ--------LIALCESTRDDVVSGIDSFTDPCSSL------ 297
+++ W E +W RV +I + E D+ SG +
Sbjct: 446 TVMQQWVNEFHRWWPALRVSILHSSGSGMINVNEDDDDEPYSGSGKNGPAARQIIKRVVK 505
Query: 298 --QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---DQTLTNR------------ 340
VL+ +Y + + S + DE H+++N D T+ +
Sbjct: 506 HGHVLVTTYAGLHSYQDEL-LSYEWGYAVLDEGHKIRNPNADITIACKKLNTPHRLILSG 564
Query: 341 ----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
N+L E +++ +F P LG FR+ +E I G AT + ++ L
Sbjct: 565 TPIQNNLVELWSLFDFIYPMRLGTLVSFRQQFEMPIRMGGHANATNLAVLTAEKCATTLK 624
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK 456
+++++L+R +++ LP K +V+ CKLTP Q+E Y FIHS V + ++ K+ +
Sbjct: 625 EAISKYLLQRLKTDVASDLPEKTEQVLFCKLTPEQNEEYVRFIHSDAVSQIMA---KKRQ 681
Query: 457 ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
L I L+K+CNHP L+ + K G PG D
Sbjct: 682 ALYGIDILRKICNHPDLV-NVRKKGQPGY-------------------------DWGNPR 715
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC-RERRYPYLRLDGTTSISKR 575
S K+ + LL L +R + +L S LD+ + + YLR+DG ++ KR
Sbjct: 716 RSSKLQTVGELLP-LWKRFGHKTLLFSQTKIMLDILQEFIGKMEGMNYLRMDGEVAVEKR 774
Query: 576 QKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
Q L++ FN DPS + VFLL++K GG G+NL G R+V++DPDWNP+ D QA R WR G
Sbjct: 775 QALIDRFNHDPSIH--VFLLTTKTGGLGVNLTGATRIVIYDPDWNPSTDLQARERAWRLG 832
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
Q K V IYR +++GTIEEK+Y RQ+ K+ + KV++ + + NF DL DLF+
Sbjct: 833 QTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPK-----QRANF-DLSDLYDLFS 886
Query: 694 FHDDVRS 700
F D+ S
Sbjct: 887 FGDNSHS 893
>gi|357520033|ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
truncatula]
gi|355524327|gb|AET04781.1| DNA excision repair protein ERCC-6-like protein [Medicago
truncatula]
Length = 1129
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/597 (28%), Positives = 285/597 (47%), Gaps = 105/597 (17%)
Query: 163 EPQNDGGNLV-----PITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDM 217
EP+NDG + + P + + L PHQREG+++++ L+ G G IL DDM
Sbjct: 359 EPENDGSITLNDPRSTYKLQPKIAKMLYPHQREGLKWLWS-----LHVRG-KGGILGDDM 412
Query: 218 GLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
GLGKT+Q L L F + ++++ ++V P +L+ +W E+ ++ L E
Sbjct: 413 GLGKTMQICGFLAGL----FHSR-LIRRVLVVAPKTLLPHWIKEL--------SVVGLSE 459
Query: 278 STRDDVVSGIDSFTDPCSSLQ------------VLIVSYETFRMHSSKFSCSE------- 318
T++ + C+ L+ VL+ +Y+ R ++
Sbjct: 460 KTKE--------YFGACAKLREYELQYILQDKGVLLTTYDIVRNNTKSLKGHRYFDDEDN 511
Query: 319 ----SCDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNP 355
+ D +I DE H +KN T + N+L+E +A+ NF P
Sbjct: 512 EDGPTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCP 571
Query: 356 GILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH- 414
+LGD +F+ YET I+ G + A+ EK +G + EL + + LRR + + N
Sbjct: 572 DLLGDKKWFKDKYETPILKGNDKNASAREKCIGSSVAKELRDHIQPYFLRRLKSEVFNQD 631
Query: 415 -------LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKL 467
L K +V +LT +Q LY F+ S+ V A LA +T LKK+
Sbjct: 632 TEKTTAKLSQKREIIVWLRLTNVQRHLYEAFLKSEIVLSAFD-----GSPLAALTILKKI 686
Query: 468 CNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE-------LSGK 520
C+HP L+ T ++ G E ++ P E+ + D A + +S K
Sbjct: 687 CDHPLLL--TKRAAEDVLDGLESMLK--PEEVNVAEKLAMHIADVAETDKFEDKHDVSCK 742
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
+ + LL +L R+++ S + L+L + + Y +LR+DGTT R K+V+
Sbjct: 743 IVFIMSLLDNLIPEGH-RVLIFSQTRKMLNLIQECITSQGYDFLRIDGTTKSCDRIKIVD 801
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
F D +FLL+S+ GG GL L +R+++ DP WNP+ D Q+ R +R GQKK V
Sbjct: 802 DFQD-GVGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVI 860
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
+YR +++GT+EEK+Y++Q+ K GL K + +++ Q + S +DL++L + D
Sbjct: 861 VYRLMTSGTVEEKIYRKQVYKGGLFKTVSEQK-----EQTRYFSQKDLKELLSLPKD 912
>gi|403216874|emb|CCK71370.1| hypothetical protein KNAG_0G03130 [Kazachstania naganishii CBS
8797]
Length = 1047
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 269/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+IA L Y + +G P
Sbjct: 123 LRDYQIQGLNWLISLHENKLSG------ILADEMGLGKTLQTIAFLGYLRYVKNVEG-PF 175
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
++V P S + NW E KW V + L + +R ++++ + + VL
Sbjct: 176 ----LVVVPKSTLDNWRREFNKWTP-EVTAVVLQGDKESRGEIMNDVVM----EAKFDVL 226
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + +I DEAHR+KN+Q+ ++ N
Sbjct: 227 ITSYEMI-IREKNILKKFAWQYIIIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 285
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P + GD+ F ++ + TE+++++ ++ +L A +N
Sbjct: 286 NLHELWALLNFLLPDVFGDSEVFDEWFAEN--------NTEQDQEVLVQ---QLHAVLNP 334
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 335 FLLRRVKADVEKSLLPKIETNVYVGMTDMQVQWYKSLLERDIDAVNGAVGKREGKTRLLN 394
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + SG
Sbjct: 395 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNSG 429
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R Y R+DG+T+ +R + +
Sbjct: 430 KMIILDKLLKRLKEK-GSRVLIFSQMSRLLDILEDYCYFRDLEYCRIDGSTAHEERIEAI 488
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P ++FVFLL+++AGG G+NL+ + ++LFD DWNP D QA R R GQKK+V
Sbjct: 489 DDYNKPDSDKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 548
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ SA GN S +DL ++ F
Sbjct: 549 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGSGKKSANLGN--SKDDLIEMIQF 602
>gi|432134242|ref|NP_001076075.2| DNA excision repair protein ERCC-6-like 2 [Bos taurus]
Length = 1558
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 277/568 (48%), Gaps = 87/568 (15%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMF-ECVSGLLNAAGIHGCILADDMGLGKTLQ 224
++ G+ +P T++ R+LR +QREG QF++ + G GCIL DDMGLGKT+Q
Sbjct: 121 SENGDSIPYTIN----RYLRDYQREGAQFLYGHFIQG-------RGCILGDDMGLGKTVQ 169
Query: 225 SIALLYTLLCQG-------------------FDGKPMVKKA-IIVTPTSLVSNWEAEIKK 264
I+ L +L + D KK +IV P S++ NW+ E+
Sbjct: 170 VISFLAAVLGKKGTREDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDT 229
Query: 265 WVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLI 324
W G ++ L + +D + + ++ + +YET R+ + + E D+++
Sbjct: 230 W--GYFRVTILHGNKKDSELIRVKQ-----RKCEIALTTYETLRLCLDELNSLEWSDVIV 282
Query: 325 CDEAHRLKNDQT-LTN------------------RNDLEEFFAMVNFTNPGILGDAAYFR 365
E+HR+KN + LT +N+++E + ++++ P +L +F+
Sbjct: 283 Y-ESHRIKNPKARLTEIMKALRCNVRIGLTGTILQNNMKELWCVMDWAVPRLLRIMIHFK 341
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCC 425
+ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V C
Sbjct: 342 KQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYC 401
Query: 426 KLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYIT 462
LT Q +Y + +++V + ET ++ +YI
Sbjct: 402 ALTDFQKAVYQTVLQTEDVSLILQSSEPCTCNSGHKRRNCCYKTNSQGETVKTLYFSYIA 461
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELSGK 520
L+K+ NH L+ S T C + F P+ F +S G + + S K
Sbjct: 462 VLQKVANHVALVQTVSTSRQQETLIKRICDQVFSRFPD-FVQKSKDAAFGTLSDSKYSVK 520
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T +R K+V
Sbjct: 521 MKVLQQLLDHCR-KNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERIKIVK 579
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ + V
Sbjct: 580 EFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVK 638
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+ R +S GT+EE +Y RQ+ K+ L V+
Sbjct: 639 VLRLISLGTVEEIMYLRQVYKQQLHCVV 666
>gi|340376710|ref|XP_003386875.1| PREDICTED: DNA repair protein rhp26-like [Amphimedon queenslandica]
Length = 1230
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 261/551 (47%), Gaps = 76/551 (13%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G VP ++ L R+ Q+ GV++++E S A GI G D+MGLGKT++ I
Sbjct: 346 GFRVPSSIWHKLYRY----QQTGVKWLWELHSQ--QAGGIMG----DEMGLGKTIEMIGF 395
Query: 229 LYTLLCQGFDGKPM----VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVV 284
L L + ++V P +++ W E W +A+ T
Sbjct: 396 LAGLKISNVRSHVTRELGLGPILVVCPATVLHQWVHEFHSWYPPF--RVAILHDTGSYGG 453
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---DQTLTNR- 340
S S+ V++ +Y + R+ + + +I DE H+++N D TL +
Sbjct: 454 SKASLLKRMVSANGVIVTTYASVRLQTDLL-LRHQWEYVILDEGHKIRNPDADITLACKQ 512
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
N+L+E +++ +F PG LG F + I G A++ +
Sbjct: 513 FPTPHRIILSGSPVQNNLKELWSLFDFVYPGKLGTLPVFLEQFSVPITLGGYAHASQTQV 572
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
+ + L +N ++LRR + + LP K +V+ C+LT Q ELY +I V+
Sbjct: 573 ETAYRCACILRDTINPYLLRRLKSDVKLQLPNKNEQVLFCRLTDYQRELYEEYIKGPEVE 632
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG 505
A+ KQ I + + L+KLCNHP L+ ++ + GF
Sbjct: 633 -AMMRGGKQ--IFSGLMTLRKLCNHPDLVAGGVRDSEEESYGF----------------- 672
Query: 506 SWTGGDGAWVELSGKMHVLARLLGH-LRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
W SGKM V+ LL L Q+ +I+L S Q L + + Y YL
Sbjct: 673 --------W-RRSGKMIVIESLLKMWLGQK--HKILLFSQSRQMLYILEKFLISNSYTYL 721
Query: 565 RLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
R+DGTTSI RQKL+ FN DPS FVFLL+++ GG G+NL G +R++++DPDWNP+ D
Sbjct: 722 RMDGTTSIGARQKLIKDFNEDPSI--FVFLLTTRVGGLGVNLTGADRVLIYDPDWNPSTD 779
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFL 683
QA R WR GQ K V IYR L+ GTIEEKVY RQ+ K+ L + ++ Q F
Sbjct: 780 TQARERAWRIGQTKPVTIYRLLTGGTIEEKVYHRQIFKQFLTNRVLRD-----PRQRRFF 834
Query: 684 STEDLRDLFTF 694
+ DL +LFT
Sbjct: 835 KSNDLYELFTL 845
>gi|432905593|ref|XP_004077453.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias latipes]
Length = 1424
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 266/554 (48%), Gaps = 75/554 (13%)
Query: 176 VDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
V L + L +Q+ GV++M+E C G IL D+MGLGKT+Q I+ L L
Sbjct: 490 VPGFLWKKLYKYQQTGVRWMWELHCQQA--------GGILGDEMGLGKTIQVISFLAGLS 541
Query: 234 CQGFDGK------PMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---ALCESTRDDV 283
+ + +IV P +++ W E W RV ++ S ++ +
Sbjct: 542 YSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSKKEKL 601
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN---- 339
+ I S C +LI SY R + +I DE H+++N
Sbjct: 602 IPEIAS----CHG--ILITSYSAVR-NLQDILIRYDWHYIILDEGHKIRNPNAAVTAACK 654
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+N+L+E +++ +F PG LG F + I G A+ +
Sbjct: 655 QFQTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ 714
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSELYNHFIHSK 442
+ + + L +N ++LRR A + +L P K +V+ C+LT Q ++Y F+ SK
Sbjct: 715 VQTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSK 774
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
V + ++ + + + + + AL+K+CNHP L SG P ++ P + +
Sbjct: 775 EVYQILNGDMQ---VFSGLIALRKICNHPDLF-----SGGP------RMLKGIPEDQLTE 820
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
G W SGK+ V+ LL L + R++L S Q LD+ RE Y
Sbjct: 821 EEHF-----GFW-RRSGKLIVVESLL-RLWFKQGHRVLLFSQSRQMLDILEVFVRENNYS 873
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
YL++DGTT+I+ RQ L+ +N ++ F+FLL++K GG G+NL G NR++++DPDWNP+
Sbjct: 874 YLKMDGTTTIASRQPLIARYNQ-DRSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPST 932
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R WR GQ +V IYR L+ GTIEEK+Y RQ+ K+ L + ++ Q F
Sbjct: 933 DTQARERAWRIGQTLQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRF 987
Query: 683 LSTEDLRDLFTFHD 696
+ D+ +LFT D
Sbjct: 988 FKSNDIYELFTLAD 1001
>gi|402072696|gb|EJT68413.1| DNA repair and recombination protein RAD26, partial [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1071
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 295/646 (45%), Gaps = 111/646 (17%)
Query: 96 NGYDNGNDQLARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDP 155
+G D+GN+ + R KR W R V++ I+E F P
Sbjct: 297 SGIDDGNEGVYR-----KRLSTWVERRRNARLRRQIARGEEAVDDKSIDEWFKPSPD--- 348
Query: 156 LVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILAD 215
QP+ + D G +P + P L + Q+ GV+++ E N GI G D
Sbjct: 349 ----QPDH-EFDNGLKLPGDIYPALFDY----QKTGVRWLSELFEQ--NVGGIVG----D 393
Query: 216 DMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIA 274
+MGLGKT+Q I+ + L + + + I+V P +L+ W E +W RV ++
Sbjct: 394 EMGLGKTVQLISFVAALHY----SQKLTRPVIVVAPATLLRQWVNEFHRWWPPLRVSILH 449
Query: 275 LCESTRDDVVSGIDSFTDPCSSL-------------------------QVLIVSYETFRM 309
S DV S D SS VL+ +Y +
Sbjct: 450 SSGSGMLDVRSEGRLEDDELSSSDEEAPKKKRGAKAAKKIVDRVVKDGHVLVTTYAGLQA 509
Query: 310 HSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---------NDLEEFFAMV 350
+ E D + DE H+++N T NR N+L E +++
Sbjct: 510 YGGILIPVE-WDYAVLDEGHKIRNPNTALTVYCKELRTANRVILSGTPIQNNLVELWSLF 568
Query: 351 NFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNAL 410
+F P LG FR E I G AT + + + L ++ ++L+R A
Sbjct: 569 DFIYPMRLGTLHEFRNNIEIPIRLGGYANATNLQIMTAQKCAETLKDAISPYLLQRVKAD 628
Query: 411 LSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNH 470
++ LP K +V+ C+LT +Q Y F+ SK + + ++ K I L+K+CNH
Sbjct: 629 VAADLPKKSEQVLFCRLTQIQRSAYEQFLSSKEMDQILNGTRKS---FFGIDQLRKVCNH 685
Query: 471 PKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGH 530
P L+ +++ G+P S R GS SGKM V+ LL H
Sbjct: 686 PDLLDPSVR-GDP-----------------SYRWGS--------ASKSGKMQVVKALL-H 718
Query: 531 LRQRTDDRIVLVSNYTQTLDLFAQLCRERR-YPYLRLDGTTSISKRQKLVNHFNDPSKNE 589
+ +R + +L S TQ LD+ R + YLR+DG T I RQ LV+ FN+ + +
Sbjct: 719 MWKRFGHKTLLFSQGTQMLDILEAFVRRQDGIRYLRMDGRTPIKDRQTLVDQFNNTPELD 778
Query: 590 FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGT 649
+FLL++K GG G+NL G +R+++FDPDWNP+ D QA R WR GQKK V IYR ++ GT
Sbjct: 779 -IFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDVQARERAWRLGQKKEVTIYRLMTAGT 837
Query: 650 IEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
IEEK+YQRQ+ K+ L KV++ D S G F + +DL +LFT
Sbjct: 838 IEEKIYQRQIFKQFLTNKVLK----DPSQRNG-FATMQDLHNLFTL 878
>gi|301114327|ref|XP_002998933.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
gi|262111027|gb|EEY69079.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
Length = 1052
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 183/650 (28%), Positives = 293/650 (45%), Gaps = 99/650 (15%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
+ V ++ L PHQRE ++++ + L+ G+ G IL DDMGLGKT+Q + L +L
Sbjct: 216 LLVSSFVLTQLLPHQRECLEWLHK-----LHERGV-GGILGDDMGLGKTVQLASFLGSL- 268
Query: 234 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV-GGRVQLI---------ALCESTRDDV 283
++ +++ P S++ W E+ KW RV L+ + + +
Sbjct: 269 ----HAARRLRTVLLLCPASVLLQWVRELHKWAPWMRVVLLHASGTGVSASSSSECYEQL 324
Query: 284 VSGIDSFT--------------DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAH 329
+ + F D + V+I +YE R + S F E D ++ DE H
Sbjct: 325 IEDVFRFDDDEEEDVGDPGLRQDSPTGGGVVISTYENVRQYQSLFLTRE-WDYVVLDEGH 383
Query: 330 RLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYET 370
R++N T +N L E +++ +F PG LG F +
Sbjct: 384 RIRNPDAETTLVCKQLRTVHRIILSGTPIQNRLRELWSLFDFVYPGRLGTLPTFDDEFVL 443
Query: 371 SIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALL------SNHLPPKIIEVVC 424
I G TAT+ + + + + L + F+LRRT + S+ LP K +++
Sbjct: 444 PIRAGGYATATKMQVLMAYKCALALKDLIQPFLLRRTKQEVMATDANSSMLPGKQEQILF 503
Query: 425 CKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI---------- 474
C+LT Q LY F+ S V + + + + I+ L+ +CNHP L+
Sbjct: 504 CRLTQRQRALYKRFLASPEVASVLRRDLRPFRA---ISVLRHICNHPDLLATFGDGGLAD 560
Query: 475 ------YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLL 528
+ + G GF + + G S G A SGKM VL ++L
Sbjct: 561 KKRQSYFKEEEEEEEGEEGFTNVAGLLDEDKEEGESDEPFGAASA----SGKMIVLQKVL 616
Query: 529 GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
L + R+++ + LD+ + RLDGTT +++RQ+ ++ FN P N
Sbjct: 617 -TLWKEQKHRVLVFTQTRSMLDILESFMSRLGHACTRLDGTTGVAERQQRLDAFNAPDSN 675
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
F FLL+++AGG G+NL+G +R+V+FDPDWNP+ D QA R WR GQ+K V +YR ++ G
Sbjct: 676 LFAFLLTTRAGGIGVNLVGADRVVVFDPDWNPSTDVQARERAWRIGQQKPVTVYRLVTAG 735
Query: 649 TIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE--IHENM 706
TIEEK+Y RQ+ K+ L + + A + + LRDLF D+ E + E
Sbjct: 736 TIEEKIYHRQIFKQYLTSKVLHD-----AKRKRCFNKHSLRDLFVLADEKEGEDGVAETT 790
Query: 707 HCTRCQNYD------DGAES-IGEGDETNSANKNDQSDQEVTDIGGFAGL 749
N D DG E GE ++ ND +++ D G G+
Sbjct: 791 ELFVAGNVDRPAGLEDGEEGDAGEDSRNDADGDNDAVLKQLFDGGDVRGV 840
>gi|363748610|ref|XP_003644523.1| hypothetical protein Ecym_1481 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888155|gb|AET37706.1| hypothetical protein Ecym_1481 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1034
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 274/558 (49%), Gaps = 82/558 (14%)
Query: 165 QNDGGNLVPITV---DPLLVRF--LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGL 219
Q++ G L TV P V+ LR +Q G+ ++ L+ ILAD+MGL
Sbjct: 105 QDEEGRLSETTVLTESPNYVKAGKLREYQIYGLNWLISLHENKLSG------ILADEMGL 158
Query: 220 GKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCES 278
GKTLQ+I+ L Y + DG P I+V P S + NW+ E KW LI +
Sbjct: 159 GKTLQTISFLGYLKFIKNIDG-PF----IVVVPKSTLDNWKREFSKWTPDVRTLI--LQG 211
Query: 279 TRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-TL 337
++ ++ C VLI SYE + + ++ DEAHR+KN+Q TL
Sbjct: 212 DKETRAKLLEDRILSCD-FDVLITSYEMVIKEKAALK-KFAWQYIVIDEAHRIKNEQSTL 269
Query: 338 TN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
+ +N+L E +A++NF P + G++ F +++ +
Sbjct: 270 SQIIRLFYSKGRLLITGTPLQNNLHELWALLNFLLPDVFGESEVFDEWFQQN-------- 321
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
++++++ ++ +L A + F+LRR A + L PKI V + +Q + Y +
Sbjct: 322 DKDQDQEVVVQ---QLHAVLQPFLLRRVKAEVEKSLLPKIETNVYVGMAGMQLQWYKSLL 378
Query: 440 HSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP 497
V A+++ ++++L + L+K CNHP L ++ + G P TT
Sbjct: 379 EKDIDAVNGAVAKREGKTRLLNIVMQLRKCCNHPYL-FEGAEPGPPFTT----------- 426
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
D + SGKM VL +LL +Q R+++ S ++ LD+ C
Sbjct: 427 -------------DEHLIYNSGKMIVLDKLLKR-KQMEGSRVLIFSQMSRLLDILEDYCY 472
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R Y Y R+DG+TS +R + ++ FN P N+F+FLL+++AGG G+NL+ + +VL+D D
Sbjct: 473 FREYEYCRMDGSTSHEERIQAIDDFNAPDSNKFIFLLTTRAGGLGINLVTADTVVLYDSD 532
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSS 676
WNP D QA R R GQKK+V +YRF++ IEEKV +R K L Q VIQQ S
Sbjct: 533 WNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKS 592
Query: 677 ATQGNFLSTEDLRDLFTF 694
A GN S ++L D+ F
Sbjct: 593 ANLGN--SKDELIDMIQF 608
>gi|406861398|gb|EKD14452.1| hypothetical protein MBM_07173 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1056
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 182/644 (28%), Positives = 292/644 (45%), Gaps = 110/644 (17%)
Query: 125 LVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFL 184
L + R D P T+E + ++ LP ++P ++ ++L
Sbjct: 188 LAELAERPDFPDTMETSREYKDIELP----------------HSAGVIPASI----AQYL 227
Query: 185 RPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG----- 239
R +Q GV F+ E G IL DDMGLGKT+Q A L + D
Sbjct: 228 RDYQVTGVGFLHELF------VYQKGGILGDDMGLGKTVQVAAFLTVAFGKTGDERDAKR 281
Query: 240 ---------KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
KP +A+IV P SL+ NW+ E+ +W + + + V S
Sbjct: 282 MRKMRRSPCKPWYPRALIVCPGSLMENWKNELTRWGWWHADIFHGSVAAKKAVHEAAKS- 340
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR---------- 340
L+V+I +Y T+R H + + D+++ DE H+LK + T +
Sbjct: 341 ----GRLEVVITTYNTYRNHMDELN-QIKWDVVVADECHQLKEPSSATTQAMDQINALCR 395
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
N EEF+ ++N+TNPG G + ++ + G+ AT + K G +
Sbjct: 396 IGLTGTAIQNKYEEFWTLLNWTNPGKFGPLSTWKTSISDPLRIGQSHDATNHQLKQGRQI 455
Query: 392 SSELSAKV-NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAI 448
+ +L + QF LRR +L+++ LP K +VV C LT LQ E Y F+ S+ ++ R
Sbjct: 456 AEKLRDNLLPQFFLRRMKSLIAHQLPKKTDKVVFCPLTNLQKEAYERFLDSEVVDIVRTS 515
Query: 449 SEE-----------------------TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGT 485
SE+ T ++ + I L+KL NH ++ K
Sbjct: 516 SEDCDCGETGKKRGWCCFSTLPGTNTTWKAMVFPIINQLQKLSNHLAILLPNDKDPPEKR 575
Query: 486 TGFEDCIRFFPPE----MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
D +R P+ +++ R T + E GK +L +LL H ++ D ++++
Sbjct: 576 NRDLDMLRDMLPDHWDTLYANRGNLATLSNP---EFCGKWVILKKLLKHWHEQGD-KVLI 631
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGG 600
S+ + L + L Y L+G+ +RQK V+ FN DP N+FVFL+S+KAGG
Sbjct: 632 FSHSVKLLRMLQHLFNNTAYSVSFLNGSMPNDQRQKTVDDFNTDP--NQFVFLISTKAGG 689
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
GLN+ N++V+FDP+WNP+ D QA R +R GQ + V +YR +S GT+EE VY RQ+
Sbjct: 690 VGLNITSANKVVIFDPNWNPSYDLQAQDRAYRIGQLRDVEVYRLVSAGTVEEIVYARQIY 749
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTED-------LRDLFTFHDD 697
K+ + T+ +G + +D L +LF +H D
Sbjct: 750 KQQQANIGYTASTERRYFKG-VQNNKDQKGEIFGLDNLFAYHAD 792
>gi|384497021|gb|EIE87512.1| hypothetical protein RO3G_12223 [Rhizopus delemar RA 99-880]
Length = 778
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 180/599 (30%), Positives = 272/599 (45%), Gaps = 123/599 (20%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DGG VP + L + Q+ VQ+++E L+ + G IL D+MGLGKT+Q I
Sbjct: 28 DGGLRVPGELWSCLFDY----QKTCVQWLWE-----LHRQEV-GGILGDEMGLGKTIQII 77
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
A L +L G + +++V P +++ W E KW Q IA+ S+ + +G
Sbjct: 78 AFLSSLYYSNVLGPG--QASVVVCPATVMKQWVQEFHKWWPP--QRIAILHSSGSGIKTG 133
Query: 287 IDSFT--------------------------------DPCSSL----------------- 297
+ T P SL
Sbjct: 134 NYTSTDDEESDEEMEEVEEEYEPDRRGGQAKRRKGKRHPARSLLGTKAGKRVSALVDKYI 193
Query: 298 ---QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------------- 339
VLI +Y + + +I DE H+++N + T
Sbjct: 194 KLGGVLITTYSGVQTYREVL-LKHRWGYVILDEGHKIRNPDSETTLAIKQFKSPHRIILS 252
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+N+L+E +++ +F PG LG F+ + I G AT + + + + L
Sbjct: 253 GTPIQNNLKELWSLFDFVFPGRLGTLPIFQSQFSVPISIGGYANATNIQVQTAYKCACML 312
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
+N ++LRR ++ LP K +V+ CKLT Q Y FI SK + AI E +Q
Sbjct: 313 RDLINPYLLRRMKVDVAADLPKKNEQVLFCKLTKPQRRAYLQFIQSKEMD-AILERRRQ- 370
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
+L I ++K+CNHP L+ + NP D
Sbjct: 371 -VLYGIDIVRKICNHPDLVNLAMTDRNP---------------------------DYGNS 402
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
+ SGKM V+ LL L + R++L Q LD+ ++ R++ Y Y+R+DGTT I +R
Sbjct: 403 DRSGKMVVVKALL-KLWKAQKHRVLLFCQTRQMLDIIERMIRDQEYRYMRMDGTTPIHQR 461
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
+VN +ND +K+ FVFLL++K GG GLNL G +R++LFDPDWNP+ D QA R WR GQ
Sbjct: 462 IAMVNEYND-NKHLFVFLLTTKVGGLGLNLTGADRVILFDPDWNPSTDVQARERAWRLGQ 520
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
K V IYR +++GTIEEK+Y RQ+ K+ L I ++ Q F +L+ LFT
Sbjct: 521 TKDVTIYRLMTSGTIEEKIYHRQIYKQFLTNKILKD-----PKQKRFFDASNLQSLFTL 574
>gi|254584336|ref|XP_002497736.1| ZYRO0F12320p [Zygosaccharomyces rouxii]
gi|238940629|emb|CAR28803.1| ZYRO0F12320p [Zygosaccharomyces rouxii]
Length = 983
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 288/578 (49%), Gaps = 83/578 (14%)
Query: 174 ITVDPLLVRF--LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-Y 230
+T P ++ LR +Q +G+ ++ L+ + G ILAD+MGLGKTLQ+I+ L +
Sbjct: 54 VTETPWYIKHGKLRDYQIQGLNWLIS-----LHEHKLSG-ILADEMGLGKTLQTISFLGH 107
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
+G +G P +I+ P S + NW E ++W V ++ L +D+ +
Sbjct: 108 QRYVKGIEG-PF----LIIVPKSTLDNWRREFERWTP-EVDVLVL-HGDKDERRELLQER 160
Query: 291 TDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-TLTN---------- 339
+ VLI SYE S + L+ DEAHR+KN+Q TL+
Sbjct: 161 V-LEAKFDVLISSYEMVIKEKSTLKRV-AWQYLVIDEAHRIKNEQSTLSQIIRLFYSRNR 218
Query: 340 --------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
+N+L E +A++NF P + GDA F ++E + +E++++ I+
Sbjct: 219 LLITGTPLQNNLHELWALLNFLLPDVFGDAEVFDDWFEQN--------NSEQDQETVIQ- 269
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAIS 449
+L ++ F+LRR A + L PKI + +T +Q Y + V +
Sbjct: 270 --QLHTVLSPFLLRRVKADVEKSLLPKIETNLYVGMTEMQVHWYKSLLEKDIDAVNGVVG 327
Query: 450 EETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
+ ++++L + L+K CNHP L ++ + G P TT
Sbjct: 328 KREGKTRLLNIVMQLRKCCNHPYL-FEGAEPGPPYTT----------------------- 363
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
D V +GKM VL +LL ++++ R+++ S ++ LD+ C R Y Y R+DG+
Sbjct: 364 -DEHLVYNAGKMIVLDKLLKKMKEKGS-RVLIFSQMSRLLDILEDYCYFRDYEYCRIDGS 421
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
T+ R + ++ FN P ++FVFLL+++AGG G+NL+ + +VL+D DWNP D QA R
Sbjct: 422 TAHEDRIEAIDEFNKPDSDKFVFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDR 481
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDL 688
R GQKK+V +YRF++ IEEKV +R K L Q VIQQ+ + +A GN S +DL
Sbjct: 482 AHRIGQKKQVHVYRFVTESAIEEKVIERAAQKLRLDQLVIQQDSSKKTANLGN--SKDDL 539
Query: 689 RDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDE 726
D+ F ++ E T N DD E + +GD+
Sbjct: 540 LDMIQFG---AKDVFEKKSNTISVN-DDIDEILAKGDQ 573
>gi|302814766|ref|XP_002989066.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
gi|300143167|gb|EFJ09860.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
Length = 1043
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 177/618 (28%), Positives = 280/618 (45%), Gaps = 103/618 (16%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+GG +P+ + L + Q+ GV++++E S L GI G D+MGLGKT+Q I
Sbjct: 283 EGGLRIPLDIYDRLFDY----QKTGVKWLWELHS--LKTGGIIG----DEMGLGKTVQVI 332
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALC--------- 276
A L L M +I+V P +L W+ E++KW VQ++
Sbjct: 333 AFLAAL-----HHSRMYSPSIVVCPVTLTFQWKREVEKWYPKFDVQVVHESAAPKGKKKE 387
Query: 277 ------------ESTRDDVVSGIDSFTDPC--SSLQVLIVSYETFRMHSSKFSCSESCDL 322
++ RD ++ D + S +++ +YE R+
Sbjct: 388 AEDSDASGDDSGDAKRDARLARWDGVVEKTVRSPSGLIVTTYEQLRLLKDTL-LDIDWGY 446
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+ DE HR++N T +N L E +++ +F PG LG
Sbjct: 447 AVLDEGHRIRNPDAETTLICKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPV 506
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F+ + I G AT + + + L + +ILRR + + L K V+
Sbjct: 507 FQAQFALPISIGGYANATSLQVSTAYKCAVTLRDLIMPYILRRMKSDVEAKLTKKTEHVL 566
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C LT Q Y F+ S +V+R I E +K + L I L+K+CNHP L+
Sbjct: 567 FCSLTETQRACYRAFLASSDVER-IFEGSKNA--LYGIDILRKICNHPDLLE-------- 615
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
R S D + SGK+ V++++L + + R+++
Sbjct: 616 -------------------REASEKHADYGLPDRSGKLMVVSQVLNSWKDQ-GHRVLVFC 655
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
Q LD+ + Y Y R+DG+TS+ +R L++ FN+ S + FVFLL++K GG G
Sbjct: 656 QTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPALIDEFNE-SSHVFVFLLTTKVGGLGT 714
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NL G NR+++FDPDWNP+ D QA R WR GQ K V +YR ++ GTIEEKVY RQ+ K+
Sbjct: 715 NLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDVIVYRLITRGTIEEKVYHRQIYKQF 774
Query: 664 L-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHC-----TRCQNYDDG 717
L K+++ Q Q ++D+RDLF H+D + E + DG
Sbjct: 775 LTNKILRDPQ------QRRVFKSKDMRDLFVLHEDAEGDKTETSNLFPELKLPAAAESDG 828
Query: 718 AESIGEGDETNSANKNDQ 735
E+ G+E + +++Q
Sbjct: 829 KEAAHGGEEGDQITRDEQ 846
>gi|360044828|emb|CCD82376.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1393
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 180/611 (29%), Positives = 293/611 (47%), Gaps = 76/611 (12%)
Query: 134 LPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQ 193
L R ++EE F V P + + DGG VP ++ L + QR+GV+
Sbjct: 234 LRRQRRTELLEEQFAREHEVHSS---NPSDGKLDGGFCVPGSIWSRLFDY----QRKGVK 286
Query: 194 FMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM-VKKAIIVTPT 252
++++ L+ G G I+ D+MGLGKT+Q IALL L + + + +IV P
Sbjct: 287 WLWD-----LHQKGC-GGIIGDEMGLGKTIQIIALLAGLHYSNIEDRSYRLGPTLIVCPA 340
Query: 253 SLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHS 311
++++ W +E W RV ++ S + T+ S VL+ +Y T +
Sbjct: 341 TVLNQWMSEFHSWWPPIRVAILHSTGSGYGKPNKLMQMITNNPGS--VLLTTYSTLVTYR 398
Query: 312 SKFSCSESCDLLICDEAHRLKN---DQTLTNR----------------NDLEEFFAMVNF 352
+ S + +I DE H++KN + TL + N+L E +++ +F
Sbjct: 399 DMLT-SRNWSYVILDEGHKIKNPEAEATLAVKHFSTPHRLILSGSPIQNNLRELWSLFDF 457
Query: 353 TNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLS 412
PG LG F + + I G A+ + + + + L + +++RR A +
Sbjct: 458 VCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCACTLRNLLKPYLIRRLKADVQ 517
Query: 413 NHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPK 472
LP K +V+ C+LT Q +LY ++ S+ K ++ + I + L+ LCNHP
Sbjct: 518 IQLPAKSEQVLFCRLTDYQQKLYREYLESQVCKDLLN---GKGNIFPSLILLRNLCNHPD 574
Query: 473 LIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSG------SWTGGDGAWVELSGKMHVLAR 526
L +G P + C F E S + G S++ S KM V+A
Sbjct: 575 L-----ATGGPR----DSC--FLNEEFESDKQGIENVCLSYSWSRFGCPRRSSKMLVVAS 623
Query: 527 LLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS 586
LL + + +++L S + L L +L + ++ YLR+DGTT +S+R +L+ FN S
Sbjct: 624 LLKNWYDQ-GHKVLLFSQSRRMLTLLERLVQLMKFSYLRMDGTTPVSQRHELIRRFNYRS 682
Query: 587 KNE-------------FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
++ F+FLL+++ GG G+NL NR++++DPDWNP D QA R WR
Sbjct: 683 TSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVLIYDPDWNPTTDLQARERAWRI 742
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFT 693
GQ + V IYR L++GTIEEK+Y RQ+ K+ L I + + Q F T DL++L T
Sbjct: 743 GQSRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRILK-----NPRQQRFFKTNDLQELLT 797
Query: 694 FHDDVRSEIHE 704
F D+ +I E
Sbjct: 798 FEDESDIQIPE 808
>gi|224085664|ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222857105|gb|EEE94652.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1206
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 261/572 (45%), Gaps = 116/572 (20%)
Query: 187 HQREGVQFMFE--CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVK 244
+Q+ GVQ+++E C G I+ D+MGLGKT+Q ++ L L M K
Sbjct: 394 YQKVGVQWLWELHCQRA--------GGIIGDEMGLGKTIQVLSFLGALHFSN-----MYK 440
Query: 245 KAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID--------SFTDPC-- 294
+I+V P +L+ W+ E +KW R + L +S +D VS D S+ C
Sbjct: 441 PSIVVCPVTLLRQWKREAQKWYP-RFHVELLHDSAQD--VSCRDPLKKKRAQSYESDCET 497
Query: 295 -----------------------------SSLQVLIVSYETFRMHSSKFSCSESCDLLIC 325
S +LI +YE R+ K E +
Sbjct: 498 EDSLDSDYEGSISCRKANKWDSLINRVFESDSGLLITTYEQLRLLGEKLLDFE-WGYAVL 556
Query: 326 DEAHRLKND-----------QTLTN--------RNDLEEFFAMVNFTNPGILGDAAYFRR 366
DE HR++N QT+ +N L E +++ +F PG LG F
Sbjct: 557 DEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVMPVFEA 616
Query: 367 YYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCK 426
+ I G A+ + + L + ++LRR ++ HLP K V+ C
Sbjct: 617 EFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKMDVNAHLPKKTEHVLFCS 676
Query: 427 LTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
LT Q +Y F+ S V+ I + ++ S L I ++K+CNHP L+
Sbjct: 677 LTSEQRSVYRAFLASTEVEN-ILDGSRNS--LYGIDVMRKICNHPDLLE----------- 722
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
R S+ D E SGKM V+A++L + Q R++L +
Sbjct: 723 ----------------REHSYHNPDYGNPERSGKMKVVAQVL-KVWQEQGHRVLLFTQTQ 765
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
Q LD+F Y Y R+DG+T I R +++ FN+ S + F+F+L++K GG G NL
Sbjct: 766 QMLDIFENFLNSGGYNYRRMDGSTPIKLRMSIIDEFNN-SGDIFIFILTTKVGGLGTNLT 824
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-Q 665
G NR+++FDPDWNP+ D QA R WR GQKK V +YR ++ GTIEEKVY RQ+ K L
Sbjct: 825 GANRVIIFDPDWNPSTDMQARERAWRIGQKKDVTVYRLITGGTIEEKVYHRQIYKHFLTN 884
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
K+++ Q Q F D++DLFT +DD
Sbjct: 885 KILKNPQ------QRRFFRARDMKDLFTLNDD 910
>gi|340712112|ref|XP_003394608.1| PREDICTED: DNA excision repair protein ERCC-6-like [Bombus
terrestris]
Length = 1161
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 256/512 (50%), Gaps = 64/512 (12%)
Query: 221 KTLQSIALLYTLLCQGF--DGKPM--VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIAL 275
KT+Q IA L L C DG + IIV P +L+ W +W RV ++
Sbjct: 359 KTVQVIAFLAGLDCSELLSDGGRFRGLGPTIIVCPATLMEQWVKHFHEWWPILRVAVLHQ 418
Query: 276 CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
C + ++ S VLI SY +H + S+ +I DE H+++N Q
Sbjct: 419 CGTYN----GNLEYLMHSLKSGGVLITSYSGMLIHKNLLVTSQ-WHYVILDEGHKIRNPQ 473
Query: 336 TLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
++ N L+E +++ +F PG LG F + T I G
Sbjct: 474 AKISKAVKEFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCATPITRGG 533
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSEL 434
A+ ++ + ++ ++ L + ++LRRT + +HL P K +V+ C LT Q EL
Sbjct: 534 YTNASPLQEAIALQVATMLRDTITPYMLRRTKNDVQHHLSLPEKNEQVLFCSLTEEQKEL 593
Query: 435 YNHFIHSKNVKRAISEETK------QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
Y ++ S +V + E++ ++++L ++ L+K+CNHP L T NP +
Sbjct: 594 YKEYLRSADVSFILHEKSNSVSRRYRARLLIALSVLRKICNHPDLFLYT----NPVDSDE 649
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
+ + E F G W + SGKM ++ R L + ++ R++L + Q
Sbjct: 650 DIDVSNEALEKF-----------GYW-KRSGKM-IVVRSLLKIWKKQGHRVLLFTQGRQM 696
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIG 607
+ + L + Y YLR+DG TS+S+RQ+ + FN DPS FVFLL+++ GG G+NL G
Sbjct: 697 MHVLESLVQSEEYSYLRMDGITSMSQRQETIRLFNKDPSY--FVFLLTTRVGGLGVNLTG 754
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QK 666
NR+V++DPDWNPA D QA AR WR GQ K+V IYR ++ GTIEEK+Y RQ+ K L K
Sbjct: 755 ANRVVIYDPDWNPATDAQARARAWRIGQNKKVTIYRLITAGTIEEKMYHRQIFKILLANK 814
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV 698
V++ + Q T DL +LF F++ +
Sbjct: 815 VLEDPR------QHRLFKTSDLVELFNFNESI 840
>gi|432873723|ref|XP_004072358.1| PREDICTED: uncharacterized protein LOC101165812 [Oryzias latipes]
Length = 1476
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 278/571 (48%), Gaps = 95/571 (16%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP T++ R+LR +QREG++F+++ N GCIL DDMGLGKT+Q I L
Sbjct: 128 VPFTIN----RYLRDYQREGIKFIYK------NYIRSSGCILGDDMGLGKTVQVIGFLAA 177
Query: 232 LLCQGF------DGKPMV-------------KKAIIVTPTSLVSNWEAEIKKWVGGRVQL 272
+L + + +P+ K ++V P S++ NW+ E+ W G
Sbjct: 178 VLHKTGTWEDVENNRPLFLQSQIPSKESNSNKVFLVVAPLSVLYNWKDELDTW--GYFHC 235
Query: 273 IALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLK 332
+ + +++ ++ I + +++ + +YET R+ +F+ + + DEAH++K
Sbjct: 236 VVVHGLRKEEELTRISN-----GRIEIALTTYETLRLCLDQFNMINWSAVFV-DEAHKIK 289
Query: 333 NDQT----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N + LT +N+LEE + ++++ PG LG+ +F+ + +
Sbjct: 290 NPNSQITQAMKGLRCKVRIGLTGTILQNNLEELWCVMDWAVPGCLGNLGHFKNKFSDPVE 349
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
G+ +AT+ G + L K++ + LRRT AL+ LP K VV C LT Q
Sbjct: 350 QGQRHSATKRALATGRKTVRALVKKISPWFLRRTKALIEEQLPKKDDRVVYCSLTDFQQA 409
Query: 434 LYNHFIHSKNVKRAI---------------------SEETKQSKIL--AYITALKKLCNH 470
+Y + +++V + + E Q K L +Y+ L+K+ NH
Sbjct: 410 VYQAVLDTEDVTLLLRSSDKCECQSGRTRRSCCYKKNSEGAQIKELYFSYLAILRKVANH 469
Query: 471 PKLIYDTIKSGNPGTTGFED------CIRFFP--PEMFSGRSGSWTGGDGAWVELSGKMH 522
L+ T PGT+ ++ C + FP P+ F R + + SGKM
Sbjct: 470 AALLQFT-----PGTSKKQEKYVSSICAKVFPNFPD-FVQRCRNEAFEALSDPTYSGKMK 523
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL + Q+ ++++ S T+ LD+ C Y RLDGTT R ++V F
Sbjct: 524 VLQKLLKYYLQKRS-KMLIFSLSTKLLDVLESYCMAEGLDYSRLDGTTKSKDRVQIVKDF 582
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N S L+S+ AGG GLN +G N +VLFDP WNPAND QA R +R GQ + V +
Sbjct: 583 NSSSHVNLC-LVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVTVL 641
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT 673
R +S GT+EE +Y RQ+ K+ LQ + EQ+
Sbjct: 642 RLISLGTVEEIIYLRQVYKQQLQCSVVGEQS 672
>gi|451847747|gb|EMD61054.1| hypothetical protein COCSADRAFT_124441 [Cochliobolus sativus
ND90Pr]
Length = 1221
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 178/618 (28%), Positives = 290/618 (46%), Gaps = 108/618 (17%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DGG +P + P L + Q+ GVQ+++E S + G I+ D+MGLGKT+Q++
Sbjct: 386 DGGFRIPGDIYPALFDY----QKTGVQWLWELYSQNV------GGIIGDEMGLGKTIQAV 435
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI-----ALCESTR 280
+ + L KP+ I+V P +++ W E +W RV ++ + ++ R
Sbjct: 436 SFVAGLHYSRLLTKPV----IVVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRR 491
Query: 281 DDVVS---GIDSFTDPCSSL------------------QVLIVSYETFRMHSSKFSCSES 319
+D + + ++ D ++L VL+ +Y + ++ +F
Sbjct: 492 EDRIEREMELRNYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYA-EFLIPTE 550
Query: 320 CDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGD 360
+ I DE H+++N T +N+L E +++ +F P LG
Sbjct: 551 WECAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGT 610
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
FR +E I G A+ E + + + L V+ ++L+R A ++ LP K
Sbjct: 611 LVNFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKADVATDLPQKKE 670
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
+V+ CKLT Q + Y F+ S+++ R+I+ +Q +L + L+K+CNHP L S
Sbjct: 671 QVLFCKLTKQQRQAYESFLASEDM-RSIANGKRQ--MLYGVDYLRKICNHPDLTEHKTLS 727
Query: 481 GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
PG D SGKM V+ LL L ++ + +
Sbjct: 728 KKPGY-------------------------DYGNANKSGKMQVVKELLS-LWKKGGHKTL 761
Query: 541 LVSNYTQTLDLFAQLCRERRYP---YLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSS 596
L + + LD+ + + P + R+DG T I RQ +V+ FN DP N VFLL++
Sbjct: 762 LFAQHRIMLDILQKFISQ--LPDINWRRMDGETPIKDRQNMVDEFNTDP--NLHVFLLTT 817
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
K GG G+NL G NR++++DPDWNP+ D QA R WR GQK+ V IYR +S GTIEEK+Y
Sbjct: 818 KVGGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYH 877
Query: 657 RQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF---HDDVRSEIHENMHCTRCQ 712
RQ+ K+ L KV++ + Q DL DLFT + +E + +
Sbjct: 878 RQIFKQFLTNKVLKDPK------QRQTFQMSDLHDLFTLGVESAEGETETGNLFRGSEVK 931
Query: 713 NYDDGAESIGEGDETNSA 730
+DG + GE D+ +A
Sbjct: 932 FEEDGKTAEGEKDDATAA 949
>gi|336257783|ref|XP_003343713.1| hypothetical protein SMAC_04371 [Sordaria macrospora k-hell]
gi|380091660|emb|CCC10792.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1171
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 181/620 (29%), Positives = 285/620 (45%), Gaps = 116/620 (18%)
Query: 160 QPEEPQNDGG-NLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
+P +P ND T+ + ++LR +Q EGV+F+ + GCIL DDMG
Sbjct: 187 KPCQPYNDVELEYSAGTIPACIAQYLRDYQVEGVKFLHQ------KFVYQRGCILGDDMG 240
Query: 219 LGKTLQSIALLYTLLCQG---FDGKPMVK----------KAIIVTPTSLVSNWEAEIKKW 265
LGKT+Q A L + D K M K + IIV P SL+ NW+ E+ +W
Sbjct: 241 LGKTVQVAAFLTVAFGKTGDERDAKRMRKMRRAGDLWYPRVIIVCPGSLIQNWKNELNRW 300
Query: 266 VGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC----- 320
V + S R+DV+ ++ L+V+I +Y+T+R +C E+
Sbjct: 301 GWWHVDIYH--GSNREDVLQSANA-----GRLEVMITTYDTYR------NCHEAVNTVEW 347
Query: 321 DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDA 361
D ++ DE H LKN+ + T R N EE + ++N+TNPG G
Sbjct: 348 DCVVADECHVLKNNVSETTRAMDKINAMCRIGLTGTAIQNRYEELWTLLNWTNPGYFGTR 407
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN---QFILRRTNALLSNHLPPK 418
A + + G+ AT K+L I R++ N +F LRR +L+++ LP K
Sbjct: 408 AEWNESITKPLTAGQSHDATL--KQLSIARTTAKKLVQNLLPEFFLRRMKSLIAHQLPKK 465
Query: 419 IIEVVCCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQS 455
+VV C LT +Q Y +F+ +++ ++ + +S
Sbjct: 466 SDKVVFCPLTDVQRIAYENFLDGEHLTYILNAYHPCKCHSGRAAGWCCYKTLSDGRSWKS 525
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP----EMFSGRSGSWTGGD 511
+ I L+K+ NH L+ + N + ++ P E++ R T D
Sbjct: 526 YVFPSIITLQKIANHLTLLIPSSSDPNDKQRSELNVLQTCAPDTWKELYDKRDSMLTLAD 585
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTS 571
E GK +L +LL + D++++ S+ + L + L Y LDG S
Sbjct: 586 P---EFCGKWKILRKLL-RFWHESGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGALS 641
Query: 572 ISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
+RQ++V+ FN DP +FVFL+S+KAGG GLN+ N++V+FDP WNP+ D QA R
Sbjct: 642 YEERQRVVDEFNTDP--RQFVFLISTKAGGVGLNITSANKVVIFDPHWNPSYDLQAQDRA 699
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV-------------IQQEQTDSSA 677
+R GQ + V ++R +S GTIEE VY RQ+ K+ + +Q+++
Sbjct: 700 YRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQANIGYNASNERRYFKGVQRDKNKKGE 759
Query: 678 TQGNFLSTEDLRDLFTFHDD 697
G L +LFTFH D
Sbjct: 760 LFG-------LENLFTFHAD 772
>gi|451996821|gb|EMD89287.1| hypothetical protein COCHEDRAFT_1180734 [Cochliobolus
heterostrophus C5]
Length = 1221
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 176/618 (28%), Positives = 289/618 (46%), Gaps = 108/618 (17%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DGG +P + P L + Q+ GVQ+++E S + G I+ D+MGLGKT+Q++
Sbjct: 386 DGGFRIPGDIYPALFDY----QKTGVQWLWELYSQNV------GGIIGDEMGLGKTIQAV 435
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI-----ALCESTR 280
+ + L K + K I+V P +++ W E +W RV ++ + ++ R
Sbjct: 436 SFVAGLHY----SKLLTKPVIVVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRR 491
Query: 281 DDVVS---GIDSFTDPCSSL------------------QVLIVSYETFRMHSSKFSCSES 319
+D + + ++ D ++L VL+ +Y + ++ +F
Sbjct: 492 EDRIEREMELRNYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYA-EFLIPTE 550
Query: 320 CDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGD 360
+ + DE H+++N T +N+L E +++ +F P LG
Sbjct: 551 WECAVLDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGT 610
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
FR +E I G A+ E + + + L V+ ++L+R A ++ LP K
Sbjct: 611 LVNFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKADVATDLPQKKE 670
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
+V+ CKLT Q + Y F+ S+++ R+I+ +Q +L + L+K+CNHP L S
Sbjct: 671 QVLFCKLTKQQRQAYESFLASEDM-RSIANGKRQ--MLYGVDYLRKICNHPDLTEHKTLS 727
Query: 481 GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
PG D SGKM V+ LL L ++ + +
Sbjct: 728 KKPGY-------------------------DYGNASKSGKMQVVKELLS-LWKKGGHKTL 761
Query: 541 LVSNYTQTLDLFAQLCRERRYP---YLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSS 596
L + + LD+ + + P + R+DG T I RQ +V+ FN DP N VFLL++
Sbjct: 762 LFAQHRIMLDILQKFISQ--LPDINWRRMDGETPIKDRQNMVDEFNTDP--NLHVFLLTT 817
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
K GG G+NL G NR++++DPDWNP+ D QA R WR GQK+ V IYR +S GTIEEK+Y
Sbjct: 818 KVGGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYH 877
Query: 657 RQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF---HDDVRSEIHENMHCTRCQ 712
RQ+ K+ L KV++ + Q DL DLF+ + +E + +
Sbjct: 878 RQIFKQFLTNKVLKDPK------QRQTFQMSDLHDLFSLGVESAEGETETGNLFRGSEVK 931
Query: 713 NYDDGAESIGEGDETNSA 730
+DG GE D+ +A
Sbjct: 932 FEEDGKTVAGEKDDATAA 949
>gi|302824854|ref|XP_002994066.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
gi|300138072|gb|EFJ04853.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
Length = 1046
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 179/620 (28%), Positives = 280/620 (45%), Gaps = 102/620 (16%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
+GG +P+ + L + Q+ GV++++E S L GI G D+MGLGKT+Q I
Sbjct: 286 EGGLRIPLDIYDRLFDY----QKTGVKWLWELHS--LKTGGIIG----DEMGLGKTVQVI 335
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALC--------- 276
A L L M +I+V P +L W+ E++KW VQ++
Sbjct: 336 AFLAAL-----HHSRMYSPSIVVCPVTLTFQWKREVEKWYPKFDVQVVHESAAPKGKKKE 390
Query: 277 ------------ESTRDDVVSGIDSFTDPC--SSLQVLIVSYETFRMHSSKFSCSESCDL 322
++ RD ++ D + S +++ +YE R+
Sbjct: 391 AEDSDASGDDSGDARRDARLARWDGVVEKTVRSPSGLIVTTYEQLRLLKDTL-LDIDWGY 449
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+ DE HR++N T +N L E +++ +F PG LG
Sbjct: 450 AVLDEGHRIRNPDAETTLICKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPV 509
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F+ + I G AT + + + L + +ILRR + + L K V+
Sbjct: 510 FQAQFALPISIGGYANATSLQVSTAYKCAVTLRDLIMPYILRRMKSDVEAKLTKKTEHVL 569
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNP 483
C LT Q Y F+ S +V+R I E +K + L I L+K+CNHP L+
Sbjct: 570 FCSLTETQRACYRAFLASSDVER-IFEGSKNA--LYGIDILRKICNHPDLLE-------- 618
Query: 484 GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVS 543
R S D + SGK+ V++++L + + R+++
Sbjct: 619 -------------------REASEKHADYGLPDRSGKLMVVSQVLNSWKDQGH-RVLVFC 658
Query: 544 NYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
Q LD+ + Y Y R+DG+TS+ +R L++ FN+ S + FVFLL++K GG G
Sbjct: 659 QTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPALIDEFNE-SSHVFVFLLTTKVGGLGT 717
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
NL G NR+++FDPDWNP+ D QA R WR GQ K V +YR ++ GTIEEKVY RQ+ K+
Sbjct: 718 NLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDVIVYRLITRGTIEEKVYHRQIYKQF 777
Query: 664 L-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIG 722
L K+++ Q Q ++D+RDLF H+D + E + AES
Sbjct: 778 LTNKILRDPQ------QRRVFKSKDMRDLFVLHEDAEGDKTETSNLFPELKLPAAAES-- 829
Query: 723 EGDETNSANKNDQSDQEVTD 742
D +A+ ++ DQ D
Sbjct: 830 --DAKEAAHGGEEGDQITRD 847
>gi|150864381|ref|XP_001383167.2| chromatin remodeling complex Adenosinetriphosphatase
[Scheffersomyces stipitis CBS 6054]
gi|149385637|gb|ABN65138.2| chromatin remodeling complex Adenosinetriphosphatase
[Scheffersomyces stipitis CBS 6054]
Length = 1222
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 273/563 (48%), Gaps = 83/563 (14%)
Query: 158 LWQPEEPQNDGGNLVP-ITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D + IT P V+ LR +Q +G+ ++ L+ ILA
Sbjct: 265 LLQDEEHQDDEDHQTTVITESPSFVKEGKLREYQVQGLNWLISLFENRLSG------ILA 318
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P I++ P S + NW E KW V ++
Sbjct: 319 DEMGLGKTLQTISFLGYLRYIKKIDG-PF----IVIVPKSTLDNWRREFAKWTPD-VNVV 372
Query: 274 AL--CESTRDDVVSGIDSFTDPCSSLQVLIVSYETF---RMHSSKFSCSESCDLLICDEA 328
L + R +++ D VLI S+E + H KF + ++ DEA
Sbjct: 373 VLQGTKDARHEIIQNKLLTAD----FDVLITSFEMVIREKSHLKKFRW----EYIVVDEA 424
Query: 329 HRLKN-DQTLTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
HR+KN D +L+ +N+L E +A++NF P + GD+ F ++E
Sbjct: 425 HRIKNEDSSLSQIIRVFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFE 484
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
G E + +K + +L ++ F+LRR A + L PKI V +T
Sbjct: 485 NQ---GGEDVDEDTRQKNQDKVVQQLHQLLSPFLLRRVKADVETSLLPKIETNVYIGMTE 541
Query: 430 LQSELYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
+Q + Y + V + + ++++L + L+K CNHP L +D + G P T
Sbjct: 542 MQIQWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYT-- 598
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
D V SGKM +L ++L + R+++ S ++
Sbjct: 599 ----------------------NDEHLVFNSGKMVILDKMLQKFKSEGS-RVLIFSQMSR 635
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
LD+ C R Y Y R+DG+TS R + ++ +NDP ++F+FLL+++AGG G+NL
Sbjct: 636 LLDILEDYCYLRDYSYCRIDGSTSHEDRIEAIDQYNDPESDKFIFLLTTRAGGLGINLTS 695
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QK 666
+ ++L+D DWNP D QA R R GQKK+V +YRF++ IEEKV R K L Q
Sbjct: 696 ADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQL 755
Query: 667 VIQQ-EQTDSSATQGNFLSTEDL 688
VIQQ Q +++ T GN S +DL
Sbjct: 756 VIQQGRQMNANNTIGN--SKDDL 776
>gi|449666890|ref|XP_002155441.2| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Hydra
magnipapillata]
Length = 1025
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 256/541 (47%), Gaps = 67/541 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM- 242
L +QR GV+++++ L+A + G I+ D+MGLGKT+Q I+ L L+
Sbjct: 266 LYKYQRVGVRWLWQ-----LHAQEVGG-IVGDEMGLGKTIQVISFLAGLVYSKKGNNINN 319
Query: 243 ----VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQ 298
+ +IV P +++ W +E W +A+ S+ + S +
Sbjct: 320 NKFGLGSVLIVCPATVMFQWVSEFHMWWPHF--RVAILHSSGTFIGSPLTLIRAISKHPG 377
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------------- 339
+LI +Y + H + + +I DE H+++N L
Sbjct: 378 ILITTYNSVLNHKKELY-KHNWQYVILDEGHKIRNPDALITLACKQFNTSHRLILTGTPM 436
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+N L+E +++ +F PG LG F + I G A+ + + + L +
Sbjct: 437 QNSLKELWSLFDFVYPGRLGTLPVFMAEFSIPITMGGYANASSLQVQAAYKCCCILKDTI 496
Query: 400 NQFILRRTNALLSN--HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI 457
+++RR + LP K +++ CKLT Q +Y FI S++V ++ + K I
Sbjct: 497 TPYMIRRMKKDVQQTLFLPTKSEQILFCKLTEEQKAIYKEFISSRDVASILNGDMK---I 553
Query: 458 LAYITALKKLCNHPKLI--YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
+ L+K+CNHP L+ ++ G P + C F+
Sbjct: 554 FPGLIKLRKICNHPDLVSLAAEVEKGKPASLDDASCYGFWKR------------------ 595
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
SGKM V+ LL + + R++L + Q LD+ + + Y+R+DGTTS+ R
Sbjct: 596 --SGKMIVVENLL-RMWKHQGHRVLLFTQSKQMLDILEGFLKAAEHSYMRMDGTTSVKSR 652
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
+V F++ SKN FVFLL+++ GG GLNLI NR++++DPDWNP+ D QA R WR GQ
Sbjct: 653 HGIVKKFHE-SKNIFVFLLTTRVGGLGLNLIAANRVIIYDPDWNPSVDSQARERSWRIGQ 711
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFH 695
K V IYR L+TGTIEEK+Y RQ+ K+ L + ++ Q F DL +LFT
Sbjct: 712 LKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVL-----TNPYQRRFFKNNDLHELFTLG 766
Query: 696 D 696
D
Sbjct: 767 D 767
>gi|324502242|gb|ADY40988.1| DNA repair and recombination protein RAD54B [Ascaris suum]
Length = 415
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 229/447 (51%), Gaps = 69/447 (15%)
Query: 217 MGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC 276
MGLGK++Q+I+LL+ LL Q K I++ PTSL+ NW E KW+ QL+
Sbjct: 3 MGLGKSVQAISLLWILLKQLKQKGATSMKFILIAPTSLIGNWRCEFNKWLPHSEQLLFPV 62
Query: 277 ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE-----SCDLLICDEAHRL 331
T S + F VL++SY+ C+E S L+ICDEAHRL
Sbjct: 63 TKT-----SEVRKFMAYSGYSPVLLISYDVV------VRCAELLEKISFALMICDEAHRL 111
Query: 332 KN-----DQTLTN--------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN Q+++ +ND+ EFF++++ P G A FR
Sbjct: 112 KNFNGNLRQSVSRLRTERRLLLTGTPIQNDMSEFFSLLDLAKPAAFGSLAQFRSM----- 166
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
A E+ G+ ++ +++ +LRRT + N+LPP+ V+ C+L+ +Q
Sbjct: 167 ------MANED----GMH---DIQLLLSEILLRRTADVNFNNLPPRHEYVLWCRLSKVQQ 213
Query: 433 ELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
+YN I S LA I L+KLCNHP ++Y ++ S + F C
Sbjct: 214 LIYNRII-----------GLASSDHLAIIDMLRKLCNHPSILYQSLTSKH---GAFNSCE 259
Query: 493 RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLF 552
+ S+ V+ SGK+ V +++ LR+ T++++V+VSN+T+TLD+
Sbjct: 260 STLNATVLRAFPSSFEPNCSTIVD-SGKLSVFVKMMVSLRE-TNEKVVVVSNFTKTLDML 317
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
+++C+ RLDG+ +R +LV+ FN S VFLLS+KA G GLNLIG +RLV
Sbjct: 318 SEVCKGIFCTVTRLDGSVVPHRRMQLVDEFNTSSLPNHVFLLSTKAVGVGLNLIGASRLV 377
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRV 639
LFD DWNPA D QA AR+WRDGQK V
Sbjct: 378 LFDSDWNPAFDVQAMARIWRDGQKNAV 404
>gi|406864834|gb|EKD17877.1| DNA repair protein rhp26 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1202
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 277/601 (46%), Gaps = 101/601 (16%)
Query: 161 PEEP--QNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
P+ P Q D G +P + P L + Q+ GVQ++ E + + G I+ D+MG
Sbjct: 389 PDAPDHQFDNGLKLPGDIYPALFDY----QKTGVQWLGELYAQQV------GGIVGDEMG 438
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW----------VGG 268
LGKT+Q I+ L L K + + I+V P +++ W E +W G
Sbjct: 439 LGKTIQIISFLAGLHYS----KKLTRPIIVVAPATVLRQWVNEFHRWWPPLRVSILHSSG 494
Query: 269 RVQLIALCESTRDDV------VSGIDSFTDPCSSL--------QVLIVSYETFRMHSSKF 314
L E DD +G + + VL+ +Y + ++
Sbjct: 495 SGMLNVGSEGRMDDSQEIYGRSNGKSKSSKAAKKIVDRVVKHGHVLVTTYAGLQTYADVL 554
Query: 315 SCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNP 355
D + DE H+++N T +N+L E +++ +F P
Sbjct: 555 -IPVDWDYAVLDEGHKIRNPNTAITIYCKELRTPNRVILSGTPLQNNLVELWSLFDFVFP 613
Query: 356 GILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHL 415
LG FR+ +E I G AT + + + L A ++ ++L+R +++ L
Sbjct: 614 MRLGTLVNFRQAFEVPIKLGGYANATNLQVLTATKCAETLKAAISPYLLQRLKVDVASDL 673
Query: 416 PPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY 475
P K +V+ CKLT Q E Y F+ S + +I + T+QS L I L+K+CNHP L+
Sbjct: 674 PKKSEQVLFCKLTKPQREAYEMFLSSDEMT-SIMDRTRQS--LYGIDILRKICNHPDLLD 730
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRT 535
+K G PG R+ P SGKM V+ LL + +
Sbjct: 731 PRLK-GKPG-------YRWGNPNK------------------SGKMQVVKALL-EMWKGF 763
Query: 536 DDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFL 593
+ +L S L++ + + + YLR+DG+TSI +RQ LV+ FN DP + VFL
Sbjct: 764 GHKTLLFSQGVLMLNIIEEFVKGLNGFNYLRMDGSTSIKERQTLVDRFNNDPDLH--VFL 821
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
L++K GG G+NL G NR+++FDPDWNP+ D QA R WR GQKK V IYR ++ GTIEEK
Sbjct: 822 LTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKKEVTIYRLMTAGTIEEK 881
Query: 654 VYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF--HDDVRSEIHENMHCTRC 711
+Y RQ+ K+ L I ++ Q +DL DLFT DD +E E T
Sbjct: 882 IYHRQIFKQFLTNKILKD-----PKQRQTFQMKDLYDLFTLGGTDDGTTETGEMFKGTEV 936
Query: 712 Q 712
Q
Sbjct: 937 Q 937
>gi|212536498|ref|XP_002148405.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces marneffei
ATCC 18224]
gi|210070804|gb|EEA24894.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces marneffei
ATCC 18224]
Length = 1157
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 171/633 (27%), Positives = 289/633 (45%), Gaps = 107/633 (16%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DGG VP + P+L + Q+ GVQ+++E + G I+ D+MGLGKT+Q I
Sbjct: 356 DGGYRVPGDIFPILFDY----QKTGVQWLWELYQQQV------GGIIGDEMGLGKTIQVI 405
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW----------VGGRVQLIALC 276
+ L L + + K I+V P +++ W E +W G +
Sbjct: 406 SFLAGL----HHSRKLTKPVIVVAPATVMKQWVTEFHRWWPPFRVSILHTSGSGMINVRN 461
Query: 277 ESTRDDVVSGIDSFTDPCSSL--------------------QVLIVSYETFRMHSSKFSC 316
ES R++ ++ D DP VL+ +Y + ++
Sbjct: 462 ESNRENALN--DEMWDPSRPYTMTKAQKTAKKIVQRVVEEGHVLVTTYSGLQTYAPVL-I 518
Query: 317 SESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGI 357
D I DE H+++N T +N+L E +++ +F P
Sbjct: 519 PVDWDCAILDEGHKIRNPNTSITIHCKELRTPHRLILSGTPMQNNLSELWSLFDFVFPMR 578
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPP 417
LG FR +E I G A+ + + + L ++ ++L+R +++ LP
Sbjct: 579 LGTLVDFRNQFEFPIRQGGYANASNLQVQTAARCAETLKEAISPYLLQRFKVDVASDLPK 638
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT 477
K +V+ CKL+PLQ + Y F++S+ ++ + ++L + L+K+CNHP L+
Sbjct: 639 KSEQVLFCKLSPLQRKAYEQFLNSQECNSILA---GRRQVLYGVDMLRKICNHPDLVTHK 695
Query: 478 IKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
+ S TTG+ + + SGKM V+ LL L + T
Sbjct: 696 LFSA---TTGYGEPSK------------------------SGKMKVVKALL-ELWRDTGH 727
Query: 538 RIVLVSNYTQTLDLFAQLCRERR-YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSS 596
+ +L + + L++ + + Y R+DG T I +RQ LV+ FN+ S + VFLL++
Sbjct: 728 KTLLFAQHRIMLNILEKFVNTLSGFNYRRMDGETPIHRRQLLVDEFNN-SPDIHVFLLTT 786
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
K GG G+NL G +R++++DPDWNP+ D QA R WR GQK+ V IYR ++ GTIEEK+Y
Sbjct: 787 KVGGLGVNLTGADRVIIYDPDWNPSTDMQARERAWRLGQKREVAIYRLMTAGTIEEKIYH 846
Query: 657 RQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDD 716
RQ+ K+ L + ++ Q +L DLF+ ++ ++E +M T +
Sbjct: 847 RQIFKQFLTNKVLKD-----PKQRQTFEMSNLHDLFSLGEEGQTET-SSMFKTEVTYQEK 900
Query: 717 GAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
G + + K D D+E+ + G A +
Sbjct: 901 GESKQDKIKTEQTPPKTD--DKEIQKVEGIAAV 931
>gi|149240541|ref|XP_001526146.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450269|gb|EDK44525.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 1088
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 263/528 (49%), Gaps = 80/528 (15%)
Query: 174 ITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-Y 230
IT P V+ LR +Q EG+ ++ LN + G ILAD+MGLGKTLQ+I+ L Y
Sbjct: 146 ITESPSYVKEGKLREYQIEGLNWLIS-----LNENRLSG-ILADEMGLGKTLQTISFLGY 199
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGID 288
+ DG P II+ P S + NW E KW V+++ L + R+D++
Sbjct: 200 LRYIKHVDG-PF----IIIVPKSTLDNWRREFSKWTPD-VKVVVLQGDKEQRNDIIQN-Q 252
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+T + VLI S+E S + ++ DEAHR+KN+Q+ ++
Sbjct: 253 LYT---AQFDVLITSFEMVLREKSALKKFR-WEYIVVDEAHRIKNEQSSLSQIIRLFYSR 308
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
N+L E +A++NF P + GD+ F ++ R+ +E ++K
Sbjct: 309 NRLLITGTPLQNNLHELWALLNFLLPDVFGDSEQFDETFD------RQNGNSELDEKAKQ 362
Query: 390 ERSSELSAKVNQ----FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--N 443
E ++ +++Q F+LRR A + L PKI V ++T +Q E Y +
Sbjct: 363 EEQDKVIQELHQLLSPFLLRRVKADVEKSLLPKIESNVYTRMTDMQLEWYKKLLEKDIDA 422
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 423 VNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT----------------- 464
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
D ++ SGKM +L ++L Q+ R+++ S ++ LD+ C R Y Y
Sbjct: 465 -------DEHLIDNSGKMIILDKMLKKF-QKEGSRVLIFSQMSRVLDILEDYCYFRDYEY 516
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
R+DG+TS R + ++ +N P +FVFLL+++AGG G+NL + ++L+D DWNP D
Sbjct: 517 CRIDGSTSHEDRIEAIDEYNAPDSAKFVFLLTTRAGGLGINLTSADIVILYDSDWNPQAD 576
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ 670
QA R R GQKK+V +YRF++ IEEKV +R K L Q VIQQ
Sbjct: 577 LQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVIQQ 624
>gi|21622371|emb|CAD37001.1| related to DNA repair protein RAD26 [Neurospora crassa]
Length = 1178
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 290/629 (46%), Gaps = 114/629 (18%)
Query: 147 FTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
F G+ P ++ E + G ++P + ++LR +Q EGV+F+ +
Sbjct: 171 FEESSGIKPCRPYKDVELEYSAG-IIPACI----AQYLRDYQVEGVKFLHQ------KFV 219
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQG---FDGKPMVK----------KAIIVTPTS 253
GCIL DDMGLGKT+Q A L + D K M K + IIV P S
Sbjct: 220 YQRGCILGDDMGLGKTVQVAAFLTAAFGKTGDERDAKRMRKMRRAGDLWYPRVIIVCPGS 279
Query: 254 LVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSK 313
L+ NW+ E+ +W G + S R+DV+ S ++V+I +Y+T+R
Sbjct: 280 LIQNWKNELDRW--GWWHVDVFHGSNREDVLQAAKS-----GRIEVMITTYDTYR----- 327
Query: 314 FSCSESC-----DLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAM 349
+C E+ D ++ DE H LKN + T R N EE + +
Sbjct: 328 -NCHEAVNTVEWDCVVADECHILKNTVSETTRAMDKINAMCRIGLTGTAIQNRYEELWTL 386
Query: 350 VNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN---QFILRR 406
+N+TNPG G A + + G+ AT K+L I R++ N +F LRR
Sbjct: 387 LNWTNPGYFGTRAEWNESITKPLTAGQSHDATL--KQLSIARTTAKKLVQNLLPEFFLRR 444
Query: 407 TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK--------------------- 445
+L+++ LP K +VV C LT +Q + Y +F+ ++V
Sbjct: 445 MKSLIAHQLPKKSDKVVFCPLTDVQRDAYENFLEGEHVTFILNAYQPCKCHSGRAGGFCC 504
Query: 446 -RAISE-ETKQSKILAYITALKKLCNHPKLIY----DTIKSGNPGTTGFEDCIRFFPPEM 499
+ +S+ T +S + I L+K+ NH L+ D + + C E+
Sbjct: 505 YKTLSDGRTWKSYVFPSIITLQKIANHLTLLIPSSSDPKEKQRSELNVLQTCAPDTWKEL 564
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
++ R + + E GK +L +LL + D++++ S+ + L + L
Sbjct: 565 YNNRESMLSLANP---EFCGKWKILRKLL-RFWHESGDKVLVFSHSVRLLRILQHLFHNT 620
Query: 560 RYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
Y LDG S +RQ++V+ FN DP +FVFL+S+KAGG GLN+ N++V+FDP W
Sbjct: 621 SYNVSFLDGALSYEERQRVVDEFNTDP--RQFVFLISTKAGGVGLNITSANKVVIFDPHW 678
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKE----------GLQKVI 668
NP+ D QA R +R GQ + V ++R +S GTIEE VY RQ+ K+ ++
Sbjct: 679 NPSYDLQAQDRAYRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQANIGYNASNERRYF 738
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
+ Q D + +G L +LFTFH D
Sbjct: 739 KGVQRDKN-RKGELFG---LENLFTFHAD 763
>gi|429966476|gb|ELA48473.1| hypothetical protein VCUG_00082 [Vavraia culicis 'floridensis']
Length = 833
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 268/534 (50%), Gaps = 81/534 (15%)
Query: 167 DGGNLVPITVDPLLVR-FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
D G P +R LR +Q EGV ++ +N CILAD+MGLGKTLQ+
Sbjct: 49 DLGYAYSFRTSPKYIRGTLREYQIEGVNWLISMHEKNIN------CILADEMGLGKTLQT 102
Query: 226 IALLYTLLCQGFDGKPMVKKA--IIVTPTSLVSNWEAEIKKWV-GGRVQLIALCESTRDD 282
I L G+ + KA +++ P SL+ NW+AE K++ R+ + ++ D
Sbjct: 103 ITFL------GYLKNFLKNKAPHLLIVPKSLLHNWKAEFTKFLPSFRLFIFHASQAEIKD 156
Query: 283 VVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-- 340
+++ ++ V+I +YE F + C L+I DEAHR+KN+ +L ++
Sbjct: 157 TEENMEN-----TNYDVVITTYEMCISAKKVFQRIQWCYLVI-DEAHRIKNEASLLSKIV 210
Query: 341 -----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
N++ E +A++NF +P + D F ++ T E
Sbjct: 211 RIFRCEHRLLLTGTPLQNNVHELWALLNFLDPKLFKDPEQFEKWI----------TQMEN 260
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
+KK GI+ +L + F LRR + L PK + + +LT +Q LY I K+
Sbjct: 261 DKKGGID---QLRKVLQLFFLRREKRDVEKTLLPKKVINLYPQLTTMQRNLYK-MILEKD 316
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
+ +++ +S +L + L+K CNHP L +D ++ G P TT
Sbjct: 317 LTPLLNKREVKSSLLNVVIQLRKCCNHPYL-FDGMEPGPPYTT----------------- 358
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
D V SGKM L +LL +++R + R+++ + T+TLD+ C R Y Y
Sbjct: 359 -------DEHLVYNSGKMMYLDKLLTEMKRR-NSRVLIFTQMTRTLDILEDYCTMREYEY 410
Query: 564 LRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND 623
R+DG+TS ++R + ++ FN + F+FLLS++AGG G+NL + ++++D DWNP D
Sbjct: 411 RRIDGSTSAAERGEAIDEFNAENSEIFIFLLSTRAGGLGINLATADIVIMYDSDWNPQID 470
Query: 624 KQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
QA R R GQ K+VF+++F++ TIEEK+ R + K L +++ + ++S+
Sbjct: 471 LQAQDRAHRIGQTKQVFVFKFITESTIEEKIIYRALKKLKLDEILVKNNLNTSS 524
>gi|444318900|ref|XP_004180107.1| hypothetical protein TBLA_0D00800 [Tetrapisispora blattae CBS 6284]
gi|387513149|emb|CCH60588.1| hypothetical protein TBLA_0D00800 [Tetrapisispora blattae CBS 6284]
Length = 1058
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 269/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + DG P
Sbjct: 137 LRDYQIQGLNWLIALHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKKIDG-PF 189
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+++ P S + NW E KW V + L + TR D++ + + VL
Sbjct: 190 ----LVIVPKSTLDNWRREFSKWTP-EVSTVILHGDKDTRADILHNVV----LEAKFDVL 240
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + ++ DEAHR+KN+Q+ ++ N
Sbjct: 241 ITSYEMVIKEKGTLKKI-AWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQN 299
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P + GD+ F ++E + E+++++ ++ +L + +N
Sbjct: 300 NLHELWALLNFLLPDVFGDSEVFDEWFEQN--------NNEQDQEVVVQ---QLHSVLNP 348
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V AI + ++++L
Sbjct: 349 FLLRRIKADVEKSLLPKIETNVYVGMTEMQLKWYKSLLEKDIDAVNGAIGKREGKTRLLN 408
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D V +G
Sbjct: 409 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLVFNAG 443
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R + Y R+DG+T+ +R + +
Sbjct: 444 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRGFNYCRIDGSTAHEERIQAI 502
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ ++FVFLL+++AGG G+NL+ + +VLFD DWNP D QA R R GQKK+V
Sbjct: 503 DDYNSPNSDKFVFLLTTRAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQV 562
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ ++ GN + +DL ++ +
Sbjct: 563 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKRTSNLGN--TKDDLVEMIQY 616
>gi|119181856|ref|XP_001242107.1| hypothetical protein CIMG_06003 [Coccidioides immitis RS]
gi|392865000|gb|EAS30737.2| SNF2 family helicase/ATPase [Coccidioides immitis RS]
Length = 2054
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/575 (29%), Positives = 270/575 (46%), Gaps = 96/575 (16%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I +DP + R ++PHQ G+QFM+ L+ GC+LA MGLGKT+Q I+ L T+
Sbjct: 954 IYLDPHIGRLVKPHQLHGMQFMWR---ELIKDDKRQGCLLAHTMGLGKTMQVISFLVTIA 1010
Query: 234 CQGFDGKPMVKKAI----------IVTPTSLVSNWEAEIKKWVG---------GRVQLIA 274
P ++K I I+ P SL+ NW E +W+ G V+ +
Sbjct: 1011 KAANSPDPEIRKQIPDCFRESRTLILCPPSLIENWSEEFMRWLPQDPATKRSLGPVRKVL 1070
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFR--MH-----------------SSKFS 315
+R+ + +T+ +L++SY+ FR +H S K
Sbjct: 1071 SNIQSRERLQEIAAWYTEGG----ILLISYDIFRSLVHNASTKRRPRPLEPNQHESVKKQ 1126
Query: 316 CSESCDLLICDEAHRLKNDQT----------------LTNR---NDLEEFFAMVNFTNPG 356
+++I DEAH++KN T LT N LEE++AM+N+ PG
Sbjct: 1127 LLNGPNIIIADEAHKMKNRTTGIAAAACGFKSKSRIALTGSPLANHLEEYYAMINWIAPG 1186
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
LGD F+ Y I G +T E++ +++ L ++ I R ++L+ LP
Sbjct: 1187 YLGDFVQFKAKYIEPIEAGLYVDSTRAERRESLKKLQVLKKDLDPKINRADISVLAGDLP 1246
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHP----- 471
PK+ V+ LT LQ E Y ++ + ++ +++ A++ L LCNHP
Sbjct: 1247 PKVEFVITVPLTALQEEAYKLYVETL---MDTGDDVASTRVWAWLAILSLLCNHPSCFME 1303
Query: 472 KLI----------------YDTIKSGNPGT--TGFED--CIRFFPPEMFSGRSGSWTGGD 511
KL+ Y++ P T + ED + PE S + G +
Sbjct: 1304 KLLGKNIDKRAKALIQDSEYESFPEDTPATQDSSPEDTPVTQVLAPETISKLKRVFDGIN 1363
Query: 512 GAWVELSGKMHVLARLLGHLRQRTD--DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
++ + H A L ++Q + D++++ S+ TL+ + + R+ Y RLDGT
Sbjct: 1364 D--LKSTAHSHRAAMLDQIIKQSVNAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGT 1421
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
T I+ RQ FN V+L+S+KAGG GLN+ G NR+V+FD +NP ++QA R
Sbjct: 1422 TPITSRQSATKSFNKIDSPMQVYLISTKAGGLGLNIPGANRVVIFDFAFNPTWEEQAVGR 1481
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
+R GQ+K VF+YRF++ GT E+ +Y + + K L
Sbjct: 1482 AYRFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQL 1516
>gi|367003313|ref|XP_003686390.1| hypothetical protein TPHA_0G01190 [Tetrapisispora phaffii CBS 4417]
gi|357524691|emb|CCE63956.1| hypothetical protein TPHA_0G01190 [Tetrapisispora phaffii CBS 4417]
Length = 1118
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 269/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + DG P
Sbjct: 206 LRDYQIQGLNWLISLYENKLSG------ILADEMGLGKTLQTISFLGYLRYHKQVDG-PF 258
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+++ P S + NW E KKW V + L + R D++ + VL
Sbjct: 259 ----LVIVPKSTLDNWRREFKKWTPD-VNAVILHGDKEKRHDILQN----RVLQAKFDVL 309
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 310 ITSYEMI-IKEKNVLKKVAWEYIVIDEAHRIKNEQSSLSQIIRLFYSRNRLLITGTPLQN 368
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF + D+ F ++E + +EE++++ ++ +L +N
Sbjct: 369 NLHELWALLNFLLSDVFSDSELFDEWFEQN--------NSEEDQEVVVQ---QLHTVLNP 417
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI + + +Q + Y + V A+++ ++++L
Sbjct: 418 FLLRRIKADVEKSLLPKIEVNLYVGMAQMQRKWYKSLLEKDIDAVNGAVTKREGKTRLLN 477
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D V SG
Sbjct: 478 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLVFNSG 512
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L +LL L+++ R+++ S ++ LD+ C R Y Y R+DG+TS +R + +
Sbjct: 513 KMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYLRDYEYCRIDGSTSHEERIEAI 571
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P ++F+FLL+++AGG G+NL+ + +VLFD DWNP D QA R R GQKK+V
Sbjct: 572 DEYNKPDSDKFIFLLTTRAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQV 631
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
++YRF++ IEEKV +R K L Q VIQQ +A+ GN + +DL ++ +
Sbjct: 632 YVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASIGN--NKDDLIEMVQY 685
>gi|50289791|ref|XP_447327.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526637|emb|CAG60264.1| unnamed protein product [Candida glabrata]
Length = 1071
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 191/664 (28%), Positives = 299/664 (45%), Gaps = 141/664 (21%)
Query: 159 WQPEEPQNDGGNL-----VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
WQ P+ L +P + LL + Q+ GVQ+++E G I+
Sbjct: 271 WQKPHPEIPDAKLNNEFKIPGEIFSLLFNY----QKTGVQWLYELFQQR------RGGII 320
Query: 214 ADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW-------- 265
D+MGLGKT+Q A L L P+ +IV P +++ W EI +W
Sbjct: 321 GDEMGLGKTIQVTAFLAALHHSNLLSGPV----LIVCPATVMKQWCNEIHQWWPPFRAVI 376
Query: 266 ---VGGRVQ------------LIALCESTRDDV-----VSGIDSFTDPCSSLQ------- 298
+G + +I E D S + S + +Q
Sbjct: 377 LHSIGAGMNDKSNLTEDEIENMIIKSELENTDFHDYENASKLKSKVETGMHMQNLISKVV 436
Query: 299 ----VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---DQTLT-------NR---- 340
++I +Y R+HS K + + + DE H+++N + +LT NR
Sbjct: 437 ADGHIIITTYVGLRIHSDKL-LNVNWSYCVLDEGHKIRNPDSEISLTCKKLKCKNRIILS 495
Query: 341 -----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
N+L E +++ +F PG LG F++ + I G AT + + G + L
Sbjct: 496 GTPIQNNLVELWSLFDFIYPGRLGTLPVFQQQFVQPINMGGYANATNTQVQTGYRCAVAL 555
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
++ ++LRR A ++ LP K V+ CKLT Q Y F+ S + + + +
Sbjct: 556 RDLISPYLLRRVKADVAKDLPKKKEMVLFCKLTEFQRRKYLEFLSSDELSQI---KGGKR 612
Query: 456 KILAYITALKKLCNHPKLI-YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
+L I L+K+CNHP L+ D IK+ T+G+ D R
Sbjct: 613 HVLYGIDILRKICNHPDLLDRDYIKN----TSGYGDPKR--------------------- 647
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR-----YPYLRLDGT 569
SGKM V+ +LL L + + +L + Q LD+ + + + YLR+DGT
Sbjct: 648 ---SGKMQVVKQLL-KLWKSEGHKTLLFTQSRQMLDILEEFIKFKEPELSDIRYLRMDGT 703
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
TSI RQ LV+ FN+ S + VFLL+++ GG G+NL G NR++++DPDWNP+ D QA R
Sbjct: 704 TSIQVRQTLVDRFNNESYD--VFLLTTRVGGLGVNLTGANRIIIYDPDWNPSTDLQARER 761
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDL 688
WR GQK+ V IYR + +GTIEEK+Y RQ+ K+ L KV+ S Q F T++L
Sbjct: 762 AWRIGQKREVSIYRLMISGTIEEKIYHRQIFKQFLMNKVL------SDPKQKRFFKTKEL 815
Query: 689 RDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAG 748
+DLF+ + Q Y E++ E E ++ D+S ++ D+
Sbjct: 816 QDLFSLGGE--------------QGY--STETLNEEVEKHTKKLKDESTKDSDDLDQVTN 859
Query: 749 LAGC 752
L G
Sbjct: 860 LDGV 863
>gi|303318787|ref|XP_003069393.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109079|gb|EER27248.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 2054
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 167/575 (29%), Positives = 270/575 (46%), Gaps = 96/575 (16%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I +DP + R ++PHQ G+QFM+ L+ GC+LA MGLGKT+Q I+ L T+
Sbjct: 954 IYLDPHIGRLVKPHQLHGMQFMWR---ELIKDDKRQGCLLAHTMGLGKTMQVISFLVTIA 1010
Query: 234 CQGFDGKPMVKKAI----------IVTPTSLVSNWEAEIKKWVG---------GRVQLIA 274
P ++K I I+ P SL+ NW E +W+ G V+ +
Sbjct: 1011 KAANSPDPEIRKQIPDCFRESRTLILCPPSLIENWSEEFMRWLPQDPATKRSLGPVRKVL 1070
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFR--MH-----------------SSKFS 315
+R+ + +T+ +L++SY+ FR +H S K
Sbjct: 1071 SNIQSRERLQEIAAWYTEGG----ILLISYDIFRSLVHNASTKRRPRPLEPNQHESVKQQ 1126
Query: 316 CSESCDLLICDEAHRLKNDQT----------------LTNR---NDLEEFFAMVNFTNPG 356
+++I DEAH++KN T LT N LEE++AM+N+ PG
Sbjct: 1127 LLNGPNIIIADEAHKMKNRTTGIAAAACGFKSKSRIALTGSPLANHLEEYYAMINWIAPG 1186
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
LGD F+ Y I G +T E++ +++ L ++ I R ++L+ LP
Sbjct: 1187 YLGDFVQFKAKYIEPIEAGLYVDSTRAERRESLKKLQVLKKDLDPKINRADISVLAGDLP 1246
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHP----- 471
PK+ V+ LT LQ E Y ++ + ++ +++ A++ L LCNHP
Sbjct: 1247 PKVEFVITIPLTALQEEAYKLYVETL---MDTGDDVASTRVWAWLAILSLLCNHPSCFME 1303
Query: 472 KLI----------------YDTIKSGNPGT--TGFED--CIRFFPPEMFSGRSGSWTGGD 511
KL+ Y++ P T + ED + PE S + G +
Sbjct: 1304 KLLGKNIDKRAKALIQDSEYESFPEDTPATQDSSPEDTPVTQVLAPETISKLKRVFDGIN 1363
Query: 512 GAWVELSGKMHVLARLLGHLRQRTD--DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
++ + H A L ++Q + D++++ S+ TL+ + + R+ Y RLDGT
Sbjct: 1364 D--LKSTAHSHRAAMLDQIIKQSINAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGT 1421
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
T I+ RQ FN V+L+S+KAGG GLN+ G NR+V+FD +NP ++QA R
Sbjct: 1422 TPITNRQSATKSFNKIDSPMQVYLISTKAGGLGLNIPGANRVVIFDFAFNPTWEEQAVGR 1481
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
+R GQ+K VF+YRF++ GT E+ +Y + + K L
Sbjct: 1482 AYRFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQL 1516
>gi|345325793|ref|XP_001505482.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 1292
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 269/573 (46%), Gaps = 100/573 (17%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
HQREGV F++ L G G ILADDMGLGKT+Q IA L + FD + +V
Sbjct: 100 HQREGVAFLYS-----LFRDGKKGGILADDMGLGKTIQIIAFLSGM----FDAE-LVNYV 149
Query: 247 IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
++V PT+L+S W E KW G +++ +++ + ++ V+I +Y+
Sbjct: 150 LLVMPTTLISTWTREFAKWTPG-IRVKNFHGASKTERTKNLERIQRKTG---VIITTYQM 205
Query: 307 FRMHSSKFSCSES----CDLLICDEAHRLKNDQTLT----------NR---------NDL 343
+ + S D LI DEAH++K + T NR N+L
Sbjct: 206 LINNWQQLSSLNGREFVWDYLIFDEAHKIKTSASKTAICARSIPAHNRILLTGTPVQNNL 265
Query: 344 EEFFAMVNFTNPG-ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
+E +++ + G +LG + F+ YE I RE AT EK LG + S L +
Sbjct: 266 QELWSLFDVACQGSLLGTSTTFKMEYENPITRAREKDATPGEKALGFKISENLMTIIKPH 325
Query: 403 ILRRTNALLSNH-----------------LPPKIIE-------VVCCKLTPLQSELYNHF 438
LRRT + L P++ ++ +LT LQ ++Y F
Sbjct: 326 FLRRTKEDVQKRTASQPKSNLSEKSQDDDLAPEMPSLSRKNDFIIWVRLTSLQEDIYRKF 385
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDT------IKSGN------PGTT 486
+ ++K + E LA + LKKLC+HP+L+ ++ G GT
Sbjct: 386 VSLDHIKELLMETRSP---LAELGVLKKLCDHPRLLSARACTLLGLEGGGFSDQDENGTD 442
Query: 487 GFEDCIRF--FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSN 544
+ D R P D +E SGK+ L LL L QR + ++ S
Sbjct: 443 HYSDINRIGQLP--------------DQTLMEESGKLMFLMALLKRL-QREGHQTLVFSQ 487
Query: 545 YTQTLDLFAQLCRERRYPYLRLDGTTS-ISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGL 603
+ LD+ +L + LR+DGT + + +R+K ++ F +K+ VFLL+++ GG GL
Sbjct: 488 SRKMLDIIERLLTNTHFKILRVDGTIAQLGEREKRISLFQK-NKDYSVFLLTTQVGGVGL 546
Query: 604 NLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEG 663
L R+V+FDP WNPA D QA R +R GQK+ V IYR ++ GT+EEK+Y+RQ+ K+
Sbjct: 547 TLTAATRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDS 606
Query: 664 LQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
L + + T + S ++LR+LF D
Sbjct: 607 LVR----QTTGDKKNPFRYFSKQELRELFVIED 635
>gi|350398865|ref|XP_003485330.1| PREDICTED: DNA excision repair protein ERCC-6-like [Bombus
impatiens]
Length = 1162
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 254/512 (49%), Gaps = 64/512 (12%)
Query: 221 KTLQSIALLYTLLCQGF--DGKPM--VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIAL 275
KT+Q IA L L C DG + II+ P +L+ W +W RV ++
Sbjct: 359 KTVQVIAFLAGLDCSELLSDGGRFRGLGPTIIICPATLMEQWVKHFHEWWPILRVAVLHQ 418
Query: 276 CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
C + + ++ S VLI SY +H S+ +I DE H+++N Q
Sbjct: 419 CGTYNGN----LEYLMHSLKSGGVLITSYSGMLIHKDLLVTSQ-WHYVILDEGHKIRNPQ 473
Query: 336 TLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
++ N L+E +++ +F PG LG F + I G
Sbjct: 474 AKISKAVKEFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAAPITRGG 533
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHL--PPKIIEVVCCKLTPLQSEL 434
A+ ++ + ++ ++ L + ++LRRT + +HL P K +V+ C LT Q EL
Sbjct: 534 YTNASPLQEAIALQVATMLRDTITPYMLRRTKNDVQHHLSLPEKNEQVLFCSLTGEQKEL 593
Query: 435 YNHFIHSKNVKRAISEETK------QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
Y ++ S +V + E+ ++++L ++ L+K+CNHP L T NP +
Sbjct: 594 YKEYLRSADVSFILHEKINSVNRRYRARLLIALSVLRKICNHPDLFLYT----NPVDSDE 649
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
+ + E F G W + SGKM ++ R L + ++ R++L + Q
Sbjct: 650 DIDVSNEALEKF-----------GYW-KRSGKM-IVVRSLLKIWKKQGHRVLLFTQGRQM 696
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIG 607
+ + L + Y YLR+DG TS+S+RQ+ + FN DPS FVFLL+++ GG G+NL G
Sbjct: 697 MHVLESLVQSEEYSYLRMDGITSMSQRQETIRLFNKDPSY--FVFLLTTRVGGLGVNLTG 754
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QK 666
NR+V++DPDWNPA D QA AR WR GQ K+V IYR ++ GTIEEK+Y RQ+ K L K
Sbjct: 755 ANRVVIYDPDWNPATDAQARARAWRIGQNKKVTIYRLITAGTIEEKMYHRQIFKILLANK 814
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV 698
V++ + Q T DL +LF F++ +
Sbjct: 815 VLEDPR------QHRLFKTSDLVELFNFNESI 840
>gi|320034532|gb|EFW16476.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira]
Length = 2050
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 166/575 (28%), Positives = 268/575 (46%), Gaps = 96/575 (16%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I +DP + R ++PHQ G+QFM+ L+ GC+LA MGLGKT+Q I+ L T+
Sbjct: 950 IYLDPHIGRLVKPHQLHGMQFMWR---ELIKDDKRQGCLLAHTMGLGKTMQVISFLVTIA 1006
Query: 234 CQGFDGKPMVKKAI----------IVTPTSLVSNWEAEIKKWVG---------GRVQLIA 274
P ++K I I+ P SL+ NW E +W+ G V+ +
Sbjct: 1007 KAANSPDPEIRKQIPDCFRESRTLILCPPSLIENWSEEFMRWLPQDPATKRSLGPVRKVL 1066
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFR-------------------MHSSKFS 315
+R+ + +T+ +L++SY+ FR S K
Sbjct: 1067 SNIQSRERLQEIAAWYTEGG----ILLISYDIFRSLVHNASTKRRPRPLEPNQHESVKQQ 1122
Query: 316 CSESCDLLICDEAHRLKNDQT----------------LTNR---NDLEEFFAMVNFTNPG 356
+++I DEAH++KN T LT N LEE++AM+N+ PG
Sbjct: 1123 LLNGPNIIIADEAHKMKNRTTGIAAAACGFKSKSRIALTGSPLANHLEEYYAMINWIAPG 1182
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
LGD F+ Y I G +T E++ +++ L ++ I R ++L+ LP
Sbjct: 1183 YLGDFVQFKAKYIEPIEAGLYVDSTRAERRESLKKLQVLKKDLDPKINRADISVLAGDLP 1242
Query: 417 PKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHP----- 471
PK+ V+ LT LQ E Y ++ + ++ +++ A++ L LCNHP
Sbjct: 1243 PKVEFVITIPLTALQEEAYKLYVETL---MDTGDDVASTRVWAWLAILSLLCNHPSCFME 1299
Query: 472 KLI----------------YDTIKSGNPGT--TGFED--CIRFFPPEMFSGRSGSWTGGD 511
KL+ Y++ P T + ED + PE S + G +
Sbjct: 1300 KLLGKNIDKRAKALIQDSEYESFPEDTPATQDSSPEDTPVTQVLAPETISKLKRVFDGIN 1359
Query: 512 GAWVELSGKMHVLARLLGHLRQRTD--DRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
++ + H A L ++Q + D++++ S+ TL+ + + R+ Y RLDGT
Sbjct: 1360 D--LKSTAHSHRAAMLDQIIKQSINAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGT 1417
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
T I+ RQ FN V+L+S+KAGG GLN+ G NR+V+FD +NP ++QA R
Sbjct: 1418 TPITNRQSATKSFNKIDSPMQVYLISTKAGGLGLNIPGANRVVIFDFAFNPTWEEQAVGR 1477
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
+R GQ+K VF+YRF++ GT E+ +Y + + K L
Sbjct: 1478 AYRFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQL 1512
>gi|224133490|ref|XP_002328055.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222837464|gb|EEE75843.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 843
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 171/581 (29%), Positives = 285/581 (49%), Gaps = 93/581 (16%)
Query: 172 VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYT 231
VP +++ L+ HQREGV+F+++ L N HG +L DDMGLGKT+Q+IA L
Sbjct: 115 VPASINCRLLE----HQREGVKFLYKLY--LDN----HGGVLGDDMGLGKTIQTIAFLAA 164
Query: 232 LLCQ--------GFDGKPMVKKA--IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRD 281
+ + G + KK +I+ PTS++ NWE+E +W V L + RD
Sbjct: 165 IFEKDEESGESITLRGNQVGKKGPVLIICPTSVIHNWESEFSRWASFSVSLYH--GTNRD 222
Query: 282 DVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----- 336
++ + + +++LI S++T+R+H S S +++I DEAHRLKN+++
Sbjct: 223 LILEKLKA-----GGVEILITSFDTYRIHGSILS-EVDWEVVIVDEAHRLKNEKSKLYLA 276
Query: 337 -----------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATE 382
LT +N + E F ++++ PG LG +FR +Y+ + G+ TA E
Sbjct: 277 CLEIKTRKRIGLTGTVMQNKIIELFNLLDWVAPGSLGSREHFREFYDEPLKHGQRSTAPE 336
Query: 383 EEKKLGIERSSELSAKVNQFILRRTNALLSNHLP-PKIIEVVCCKLTPLQSELYNHFIHS 441
+ +R L + + +++LRRT HL K VV C ++ LQ +Y +
Sbjct: 337 SFVRKADKRKEHLVSVLCKYMLRRTKEETIGHLMMGKEDNVVFCSMSELQRRVYRSMLQL 396
Query: 442 KNVKRAISEET--------KQSK------------------------------ILAYITA 463
+++ ++++ KQ + +L +
Sbjct: 397 PDIQCLVNKDLPCSCGSPLKQVECCKRIVPDGIIWPYLHRDNPEGCDSCPYCLVLPCLVK 456
Query: 464 LKKLCNHPKLIYDTIKS---GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
L+++ NH +LI + F + ++ G + S + V+ GK
Sbjct: 457 LQQISNHLELIKPNPRDEPDKQKKDAEFASAVFGADVDLVGGNAQSENFMGLSDVKHCGK 516
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M L +L+ R D+I+L S + LD+ + + + + RLDG+T + RQ LV+
Sbjct: 517 MQALEKLMFSWASR-GDKILLFSYSVRMLDILEKFLIRKGHSFSRLDGSTPTNLRQSLVD 575
Query: 581 HFND-PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
FN PSK VFL+S++AGG GLNL+ NR+V+FDP+WNPA D QA R +R GQK+ V
Sbjct: 576 DFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 633
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
++R L+ G+ EE VY RQ+ K+ L + + ++ +G
Sbjct: 634 VVFRLLAAGSFEELVYSRQVYKQQLSNIAVSGKIENRYFEG 674
>gi|367010340|ref|XP_003679671.1| hypothetical protein TDEL_0B03310 [Torulaspora delbrueckii]
gi|359747329|emb|CCE90460.1| hypothetical protein TDEL_0B03310 [Torulaspora delbrueckii]
Length = 1049
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 171/559 (30%), Positives = 276/559 (49%), Gaps = 83/559 (14%)
Query: 163 EPQNDGGNLVPITVDPLLVRF--LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLG 220
E +D G+ +T P ++ LR +Q +G+ ++ L+ ILAD+MGLG
Sbjct: 108 EGDDDYGDSNFVTESPSYIQHGKLRDYQIQGLNWLIALHENKLSG------ILADEMGLG 161
Query: 221 KTLQSIALLYTL-LCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--E 277
KTLQ+I+ L L +G +G P +++ P S + NW E KW V I L +
Sbjct: 162 KTLQTISFLGHLRYRKGIEG-PF----LVIVPKSTLDNWRREFAKWTP-EVNAIVLHGDK 215
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND-QT 336
+ R +++ + + VLI SYE + +I DEAHR+KN+ T
Sbjct: 216 NARQEILQDVI----LEAKFDVLITSYEMVIKEKGTLK-RLAWQYIIIDEAHRIKNEAST 270
Query: 337 LTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
L+ +N+L E +A++NF P + GD+ F ++E +
Sbjct: 271 LSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEIFDEWFEQN------- 323
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
+EE++++ ++ +L +N F+LRR A + L PKI + +T +Q Y
Sbjct: 324 -NSEEDQEVVVQ---QLHTVLNPFLLRRIKADVEKSLLPKIETNLYVGMTDMQIHWYKSL 379
Query: 439 IHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
+ V + + ++++L + L+K CNHP L ++ + G P TT
Sbjct: 380 LEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FEGAEPGPPYTT---------- 428
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
D V +GKM VL +LL L+++ R+++ S ++ LD+ C
Sbjct: 429 --------------DEHLVYNAGKMIVLDKLLHRLKEKGS-RVLIFSQMSRLLDILEDYC 473
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
R Y Y R+DG+T+ +R + ++ FN P +FVFLL+++AGG G+NL+ + +VL+D
Sbjct: 474 FFREYEYCRIDGSTAHEERIEAIDEFNKPDSEKFVFLLTTRAGGLGINLVTADTVVLYDS 533
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDS 675
DWNP D QA R R GQKK+V +YRF++ IEEKV +R K L Q VIQQ
Sbjct: 534 DWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGNGKK 593
Query: 676 SATQGNFLSTEDLRDLFTF 694
+A GN + +DL ++ F
Sbjct: 594 TANLGN--NKDDLIEMIQF 610
>gi|347836765|emb|CCD51337.1| similar to DNA repair protein Rhp26/Rad26 [Botryotinia fuckeliana]
Length = 1209
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 182/607 (29%), Positives = 284/607 (46%), Gaps = 108/607 (17%)
Query: 138 VENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFE 197
EN++ +E F PG QP+ +G L P + P L + Q+ GVQ++ E
Sbjct: 400 AENSLEKEWFKPCPG-------QPDHEFENGLKL-PGDIFPALFDY----QKTGVQWLSE 447
Query: 198 CVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSN 257
+ + G I+ D+MGLGKT+Q I+ L L K + K I+V P +++
Sbjct: 448 LHNQQV------GGIIGDEMGLGKTIQMISFLAGLHY----SKKLTKPVIVVAPATVLRQ 497
Query: 258 WEAEIKKWVGG-RVQLI-------------ALCESTRDDVVSGIDSFTDPCSSL------ 297
W E +W RV ++ E D+++ G + P S
Sbjct: 498 WVNEFHRWWPALRVSILHSSGTGMLNVGNEDRLEDDDDEILYGQTTKKAPKSQKLAQKIV 557
Query: 298 -------QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----------- 339
VL+ +Y + +S+ + D + DE H+++N T
Sbjct: 558 DRVVKHGHVLVTTYAGLQTYSNTL-INVDWDYAVLDEGHKIRNPNTAVTIYCKELRTPNR 616
Query: 340 --------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
+N L E +++ +F P LG FR+ +E I G AT + +
Sbjct: 617 VILSGTPMQNGLVELWSLFDFVFPMRLGTLVNFRQAFEVPIKIGGYANATNLQVLTATKC 676
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEE 451
+ L ++ ++L+R ++ LP K +V+ CKLT Q + Y F+ S ++K +I
Sbjct: 677 AETLKDAISPYLLQRLKVDVAADLPKKSEQVLFCKLTRPQRDAYEMFLASDDMK-SILNR 735
Query: 452 TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGD 511
++QS L I L+K+CNHP L+ +K+ P+ W G+
Sbjct: 736 SRQS--LYGIDILRKICNHPDLLDKRLKN---------------KPDY------KWGNGN 772
Query: 512 GAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTT 570
SGKM V+ LL + + + +L S Q LD+ + ++ + YLR+DG T
Sbjct: 773 K-----SGKMQVVKALL-QMWKGYGHKTLLFSQGVQMLDILEEFVKKLGGFNYLRMDGGT 826
Query: 571 SISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
++ RQ LV+ FN DP + VFLL++K GG G+NL G NR+++FDPDWNP+ D QA R
Sbjct: 827 AVKDRQTLVDQFNNDPEMH--VFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARER 884
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLR 689
WR GQKK V IYR ++ GTIEEK+Y RQ+ K+ L I ++ Q + +DL
Sbjct: 885 AWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKD-----PKQRQTFAMKDLY 939
Query: 690 DLFTFHD 696
DLFT D
Sbjct: 940 DLFTLGD 946
>gi|255720466|ref|XP_002556513.1| KLTH0H15158p [Lachancea thermotolerans]
gi|238942479|emb|CAR30651.1| KLTH0H15158p [Lachancea thermotolerans CBS 6340]
Length = 1021
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 257/512 (50%), Gaps = 79/512 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+IA L Y +G DG
Sbjct: 129 LRDYQIQGLNWLLSLHDNKLSG------ILADEMGLGKTLQTIAFLGYLRYVKGIDGP-- 180
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
II+ P S ++NW+ E+ KW V + L + R ++ I C VL
Sbjct: 181 ---HIIIVPKSTLNNWKRELAKWTP-EVNTVVLSGDKYERQQLLKDI---VLECK-FDVL 232
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + +I DEAHR+KN+++ ++ N
Sbjct: 233 ITSYEMVIREKATLKRFR-WQYIIVDEAHRIKNEESALSQIIRLFHSEGRLLITGTPLQN 291
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P + GD+ F +++ + T+E++++ ++ +L ++
Sbjct: 292 NLHELWALLNFLLPDVFGDSDAFDEWFQQN--------NTDEDQEVVVQ---QLHTVLSP 340
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR + + L PKI + +T +Q + Y + V AI + +++L
Sbjct: 341 FLLRRLKSEVETSLLPKIETNLYVGMTDMQVQWYKSLLEKDLDAVNGAIGKREGNTRLLN 400
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D + +G
Sbjct: 401 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLIFNAG 435
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +LL R+ R+++ S ++ LD+ C R Y Y R+DG+TS +R +
Sbjct: 436 KMIVLDKLLKKKRE-AGSRVLIFSQMSRLLDILEDYCFFREYSYCRIDGSTSHEERIDAI 494
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ FN+P+ ++F+FLL+++AGG G+NL+ + +VL+D DWNP D QA R R GQKK+V
Sbjct: 495 DQFNEPNSDKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQV 554
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ 670
++YRF++ IEEKV +R K L Q VIQQ
Sbjct: 555 YVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ 586
>gi|157875048|ref|XP_001685931.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin]
gi|68129004|emb|CAJ06440.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin]
Length = 1103
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 292/600 (48%), Gaps = 82/600 (13%)
Query: 163 EPQNDGGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + G +++ +T P +R LRP+Q EGV ++ GL A G++G ILAD+MGLGK
Sbjct: 144 EEDSTGFDMMHLTETPSYIRGKLRPYQIEGVNWLL----GLF-ARGVNG-ILADEMGLGK 197
Query: 222 TLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
T Q+IA + Y G G +V V P S++ NW E K W G L+ ++
Sbjct: 198 TFQTIATIAYLKFTVGMPGPHLV-----VCPKSVMGNWYREFKHWCPG--LLVYKFHASS 250
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE--SCDLLICDEAHRLKNDQTLT 338
D S + + P ++ ++ TF M + + + + LI DEAH+LKN++
Sbjct: 251 DIRPSIVKAHLHPTDRIKYDVI-VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRA 309
Query: 339 N-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
+ +N+L+E +A+++F P + D+ F +++T T
Sbjct: 310 HTALDSLQTSHRLIITGTPLQNNLKELWALLHFLAPRLFNDSESFDTWFDT--------T 361
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
+ +++ + S L + ++RR A +S +PPK V C+L+ Q E Y + +
Sbjct: 362 SGQQDANV----MSNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKKQREWYMNVL 417
Query: 440 HSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM 499
+K+ + + + + +L+K+ NHP L+ D + G P T
Sbjct: 418 -AKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLM-DGGEEGPPFVT------------- 462
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR--IVLVSNYTQTLDLFAQLCR 557
D V SGKM +L +LL LR R +++ S +T L++ C
Sbjct: 463 -----------DEKLVRTSGKMVILDKLLHRLRADVQGRHKVLIFSQFTSMLNILEDYCN 511
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R + Y R+DG TS R + FN PS + F+FLLS++AGG G+NL N ++L+D D
Sbjct: 512 MRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIFLLSTRAGGLGINLQAANHVILYDSD 571
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSS 676
WNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L V+QQ + S
Sbjct: 572 WNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGRLQSK 631
Query: 677 ATQGNFLSTEDLRDLFTF-HDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
AT N + E+L + TF +++ HE++ D E+I TN A + Q
Sbjct: 632 AT--NQATKEELLSMITFGAEEIFKTRHEDVTEADIDRLLDEGETIS-NQLTNDAKQQVQ 688
>gi|356511188|ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 938
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 276/586 (47%), Gaps = 89/586 (15%)
Query: 163 EPQNDG-----GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDM 217
EP+NDG G + + L PHQREG+++++ L+ G G IL DDM
Sbjct: 235 EPENDGSITLTGPRSTYKLQARIANMLYPHQREGLKWLWS-----LHCLG-KGGILGDDM 288
Query: 218 GLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
GLGKT+Q L G ++++A+IV P +L+ +W E+ + L E
Sbjct: 289 GLGKTMQMCGFL-----AGLFHSRLIRRALIVAPKTLLPHWIKELSA--------VGLSE 335
Query: 278 STRDDVVSGID----SFTDPCSSLQVLIVSYETFRMHSSKFSCSE-----------SCDL 322
TR+ + VL+ +Y+ R +S + + D
Sbjct: 336 KTREYFGTSTKLREYELQYILQDKGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGVTWDY 395
Query: 323 LICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAY 363
+I DE H +KN T + N+L+E +A+ NF P +LGD +
Sbjct: 396 MILDEGHLIKNPSTQRAKSLLEIPSAHCIIISGTPLQNNLKELWALFNFCCPELLGDHEW 455
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH--------L 415
F+ +E I+ G + A+ EK++G + EL ++ + LRR + + N L
Sbjct: 456 FKERFENPILRGNDKHASYREKRVGSSVAKELRDCIHPYFLRRLKSEIFNQDDEKTTTKL 515
Query: 416 PPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY 475
K +V +LT +Q LY F++SK V AI LA IT LKK+C+HP L+
Sbjct: 516 SQKQEIIVWLRLTSVQRHLYEAFLNSKIVLSAI-----DGSPLAAITILKKICDHPHLL- 569
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE-------LSGKMHVLARLL 528
T ++ G + ++ P E + D A + +S K+ + LL
Sbjct: 570 -TKRAAEGVLEGIDSMLK--PEEANVAEKLAMHIADVAGKDKFKDKQDVSCKISFIMSLL 626
Query: 529 GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
+L +++ S + L+L + Y +LR+DGTT S R K+VN F +
Sbjct: 627 DNLIPE-GHCVLIFSQTRKMLNLIEECLVSEGYDFLRIDGTTKASDRLKIVNDFQE-GFG 684
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
+FLL+S+ GG GL L +R+++ DP WNP+ D Q+ R +R GQKK V +YR ++ G
Sbjct: 685 APIFLLTSQVGGLGLTLTRADRVIVVDPSWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCG 744
Query: 649 TIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
T+EEK+Y++Q+ K GL K+ + + Q + S +DLR LF+
Sbjct: 745 TVEEKIYRKQVYKGGLFKIATEHK-----EQIRYFSQQDLRGLFSL 785
>gi|366989549|ref|XP_003674542.1| hypothetical protein NCAS_0B00810 [Naumovozyma castellii CBS 4309]
gi|342300406|emb|CCC68165.1| hypothetical protein NCAS_0B00810 [Naumovozyma castellii CBS 4309]
Length = 1060
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 268/536 (50%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + DG P
Sbjct: 137 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLRYVKKIDG-PF 189
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+IV P S + NW E KW V I L + R ++ I + VL
Sbjct: 190 ----LIVVPKSTLDNWRREFNKWTP-EVNAIVLHGDKEERHKILYDIVL----EAKFDVL 240
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+Q+ ++ N
Sbjct: 241 ITSYEMV-IKEKNVLKKFAWQYIVIDEAHRIKNEQSQLSQIIRLFYSKNRLLITGTPLQN 299
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P + GD+ F ++E + +E+++++ ++ +L +N
Sbjct: 300 NLHELWALLNFLLPDVFGDSGIFDEWFEQN--------NSEQDQEIVVQ---QLHTVLNP 348
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 349 FLLRRIKADVEKSLLPKIETNVYVGMTEMQVKWYKSLLEKDIDAVNGAVGKREGKTRLLN 408
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D V +G
Sbjct: 409 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLVFNAG 443
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +LL L+++ R+++ S ++ LD+ C R Y Y R+DG+T+ R + +
Sbjct: 444 KMIVLDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCFFRGYEYCRIDGSTAHEDRIEAI 502
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P+ ++FVFLL+++AGG G+NL+ + ++L+D DWNP D QA R R GQKK+V
Sbjct: 503 DEYNKPNSDKFVFLLTTRAGGLGINLVTADTVILYDSDWNPQADLQAMDRAHRIGQKKQV 562
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A+ G+ + +DL ++ +
Sbjct: 563 TVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGS--NKDDLLEMIQY 616
>gi|339247147|ref|XP_003375207.1| DNA excision repair protein ERCC-6 [Trichinella spiralis]
gi|316971517|gb|EFV55276.1| DNA excision repair protein ERCC-6 [Trichinella spiralis]
Length = 1202
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 166/560 (29%), Positives = 261/560 (46%), Gaps = 98/560 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLC-----QGFD 238
L +Q+ GV ++ +C S G IL D+MGLGKT+Q IA L +L QGF
Sbjct: 88 LHKYQKVGVHWLLDCYSKAT------GAILGDEMGLGKTVQLIAFLISLFVSNKYVQGFQ 141
Query: 239 GKPMVKK----------------AIIVTPTSLVSNWEAEIKKWVGGRVQLIALCEST--- 279
+ + +I P +L+ +W E+ W R ++ L ES
Sbjct: 142 YELWTVEFEFNLHSNFSIYGLGPVLIACPATLLFHWVQELHHW-WPRFRVAVLHESGSFE 200
Query: 280 --RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQT 336
R++++ I+ S +LI SY + + + + DE H ++N D
Sbjct: 201 GPRENLIRSINK------SRGILITSYGMMLRFENAL-LQQHWHIAVLDEGHLIRNPDAK 253
Query: 337 LTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
LT +N L E +++ +F PG+LG + F R I G
Sbjct: 254 LTKIVKQLRTPYRIIITGSPMQNSLRELWSLFDFVYPGLLGSLSVFLRELGVPITQGGYA 313
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSN--HLPPKIIEVVCCKLTPLQSELYN 436
TAT + + + + L + ++LRR + + +LP K ++ C+LT Q LY
Sbjct: 314 TATALQVRTAYKCAFILRNAIAPYLLRRMKSEVQAEVNLPSKKEHILFCQLTGPQKSLYK 373
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
+ +S+ K +S + LAY L+KLCNHP L+
Sbjct: 374 QYANSEECKAILSGKLDIFLGLAY---LRKLCNHPDLV---------------------- 408
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLC 556
R+ + + SGKM VL LL +Q + RI+L S Q L++
Sbjct: 409 -----SRAVGENSNEFGYFRRSGKMIVLHSLLKLWKQE-NHRILLFSQSRQMLNILEDFL 462
Query: 557 RERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDP 616
++R Y +LR+DGTT++ RQ +V FN+ + + FV LL+++ GG GL+L G +R++L+DP
Sbjct: 463 KKRNYAHLRMDGTTAVGSRQSIVTTFNE-NADIFVLLLTTRVGGLGLDLTGADRVILYDP 521
Query: 617 DWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSS 676
DWNP D QA R WR GQ V +YR +S+GT+EEK+Y RQ+ K+ L + + +
Sbjct: 522 DWNPTTDAQAQERAWRLGQTSDVVVYRLVSSGTVEEKIYHRQIFKQFLMNRVLR-----N 576
Query: 677 ATQGNFLSTEDLRDLFTFHD 696
+ Q F + DLFT+ D
Sbjct: 577 SRQRRFFKGLNTFDLFTYVD 596
>gi|429860233|gb|ELA34975.1| DNA repair protein rhp26 [Colletotrichum gloeosporioides Nara gc5]
Length = 1143
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 176/579 (30%), Positives = 277/579 (47%), Gaps = 98/579 (16%)
Query: 161 PEEPQNDGGN--LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
P+ P + GN +P + P L + Q+ GV ++ E L G+ G I+ D+MG
Sbjct: 366 PDHPDHVFGNGLKLPGDIHPSLFAY----QKTGVHWLAE-----LYEQGV-GGIIGDEMG 415
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---- 273
LGKT+Q+IA++ L K + K I+V P +++ W E +W RV ++
Sbjct: 416 LGKTVQAIAMVAALHY----SKKLDKPVIVVVPATVMKQWVNEFHRWWPPLRVSILHSSG 471
Query: 274 -ALCESTRDDVVSGIDSFTDPCSSL-------------QVLIVSYETFRMHSSKFSCSES 319
+ DD S +D + + + VL+ +Y + ++ + S
Sbjct: 472 SGMMNQHEDD--SDLDDGGESTNRVAARRIVNRVVKHGHVLVTTYAGLQSYNEEL-LQHS 528
Query: 320 CDLLICDEAHRLKNDQT----------LTNR---------NDLEEFFAMVNFTNPGILGD 360
I DE H+++N NR N+L E +++ +F P LG
Sbjct: 529 WGYAILDEGHKIRNPNAEITVACKHLNTVNRVILSGTPIQNNLTELWSLFDFIFPMRLGT 588
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
FR +E I G AT + + ++ L ++Q++L+R +++ LP K
Sbjct: 589 LVSFRTQFELPIKQGGYANATNLQVMTAEKCATTLKETISQYLLQRLKIDVASDLPEKTE 648
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
+V+ CKLT Q Y FI S V + T++ K L I L+K+CNHP L+ D +K
Sbjct: 649 QVLFCKLTQSQLTAYTRFISSDAVGEIM---TRKRKALYGIDILRKICNHPDLLDDRLK- 704
Query: 481 GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
R + GD A SGKM ++ LL + +R + +
Sbjct: 705 ----------------------RDAKYDWGDPA---KSGKMQMVNELLP-MWKRFGHKTL 738
Query: 541 LVSNYTQTLDLFAQLCRERR-YPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKA 598
L S L++ + R Y+R+DG T I +RQ L++ FN DPS + VFLL+++
Sbjct: 739 LFSQTKLMLNILEKFIRRMDGVSYVRMDGDTPIEQRQALIDRFNHDPSID--VFLLTTRT 796
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GG G+NL G R++++DPDWNP+ D QA R WR GQ K V IYR +++GTIEEK+Y RQ
Sbjct: 797 GGLGINLTGATRIIIYDPDWNPSTDMQARERAWRLGQTKPVAIYRLMTSGTIEEKIYHRQ 856
Query: 659 MSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ K+ + KV++ + + NF DL DLF+F D
Sbjct: 857 IFKQFMTNKVLKDPK-----QRANF-DLSDLYDLFSFGD 889
>gi|365986577|ref|XP_003670120.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
gi|343768890|emb|CCD24877.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
Length = 1115
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 266/536 (49%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + DG P
Sbjct: 178 LRDYQVQGLNWLISLHENKLSG------ILADEMGLGKTLQTISFLGYLKYIKKIDG-PF 230
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGIDSFTDPCSSLQVL 300
+I+ P S + NW E KW V I L + TR ++ + VL
Sbjct: 231 ----LIIVPKSTLDNWRREFNKWTP-EVNAIILHGDKETRHKIIYDFI----LQARFDVL 281
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I SYE + + ++ DEAHR+KN+++ ++ N
Sbjct: 282 ITSYEMVIKEKNALKKV-AWQYIVIDEAHRIKNEESQLSQIIRLLYSKHRLLITGTPLQN 340
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P + GD+ F ++E + +E+++++ ++ +L +N
Sbjct: 341 NLHELWALLNFLLPDVFGDSGIFDDWFEQN--------NSEQDQEIVVQ---QLHTVLNP 389
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 390 FLLRRIKADVEKSLLPKIETNVYVGMTDMQIKWYKSLLEKDIDAVNGAVGKREGKTRLLN 449
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L ++ + G P TT D V +G
Sbjct: 450 IVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLVFNAG 484
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM VL +LL L+++ R+++ S ++ LD+ C R + Y R+DG+TS R + +
Sbjct: 485 KMIVLDKLLKRLKEKGS-RVLVFSQMSRLLDILEDYCYFRGFNYCRIDGSTSHEDRIEAI 543
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P ++FVFLL+++AGG G+NL+ + +VLFD DWNP D QA R R GQKK+V
Sbjct: 544 DDYNKPDSDKFVFLLTTRAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQV 603
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L Q VIQQ +A GN + +DL ++ +
Sbjct: 604 HVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTANIGN--NKDDLLEMIQY 657
>gi|340914879|gb|EGS18220.1| helicase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 1066
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 180/605 (29%), Positives = 278/605 (45%), Gaps = 108/605 (17%)
Query: 169 GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIAL 228
G ++P + ++LR +Q GV+F+ + GCIL DDMGLGKT+Q +A
Sbjct: 171 GGIIPAPI----AQYLRDYQIAGVKFLHQ------RFVYQKGCILGDDMGLGKTVQVVAF 220
Query: 229 LYTLLCQGFD--------------GKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
L + D G + +IV P SL+ NW E+ +W G
Sbjct: 221 LAAAFGKTGDERDTKRMRKMRRAAGDLWYPRVLIVCPGSLIRNWYNELSRW--GWWHADI 278
Query: 275 LCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFR-MHSSKFSCSESCDLLICDEAHRLKN 333
S +DDV++ + L+++I +Y T++ MH + + C ++ DE H LK+
Sbjct: 279 YHGSGKDDVLAAAKA-----GRLEIMITTYTTYKNMHQAVNTVEWDC--VVADECHVLKD 331
Query: 334 DQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
++ T + N EE + ++N+TNPG G A + +
Sbjct: 332 LKSETTQSMNCVNALCRIGLTGTAIQNKYEELWTLLNWTNPGKFGTRADWDHAISKPLKV 391
Query: 375 GREPTATEEEKKLGIERSSELSAKVN---QFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
G+ AT +E L + RS+ N F LRR L+++ LP K +VV C LT LQ
Sbjct: 392 GQSHDATLKE--LSLARSTAKKLVYNLLPDFFLRRMKTLIADQLPKKTDKVVFCPLTTLQ 449
Query: 432 SELYNHFIHSKNVKRAISE-----------------------ETKQSKILAYITALKKLC 468
E Y +F+ S+ ++ IS + +S + I L+K+
Sbjct: 450 REAYENFLDSEQIEYIISASDPCDCGSGRKSGWCCHKTLPDGRSWRSVVFPSIVTLQKIA 509
Query: 469 NHPKLIYDTIKSGNP------GTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
NH L+ T +G+P C+ EM+ R + + A E GK
Sbjct: 510 NHLTLLVPT--TGDPRDKQETELANLRTCLPEGWEEMYRNRD---SMVNLANPEFCGKWK 564
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL D++++ S+ + L + L + Y LDG+ S RQK V+ F
Sbjct: 565 VLRKLL-RFWHENGDKVLVFSHSVRLLRILQCLFQNTSYNVSFLDGSLSYEDRQKAVDDF 623
Query: 583 N-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
N DP +FVFL+S+KAGG GLN+ N++V+FDP WNP++D QA R +R GQ + V +
Sbjct: 624 NSDP--QQFVFLISTKAGGMGLNITSANKVVIFDPHWNPSHDLQAQDRAYRIGQSRDVDV 681
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTED---------LRDLF 692
+R +S GTIEE VY RQ+ K+ + T+ +G ED L +LF
Sbjct: 682 FRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYFKG---VQEDKHRRGEIFGLHNLF 738
Query: 693 TFHDD 697
+FH D
Sbjct: 739 SFHAD 743
>gi|448522400|ref|XP_003868680.1| Isw2 protein [Candida orthopsilosis Co 90-125]
gi|380353020|emb|CCG25776.1| Isw2 protein [Candida orthopsilosis]
Length = 1047
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 179/596 (30%), Positives = 286/596 (47%), Gaps = 89/596 (14%)
Query: 158 LWQPEEPQNDGGNLVPI-TVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D N + T P ++ LR +Q +G+ ++ L+ ILA
Sbjct: 109 LLQDEEHQDDEENQHTVFTESPSYIKEGTLREYQIQGLNWLISLYENRLSG------ILA 162
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P II+ P S + NW E KW V ++
Sbjct: 163 DEMGLGKTLQTISFLGYLRYVKNIDG-PF----IIIVPKSTLDNWRREFAKWTPD-VSVV 216
Query: 274 ALC--ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
L + +R +++ D + VLI S+E S + + ++ DEAHR+
Sbjct: 217 VLQGDKESRANIIK--DRLY--TADFDVLITSFEMVLREKSALKKFK-WEYIVVDEAHRI 271
Query: 332 KNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN+Q+ ++ N+L E +A++NF P + GD+ F ++
Sbjct: 272 KNEQSSLSQIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEQFDDTFD--- 328
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQ----FILRRTNALLSNHLPPKIIEVVCCKLT 428
+ E++KK E ++ +++Q F+LRR + + L PKI V +T
Sbjct: 329 ----QQNNNEQDKKTKAEEQDKVIQELHQLLSPFLLRRVKSDVEKSLLPKIETNVYTGMT 384
Query: 429 PLQSELYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+Q Y + + V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 385 DMQVSWYKNLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT 443
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
D V SGKM +L ++L +Q R+++ S +
Sbjct: 444 ------------------------DEHLVYNSGKMIILDKMLKKFKQEGS-RVLIFSQMS 478
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
+ LD+ C R Y Y R+DG+T+ R + ++ +N P ++F+FLL+++AGG G+NL
Sbjct: 479 RVLDILEDYCYFREYEYCRIDGSTAHEDRIEAIDEYNAPDSDKFIFLLTTRAGGLGINLT 538
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-Q 665
+ ++L+D DWNP D QA R R GQKK+V +YRF++ IEEKV +R K L Q
Sbjct: 539 SADVVILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQ 598
Query: 666 KVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
VIQQ + ++ T N S++D DL ++ E T DD ESI
Sbjct: 599 LVIQQGRQANAGT--NVGSSKD--DLIEMIQHGAQKVFEESKSTVV---DDDIESI 647
>gi|348517334|ref|XP_003446189.1| PREDICTED: hypothetical protein LOC100700470 [Oreochromis
niloticus]
Length = 1506
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/583 (29%), Positives = 278/583 (47%), Gaps = 94/583 (16%)
Query: 153 VDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCI 212
+DP L P E + + VP T++ R+LR +QREG++F++ N GCI
Sbjct: 79 IDPR-LCVPLELSDAHEDRVPYTIN----RYLRDYQREGIRFIYN------NYIRSRGCI 127
Query: 213 LADDMGLGKTLQSIALLYTLLCQG------FDGKPMVKKA-----------IIVTPTSLV 255
L DDMGLGKT+Q I L +L + + +P ++ +IV P S++
Sbjct: 128 LGDDMGLGKTVQVIGFLAAVLHKTGTWEDIANNRPQFLQSQQSSKQMQQVFLIVAPLSVL 187
Query: 256 SNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS 315
NW+ E+ W G Q + + +++ ++ I +++ + +YET R+ +F+
Sbjct: 188 YNWKDELDTW--GHFQCVVVHGLRKEEELARIRK-----GRVEIALTTYETLRLCLDQFN 240
Query: 316 CSESCDLLICDEAHRLKN-DQTLTN------------------RNDLEEFFAMVNFTNPG 356
+ ++ DEAH++KN D +T +N+LEE + ++++ PG
Sbjct: 241 KID-WSAVVVDEAHKIKNPDSQITQAMKELRCKVRIGLTGTILQNNLEELWCVLDWAIPG 299
Query: 357 ILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLP 416
L +F+ + I G+ +AT+ G + L K++ + RRT A++ LP
Sbjct: 300 CLDSLGHFKNKFSDPIEQGQRHSATKRALATGRKAVRALVRKISHWFFRRTKAIIKEQLP 359
Query: 417 PKIIEVVCCKLTPLQSELYNHFI-----------------HSKNVKRAISEETKQSKI-- 457
K VV C +T Q +Y + HS+ +R+ +T +
Sbjct: 360 KKDDRVVYCSMTEFQQTVYQAVLDSEDVTLLLRSSEKCDCHSRRTRRSCCYKTNTDGVHM 419
Query: 458 ----LAYITALKKLCNHPKLIYDTIKSGNPGTTGFED------CIRFFP--PEMFSGRSG 505
+Y+ L+K+ NH L+ T PGT+ ++ C + F PE F R
Sbjct: 420 KELYFSYLAILRKVANHVALLQST-----PGTSKKQEKYVSAVCAKVFQKFPE-FVHRCK 473
Query: 506 SWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLR 565
+ + SGKM VL +LL Q+ D ++++ S T+ LD+ C + R
Sbjct: 474 NEAFEALSDPMYSGKMKVLQKLLKFYLQKRD-KVLIFSLSTKLLDVLESYCMAVGLDFSR 532
Query: 566 LDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
LDG+T +R ++V FN S L+S+ AGG GLN +G N +VLFDP WNPAND Q
Sbjct: 533 LDGSTKSKERVQIVRDFNSSSHINLC-LVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQ 591
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
A R +R GQ + V + R +S GT+EE +Y RQ+ K+ L +
Sbjct: 592 AIDRAYRIGQCRDVTVLRLISLGTVEEVIYLRQIYKQQLHSSV 634
>gi|121714457|ref|XP_001274839.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL
1]
gi|119402993|gb|EAW13413.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL
1]
Length = 1221
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 197/733 (26%), Positives = 331/733 (45%), Gaps = 133/733 (18%)
Query: 97 GYDNGNDQL---------ARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEENF 147
G D+G++++ +RR ARKR + P I + D+P EE +
Sbjct: 342 GLDDGDEKVYQSRIQSWVSRRSAARKRASKELKAEPDAEAIVDE-DIP------TEEEEW 394
Query: 148 TLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG 207
+P P V + D G +P ++P L + Q+ GVQ+++E +
Sbjct: 395 FMPHPTVPDVSY-------DNGYRLPGDINPYLFDY----QKTGVQWLWELYQQKV---- 439
Query: 208 IHGCILADDMGLGKTLQSIALLYTL-LCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW- 265
G I+ D+MGLGKT+Q+IA L L + DG P+ I+V P +++ W E +W
Sbjct: 440 --GGIIGDEMGLGKTIQTIAFLAGLHYSKKLDG-PI----IVVCPATVMKQWVNEFHRWW 492
Query: 266 ---------VGGRVQLIALCESTRDDVVSGIDSFTDPCSSL------------------Q 298
G + ES+R+D + S++ +L
Sbjct: 493 PPFRVSILHTSGSGMINIRNESSREDALLS-QSYSYGSRALTSNQKAARKVVKRVVEEGH 551
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------------- 339
VL+ +Y + ++ F I DE H+++N T
Sbjct: 552 VLVTTYSGIQTYAP-FLIPVEWGCAILDEGHKIRNPNTSITIHCKELRTPHRVILSGTPM 610
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+N+L E +++ +F P LG FR +E I G A+ + + + + L +
Sbjct: 611 QNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAI 670
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
+ ++L+R ++ LP K +V+ CKLT Q E Y F+ S++++ + + ++L
Sbjct: 671 SPYLLQRFKIDVAADLPKKTEQVLFCKLTKSQREAYETFLRSEDMQSILK---GRRQVLY 727
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K+CNHP L ++S G G+G SG
Sbjct: 728 GVDILRKICNHPDLQNHKLESHQVGY------------------------GNG---NRSG 760
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTTSISKRQKL 578
KM V+ LL L + T + +L + + LD+ + + + R+DGTT I RQ +
Sbjct: 761 KMQVVKSLL-ELWRDTGHKTLLFAQHRIMLDILEKFVNSLSGFNHRRMDGTTPIQHRQAM 819
Query: 579 VNHF-NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
V+ F NDP N VFLL++K GG G+NL G +R++++DPDWNP+ D QA R WR GQK+
Sbjct: 820 VDEFNNDP--NLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKR 877
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
V +YR ++ GTIEEK+Y RQ+ K+ L I + D Q +F DL DLF+ D+
Sbjct: 878 EVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILK---DPKQRQTSF-QLSDLYDLFSLGDE 933
Query: 698 V-----RSEIHENMHCTRCQNYD-DGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAG 751
S++ ++ T + D G +S G + + +A++ + ++V + G
Sbjct: 934 KPGSTETSKLFKDAEVTFQGDTDTSGQQSAGSQNASTTAHEEKKDIRKVVGVSSLEDYQG 993
Query: 752 CLHKLKSSEKQLG 764
+ + +K G
Sbjct: 994 ESEQPRDPDKGAG 1006
>gi|307109027|gb|EFN57266.1| hypothetical protein CHLNCDRAFT_143830 [Chlorella variabilis]
Length = 491
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 199/370 (53%), Gaps = 34/370 (9%)
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+N+L EF+AMVNF NP LG F R I RE A+++E++LG +RS+ELS +V
Sbjct: 11 QNNLSEFYAMVNFVNPDSLGSLQAFERVLAAPINKSRERGASDKERELGEKRSAELSRRV 70
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR--AISEETKQSKI 457
F+LRRT + + +LPP VV T LQ +Y+ + S +V++ A S +
Sbjct: 71 EAFVLRRTREVNAKYLPPLASYVVP---TQLQLRVYSSVLGSSSVRKLLATSGGDYGDQT 127
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
L +T L+K+CNHP L Y G + F P +
Sbjct: 128 LTVLTNLRKICNHPAL-YAPGGGEGQEAGGEQQEAEFDPDQ------------------- 167
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGKM VL +L +R+V+VS T LDL +LC + +R+DG T + KRQ
Sbjct: 168 SGKMAVLGVVLRESISGAGERVVVVSQSTAALDL--KLCDGCGFKTVRIDGGTDVGKRQD 225
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
+VN FN VFLLS+ AGG GLNL G NRLVL D WNPA D QA ARVWRDGQKK
Sbjct: 226 VVNSFN----RHGVFLLSTTAGGAGLNLTGANRLVLLDSHWNPAMDLQAMARVWRDGQKK 281
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ---QEQTDSSATQGNFLSTEDLRDLFTF 694
+YR L+TGT++EK+YQRQ+ K + + + ++ ++ + E+LR LFT
Sbjct: 282 ACVVYRLLTTGTLDEKMYQRQLKKGDIAATMMGGGGKAGGAAGSKAGGGNKEELRQLFTL 341
Query: 695 HDDVRSEIHE 704
D + H+
Sbjct: 342 RTDTACDTHD 351
>gi|385303978|gb|EIF48017.1| dna dependent atpase [Dekkera bruxellensis AWRI1499]
Length = 862
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 182/590 (30%), Positives = 277/590 (46%), Gaps = 73/590 (12%)
Query: 159 WQPEEPQNDGGNL-----VPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
W+ P + G L +P + P L + Q+ GVQ+++E S G I+
Sbjct: 128 WEKPHPTANDGILNDEFRIPGDIYPSLFDY----QKTGVQWLWELYSQKT------GGII 177
Query: 214 ADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQL 272
D+MGLGKT+Q IA L L G KP+ ++V P +++ W E +W RV +
Sbjct: 178 GDEMGLGKTIQVIAFLAGLQYSGKLKKPV----LVVCPATVLRQWCNEFHRWWPAFRVMI 233
Query: 273 IALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE-AHRL 331
+ S +SG+ + H S S + E HR
Sbjct: 234 LHSIGSG----MSGMSKKRRSQLRDEENXEEDLELEEHQSHRSAHSIMNEQNARELVHRA 289
Query: 332 --KNDQTLTN-------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
K +T +N+L E +++ +F PG LG F++ + I G
Sbjct: 290 VSKGHVIITTYVGVRIYANGTPIQNNLVELWSLFDFIFPGRLGTLPVFQKQFCIPINLGG 349
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYN 436
AT + + G + + L ++ ++LRR A ++ LP K V+ C LT Q LY
Sbjct: 350 YANATNVQVQAGYKCAVILKDLISPYLLRRVKADVAQDLPKKSEMVLFCNLTKRQRVLYQ 409
Query: 437 HFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP 496
F+HS++++R + + L I L+K+CNHP L+ I G G +D
Sbjct: 410 SFLHSEDIERILK---GKRNALYGIDILRKICNHPDLVEGKIIDGKR-EXGTKD------ 459
Query: 497 PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ-- 554
S + S T E SGKM V+++LL L Q+ + + ++ + Q L++
Sbjct: 460 ----SKKESSRT-----LAEKSGKMQVVSKLL-QLWQKENRKALIFTQTRQMLNIMEHYM 509
Query: 555 --LCRE--RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
L RE + YLR+DGTT I +RQKLV+ FN K + VFLL+++ GG G+NL G +R
Sbjct: 510 DVLNRETNNXFGYLRMDGTTPIGERQKLVDSFNTDPKYQ-VFLLTTRVGGLGVNLTGASR 568
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
++++DPDWNP+ QA R WR GQKK V IYR + GTIEEK+Y RQ+ K+ L + +
Sbjct: 569 VIIYDPDWNPSTXIQARERAWRLGQKKDVTIYRLMIAGTIEEKIYHRQIFKQFLTNKVLK 628
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHD-DVRSEIHENMHCTRCQNYDDGAE 719
+ Q F D+ DLFT D D + ++ R NY E
Sbjct: 629 D-----PKQKRFFKMTDMYDLFTLGDQDTKGTDTADLFGARETNYSGTKE 673
>gi|146413953|ref|XP_001482947.1| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC
6260]
Length = 1034
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 266/548 (48%), Gaps = 84/548 (15%)
Query: 170 NLVPITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIA 227
+L IT PL ++ LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+IA
Sbjct: 106 HLTIITESPLYIKDGTLREYQIQGLNWLISLYENRLSG------ILADEMGLGKTLQTIA 159
Query: 228 LL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
L Y + DG P II+ P S + NW E +W V+ + L + +DD
Sbjct: 160 FLGYLRYIKNIDG-PF----IIIVPKSTLDNWRREFARWT-PEVKAVVL-QGNKDDRA-- 210
Query: 287 IDSFTDPC---SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN--- 339
F C + VLI S+E S+ ++ DEAHR+KN D +L+
Sbjct: 211 --EFIKNCLLQADFDVLITSFEMVMREKSQLKKFR-WQYIVVDEAHRIKNEDSSLSQIIR 267
Query: 340 ---------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
+N+L E +A++NF P + GD+ F ++E+ G + +++
Sbjct: 268 LFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFESQ---GSKEEGNQDK 324
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS--K 442
+L ++ F+LRR + + L PKI V C +T +Q Y +
Sbjct: 325 V------VQQLHKVLSPFLLRRVKSDVETSLLPKIETNVYCGMTEMQIRWYKKLLEKDID 378
Query: 443 NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSG 502
V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 379 AVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT---------------- 421
Query: 503 RSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYP 562
D SGKM +L ++L R++ R+++ S ++ LD+ C R Y
Sbjct: 422 --------DEHLAYNSGKMIILDKMLKKFREQG-SRVLIFSQMSRLLDILEDYCYLRDYE 472
Query: 563 YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
Y R+DG+T+ R + ++ +N P ++F+FLL+++AGG G+NL + ++L+D DWNP
Sbjct: 473 YCRIDGSTAHEDRIEAIDLYNAPDLDKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQA 532
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ-EQTDSSATQG 680
D QA R R GQKK+V +YRF++ IEEKV +R K L Q VIQQ Q ++ G
Sbjct: 533 DLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGRQVTNANAIG 592
Query: 681 NFLSTEDL 688
N S +DL
Sbjct: 593 N--SKDDL 598
>gi|354547921|emb|CCE44656.1| hypothetical protein CPAR2_404600 [Candida parapsilosis]
Length = 1062
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 180/592 (30%), Positives = 282/592 (47%), Gaps = 82/592 (13%)
Query: 158 LWQPEEPQNDGGNLVPI-TVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D N + T P V+ LR +Q +G+ ++ L+ ILA
Sbjct: 111 LLQDEEHQDDEENQHTVFTESPSYVKEGTLREYQIQGLNWLISLYENRLSG------ILA 164
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P II+ P S + NW E KW V ++
Sbjct: 165 DEMGLGKTLQTISFLGYLRYVKHIDG-PF----IIIVPKSTLDNWRREFAKWTPD-VNVV 218
Query: 274 ALC--ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
L + R +++ D + VLI S+E S + + ++ DEAHR+
Sbjct: 219 VLQGDKELRANIIK--DRLY--TADFDVLITSFEMVLREKSALKKFK-WEYIVVDEAHRI 273
Query: 332 KNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN+Q+ ++ N+L E +A++NF P + GD+ F ++
Sbjct: 274 KNEQSSLSQIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEQFDDTFDQQN 333
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
E EE+ K+ EL ++ F+LRR + + L PKI V +T +Q
Sbjct: 334 NDLDEKAKAEEQDKV----IQELHQLLSPFLLRRVKSDVEKSLLPKIETNVYTGMTDMQV 389
Query: 433 ELYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
Y + + V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 390 SWYKNLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT---- 444
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
D + SGKM +L ++L +Q R+++ S ++ LD
Sbjct: 445 --------------------DEHLIYNSGKMIILDKMLKKFKQEGS-RVLIFSQMSRVLD 483
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ C R Y Y R+DG+T+ R + ++ +N P ++F+FLL+++AGG G+NL +
Sbjct: 484 ILEDYCYFREYEYCRIDGSTAHEDRIEAIDEYNAPDSDKFIFLLTTRAGGLGINLTSADV 543
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQ 669
++L+D DWNP D QA R R GQKK+V +YRF++ IEEKV +R K L Q VIQ
Sbjct: 544 VILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVIQ 603
Query: 670 QEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESI 721
Q + ++ T N S++D DL ++ E T DD ESI
Sbjct: 604 QGRQANAGT--NVGSSKD--DLIEMIQHGAQKVFEEQKSTVV---DDDIESI 648
>gi|68479793|ref|XP_716066.1| hypothetical protein CaO19.7401 [Candida albicans SC5314]
gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Candida albicans SC5314]
Length = 1056
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 291/623 (46%), Gaps = 80/623 (12%)
Query: 158 LWQPEEPQNDGGNL-VPITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D + +T P ++ LR +Q +G+ ++ L+ ILA
Sbjct: 110 LLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSG------ILA 163
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P I++ P S + NW E KW V ++
Sbjct: 164 DEMGLGKTLQTISFLGYLRYIKHIDG-PF----IVIVPKSTLDNWRREFAKWTPD-VNVV 217
Query: 274 ALCESTRDDVVSGI-DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLK 332
L + ++ S I D + VLI S+E S + ++ DEAHR+K
Sbjct: 218 VL-QGDKEQRASIIKDQLY--TAKFDVLITSFEMILREKSALQKFR-WEYIVVDEAHRIK 273
Query: 333 N-DQTLTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N D +L+ +N+L E +A++NF P + GD+ F ++
Sbjct: 274 NEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQ-- 331
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
E EE+++ + SEL ++ F+LRR A + L PKI V +T +Q E
Sbjct: 332 -NSEELDEEEKQRRQDKAVSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVE 390
Query: 434 LYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
Y + V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 391 WYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT----- 444
Query: 492 IRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
D V SGKM +L ++L + R+++ S ++ LD+
Sbjct: 445 -------------------DEHLVYNSGKMIILDKMLKKFKAEGS-RVLIFSQMSRVLDI 484
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
C R Y Y R+DG+TS R + ++ +N P +F+FLL+++AGG G+NL + +
Sbjct: 485 LEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIV 544
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ 670
+L+D DWNP D QA R R GQKK+V ++RF++ IEEKV +R K L Q VIQQ
Sbjct: 545 ILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQ 604
Query: 671 -EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNS 729
Q +S+ GN S +DL + E+ EN T DD E + G E +
Sbjct: 605 GRQMNSNNNVGN--SKDDLIGMIQHG---AKEVFENSKGTMLD--DDVEEILKRGAEKTA 657
Query: 730 ANKNDQSDQEVTDIGGFAGLAGC 752
N + + DI F A
Sbjct: 658 ELNNKFNKLGLDDIQNFTSDASA 680
>gi|238881028|gb|EEQ44666.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans
WO-1]
Length = 1056
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 292/623 (46%), Gaps = 80/623 (12%)
Query: 158 LWQPEEPQNDGGNL-VPITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D + +T P ++ LR +Q +G+ ++ L+ ILA
Sbjct: 110 LLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSG------ILA 163
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P I++ P S + NW E KW V ++
Sbjct: 164 DEMGLGKTLQTISFLGYLRYIKHIDG-PF----IVIVPKSTLDNWRREFAKWTPD-VNVV 217
Query: 274 ALCESTRDDVVSGI-DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLK 332
L + ++ S I D + VLI S+E S + ++ DEAHR+K
Sbjct: 218 VL-QGDKEQRASIIKDQLY--TAKFDVLITSFEMILREKSALQKFR-WEYIVVDEAHRIK 273
Query: 333 N-DQTLT---------NR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N D +L+ NR N+L E +A++NF P + GD+ F ++
Sbjct: 274 NEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQ-- 331
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
E EE+++ + SEL ++ F+LRR A + L PKI V +T +Q E
Sbjct: 332 -NSEELDEEEKQRRQDKAVSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVE 390
Query: 434 LYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
Y + V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 391 WYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT----- 444
Query: 492 IRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
D V SGKM +L ++L + R+++ S ++ LD+
Sbjct: 445 -------------------DEHLVYNSGKMIILDKMLKKFKAEGS-RVLIFSQMSRVLDI 484
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
C R Y Y R+DG+TS R + ++ +N P +F+FLL+++AGG G+NL + +
Sbjct: 485 LEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIV 544
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ 670
+L+D DWNP D QA R R GQKK+V ++RF++ IEEKV +R K L Q VIQQ
Sbjct: 545 ILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQ 604
Query: 671 -EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNS 729
Q +S+ GN S +DL + E+ EN T DD E + G E +
Sbjct: 605 GRQMNSNNNVGN--SKDDLIGMIQHG---AKEVFENSKGTMLD--DDVEEILKRGAEKTA 657
Query: 730 ANKNDQSDQEVTDIGGFAGLAGC 752
N + + DI F A
Sbjct: 658 ELNNKFNKLGLDDIQNFTSDASA 680
>gi|2213862|gb|AAC47719.1| PfSNF2L [Plasmodium falciparum]
Length = 1422
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 275/540 (50%), Gaps = 91/540 (16%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
++P+Q EG+ ++++ +N ILAD+MGLGKTLQ+I+LL C K +
Sbjct: 319 MKPYQLEGLNWLYQLYRFKING------ILADEMGLGKTLQTISLL----CYLRFNKNIK 368
Query: 244 KKAIIVTPTSLVSNWEAEIKKW---------VGGRVQLIALCESTRDDVVSGIDSFTDPC 294
KK+II+ P S + NW EIKKW G + Q L R+ + S D
Sbjct: 369 KKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKEL---NRNLLHSDFD------ 419
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---- 340
VL+ +YE S + L+ DEAHR+KN++++ NR
Sbjct: 420 ----VLLTTYEIVIKDKSALYDIDWF-FLVIDEAHRIKNEKSVLSSSVRFLRSENRLLIT 474
Query: 341 -----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
N+L+E ++++NF P I ++ F + S I + +E ++L
Sbjct: 475 GTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSE--------IITQL 526
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
+ F+LRR + LPPK + ++ LQ +LY+ I SKN+ + ++
Sbjct: 527 HTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSD-ILSKNIDVLNAMTGSKN 585
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
++L + L+K CNHP L +D I+ PP + G+ +
Sbjct: 586 QMLNILMQLRKCCNHPYL-FDGIEE---------------PP---------YIEGNHL-I 619
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
E SGKM +L +LL L+ + + R++L S T+ LD+ CR + YPYLR+DG+T +R
Sbjct: 620 ETSGKMSLLDKLLPRLK-KENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDER 678
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
Q +N FN+P+ F+FLLS++AGG G+NL + ++LFD D+NP D QA R R GQ
Sbjct: 679 QVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQ 738
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSATQGNFLSTEDLRDLFTF 694
KKRV +YRF++ ++EEK+ +R K L +IQ+ + + ++ + N + ++L D+ F
Sbjct: 739 KKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSAKEN--NKQELHDILNF 796
>gi|241953595|ref|XP_002419519.1| ISWI chromatin-remodeling complex ATPase, putative [Candida
dubliniensis CD36]
gi|223642859|emb|CAX43114.1| ISWI chromatin-remodeling complex ATPase, putative [Candida
dubliniensis CD36]
Length = 1054
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 188/624 (30%), Positives = 293/624 (46%), Gaps = 82/624 (13%)
Query: 158 LWQPEEPQNDGGNL-VPITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D + +T P ++ LR +Q +G+ ++ L+ ILA
Sbjct: 108 LLQDEEHQDDEDHQHTVLTESPSYIKEGKLREYQIQGLNWLISLYENRLSG------ILA 161
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P I++ P S + NW E KW V ++
Sbjct: 162 DEMGLGKTLQTISFLGYLRYIKHIDG-PF----IVIVPKSTLDNWRREFAKWTPD-VNVV 215
Query: 274 ALC--ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
L + R +++ D + VLI S+E S + ++ DEAHR+
Sbjct: 216 VLQGDKEQRANIIK--DQLY--TAKFDVLITSFEMILREKSALQKF-RWEYIVVDEAHRI 270
Query: 332 KN-DQTLT---------NR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN D +L+ NR N+L E +A++NF P + GD+ F ++
Sbjct: 271 KNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQ- 329
Query: 373 ICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQS 432
E E+++K + EL ++ F+LRR A + L PKI V +T +Q
Sbjct: 330 --NTEELDEEQKQKKQDKAVQELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQV 387
Query: 433 ELYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFED 490
E Y + V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 388 EWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT---- 442
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
D V SGKM +L ++L + R+++ S ++ LD
Sbjct: 443 --------------------DEHLVYNSGKMIILDKMLKKFKAEGS-RVLIFSQMSRVLD 481
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+ C R Y Y R+DG+TS R + ++ +N P+ ++F+FLL+++AGG G+NL +
Sbjct: 482 ILEDYCYFREYEYCRIDGSTSHEDRIEAIDEYNAPNSDKFIFLLTTRAGGLGINLTSADI 541
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQ 669
++L+D DWNP D QA R R GQKK+V ++RF++ IEEKV +R K L Q VIQ
Sbjct: 542 VILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQ 601
Query: 670 Q-EQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHENMHCTRCQNYDDGAESIGEGDETN 728
Q Q +S+ GN S +DL + E+ EN T DD E + G E
Sbjct: 602 QGRQMNSNNNVGN--SKDDLIGMIQHG---AKEVFENSKGTMLD--DDVEEILKRGAEKT 654
Query: 729 SANKNDQSDQEVTDIGGFAGLAGC 752
+ N + + D+ F A
Sbjct: 655 AELNNKFNKLGLDDVQNFTSDASA 678
>gi|396491459|ref|XP_003843573.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
gi|312220152|emb|CBY00094.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
Length = 1224
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 276/585 (47%), Gaps = 103/585 (17%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DGG +P + P L + Q+ GVQ+++E S + G I+ D+MGLGKT+Q+I
Sbjct: 402 DGGFRIPGDIYPALFDY----QKTGVQWLWELYSQNV------GGIIGDEMGLGKTIQAI 451
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI-----ALCESTR 280
+ + L K + K I+V P +++ W E +W RV ++ + ++ R
Sbjct: 452 SFVAGLHYS----KLLTKPVIVVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTQR 507
Query: 281 DDVVS---GIDSFTDPCSSL------------------QVLIVSYETFRMHSSKFSCSES 319
+D + + S+ D ++L VL+ +Y + +S +F
Sbjct: 508 EDRMERELELRSYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYS-EFLIPTE 566
Query: 320 CDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGD 360
+ I DE H+++N T +N+L E +++ +F P LG
Sbjct: 567 WECAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGT 626
Query: 361 AAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKII 420
FR +E I G A+ E + + + L V+ ++L+R ++ LP K
Sbjct: 627 LVNFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKVDVATDLPQKKE 686
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
+V+ CKLT Q Y F+ S ++K +I++ + +L + L+K+CNHP L I S
Sbjct: 687 QVLFCKLTRQQRAAYEGFLASNDMK-SITDGKRN--MLFGVDYLRKVCNHPDLTEHKILS 743
Query: 481 GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
PG D SGKM V+ LL L ++ + +
Sbjct: 744 KKPGY-------------------------DYGAPNRSGKMQVVKELLS-LWKKGGHKTL 777
Query: 541 LVSNYTQTLDLFAQLCRERRYP---YLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSK 597
L + + LD+ + P + R+DG T I +RQ LV+ FN+ + + VFLL++K
Sbjct: 778 LFAQHRIMLDILQKFVSH--LPGINWRRMDGETPIKERQNLVDEFNN-NPDLDVFLLTTK 834
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
GG G+NL G NR++++DPDWNP+ D QA R WR GQK+ V IYR +S GTIEEK+Y R
Sbjct: 835 VGGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHR 894
Query: 658 QMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE 701
Q+ K+ L KV++ + Q DL DLFT ++ E
Sbjct: 895 QIFKQFLTNKVLKDPK------QRQTFQMSDLHDLFTLGENTEGE 933
>gi|119592220|gb|EAW71814.1| FLJ20105 protein, isoform CRA_b [Homo sapiens]
Length = 1080
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 249/506 (49%), Gaps = 70/506 (13%)
Query: 217 MGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC 276
MGLGKT+Q IA L + FD +V +++ PT+L++ W E KW G +++
Sbjct: 1 MGLGKTVQIIAFLSGM----FDAS-LVNHVLLIMPTNLINTWVKEFIKWTPG-MRVKTFH 54
Query: 277 ESTRDDVVSGIDSFTDP----CSSLQVLIVSYETFRMHSSKFSCSESC-DLLICDEAHRL 331
++D+ ++ ++ Q+LI +++ S F E D +I DEAH++
Sbjct: 55 GPSKDERTRNLNRIQQRNGVIITTYQMLINNWQQL----SSFRGQEFVWDYVILDEAHKI 110
Query: 332 KNDQT----------LTNR---------NDLEEFFAMVNFTNPG-ILGDAAYFRRYYETS 371
K T +NR N+L+E +++ +F G +LG F+ YE
Sbjct: 111 KTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENP 170
Query: 372 IICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQ 431
I RE AT EK LG + S L A + + LRRT + +I + +L PLQ
Sbjct: 171 ITRAREKDATPGEKALGFKISENLMAIIKPYFLRRTKEDVQKKKKNDLI--IWIRLVPLQ 228
Query: 432 SELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC 491
E+Y F+ ++K + E LA + LKKLC+HP+L+ + D
Sbjct: 229 EEIYRKFVSLDHIKELLMETRSP---LAELGVLKKLCDHPRLL---------SARAYVDH 276
Query: 492 IRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
I D +E SGKM L LL LR +V S Q L++
Sbjct: 277 ID--------------QVTDDTLMEESGKMIFLMDLLKRLRDEGHQTLVF-SQSRQILNI 321
Query: 552 FAQLCRERRYPYLRLDGT-TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
+L + R + LR+DGT T + +R+K +N F +K+ VFLL+++ GG GL L R
Sbjct: 322 IERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQ-NKDYSVFLLTTQVGGVGLTLTAATR 380
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQ 670
+V+FDP WNPA D QA RV+R GQK+ V +YR ++ GT+EEK+Y+RQ+ K+ L +
Sbjct: 381 VVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIR---- 436
Query: 671 EQTDSSATQGNFLSTEDLRDLFTFHD 696
+ T + S ++LR+LFT D
Sbjct: 437 QTTGEKKNPFRYFSKQELRELFTIED 462
>gi|328772759|gb|EGF82797.1| hypothetical protein BATDEDRAFT_9561, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 912
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 191/677 (28%), Positives = 305/677 (45%), Gaps = 133/677 (19%)
Query: 87 RKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGSSRP-----VLVTITNRLDLPRTVENN 141
RK ++ Y + D+L+ R+R W R +L+ + ++++
Sbjct: 159 RKKLHRMDADRYKDDGDELS----YRRRLTKWAIERRKKRENLLLGDNADEKMTEQLDDD 214
Query: 142 VIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSG 201
V +E F +P ++++ E G VP V R L P+QR V++++E
Sbjct: 215 VEKEIF------EPSLVYEDEVIHK--GYCVPGDV----YRHLFPYQRTCVKWLWELYCQ 262
Query: 202 LLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAE 261
+ G ++ D+MGLGKT+Q I+ L L GF + + IIV P +++ W E
Sbjct: 263 EV------GGLVGDEMGLGKTIQIISFLAGL---GF-SRLLKGPVIIVCPATVLRQWVQE 312
Query: 262 IKK-WVGGRVQLIALCES-------TRDDVVSGI-----------------------DSF 290
K W RV ++ S RD + + D+
Sbjct: 313 FHKWWPPFRVAILHSTGSGLGSEAHDRDSESTYMSDESEENEYFLDKKRPKKKGKRSDTL 372
Query: 291 TDPCSSL--------------QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQ 335
P S VL+ +Y R+H+ + DE H+++N D
Sbjct: 373 HYPIKSKSKARALVANIVKNGHVLVTTYAAIRIHADIL-LPVKWAYCVLDEGHKIRNPDS 431
Query: 336 TLTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGRE 377
+T +N+L E +++ +F PG LG F+ + T I G
Sbjct: 432 EVTMACKRFKTPHRIILSGTPIQNNLIELWSIYDFVFPGRLGTLPVFQTQFATPINLGGY 491
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNH 437
A + + + + L ++ ++LRR + ++ LP K +V+ C+L+ Q Y
Sbjct: 492 ANANNVQVQTAYKCACILRDMISPYLLRRMKSDVATDLPKKSEQVLFCRLSDAQRREYEK 551
Query: 438 FIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP 497
F+ SK +K + + + ILA I L+K+CNHP D ++ N
Sbjct: 552 FLSSKELKGILEGKLR---ILAGIDVLRKICNHP----DLLERNNAD------------- 591
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
FS G+ V SGKM V+ LL + +R R++L Q LD+ +
Sbjct: 592 --FSANYGA--------VSRSGKMIVVKALL-QMWKRQGHRVLLFCQTRQMLDILELFIK 640
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
Y YLR+DG+TSI +R K+V+ +N+ ++ FVFLL++K GG G+NL NR+++FDPD
Sbjct: 641 NEGYAYLRMDGSTSIQQRSKIVDCYNE-DESYFVFLLTTKVGGLGINLTSANRVIIFDPD 699
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
WNP+ D QA R WR GQKK V IYR +++GTIEEK+Y RQ+ K+ L I ++
Sbjct: 700 WNPSTDMQARERAWRLGQKKSVTIYRLMTSGTIEEKIYHRQIFKQFLTNKILKD-----P 754
Query: 678 TQGNFLSTEDLRDLFTF 694
Q F + DL DLF
Sbjct: 755 RQRRFFKSNDLHDLFML 771
>gi|124803472|ref|XP_001347729.1| PfSNF2L [Plasmodium falciparum 3D7]
gi|23495979|gb|AAN35642.1|AE014836_39 PfSNF2L [Plasmodium falciparum 3D7]
Length = 1426
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 275/540 (50%), Gaps = 91/540 (16%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
++P+Q EG+ ++++ +N ILAD+MGLGKTLQ+I+LL C K +
Sbjct: 322 MKPYQLEGLNWLYQLYRFKING------ILADEMGLGKTLQTISLL----CYLRFNKNIK 371
Query: 244 KKAIIVTPTSLVSNWEAEIKKW---------VGGRVQLIALCESTRDDVVSGIDSFTDPC 294
KK+II+ P S + NW EIKKW G + Q L R+ + S D
Sbjct: 372 KKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKEL---NRNLLHSDFD------ 422
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---- 340
VL+ +YE S + L+ DEAHR+KN++++ NR
Sbjct: 423 ----VLLTTYEIVIKDKSALYDIDWF-FLVIDEAHRIKNEKSVLSSSVRFLRSENRLLIT 477
Query: 341 -----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
N+L+E ++++NF P I ++ F + S I + +E ++L
Sbjct: 478 GTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSE--------IITQL 529
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
+ F+LRR + LPPK + ++ LQ +LY+ I SKN+ + ++
Sbjct: 530 HTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSD-ILSKNIDVLNAMTGSKN 588
Query: 456 KILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
++L + L+K CNHP L +D I+ PP + G+ +
Sbjct: 589 QMLNILMQLRKCCNHPYL-FDGIEE---------------PP---------YIEGNHL-I 622
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
E SGKM +L +LL L+ + + R++L S T+ LD+ CR + YPYLR+DG+T +R
Sbjct: 623 ETSGKMSLLDKLLPRLK-KENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDER 681
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
Q +N FN+P+ F+FLLS++AGG G+NL + ++LFD D+NP D QA R R GQ
Sbjct: 682 QVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQ 741
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSATQGNFLSTEDLRDLFTF 694
KKRV +YRF++ ++EEK+ +R K L +IQ+ + + ++ + N + ++L D+ F
Sbjct: 742 KKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSAKEN--NKQELHDILNF 799
>gi|385302472|gb|EIF46602.1| dna repair and recombination protein rad54 [Dekkera bruxellensis
AWRI1499]
Length = 567
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 190/319 (59%), Gaps = 31/319 (9%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E+P + N VP+ +DP L + LRPHQ GV+F++ C SG+++A CI+AD+MGLGK
Sbjct: 246 EDPSSKFPN-VPVVIDPKLAKVLRPHQISGVKFLYRCTSGMVDAKAXX-CIMADEMGLGK 303
Query: 222 TLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTR 280
TLQ + L++TL+ QG G+ + K IIV P+SLV NW EI KW+G G ++ +A+ +
Sbjct: 304 TLQCLTLMWTLMKQGPRGRKTINKCIIVCPSSLVRNWANEIDKWLGKGSLKYLAMDGRST 363
Query: 281 DDVVSGIDSFTDPCSS------LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKND 334
+ G D+ T ++ VLI+SYET R + C L++ DE HRLKN
Sbjct: 364 KGITVG-DALTRWANAKGSSIVTPVLIISYETLRRNIMHLDC--EVGLILADEGHRLKNG 420
Query: 335 QTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICG 375
+LT +NDL E+F+++ F NPG+LG A FR+ YE I+ G
Sbjct: 421 DSLTFNALNSLNCTRRVILSGTPIQNDLSEYFSLLTFANPGLLGSRAEFRKDYELDILRG 480
Query: 376 REPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELY 435
R+ AT+ E++ G ++ +L+ V++FI+RRTN +LS +LP K V+ C+L+ LQ +LY
Sbjct: 481 RDSLATDXEREKGDQKLRDLTDVVSRFIIRRTNDILSKYLPVKYEYVIFCELSDLQKKLY 540
Query: 436 NHFIHSKNVKRAISEETKQ 454
+F+ S +KR + + Q
Sbjct: 541 KYFLTSPEIKRLMRGQHSQ 559
>gi|255729544|ref|XP_002549697.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
gi|240132766|gb|EER32323.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
Length = 1024
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 262/537 (48%), Gaps = 77/537 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LRP+Q +G+ ++ N +GI LAD+MGLGKTLQ+I+ L Y +G +G +
Sbjct: 133 LRPYQIQGLNWLISLYEN--NLSGI----LADEMGLGKTLQTISFLGYLRYMRGINGPHL 186
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V +TP S + NW+ E +W+ ++++ L + +D+ I S C ++I
Sbjct: 187 V-----ITPKSTLDNWQREFNRWIPD-IKVLVL-QGDKDERAELIKSKVMQCE-FDIIIA 238
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
SYE S + + ++ DEAHR+KN+++L ++ N+L
Sbjct: 239 SYEIVIREKSTLKKFD-WEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNL 297
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + D F +++ +E E++ K+ S+L + F+
Sbjct: 298 RELWALLNFILPDVFADNESFDEWFQ------KEDQEEEDQDKV----ISQLHKVLKPFL 347
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILAYI 461
LRR A + L PK V K+ P+Q LY + V + ++ ++++L +
Sbjct: 348 LRRIKADVEKSLLPKKELNVYVKMAPMQKNLYKKILEKDIDAVNGSNGKKESKTRLLNIV 407
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
L+K CNHP L ++ ++ G P TT D V S KM
Sbjct: 408 MQLRKCCNHPYL-FEGMEPGPPYTT------------------------DEHLVFNSQKM 442
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L ++L +Q R+++ S ++ LD+ C R Y Y R+DG T S R ++
Sbjct: 443 LILDQMLKKFQQEGS-RVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHSDRINAIDE 501
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
+N P +FVFLL+++AGG G+NL + ++LFD DWNP D QA R R GQ K+V +
Sbjct: 502 YNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKV 561
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN----FLSTEDLRDLFTF 694
+RF++ IEEKV +R K L +++ Q+ ++ G S +L DL F
Sbjct: 562 FRFITENAIEEKVLERATQKLRLDQLVIQQGRNTGGLDGQQSSKAASKNELLDLIQF 618
>gi|302789546|ref|XP_002976541.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii]
gi|300155579|gb|EFJ22210.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii]
Length = 788
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 163/554 (29%), Positives = 268/554 (48%), Gaps = 73/554 (13%)
Query: 183 FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM 242
L HQ EG+++++ G IL DDMGLGKT+Q A L C F K +
Sbjct: 76 ILYEHQHEGLRWLWRL------HLQRRGGILGDDMGLGKTMQIAAFL----CGLFHSK-L 124
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID----SFTDPCSSLQ 298
+K+A+IV P +L+ +W G + ++ L +D + I + +
Sbjct: 125 IKRALIVAPKTLIPHW--------GKELNVVGLGRKVKDYSGTSISVRESNLDRILQAGG 176
Query: 299 VLIVSYETFRMHSSKFSCSE-------SCDLLICDEAHRLKNDQTLTNR----------- 340
VL+ +Y+ R +++ + D +I DE H +KN T +
Sbjct: 177 VLLTTYDIVRHNTNALKGEYNFDDDDVTWDYVILDEGHLIKNPSTQRAKSLKEIPSAHRI 236
Query: 341 --------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
N+L E +A+ +F P +LGD F+ YET I+ G + AT+ +K++G +
Sbjct: 237 IISGTPIQNNLREMWALFDFCYPELLGDRKEFKAKYETMILSGNDKNATDRQKRIGAAVA 296
Query: 393 SELSAKVNQFILRRTNALL-------SNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK 445
EL + + LRR + + L K +V +L+ Q ++Y F+ S+ +
Sbjct: 297 QELQDRFAPYFLRRLKKDVFPNTGEETQQLAKKNDIIVWLRLSQRQRQMYTAFLRSETAQ 356
Query: 446 RAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE--DCIRFFPPEM---- 499
+++ K S LA +T LKK+C+HP L+ T ++ + G E D E
Sbjct: 357 GSLAGSAKGSA-LAALTILKKICDHPLLL--TKRATDDVVEGLEYLDSTDIAAAEAMRKS 413
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRER 559
+G + DG + S K+ L LL +L Q R ++ + + LD+ + +R
Sbjct: 414 LAGLAEPEPDSDGN--KHSCKIVFLMALLENLVQE-GHRTLVFAQTLKMLDIIQEEITKR 470
Query: 560 RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWN 619
RY + R+DG T S+RQ++V F +FLL+S+ GG GL L +R+V+ DP WN
Sbjct: 471 RYSFCRIDGKTKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTAADRVVIVDPAWN 530
Query: 620 PANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQ 679
P+ D Q+ R +R GQ + V +YR +++GT+EEK+Y++Q+ K GL KV + A Q
Sbjct: 531 PSKDNQSVDRAYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMKVATER-----AEQ 585
Query: 680 GNFLSTEDLRDLFT 693
+ S +D R+L T
Sbjct: 586 FRYFSQQDFRELLT 599
>gi|70982085|ref|XP_746571.1| DNA repair protein Rhp26/Rad26 [Aspergillus fumigatus Af293]
gi|66844194|gb|EAL84533.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
Af293]
gi|159122195|gb|EDP47317.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
A1163]
Length = 1214
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 185/659 (28%), Positives = 300/659 (45%), Gaps = 123/659 (18%)
Query: 96 NGYDNGNDQL---------ARRLCARKRFVPWGSSRPVLVTITNRLDLPRTVENNVIEEN 146
+G D+G+++L +RR ARKR +S+ + T + + E+
Sbjct: 341 SGLDDGDERLYQSRLQSWVSRRSAARKR-----ASKALQATEGHESTIDEQASTE--EDE 393
Query: 147 FTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAA 206
+ LP P V + D G +P ++P +L +Q+ GVQ+++E +
Sbjct: 394 WFLPHPTVPDVSY-------DNGYRLPGDLNP----YLFDYQKTGVQWLWELYQQKV--- 439
Query: 207 GIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW- 265
G I+ D+MGLGKT+Q+IA L L K + + I+V P +++ W E +W
Sbjct: 440 ---GGIIGDEMGLGKTIQAIAFLAGLHY----SKKLDRPVIVVCPATVMKQWVNEFHRWW 492
Query: 266 ---------VGGRVQLIALCESTRDDVV---------SGIDSFTDPCSSL--------QV 299
G + ES+R+D + GI S + V
Sbjct: 493 PPFRVSILHTSGSGMVNIRSESSREDALLSQTYSSNSRGITSNQKAARKVVKRVVEEGHV 552
Query: 300 LIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN-------------------R 340
L+ +Y + +S F I DE H+++N T +
Sbjct: 553 LVTTYSGLQTYS-HFLIPVEWGCAILDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQ 611
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N+L E +++ +F P LG FR +E I G A+ + + + + L ++
Sbjct: 612 NNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAIS 671
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAY 460
++L+R ++ LP K +V+ CKLT Q Y F+ S+ ++ + + +IL
Sbjct: 672 PYLLQRFKIDVAADLPKKTEQVLFCKLTKPQRMAYESFLKSEEMESILK---GRRQILYG 728
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
+ L+K+CNHP L ++S +G+ + + SGK
Sbjct: 729 VDILRKICNHPDLQNHKMQSHQ---SGYGNANK------------------------SGK 761
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTTSISKRQKLV 579
M V+ LL L + T + +L + + LD+ + R + Y R+DGTT I RQ +V
Sbjct: 762 MQVVKSLL-ELWRDTGHKTLLFAQHRIMLDILEKFVRSLSGFNYRRMDGTTPIQNRQTMV 820
Query: 580 NHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
+ FN DP N VFLL++K GG G+NL G +R++++DPDWNP+ D QA R WR GQK+
Sbjct: 821 DEFNNDP--NIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRD 878
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
V +YR ++ GTIEEK+Y RQ+ K+ L I + D Q +F DL DLF D+
Sbjct: 879 VSVYRLMTAGTIEEKIYHRQIFKQFLTNKILR---DPKQRQTSF-QLSDLYDLFALGDE 933
>gi|351708119|gb|EHB11038.1| DNA repair and recombination protein RAD54-like protein
[Heterocephalus glaber]
Length = 241
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 158/245 (64%), Gaps = 16/245 (6%)
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
LKKLCNHP LI+D GFE + FPP +S +S +LSGKM V
Sbjct: 12 LKKLCNHPALIHDKCVEEE---DGFEGALDIFPPG-YSSKSIE--------PQLSGKMLV 59
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +L + + D++VLVSNYTQTLDLF +LC+ +RY Y+RLDGT SI KR K+V F
Sbjct: 60 LDYILAVTQSCSSDKVVLVSNYTQTLDLFEKLCQMQRYFYVRLDGTMSIKKRAKVVERFY 119
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
PS +FVF+LSSKAGGCGLNL G NRLV+FDPDWNPAND+QA A+VW DGQKK +IY
Sbjct: 120 SPSSPDFVFMLSSKAGGCGLNLTGANRLVMFDPDWNPANDEQAMAQVWCDGQKKTWYIYH 179
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
LS TI+EK++Q Q K+ L+ + ++ D + +F S L++LF + S+ H
Sbjct: 180 LLSAETIKEKIFQWQSHKKALRSCVVDKEQD---VEWHF-SLGQLKELFILDEASLSDTH 235
Query: 704 ENMHC 708
+ + C
Sbjct: 236 DRLQC 240
>gi|412988921|emb|CCO15512.1| DNA repair and recombination protein RAD26 [Bathycoccus prasinos]
Length = 1189
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 170/589 (28%), Positives = 272/589 (46%), Gaps = 108/589 (18%)
Query: 157 VLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFE--CVSGLLNAAGIHGCILA 214
V+ E+ + +GG ++VD L PHQ+ V++++E C G I+
Sbjct: 353 VIEAEEDVEFEGG----LSVDGDRFAKLLPHQKTAVKWLWELHCQRA--------GGIIG 400
Query: 215 DDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA 274
D+MGLGKT+Q A L L + + +++V P +++ W E+K W ++ +
Sbjct: 401 DEMGLGKTVQVAAFLGAL-----SKSNLYQASVVVCPATMLRQWRRELKIW-APELKPVV 454
Query: 275 LCEST-------------RDDVVSGIDSFT-DPCSSLQVLIVSYETFRMHSSKFSCSESC 320
L +S ++ + + I + T DP ++I +YE R +
Sbjct: 455 LHDSAITQDALKVANGNRKNAMKNAIRNATRDPKG---LVITTYECLRGMREDL-LTVRW 510
Query: 321 DLLICDEAHRLKN---DQTLTNR----------------NDLEEFFAMVNFTNPGILGDA 361
+ DE H+++N D T+ ++ N L E +++++F PG LG
Sbjct: 511 GYAVLDEGHKIRNPEADITVVSKRLRTVHRIIMTGAPVQNRLSELWSLIDFVYPGKLGTL 570
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
F+ + I G A+++ + L ++ ++LRR L +LP K +
Sbjct: 571 PVFQAQFAVPIQIGGYVNASDQAATTAYRCAVALKDLISPYLLRRLKQDLDINLPDKTEQ 630
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
V+ C +T Q + Y F+ S+ V+ I + + L I L+K+ NHP L+ ++
Sbjct: 631 VLFCPMTENQRDAYKGFLSSREVEDIID---GRREALGGIDVLRKIVNHPDLLE---RNS 684
Query: 482 NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVL 541
G + D +R SGK+ V ++L + + R ++
Sbjct: 685 RAGDANYGDPVR------------------------SGKLQVALKILSMWKSQ-GHRCLV 719
Query: 542 VSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPS-------------KN 588
S Q LD+ Q Y Y R+DGTT ++ R LV+ FND +
Sbjct: 720 FSQTQQMLDILEQAVANEGYTYRRMDGTTPVAHRMGLVDSFNDAGNVGEEGVAAEDMQEP 779
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
FVFLL++K GG G+NL G NR++LFDPDWNP+ D QA R WR GQ K V IYR ++TG
Sbjct: 780 VFVFLLTTKVGGLGINLTGANRVLLFDPDWNPSTDAQARERAWRIGQTKAVTIYRLITTG 839
Query: 649 TIEEKVYQRQMSKEGLQ-KVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
TIEEKVY RQ+ KE L KV++ + Q F D+ DLF + D
Sbjct: 840 TIEEKVYHRQIYKEFLTGKVLKDPK------QRRFFKARDMMDLFAYDD 882
>gi|196008861|ref|XP_002114296.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
gi|190583315|gb|EDV23386.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
Length = 616
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 270/562 (48%), Gaps = 83/562 (14%)
Query: 182 RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKP 241
R+LR +QREG+QF++ N G IL DDMGLGKT+Q I + +L + +
Sbjct: 41 RYLREYQREGIQFLYN------NYKANRGSILGDDMGLGKTVQIIGFIAAVLNKSGTKED 94
Query: 242 MVKKA---------------IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
++KK +IV+P S++ NW E+ W G ++ S +D+ +
Sbjct: 95 VMKKLWWKSSPSPTNKRQSFLIVSPGSVLYNWIDELNTW--GHFKVGRFHASHKDETLQQ 152
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT---------- 336
++ L V++ ++ET R + + S +I DEAHRLK+ ++
Sbjct: 153 LEK-----GRLDVVLTTFETLRNYLDDLN-SFKWLAVIVDEAHRLKDGKSKVTIAMKNIK 206
Query: 337 ------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
LT +N L EF+ ++++ NPG LG F++ YE+ I GR+ T+ E
Sbjct: 207 CRRRIGLTGTAMQNRLSEFWCLLDWANPGCLGTLGTFQKDYESPIKQGRKFNVTKRELAN 266
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV--- 444
+S EL+ +Q+ LRRT AL++ LP K +VV C L+ LQ+ LY + + +V
Sbjct: 267 SNLKSEELTKLHSQWFLRRTKALIAEQLPKKDEKVVFCYLSELQNNLYEELLKNSDVDLI 326
Query: 445 --------------------KRAISEETKQSKILAYITALKKLCNHPKLIY-DTIKSGNP 483
+ I E S ++ Y+ K+ NH L+ ++ +S
Sbjct: 327 VRQSEPCDCGSKKNRGKCCYQTNIKGEKINSLLMQYLQLFLKVANHVALLLPNSNQSEEQ 386
Query: 484 GTTGFEDCIRFFP--PEM--FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
E C+R + P+ S + T D + GKM L LL + + ++
Sbjct: 387 RNKAREICVRMYSNFPQFKSISSNASLLTLSDPLYC---GKMKALEALLIKFK-KDGSKV 442
Query: 540 VLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKA 598
+L S Q L++ + Y RLDG T I +R +V FN DP + + L+S+KA
Sbjct: 443 LLFSYSVQLLNILETYIMCKGINYCRLDGNTRIEQRADIVRKFNNDPQIS--LCLISTKA 500
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
G GLN G N +++FDP+WNPA+D QA R +R GQ+ V +YR +++GTIEE +Y RQ
Sbjct: 501 GSLGLNFTGANSVLIFDPNWNPAHDLQAQDRAYRIGQRCDVRVYRLITSGTIEEVMYLRQ 560
Query: 659 MSKEGLQKVIQQEQTDSSATQG 680
+ K L V Q + G
Sbjct: 561 IYKLQLANVAMQNSKERRYFTG 582
>gi|302783170|ref|XP_002973358.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii]
gi|300159111|gb|EFJ25732.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii]
Length = 710
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 270/553 (48%), Gaps = 73/553 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L HQ EG+++++ G IL DDMGLGKT+Q A L C F K ++
Sbjct: 11 LYEHQHEGLRWLWRL------HLQRRGGILGDDMGLGKTMQIAAFL----CGLFHSK-LI 59
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRD---DVVSGIDSFTDPCSSLQ-V 299
K+A+IV P +L+ +W G + ++ L +D +S +S D + V
Sbjct: 60 KRALIVAPKTLIPHW--------GKELNVVGLGRKVKDYSGTSISVRESNLDRILQVGGV 111
Query: 300 LIVSYETFRMHSSKFSCSE-------SCDLLICDEAHRLKNDQTLTNR------------ 340
L+ +Y+ R +++ + D +I DE H +KN T +
Sbjct: 112 LLTTYDIVRHNTNALKGEYNFDDDDVTWDYVILDEGHLIKNPSTQRAKSLKEIPSAHRII 171
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E +A+ +F P +LGD F+ YET I+ G + AT+ +K++G +
Sbjct: 172 ISGTPIQNNLREMWALFDFCYPELLGDRKEFKAKYETMILSGNDKNATDRQKRIGAAVAQ 231
Query: 394 ELSAKVNQFILRRTNALL-------SNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
EL + + LRR + + L K +V +L+ Q ++Y F+ S+ +
Sbjct: 232 ELQDRFAPYFLRRLKKDVFPNTGEETQQLAKKNDIIVWLRLSQRQRQMYTAFLRSETAQG 291
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFE--DCIRFFPPEM----F 500
+++ K S LA +T LKK+C+HP L+ T ++ + G E D E
Sbjct: 292 SLAGSAKGSA-LAALTILKKICDHPLLL--TKRATDDVVEGLEYLDSTDIAAAEAMRKSL 348
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERR 560
+G + DG + S K+ L LL +L Q R ++ + + LD+ + +RR
Sbjct: 349 AGLAEPEPDSDGN--KHSCKIVFLMALLENLVQE-GHRTLVFAQTLKMLDIIQEEITKRR 405
Query: 561 YPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNP 620
Y + R+DG T S+RQ++V F +FLL+S+ GG GL L +R+V+ DP WNP
Sbjct: 406 YSFCRIDGKTKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTAADRVVIVDPAWNP 465
Query: 621 ANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
+ D Q+ R +R GQ + V +YR +++GT+EEK+Y++Q+ K GL KV + A Q
Sbjct: 466 SKDNQSVDRAYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMKVATER-----AEQF 520
Query: 681 NFLSTEDLRDLFT 693
+ S +D R+L T
Sbjct: 521 RYFSQQDFRELLT 533
>gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
Length = 1117
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 262/546 (47%), Gaps = 87/546 (15%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
+Q+ GVQ++ E S + G I+ D+MGLGKT+Q+IA + L K + K
Sbjct: 355 YQKTGVQWLAELYSQNV------GGIVGDEMGLGKTVQAIAFIAALHY----SKKLTKPV 404
Query: 247 IIVTPTSLVSNWEAEIKKWVGG-RVQLIALCES---------TRDDVVSG-----IDSFT 291
IIV P +++ W E +W RV ++ S T ++ SG +
Sbjct: 405 IIVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHSGRRDKSVRKIV 464
Query: 292 DPCSSL-QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN----------DQTLTNR 340
D VL+ +Y + + + E D + DE H+++N + NR
Sbjct: 465 DRVVKHGHVLVTTYNGLQTYQDELLHVE-WDYAVLDEGHKIRNPNAEITVLCKELRTPNR 523
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
N+L E +++ +F P LG FR +E I G AT + L E+
Sbjct: 524 IILSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQI-LTAEK 582
Query: 392 SSE-LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
+E L ++Q++L+R ++ LP K V+ CK+T Q E Y F++S V + +S
Sbjct: 583 CAETLKEAISQYLLQRLKIDVAADLPSKTERVLFCKMTDRQLEAYKQFLNSDAVNQILS- 641
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ K L I L+K+CNHP LI P + + W G
Sbjct: 642 --ARRKSLYGIDILRKICNHPDLI---------------------DPHLQNKAGYDW--G 676
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ-LCRERRYPYLRLDGT 569
D E SGKM V+ LL + ++ + +L S L++ + L Y+R+DG
Sbjct: 677 DP---EKSGKMLVVRNLL-QIWKKLGHKTLLFSQSKMMLNVIEKFLGGLETVKYVRMDGE 732
Query: 570 TSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
TSI KRQ L++ FN DP + +FLL+++ GG G+NL G NR+++FDPDWNP+ D QA
Sbjct: 733 TSIEKRQSLIDQFNTDPEID--IFLLTTRTGGLGVNLTGANRIIIFDPDWNPSTDMQARE 790
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R WR GQ + V IYR ++ GTIEEK+Y RQ+ K+ + + ++ +A DL
Sbjct: 791 RAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLKDPKQRAA-----FDLSDL 845
Query: 689 RDLFTF 694
DLFTF
Sbjct: 846 YDLFTF 851
>gi|255726014|ref|XP_002547933.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
gi|240133857|gb|EER33412.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
Length = 1063
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 180/563 (31%), Positives = 275/563 (48%), Gaps = 83/563 (14%)
Query: 158 LWQPEEPQNDGGNL-VPITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D + +T P V+ LR +Q +G+ ++ L+ ILA
Sbjct: 111 LLQDEEHQDDEDHQHTVLTESPSYVKEGKLREYQVQGLNWLISLYEDRLSG------ILA 164
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P II+ P S + NW E KW V ++
Sbjct: 165 DEMGLGKTLQTISFLGYLRYIKHIDG-PF----IIIVPKSTLDNWRREFAKWTPD-VNVV 218
Query: 274 ALC--ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRL 331
L + R ++ +T + VLI S+E + ++ DEAHR+
Sbjct: 219 VLQGDKEGRAKIIKE-QLYT---AQFDVLITSFEMVLREKGALQKFR-WEYIVVDEAHRI 273
Query: 332 KN-DQTLTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSI 372
KN D +L+ +N+L E +A++NF P + GD+A F +E
Sbjct: 274 KNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSAQFDDAFEN-- 331
Query: 373 ICGREPT--ATEEEKKLGIERS-SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
+PT TEEEK+ +++ EL ++ F+LRR A + L PKI V +T
Sbjct: 332 ----QPTEDMTEEEKEKKQDQAIHELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTD 387
Query: 430 LQSELYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTG 487
+Q + Y + V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 388 MQVDWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT- 445
Query: 488 FEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQ 547
D V SGKM +L ++L + R+++ S ++
Sbjct: 446 -----------------------DEHLVFNSGKMIILDKMLKKFKAEGS-RVLIFSQMSR 481
Query: 548 TLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIG 607
LD+ C R Y Y R+DG+TS R ++ +N P +F+FLL+++AGG G+NL
Sbjct: 482 LLDILEDYCYFREYEYCRIDGSTSHEDRIDAIDEYNSPDSEKFIFLLTTRAGGLGINLTS 541
Query: 608 GNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QK 666
+ ++L+D DWNP D QA R R GQKK+V +YRF++ IEEKV +R K L Q
Sbjct: 542 ADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTEMAIEEKVLERAAQKLRLDQL 601
Query: 667 VIQQ-EQTDSSATQGNFLSTEDL 688
VIQQ Q +++ T GN S +DL
Sbjct: 602 VIQQGRQMNANNTIGN--SKDDL 622
>gi|116197901|ref|XP_001224762.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51]
gi|88178385|gb|EAQ85853.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51]
Length = 1129
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 186/639 (29%), Positives = 289/639 (45%), Gaps = 114/639 (17%)
Query: 135 PRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQF 194
PR E EE G+ P ++ E + G ++P ++ ++LR +Q GV+F
Sbjct: 156 PRLNERPQFEER----TGIKPCRPYEDIELEYSAG-VIPASI----AQYLRDYQIAGVKF 206
Query: 195 MFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGF---DGKPMVK------- 244
+ E GCIL DDMGLGKT+Q A L + D K M K
Sbjct: 207 LHE------RFVYQKGCILGDDMGLGKTVQVAAFLTAAFGKTAGERDAKLMRKMRRAGDQ 260
Query: 245 ---KAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLI 301
+ +IV P SL+ NW+ E+ +W G + + ++DV+ + L+++I
Sbjct: 261 WYPRVLIVCPGSLIQNWKNELHRW--GYWHVDTYHGAGKEDVLQAAKA-----GRLEIMI 313
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------ND 342
+Y T++ + E D ++ DE H LK+ ++ T + N
Sbjct: 314 TTYTTYKKMREAVNEVE-WDCVVADECHVLKDRRSETTQAMDCVNALCRIGLTGTAIQNK 372
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN-- 400
EE + ++N+TNPG G A + + G+ AT K+L I R++ N
Sbjct: 373 YEELWTLLNWTNPGHFGTRAEWGNTITKPLTVGQSHDATL--KQLSIARTTAKKLVQNLL 430
Query: 401 -QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK--RAISE------- 450
+F LRR L+++ LP K +VV C LT +Q E Y +F+ ++V + SE
Sbjct: 431 PEFFLRRMKTLIAHQLPRKSDKVVFCPLTDIQREAYQNFLEGEHVTFVNSASEPCDCGSG 490
Query: 451 --------------ETKQSKILAYITALKKLCNHPKLIY----DTIKSGNPGTTGFEDCI 492
++ + + I L+K+ NH L+ D N + CI
Sbjct: 491 RKSGWCCNKTLPDGKSWMNVVFPSIMTLQKISNHITLLIPSSADPNDKQNSELNALQTCI 550
Query: 493 RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLF 552
E++ R + E GK +L +LL D++++ S+ + L +
Sbjct: 551 PDDWKELYRNRDSMLNLANS---EFCGKWKILKKLL-RFWHENGDKVLVFSHSVRLLRIL 606
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
L Y LDGT S +RQK+V+ FN DPS +FVFL+S+KAGG GLN+ N++
Sbjct: 607 QHLFHNTSYNVSFLDGTLSYEERQKVVDDFNSDPS--QFVFLISTKAGGVGLNITSANKV 664
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV---- 667
V+FDP WNPA D QA R +R GQ + V ++R +S GTIEE VY RQ+ K+ +
Sbjct: 665 VIFDPHWNPAYDLQAQDRAYRIGQVRDVDVFRLVSAGTIEEIVYARQIYKQQQANIGYNA 724
Query: 668 ---------IQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
+QQ+ T G L +LF+FH D
Sbjct: 725 SNERRYFKGVQQDSTRKGEIFG-------LSNLFSFHGD 756
>gi|301095371|ref|XP_002896786.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108669|gb|EEY66721.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1092
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 259/553 (46%), Gaps = 78/553 (14%)
Query: 167 DGGNLVPITVDPLLVRF--LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ 224
D IT P +++F ++P+Q EG+ +M L+ +G++G ILAD+MGLGKTLQ
Sbjct: 134 DDARYTRITQQPSIIKFGTMKPYQLEGLNWMIR-----LHDSGVNG-ILADEMGLGKTLQ 187
Query: 225 SIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV 283
SI+LL Y +G +G II+ P S V NW E+K+W ++ S +
Sbjct: 188 SISLLAYLREARGIEGPH-----IIIVPKSTVGNWMRELKRWCPS-IKAFKFMGSKDERA 241
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--- 340
V T L++SYE + S + LLI DEAHR+KN+ + ++
Sbjct: 242 VQ---RETVVRQDFDALVLSYEVAIIEKSILQKIKWKYLLI-DEAHRVKNENSKLSKVVR 297
Query: 341 ----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
N+L E +A++NF P + D+ F ++ G+E
Sbjct: 298 EFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWFNVDEQEGQENVI---- 353
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+L + F+LRR A + + LPPKI + L+ +Q E Y +H
Sbjct: 354 --------KKLHTILRPFLLRRLKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDAT 405
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ + ++L + L+K+CNHP L + PG PP
Sbjct: 406 HLNAIGGSDRVRLLNILMQLRKVCNHPYLF----EGAEPG-----------PP------- 443
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
+ G W E GKM +L +LL L Q R+++ T +D+ R + Y
Sbjct: 444 --YQEGPHLW-ENCGKMTLLHKLLPKL-QAQGSRVLIFCQMTSMMDILEDYMRYFSHDYC 499
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDG+T R ++ FN+P ++F FLLS++AGG G+NL + ++LFD DWNP D
Sbjct: 500 RLDGSTKGEDRDNMMEEFNEPGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDL 559
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA R R GQ K V ++RF++ GT+EEK+ +R K L I Q+ A Q LS
Sbjct: 560 QAMDRAHRIGQTKIVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQ--GRLAQQNRKLS 617
Query: 685 TEDLRDLFTFHDD 697
++L + F D
Sbjct: 618 KDELMTMVRFGAD 630
>gi|190348362|gb|EDK40804.2| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC
6260]
Length = 1034
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 263/544 (48%), Gaps = 84/544 (15%)
Query: 174 ITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-Y 230
IT P ++ LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+IA L Y
Sbjct: 110 ITESPSYIKDGTLREYQIQGLNWLISLYENRLSG------ILADEMGLGKTLQTIAFLGY 163
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
+ DG P II+ P S + NW E +W V+ + L + +DD F
Sbjct: 164 LRYIKNIDG-PF----IIIVPKSTLDNWRREFARWT-PEVKAVVL-QGNKDDRA----EF 212
Query: 291 TDPC---SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN------- 339
C + VLI S+E S+ ++ DEAHR+KN D +L+
Sbjct: 213 IKNCLLQADFDVLITSFEMVMREKSQLKKFR-WQYIVVDEAHRIKNEDSSLSQIIRLFYS 271
Query: 340 -----------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+N+L E +A++NF P + GD+ F ++E+ G + +++
Sbjct: 272 KNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFESQ---GSKEEGNQDKV--- 325
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS--KNVKR 446
+L ++ F+LRR + + L PKI V C +T +Q Y + V
Sbjct: 326 ---VQQLHKVLSPFLLRRVKSDVETSLLPKIETNVYCGMTEMQIRWYKKLLEKDIDAVNG 382
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ + ++++L + L+K CNHP L +D + G P TT
Sbjct: 383 VVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT-------------------- 421
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
D SGKM +L ++L R++ R+++ S ++ LD+ C R Y Y R+
Sbjct: 422 ----DEHLAYNSGKMIILDKMLKKFREQG-SRVLIFSQMSRLLDILEDYCYLRDYEYCRI 476
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG+T+ R + ++ +N P ++F+FLL+++AGG G+NL + ++L+D DWNP D QA
Sbjct: 477 DGSTAHEDRIEAIDSYNAPDSDKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQA 536
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ-EQTDSSATQGNFLS 684
R R GQKK+V +YRF++ IEEKV +R K L Q VIQQ Q ++ GN S
Sbjct: 537 MDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGRQVTNANAIGN--S 594
Query: 685 TEDL 688
+DL
Sbjct: 595 KDDL 598
>gi|357162876|ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 999
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 174/585 (29%), Positives = 283/585 (48%), Gaps = 89/585 (15%)
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
EP G P + + + L PHQREG+++++ +L+ G G IL DDMGLGKT
Sbjct: 268 EPTGSGVMAKPYKLPGRIFKMLYPHQREGLRWLW-----VLHCRGT-GGILGDDMGLGKT 321
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
+Q A L L F + ++++ ++V P +L+++W E+ ++ L E RD
Sbjct: 322 MQVSAFLAGL----FHSR-LIRRVLVVAPKTLLTHWMKEL--------SVVGLKEKIRD- 367
Query: 283 VVSGIDSFTDPCSSLQ-------VLIVSYETFR-----MHSSKFSCSES------CDLLI 324
SG S S LQ +L+ +Y+ R M ++ ++ D +I
Sbjct: 368 -YSG-PSVNIRNSELQYAFRVGGILLTTYDIVRNNYKLMRGDFYNDADDEEEGRLWDYVI 425
Query: 325 CDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFR 365
DE H +KN +T + N+L+E +A+ F P ILGD F+
Sbjct: 426 LDEGHIIKNPKTQRAQSLLQIPCVHRIVISGTPIQNNLKEMWALFFFCCPEILGDKDEFK 485
Query: 366 RYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--------TNALLSNHLPP 417
YE I+ G + +AT EK +G + EL ++ + LRR T + L
Sbjct: 486 TRYELPILRGNDKSATNREKHIGSNVAKELRERIKPYFLRRMKSEVFLDTGSTDDKKLSK 545
Query: 418 KIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI--- 474
K ++ KLT Q +LY F++S+ V ++ Q LA IT LKK+C+HP ++
Sbjct: 546 KNELIIWLKLTACQRQLYEAFLNSELVHSSM-----QGSPLAAITILKKICDHPLILTKR 600
Query: 475 -YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV--ELSGKMHVLARLLGHL 531
+ I G G G + +M + D V E+S K+ + LL L
Sbjct: 601 AAEGILEGMEGMDGLNNQEIGMVEKMAKNLADMAHDDDALQVDQEVSCKLSFIMSLLRKL 660
Query: 532 RQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV 591
+ +++ S + L+L + Y +LR+DGTT IS+R+++V F + + +
Sbjct: 661 LEE-GHHVLIFSQTRKMLNLIQEAILLEGYKFLRIDGTTKISERERIVKDFQEGPGAQ-I 718
Query: 592 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIE 651
FLL+++ GG GL L R+++ DP WNP+ D Q+ R +R GQ K V +YR +++GTIE
Sbjct: 719 FLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSGTIE 778
Query: 652 EKVYQRQMSKEGLQKVI--QQEQTDSSATQGNFLSTEDLRDLFTF 694
EK+Y+ Q+ K L + Q+EQT + S D+++LF+
Sbjct: 779 EKIYKLQVFKGALFRTATEQKEQT-------RYFSKRDIQELFSL 816
>gi|398021687|ref|XP_003864006.1| transcription activator [Leishmania donovani]
gi|322502240|emb|CBZ37323.1| transcription activator [Leishmania donovani]
Length = 1103
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 291/600 (48%), Gaps = 82/600 (13%)
Query: 163 EPQNDGGNLVPITVDPLLVR-FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + G +++ +T P +R LRP+Q EGV ++ GL + G++G ILAD+MGLGK
Sbjct: 144 EEDSTGFDMMHLTETPSYIRGKLRPYQIEGVNWLL----GLF-SRGVNG-ILADEMGLGK 197
Query: 222 TLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
T Q+IA + Y G G +V V P S++ NW E K W G L+ ++
Sbjct: 198 TFQTIATIAYLKFTVGMPGPHLV-----VCPKSVMGNWYREFKHWCPG--LLVYKFHASS 250
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE--SCDLLICDEAHRLKNDQTLT 338
D S + + P ++ ++ TF M + + + + LI DEAH+LKN++
Sbjct: 251 DIRPSIVKAHLHPTDRIKYDVI-LTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRA 309
Query: 339 N-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
+ +N+L E +A+++F P + D+ F +++T T
Sbjct: 310 HTALDSLQTSHRLIITGTPLQNNLRELWALLHFLAPRLFNDSESFDTWFDT--------T 361
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
+ +++ + S L + ++RR A +S +PPK V C+L+ Q E Y + +
Sbjct: 362 SGQQDANV----MSNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKKQREWYMNVL 417
Query: 440 HSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM 499
+K+ + + + + +L+K+ NHP L+ D + G P T
Sbjct: 418 -AKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLM-DGGEEGPPFVT------------- 462
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ--RTDDRIVLVSNYTQTLDLFAQLCR 557
D V SGKM +L +LL LR + ++++ S +T L++ C
Sbjct: 463 -----------DEKLVRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCN 511
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R + Y R+DG TS R + FN PS + F+FLLS++AGG G+NL N ++L+D D
Sbjct: 512 MRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIFLLSTRAGGLGINLQAANHVILYDSD 571
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSS 676
WNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L V+QQ + S
Sbjct: 572 WNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGRLQSK 631
Query: 677 ATQGNFLSTEDLRDLFTF-HDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
AT N S E+L + F +++ HE++ D E+I TN A + Q
Sbjct: 632 AT--NQASKEELLSMIKFGAEEIFKTRHEDVTEADIDRLLDEGETIS-NQLTNEAKQQVQ 688
>gi|320580373|gb|EFW94596.1| chromatin remodelling complex ATPase chain ISW1 [Ogataea
parapolymorpha DL-1]
Length = 1018
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 263/527 (49%), Gaps = 76/527 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L + +G DG P
Sbjct: 120 LRDYQIQGLNWLISLYENRLSG------ILADEMGLGKTLQTISFLGFLRYYKGIDG-PF 172
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
I+V P S + NW E +W V ++ L + T+++ I+ + V I
Sbjct: 173 ----IVVVPKSTLDNWRREFARWTP-EVNVLVL-QGTKEERAELINDKL-MQADFDVCIT 225
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
S+E SK + ++ DEAHR+KN+++ ++ N+L
Sbjct: 226 SFEMVIREKSKLGKIR-WEYIVIDEAHRIKNEESALSQIIRVFYSKHRLLITGTPLQNNL 284
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + GD F ++E+ EE++ +++ L ++ F+
Sbjct: 285 HELWALLNFILPDVFGDDEVFNEWFESQ---------GEEDQDQVVQK---LHKVLSPFL 332
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILAYI 461
LRR + + L PKI V +T +Q + Y + + V AI + ++++L +
Sbjct: 333 LRRVKSDVEKSLLPKIETNVYVGMTDMQIKWYRNLLEKDIDAVNGAIGKREGKTRLLNIV 392
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
L+K CNHP L ++ + G P TT D V SGKM
Sbjct: 393 MQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLVYNSGKM 427
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
VL +LL L Q R+++ S ++ LD+ C R Y Y R+DG+T+ +R + ++
Sbjct: 428 IVLDKLLKKL-QSEGSRVLIFSQMSRLLDILEDYCYLRGYQYCRIDGSTAHEERIQSIDD 486
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
FN P ++F+FLL+++AGG G+NL + +VL+D DWNP D QA R R GQKK+V +
Sbjct: 487 FNKPGSDKFIFLLTTRAGGLGINLTTADAVVLYDSDWNPQADLQAMDRAHRIGQKKQVKV 546
Query: 642 YRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTED 687
+RF++ IEEKV +R K L Q VIQQ + ++ AT +T+D
Sbjct: 547 FRFVTENAIEEKVLERAAQKLRLDQLVIQQGRANNKATSQTIGNTKD 593
>gi|146097991|ref|XP_001468285.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5]
gi|134072652|emb|CAM71368.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5]
Length = 1103
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 291/600 (48%), Gaps = 82/600 (13%)
Query: 163 EPQNDGGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + G +++ +T P +R LRP+Q EGV ++ GL + G++G ILAD+MGLGK
Sbjct: 144 EEDSTGFDMMHLTETPSYIRGKLRPYQIEGVNWLL----GLF-SRGVNG-ILADEMGLGK 197
Query: 222 TLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
T Q+IA + Y G G +V V P S++ NW E K W G L+ ++
Sbjct: 198 TFQTIATIAYLKFTVGMPGPHLV-----VCPKSVMGNWYREFKHWCPG--LLVYKFHASS 250
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE--SCDLLICDEAHRLKNDQTLT 338
D S + + P ++ ++ TF M + + + + LI DEAH+LKN++
Sbjct: 251 DIRPSIVKAHLHPTDRIKYDVI-VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRA 309
Query: 339 N-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
+ +N+L E +A+++F P + D+ F +++T T
Sbjct: 310 HTALDSLQTSHRLIITGTPLQNNLRELWALLHFLAPRLFNDSESFDTWFDT--------T 361
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
+ +++ + S L + ++RR A +S +PPK V C+L+ Q E Y + +
Sbjct: 362 SGQQDANV----MSNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKKQREWYMNVL 417
Query: 440 HSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM 499
+K+ + + + + +L+K+ NHP L+ D + G P T
Sbjct: 418 -AKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLM-DGGEEGPPFVT------------- 462
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ--RTDDRIVLVSNYTQTLDLFAQLCR 557
D V SGKM +L +LL LR + ++++ S +T L++ C
Sbjct: 463 -----------DEKLVRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCN 511
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R + Y R+DG TS R + FN PS + F+FLLS++AGG G+NL N ++L+D D
Sbjct: 512 MRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIFLLSTRAGGLGINLQAANHVILYDSD 571
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSS 676
WNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L V+QQ + S
Sbjct: 572 WNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGRLQSK 631
Query: 677 ATQGNFLSTEDLRDLFTF-HDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
AT N S E+L + F +++ HE++ D E+I TN A + Q
Sbjct: 632 AT--NQASKEELLSMIKFGAEEIFKTRHEDVTEADIDRLLDEGETIS-NQLTNEAKQQVQ 688
>gi|340376805|ref|XP_003386922.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Amphimedon queenslandica]
Length = 623
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 278/570 (48%), Gaps = 91/570 (15%)
Query: 155 PLVLWQPEEPQNDGGNLVP-ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCIL 213
P VL PE +VP I V + ++LR +QR+G++F++ S G+ G +L
Sbjct: 21 PYVLSTPE--------IVPSICVPAPINQYLREYQRDGIKFLYSQYS-----KGVGG-LL 66
Query: 214 ADDMGLGKTLQSIALLYTLLCQG-------FDGKPMV---KKAIIVTPTSLVSNWEAEIK 263
DDMGLGKT+Q IA + +LC+ G +V +++ P S++ NW +EI+
Sbjct: 67 CDDMGLGKTVQVIAFICAILCKTCTKIDVFLTGPKLVVSKSAVLVICPCSVIYNWVSEIE 126
Query: 264 KWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLL 323
W + + + +D+++ + L V++ + ET ++ + + +
Sbjct: 127 TWSHLKTGVYH--RNKKDEILDKVSR-----GRLDVVLTTLETAKLKVEELNSIPWLAVF 179
Query: 324 ICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYF 364
+ DE H LKN ++ +N L E + ++N+ +PG LG F
Sbjct: 180 V-DEVHALKNPKSQVTEALLQLKCQIRFGLTGTALQNRLSELWCILNWIHPGCLGAWHEF 238
Query: 365 RRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVC 424
+ YE ++ G++ T E E+ +LS ++ +++RRT L+++ LP K VV
Sbjct: 239 QFIYERPLLQGQKFDCTRRELATAKEKQQQLSQLLSDWMIRRTKELIADQLPKKEEFVVF 298
Query: 425 CKLTPLQSELYNHFIHSKNV-----------------KRAISEETKQSKILA----YITA 463
C +T LQ +Y+ + + + K ++ S +L+ Y++
Sbjct: 299 CPVTKLQGNIYSTILETDEMVNFVEAHQPCWCNSGLSKLNCCDKHCSSGLLSVQGIYLSL 358
Query: 464 LKKLCNHPKLIYDTI-KSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVELS-- 518
L K NH L+ + S ++ C + F PE D +++ L+
Sbjct: 359 LLKCSNHIGLLLPSFFASDKQNEKAYQICKQVFSHYPEFLE------MSIDASFLTLADP 412
Query: 519 ---GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
GKM +L++LL H + ++++ S + L++ R Y Y RLDG+ + R
Sbjct: 413 TYCGKMQILSKLLSHFHLESS-KVIIFSESVRLLNILENYMVCRSYTYCRLDGSMRVEDR 471
Query: 576 QKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
+V+ FN DPS FVFL+S K GG GLN+ G NR+++FDP WNPAND QA R +R G
Sbjct: 472 GAVVSKFNSDPSL--FVFLISKKCGGVGLNITGANRVIIFDPSWNPANDLQAEDRAFRIG 529
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
Q++ V +YR +S GTIEE +Y RQ+ K+ L
Sbjct: 530 QRQNVEVYRLISEGTIEEILYLRQIYKQQL 559
>gi|358399258|gb|EHK48601.1| hypothetical protein TRIATDRAFT_53490 [Trichoderma atroviride IMI
206040]
Length = 1133
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 278/577 (48%), Gaps = 96/577 (16%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
+Q+ GVQ++ E + G I+ D+MGLGKT+Q IA + L K + K
Sbjct: 376 YQKTGVQWLAELYKQSV------GGIIGDEMGLGKTVQLIAFIAALHY----SKKLKKPV 425
Query: 247 IIVTPTSLVSNWEAEIKKWVGG-RVQLI-----ALCESTRDDVVSGIDSFTDPCSSLQ-- 298
I+V P +L+ W +E +W RV ++ + T +D ++ F+ + +
Sbjct: 426 IVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPTAEDEYD-VEHFSPMATKSEKA 484
Query: 299 -------------VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN---DQTLT---- 338
VL+ +Y + ++ + E D + DE H+++N + T+T
Sbjct: 485 ARKIVKGVVQKGHVLVTTYTGLQTYADELLHVE-WDYAVLDEGHKIRNPNAEITVTCKEL 543
Query: 339 ---NR---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
NR N+L E +++ +F P LG F++ +E I G A+ +
Sbjct: 544 NTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPIRQGGYANASNLQVM 603
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
+ + L +++++L+R ++ LP K +V+ CKLT Q + Y FI S V
Sbjct: 604 TAEKCAEALKETISEYLLQRLKVDVAADLPEKTEQVLFCKLTESQRKAYERFIGSDEVA- 662
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
AI +QS L I L+K+CNHP L+ ++ S PG
Sbjct: 663 AILNRKRQS--LYGIDILRKICNHPDLLDKSLPS-KPG---------------------- 697
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
+ GD +LS K+ + LL + +++L S Q L++ + RE YLR+
Sbjct: 698 YDYGDP---KLSAKLQLTKDLLQKVMIPNGHKMLLFSQGKQMLNIIEKCIRECGISYLRM 754
Query: 567 DGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ 625
DG T I +RQ +++ FN DP + VFL++++ GG G NL G +R+++FDPDWNP+ D Q
Sbjct: 755 DGETPIDQRQPMIDKFNTDPDIH--VFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQ 812
Query: 626 AAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLS 684
A R WR GQ K V IYR ++ GTIEEK+Y RQ+ K+ + KV++ + SS
Sbjct: 813 ARERAWRLGQSKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRSS------YD 866
Query: 685 TEDLRDLFTF--HDD---VRSEIHENMHCTRCQNYDD 716
DL DLFTF H D RSE+ + +N D+
Sbjct: 867 LSDLYDLFTFDKHTDAAAARSEVFKGAEVNLKKNADN 903
>gi|346977297|gb|EGY20749.1| DNA repair and recombination protein RAD26 [Verticillium dahliae
VdLs.17]
Length = 1116
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 260/546 (47%), Gaps = 87/546 (15%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
+Q+ GVQ++ E S + G I+ D+MGLGKT+Q+IA + L K + K
Sbjct: 355 YQKTGVQWLAELYSQNV------GGIVGDEMGLGKTVQAIAFIAALHY----SKKLTKPV 404
Query: 247 IIVTPTSLVSNWEAEIKKWVGG-RVQ--------LIALCESTRDDVV------SGIDSFT 291
IIV P +++ W E +W RV +I L E D+ +
Sbjct: 405 IIVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHNGRRDKSVRKIV 464
Query: 292 DPCSSL-QVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN----------DQTLTNR 340
D VL+ +Y + + + E D + DE H+++N + NR
Sbjct: 465 DRVVKHGHVLVTTYNGLQTYQDELLHVE-WDYAVLDEGHKIRNPNAEITVLCKELRTPNR 523
Query: 341 ---------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIER 391
N+L E +++ +F P LG FR +E I G AT + L E+
Sbjct: 524 IILSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQI-LTAEK 582
Query: 392 SSE-LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISE 450
+E L ++Q++L+R ++ LP K V+ CK+T Q E Y F++S V + +S
Sbjct: 583 CAETLKEAISQYLLQRLKIDVAADLPSKTERVLFCKMTDRQLEAYKQFLNSDAVNQILS- 641
Query: 451 ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ K L I L+K+CNHP LI P + + W G
Sbjct: 642 --ARRKSLYGIDILRKICNHPDLI---------------------DPHLQNKAGYDW--G 676
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQ-LCRERRYPYLRLDGT 569
D E SGKM V+ LL + ++ + +L S L++ + L Y+R+DG
Sbjct: 677 DP---EKSGKMLVVRNLL-QIWKKLGHKTLLFSQSKMMLNVIEKFLGGLETVKYVRMDGE 732
Query: 570 TSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
TSI KRQ L++ FN DP + +FLL+++ GG G+NL G NR+++FDPDWNP+ D QA
Sbjct: 733 TSIEKRQSLIDRFNTDPEID--IFLLTTRTGGLGVNLTGANRIIIFDPDWNPSTDMQARE 790
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R WR GQ + V IYR ++ GTIEEK+Y RQ+ K+ + + ++ +A DL
Sbjct: 791 RAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLKDPKQRAA-----FDLSDL 845
Query: 689 RDLFTF 694
DLFTF
Sbjct: 846 YDLFTF 851
>gi|440792793|gb|ELR14001.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1293
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 260/548 (47%), Gaps = 92/548 (16%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKA 246
+Q+ GV++M+E NA GI G D+MGLGKT+Q ++ L L P+
Sbjct: 477 YQKTGVRWMWELHRQ--NAGGIIG----DEMGLGKTVQVMSFLAGLHHSEMLNGPI---- 526
Query: 247 IIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYET 306
+IV P +++ W E KW +A+ T S D + VLI +Y
Sbjct: 527 LIVCPATVMQQWVRECHKWWPPF--RVAVLHDTGTYSGSASDLIERIATDGHVLITTYSG 584
Query: 307 FRMHSSKFSCSESCDLLICDEAHRLKN---DQTLTNR----------------NDLEEFF 347
R++ + C + + DE +++N D TL + N+L E +
Sbjct: 585 TRLNQ-EVMCEVDWEYAVLDEGDKIRNPDADITLACKRLRTHHRLILTGSPIQNNLTELW 643
Query: 348 AMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT 407
++ +F PG LG + I G AT+ + + + + L + ++LRR
Sbjct: 644 SLFDFVFPGKLGTE------FALPISMGGYSNATKLQVQTAYKCAVVLRDLIKPYLLRRM 697
Query: 408 NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ---SKILAYITAL 464
A LT Q Y ++ SK+V+ + +E + +K+LA I L
Sbjct: 698 KA----------------DLTAEQRMDYEDYLGSKDVQDILGKERRDRMTNKVLACIMNL 741
Query: 465 KKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVL 524
+K+CNHP L+ P E + G W SGK+ V
Sbjct: 742 RKICNHPDLM--------------------LPFEKWPQDYGYWG--------RSGKLKVT 773
Query: 525 ARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFND 584
+LL R++ R++L S Q LD+ + E+ Y YLR+DGTTSI +R LV+ FN+
Sbjct: 774 EQLLQMWREQ-GHRVLLFSQTRQMLDIVERFVVEKGYDYLRMDGTTSIGRRMGLVDEFNN 832
Query: 585 PSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 644
++ F+FLL+++ GG G+NLIG +R++++DPDWNP+ D QA R WR GQK+ V +YR
Sbjct: 833 NPRH-FLFLLTTRVGGLGVNLIGADRVLIYDPDWNPSTDMQARERAWRIGQKREVTVYRL 891
Query: 645 LSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIHE 704
++ G +EEK+Y RQ+ K+ L I ++ Q F + DLRDLFT + ++E E
Sbjct: 892 ITAGAVEEKIYHRQIFKQFLSNKILKD-----PKQRRFFKSSDLRDLFTLGKEGKAETTE 946
Query: 705 NMHCTRCQ 712
R Q
Sbjct: 947 LFDDIRAQ 954
>gi|389630280|ref|XP_003712793.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae
70-15]
gi|351645125|gb|EHA52986.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae
70-15]
gi|440469732|gb|ELQ38833.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae Y34]
Length = 1197
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 190/661 (28%), Positives = 305/661 (46%), Gaps = 122/661 (18%)
Query: 161 PEEPQN--DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
P++P + D G +P + P L + Q+ GV+++ E + G I+ D+MG
Sbjct: 369 PDQPDHHFDNGLKLPGDIYPALFDY----QKTGVRWLAELYEQNV------GGIVGDEMG 418
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCE 277
LGKT+Q I+ + L K + K I+V P +L+ W E +W RV ++
Sbjct: 419 LGKTVQLISFVAALHY----SKKLKKPVIVVAPATLLQQWVNEFHRWWPPLRVSILHSSG 474
Query: 278 STRDDVVSG--IDSFTDPCSSLQ--------------------------VLIVSYETFRM 309
S D+ + I+ D SS + VL+ +Y +
Sbjct: 475 SGMYDIRNEGRIEDDDDGYSSDESTQKSKKSKGAAAAKRIVDRVVESGHVLVTTYAGLQT 534
Query: 310 HSSKFSCSESCDLLICDEAHRLKNDQT-LT---------NR---------NDLEEFFAMV 350
+ E D + DE H+++N T LT NR N+L E +++
Sbjct: 535 YGDILIPVE-WDYAVLDEGHKIRNPNTSLTVYCKELRTPNRVILSGTPIQNNLVELWSLF 593
Query: 351 NFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNAL 410
+F P LG FR E I G AT + + + L ++ ++L+R A
Sbjct: 594 DFIYPMRLGTLHEFRNNIEIPIKMGGYANATNLQIMAAQKCAETLKDAISPYLLQRVKAD 653
Query: 411 LSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNH 470
++ LP K +V+ C+LT Q + Y F+ S+ + + +S K L I L+K+CNH
Sbjct: 654 VATDLPKKSEQVLFCRLTESQRQAYEQFLASQAMDQILSGTRKS---LFGIDYLRKVCNH 710
Query: 471 PKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGH 530
P L+ P + + +W + SGKM V+ LL
Sbjct: 711 PDLV---------------------EPSLRNDHHYNWGSANK-----SGKMQVVKALL-Q 743
Query: 531 LRQRTDDRIVLVSNYTQTLDLFAQLCRERR-YPYLRLDGTTSISKRQKLVNHFNDPSKNE 589
+ ++ + +L S TQ LD+ R++ YLR+DG T+I RQ +V+ FN+ S
Sbjct: 744 MWKKFGHKTLLFSQGTQMLDILEDFVRKQDDITYLRMDGKTAIKDRQAMVDQFNN-SPGI 802
Query: 590 FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGT 649
+FLL++K GG G NL G +R++++DPDWNP+ D QA R WR GQKK V IYR ++ GT
Sbjct: 803 DLFLLTTKVGGLGTNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKKEVTIYRLMTAGT 862
Query: 650 IEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF--HDDVRSEIHENMH 707
IEEK+YQRQ+ K+ L + ++ + +A F + DL DLFT H++ ++E +
Sbjct: 863 IEEKIYQRQIFKQFLTNKVLKDPSQRTA----FATMNDLHDLFTLSSHENGKTETGKMFQ 918
Query: 708 CTRCQ------NYDDGAES-IGEGDET---------NSANKNDQ---SDQEVTDIGGFAG 748
+ + N GA I G ++ NS K++ ++E+ +I G AG
Sbjct: 919 DSEVKTKGGGVNVTQGASKVIIPGSDSYHVPSHPAMNSEGKSEHPKDDEKELRNIAGVAG 978
Query: 749 L 749
L
Sbjct: 979 L 979
>gi|156845729|ref|XP_001645754.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156116422|gb|EDO17896.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 661
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 275/548 (50%), Gaps = 83/548 (15%)
Query: 174 ITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-Y 230
+T P V+ LR +Q +G+ ++ L+ + G ILAD+ GLGKTLQ+I+ L Y
Sbjct: 133 VTESPSYVKSGILRDYQIQGLNWLIS-----LHENNLSG-ILADETGLGKTLQTISFLGY 186
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVVSGID 288
+ DG P +++ P S + NW E KW V+ + L + TR+ ++ +
Sbjct: 187 LRYIKKIDG-PF----LVIVPKSTLDNWRREFNKWTP-EVKAVVLHGDKETRNTLLQDVI 240
Query: 289 SFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------- 340
+ VLI SYE S + ++ DEAHR+KN+Q+ ++
Sbjct: 241 ----LEAKFDVLITSYEMVIKEKSTLK-KIAWYYIVIDEAHRIKNEQSALSQIIRLFYSK 295
Query: 341 -----------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGI 389
N+L E +A++NF P + GDAA F ++E + +E++++ +
Sbjct: 296 NRLLITGTPLQNNLHELWALLNFLLPDVFGDAALFDEWFEQN--------NNDEDQEVVV 347
Query: 390 ERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRA 447
+ +L + +N F+LRR A + L PKI + +T +Q + Y + V A
Sbjct: 348 Q---QLHSVLNPFLLRRIKADVEKSLLPKIETNLYVGMTQMQRKWYKSLLEKDIDAVNGA 404
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
+ + ++++L + L+K CNHP L ++ + G P TT
Sbjct: 405 VGKREGKTRLLNIVMQLRKCCNHPYL-FEGAEPGPPYTT--------------------- 442
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
D V SGKM ++ L + + R+++ S ++ LD+ C R Y Y R+D
Sbjct: 443 ---DEHLVFNSGKM-IILDKLLKKLKESGSRVLIFSQMSRLLDILEDYCYFRGYNYCRID 498
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G+TS +R + ++ +N+P ++FVFLL+++AGG G+NL+ + +VL+D DWNP D QA
Sbjct: 499 GSTSHEERIEAIDEYNEPDSDKFVFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAM 558
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTE 686
R R GQKK+V +YRF++ IEEKV +R K L Q VIQQ + +A GN + +
Sbjct: 559 DRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGASKKTANLGN--NKD 616
Query: 687 DLRDLFTF 694
DL ++ +
Sbjct: 617 DLIEMIQY 624
>gi|358057258|dbj|GAA96867.1| hypothetical protein E5Q_03540 [Mixia osmundae IAM 14324]
Length = 1210
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 266/554 (48%), Gaps = 96/554 (17%)
Query: 162 EEPQNDGG--NLVPITVDPLLVRF--LRPHQREGVQFMFECVSGLLNAAGIHGCILADDM 217
E+ +NDG +L+ T P V+ +R +Q +G+ +M L+ GI+G ILAD+M
Sbjct: 276 EDDENDGSKDDLMVFTESPAYVKGGKMRDYQIQGLNWMIG-----LHHNGING-ILADEM 329
Query: 218 GLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI--- 273
GLGKTLQ+I+ L Y +G G + IV P S + NW E+ WV G +I
Sbjct: 330 GLGKTLQTISFLGYLKFYRGITGPHL-----IVVPKSTLDNWSREVAHWVPGFRSIILSG 384
Query: 274 ------ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
+C+ST +++ VLI SYE + S + + +I DE
Sbjct: 385 PKEERAEMCQST---IIT---------QEFDVLITSYEICQREKSTLK-KLAWEYIIIDE 431
Query: 328 AHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
AHR+KN ++ ++ NDL E +A++N+ P D + F R++
Sbjct: 432 AHRIKNVNSILSQIVRLFDSRGRLLITGTPLQNDLHELWALLNYIIPDCFSDVSDFDRWF 491
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
E G + + +L + F+LRR A + L PK + LT
Sbjct: 492 ERKGGEGEDADSV----------VKQLHKVLRPFLLRRVKADVEKSLLPKKEVNIYVGLT 541
Query: 429 PLQSELYNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTT 486
+Q + Y + V A ++ ++++L + L+K CNHP L +D + G P TT
Sbjct: 542 DMQRQWYKSILEKDIDAVNGAGGKKEGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPFTT 600
Query: 487 GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYT 546
D V+ +GKM VL +LL ++ + R+++ S +
Sbjct: 601 ------------------------DEHLVQNAGKMVVLDKLLTSMKAKGS-RVLIFSQMS 635
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
+ LD+ C R + Y R+DG+T + R ++ +N P +FVFLL+++AGG G+NL
Sbjct: 636 RVLDILEDYCFFRGHKYCRIDGSTDHADRISAIDDYNRPGSEKFVFLLTTRAGGLGINLT 695
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-Q 665
+ +VL+D DWNP D QA R R GQ K+V+++RF++ ++EEKV +R K L Q
Sbjct: 696 TADVVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEDSVEEKVLERAAQKLRLDQ 755
Query: 666 KVIQQEQTDSSATQ 679
VIQQ + S Q
Sbjct: 756 LVIQQGRATVSKAQ 769
>gi|296472015|tpg|DAA14130.1| TPA: excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Bos taurus]
Length = 1006
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 216/418 (51%), Gaps = 52/418 (12%)
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------------------- 339
+LI SY R+ S +I DE H+++N
Sbjct: 88 ILITSYSYIRLMQDDIS-RHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 146
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+N+L E +++ +F PG LG F + I G A+ + K + + L +
Sbjct: 147 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 206
Query: 400 NQFILRR--TNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI 457
N ++LRR ++ +S LP K +V+ C+LT Q ++Y +FI SK V R ++ E + I
Sbjct: 207 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQ---I 263
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGT-TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
+ + AL+K+CNHP L SG P G D E+ + G W +
Sbjct: 264 FSGLVALRKICNHPDLF-----SGGPKNLKGIPD------EELGEDQFGYW--------K 304
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
SGKM V+ LL + + R++L S Q LD+ R ++Y YL++DGTT+I+ RQ
Sbjct: 305 RSGKMIVVESLL-KIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQ 363
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
L+ +N+ + + FVFLL+++ GG G+NL G NR++++DPDWNP+ D QA R WR GQK
Sbjct: 364 PLITRYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQK 422
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
K+V +YR L+ GTIEEK+Y RQ+ K+ L + ++ Q F + DL +LFT
Sbjct: 423 KQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFKSNDLYELFTL 475
>gi|401427882|ref|XP_003878424.1| putative DNA-dependent ATPase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494672|emb|CBZ29974.1| putative DNA-dependent ATPase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1098
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 276/571 (48%), Gaps = 89/571 (15%)
Query: 163 EPQNDGGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + G +++ +T P +R LRP+Q EGV ++ S G++G ILAD+MGLGK
Sbjct: 144 EEDSTGFDMMHLTETPSYIRGKLRPYQIEGVNWLLSLFS-----RGVNG-ILADEMGLGK 197
Query: 222 TLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTR 280
T Q+IA + Y G G +V V P S++ NW E K W G L+ ++
Sbjct: 198 TFQTIATIAYLKFTLGMPGPHLV-----VCPKSVMGNWYREFKHWCPG--LLVYKFHASS 250
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSE--SCDLLICDEAHRLKNDQTLT 338
D S + + P ++ ++ TF M + + + + LI DEAH+LKN++
Sbjct: 251 DIRPSIVKAHLHPTDRIKYDVI-VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRA 309
Query: 339 N-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT 379
+ +N+L+E +A+++F P + D+ F +++T+ G++
Sbjct: 310 HTALDSLHTSHRLIITGTPLQNNLKELWALLHFLAPRLFSDSESFDTWFDTA--SGQQDA 367
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI 439
S L + ++RR A +S +PPK V C+L+ Q E Y + +
Sbjct: 368 NV----------MSNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKKQREWYMNVL 417
Query: 440 HSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEM 499
+K+ + + + + +L+K+ NHP L+ D + G P T
Sbjct: 418 -AKDAEVLNKAGGSVASLTNAMMSLRKVINHPYLM-DGGEEGPPFVT------------- 462
Query: 500 FSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ--RTDDRIVLVSNYTQTLDLFAQLCR 557
D V SGKM +L +LL LR + ++++ S +T L++ C
Sbjct: 463 -----------DEKLVRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCN 511
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
R + Y R+DG TS R + FN PS + F+FLLS++AGG G+NL N ++L+D D
Sbjct: 512 MRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIFLLSTRAGGLGINLQAANHVILYDSD 571
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSS 676
WNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L V+QQ + S
Sbjct: 572 WNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGRLQSK 631
Query: 677 ATQGNFLSTEDLRDLFTF---------HDDV 698
AT N S E+L + F H+DV
Sbjct: 632 AT--NQASKEELLSMIKFGAEEIFKTRHEDV 660
>gi|356527520|ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 1030
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 276/586 (47%), Gaps = 89/586 (15%)
Query: 163 EPQNDG-----GNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDM 217
EP+ DG G + + + L PHQREG+++++ L+ G G IL DDM
Sbjct: 300 EPETDGSITFTGPRSTYKLQAKIAKMLYPHQREGLKWLWS-----LHCLG-KGGILGDDM 353
Query: 218 GLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
GLGKT+Q L L ++++ +IV P +L+ +W E+ + L E
Sbjct: 354 GLGKTMQMCGFLAGLFHSR-----LIRRVLIVAPKTLLPHWIKELSA--------VGLSE 400
Query: 278 STRDDVVSGIDSFTDPCSSL----QVLIVSYETFRMHSSKFSCSE-----------SCDL 322
TR+ + + VL+ +Y+ R +S + + D
Sbjct: 401 KTREYFGTSTKLREYELQYILQDNGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGATWDY 460
Query: 323 LICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAY 363
+I DE H +KN T + N+L+E +A+ NF P +LGD +
Sbjct: 461 MILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCPELLGDHKW 520
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH--------L 415
F+ +E I+ G + A++ EK++G + EL +++ + LRR + + N L
Sbjct: 521 FKERFENPILRGNDKHASDREKRVGSSVAKELRDRIHPYFLRRLKSEVFNQDDEKTTAKL 580
Query: 416 PPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIY 475
K +V +LT +Q LY F+ S+ V A LA +T LKK+C+HP L+
Sbjct: 581 SQKQEIIVWLRLTSVQRHLYEAFLKSEIVLSAFD-----GSPLAALTILKKICDHPLLL- 634
Query: 476 DTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE-------LSGKMHVLARLL 528
T ++ G + ++ P E + D A + +S K+ + LL
Sbjct: 635 -TKRAAEDVLEGMDSMLK--PEEANVAEKLAMHIADVAGTDKFKDEQDVSCKISFIMSLL 691
Query: 529 GHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKN 588
+L +++ S + L+L + Y +LR+DGTT + R K+VN F +
Sbjct: 692 DNLIPEGH-CVLIFSQTRKMLNLIQECLVSEGYDFLRIDGTTKATDRLKIVNDFQE-GFG 749
Query: 589 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 648
+FLL+S+ GG GL L +R+++ DP WNP+ D Q+ R +R GQKK V +YR ++ G
Sbjct: 750 APIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCG 809
Query: 649 TIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
T+EEK+Y++Q+ K GL K + + Q + S +DLR+LF+
Sbjct: 810 TVEEKIYRKQVYKGGLFKTATEHK-----EQIRYFSQQDLRELFSL 850
>gi|384254120|gb|EIE27594.1| hypothetical protein COCSUDRAFT_34894 [Coccomyxa subellipsoidea
C-169]
Length = 735
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/509 (30%), Positives = 251/509 (49%), Gaps = 79/509 (15%)
Query: 217 MGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC 276
MGLGKT+Q L L G + +IIV P +++ W E++ W ++I L
Sbjct: 1 MGLGKTVQLAVFLAGLHHSG-----RFRPSIIVCPATVLRQWLRELRLWYPP-FRVIVLH 54
Query: 277 ES---------TRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327
ES +R +V + + S +L+ SY+ R+ S+ + + I DE
Sbjct: 55 ESQRSGNAPRPSRQKLVQLVKN-----SQAGILLTSYDQLRLQRSEL-LAVNWGYAILDE 108
Query: 328 AHRLKN---DQTLTNR----------------NDLEEFFAMVNFTNPGILGDAAYFRRYY 368
H+++N + TL + N L E +++ +F PG LG FR +
Sbjct: 109 GHKIRNPDAEITLVAKQLATVHRIIMSGSPIQNHLTELWSLFDFVFPGKLGTLPVFRAQF 168
Query: 369 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 428
I G A+ + + + L + ++LRR A ++ LP K +V+ C LT
Sbjct: 169 ALPIQIGGYANASAMQVSTAFKCAVVLRDLIAPYLLRRRKADVAQQLPKKTEQVLFCSLT 228
Query: 429 PLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGF 488
Q +LY ++ S V+ +++ + LA I L+K+CNHP L+ + T +
Sbjct: 229 TDQRDLYRSYLASDEVQDILND---RRNALAGIDILRKICNHPDLLQ---RRQWESTEKY 282
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
D +R SGK+ V ++L H +Q+ + + + Q
Sbjct: 283 GDPVR------------------------SGKLVVALKVLQHWKQQ-GHKALFFTQTQQM 317
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
LD+ + + + Y R+DG+T++ R +LV+ FN ++ FVFLL++K GG G+NL G
Sbjct: 318 LDIVERAVQAAGFRYHRMDGSTAVGARARLVDDFNG-NEQVFVFLLTTKVGGLGINLTGA 376
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKV 667
+R++L+DPDWNP+ D QA R WR GQK+ V IYR +++GTIEEKVY RQ+ K+ L +KV
Sbjct: 377 DRVLLYDPDWNPSTDMQARERAWRIGQKREVTIYRLITSGTIEEKVYHRQIYKQFLTEKV 436
Query: 668 IQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+Q + Q F ++D+ DLFT D
Sbjct: 437 LQDPK------QKRFFKSKDIHDLFTLGD 459
>gi|400594647|gb|EJP62485.1| SNF2 superfamily RAD26-like protein [Beauveria bassiana ARSEF 2860]
Length = 1115
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 173/621 (27%), Positives = 291/621 (46%), Gaps = 89/621 (14%)
Query: 143 IEENFTLPP--GVDPLVLWQP-EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECV 199
+ E PP G+ P+ ++ E PQ+ G L+P + ++LR +Q EGV+F+
Sbjct: 141 LSERPVFPPNSGIRPVRAYEDIELPQSAG--LIPAPI----AQYLRDYQIEGVKFLHR-- 192
Query: 200 SGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVK--------------K 245
GCIL DDMGLGKT+Q +A L + D + + +
Sbjct: 193 ----KFVYQEGCILGDDMGLGKTVQVVAFLTAAFGKTGDERDKRRLRQMRWYSVDRWYPR 248
Query: 246 AIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYE 305
+I+ P SL+ NW+ E+ +W G Q +DD++ T +++I +Y+
Sbjct: 249 ILIICPGSLLVNWKNELNRW--GWWQAEIYHGPNKDDILG-----TMRAGMSEIMITTYD 301
Query: 306 TFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDLEEF 346
T++ S + + D +I DE H+LK + T + N EE
Sbjct: 302 TYKNSRSAVNMVQ-WDAVIADECHKLKGHNSETTKAMNEINALCRIGLTGTAIQNKYEEL 360
Query: 347 FAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV-NQFILR 405
+A++++TNPG G + + + + G+ AT + L + + +L + ++ LR
Sbjct: 361 WALLDWTNPGNFGTRSEWSQTISKPLTVGQSHEATLAQLSLARQTAQKLVNNLLPRYFLR 420
Query: 406 RTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK--RAISE------------- 450
R +L+++ LP K VV C LT LQ + Y++F+ S +V R ISE
Sbjct: 421 RMKSLIADQLPKKTDRVVFCPLTDLQKQAYDNFLDSDDVSTIRDISETCEHEKKSGWCCG 480
Query: 451 ------ETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
T QS + + +L+KL NH L+ + + + ++ P+ +
Sbjct: 481 KYLSNGRTWQSAVFPSMMSLQKLSNHLTLLVPSATDLDGKQDSELNTLQICMPDKWQSLY 540
Query: 505 GSWTG-GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPY 563
G+ E GK V+ +LL D++++ S+ + L + L Y
Sbjct: 541 AQRDQIGNLVNPEFCGKWKVMKKLL-KFWHSNGDKVLVFSHSVRLLRILQHLFTNTSYTV 599
Query: 564 LRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAN 622
LDGT S +RQ++V+ FN DP+ +FVFL+S++AGG GLN+ N++V+ DP WNP+
Sbjct: 600 SYLDGTLSYEQRQEVVDTFNSDPT--QFVFLISTRAGGVGLNITSANKVVIVDPHWNPSY 657
Query: 623 DKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNF 682
D QA R +R GQ + V ++R +S GT+EE VY RQ+ K+ + ++ +G
Sbjct: 658 DLQAQDRAYRIGQTRDVEVFRLISLGTVEEIVYARQVYKQQQANIGYTASSERRYFRGVQ 717
Query: 683 LSTE------DLRDLFTFHDD 697
+ L ++FTFH D
Sbjct: 718 QDADRKGEIFGLTNIFTFHSD 738
>gi|414586257|tpg|DAA36828.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 1048
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 170/595 (28%), Positives = 280/595 (47%), Gaps = 107/595 (17%)
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
+P P + + + L HQREG+++++ +L+ G G IL DDMGLGKT
Sbjct: 320 DPTGTAATSKPYKLPGKIFKMLFAHQREGLRWLW-----VLHCRGT-GGILGDDMGLGKT 373
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
+Q A L G +VK+ +IV P +L+++W E+ ++ L E RD
Sbjct: 374 MQVAAFL-----AGLFHSRLVKRVLIVAPKTLLAHWTKEL--------SIVGLKEKIRD- 419
Query: 283 VVSGIDSFTDPCSSLQ------------VLIVSYETFR-----MHSSKFSCSESCD---- 321
++ P ++++ +LI +Y+ R + + ++ S D
Sbjct: 420 -------YSGPSTNIRNYELQYAFKEGGILITTYDIVRNNYKLIRGNSYNNSNDDDDEEG 472
Query: 322 ----LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGIL 358
+I DE H +KN++T + N+L+E + + NF P +L
Sbjct: 473 TLWNYVILDEGHLIKNNKTQRAQSLYEIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVL 532
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--------TNAL 410
GD F+ YET+I+ G + AT EK +G + EL ++ + LRR T A
Sbjct: 533 GDKQQFKIRYETAILRGNDKNATAREKHVGSNVAKELRERIKPYFLRRLKSEVVFDTGAS 592
Query: 411 LSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNH 470
L K +V KLTP Q +LY F++S+ V A+ ++ LA IT LKK+C+H
Sbjct: 593 EEKTLAKKNELIVWLKLTPCQRKLYEAFLNSELVHLALQ---PKASPLAAITILKKICDH 649
Query: 471 PKLIYDTIKSG---------NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
P L+ G N G + + +M + G D + +LS M
Sbjct: 650 PLLLTKKGAEGVLEGMGEMLNDQDIGMVEKMAMNLADMAHDDNALEVGQDVS-CKLSFIM 708
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L L+G +++ S + L+L + Y +LR+DGTT +S R+++V
Sbjct: 709 SLLRNLVGE-----GHHVLIFSQTRKMLNLIQEAIILEGYAFLRIDGTTKVSDRERIVKD 763
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
F + VFLL+++ GG GL L R+++ DP WNP+ D Q+ R +R GQ K V +
Sbjct: 764 FQEGCGAP-VFLLTTQVGGLGLTLTKATRVIVVDPAWNPSTDNQSVDRAYRIGQTKNVIV 822
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVI--QQEQTDSSATQGNFLSTEDLRDLFTF 694
YR +++ TIEEK+Y+ Q+ K L + Q+EQT + S ++++LF+
Sbjct: 823 YRLMTSATIEEKIYKLQVLKGALFRTATEQKEQT-------RYFSKSEIQELFSL 870
>gi|168023352|ref|XP_001764202.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella
patens subsp. patens]
gi|162684642|gb|EDQ71043.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella
patens subsp. patens]
Length = 802
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 175/593 (29%), Positives = 264/593 (44%), Gaps = 116/593 (19%)
Query: 217 MGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQL--- 272
MGLGKT+Q + L L G M +I+V P +L+ W+ E KKW V++
Sbjct: 1 MGLGKTIQVLVFLAGLHNSG-----MYTPSIVVCPVTLLRQWKREAKKWYPAFNVEILHD 55
Query: 273 --IALCEST----------------------------------RDDVVSGIDSFTDPCSS 296
+A +S+ +D ID D SS
Sbjct: 56 SAVASQKSSNKKKRKPKRGSDEEFDEEESDYSENEQEKPVKVKKDRWDGMIDRVVD--SS 113
Query: 297 LQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN----------------- 339
+++ +YE R+ K + I DE HR++N T
Sbjct: 114 DGIILTTYEQLRIVRDKL-LDINWGYAILDEGHRIRNPDAGTTLICKQLQTVHRIIMTGA 172
Query: 340 --RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSA 397
+N L E +++ +F PG LG F+ + I G AT + + L
Sbjct: 173 PIQNRLTELWSLFDFVFPGKLGVLPVFQAQFSLPIAIGGYSNATPLQVSTAYRCAVVLRD 232
Query: 398 KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKI 457
+ ++LRR + + HLP K V+ C LT Q Y F+ S V++ I + + S
Sbjct: 233 LIMPYLLRRMKSDVDAHLPKKTEHVLFCSLTKDQRSAYRAFLASSEVEQ-IFDGNRNS-- 289
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
L I L+K+CNHP L+ +G+P D +E
Sbjct: 290 LFGIDILRKICNHPDLLEREHSAGHP---------------------------DYGNIER 322
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
SGK+ VLA++L L + R++L + Q LD+ + Y Y R+DG T + +R +
Sbjct: 323 SGKLKVLAQVL-ELWKTQGHRVLLFTQTQQMLDIVENYVTSKGYVYRRMDGNTPVKQRMQ 381
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
L++ FN+ + F+F+L++K GG G NLIG NR+V+FDPDWNP+ D QA R WR GQKK
Sbjct: 382 LIDEFNE-GDHVFIFILTTKVGGLGTNLIGANRVVIFDPDWNPSTDMQARERAWRIGQKK 440
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
V IYR ++ GTIEEKVY RQ+ K L K+++ Q Q F D+RDLFT +
Sbjct: 441 EVVIYRLITRGTIEEKVYHRQIYKHFLTNKILRDPQ------QRRFFKARDMRDLFTLQE 494
Query: 697 D--------VRSEIHENMHCTRCQNYDDGAESIGEG--DETNSANKNDQSDQE 739
+ + +E+ + R D E++ + ++ NS N D QE
Sbjct: 495 ENAATETSTLFAEVGGSNRRQRGTKKDSQEEALNKHRPEQDNSHNSEDGEPQE 547
>gi|344229696|gb|EGV61581.1| chromatin remodelling complex ATPase chain ISW1 [Candida tenuis
ATCC 10573]
Length = 1062
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/523 (30%), Positives = 258/523 (49%), Gaps = 74/523 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ L+ ILAD+MGLGKTLQ+I+ L Y + DG P
Sbjct: 150 LRDYQIQGLNWLISLYENRLSG------ILADEMGLGKTLQTISFLGYLRYIKHIDG-PF 202
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL--CESTRDDVVSGIDSFTDPCSSLQVL 300
V ++ P S + NW E KW V ++ L + R D++ + VL
Sbjct: 203 V----VIVPKSTLDNWRREFAKWTP-EVNVVVLQGNKEQRTDIMQN----QLLTAKFDVL 253
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
+ S+E S+ + + ++ DEAHR+KN+++ ++ N
Sbjct: 254 VTSFEMVIREKSQLKKFK-WEYIVVDEAHRIKNEESSLSQIIRLFYSRNRLLITGTPLQN 312
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ 401
+L E +A++NF P + GD+ F +++ G+E E + + +L ++
Sbjct: 313 NLHELWALLNFLLPDVFGDSEVFDEWFDNQ--GGKE----NPESQDQDQVVQQLHQLLSP 366
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILA 459
F+LRR A + L PKI V +T +Q + Y + V A+ + ++++L
Sbjct: 367 FLLRRVKADVEKSLLPKIETNVYIGMTDMQRKWYRQLLEKDIDAVNGAVGKREGKTRLLN 426
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSG 519
+ L+K CNHP L +D + G P TT D V +G
Sbjct: 427 IVMQLRKCCNHPYL-FDGAEPGPPFTT------------------------DEHLVFNAG 461
Query: 520 KMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV 579
KM +L ++L + R R+++ S ++ LD+ C R Y Y R+DG+TS +R + +
Sbjct: 462 KMIILDKMLSKFK-REGSRVLIFSQMSRLLDILEDYCFLREYNYCRIDGSTSHEERIQAI 520
Query: 580 NHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV 639
+ +N P +F+FLL+++AGG G+NL + ++L+D DWNP D QA R R GQKK+V
Sbjct: 521 DDYNAPDSEKFIFLLTTRAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQKKQV 580
Query: 640 FIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGN 681
++RF+S IEEKV +R K L Q VIQQ ++ S+A G+
Sbjct: 581 KVFRFVSENAIEEKVLERAAQKLRLDQLVIQQGRSSSTAAIGS 623
>gi|414586258|tpg|DAA36829.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 961
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 170/595 (28%), Positives = 280/595 (47%), Gaps = 107/595 (17%)
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
+P P + + + L HQREG+++++ +L+ G G IL DDMGLGKT
Sbjct: 320 DPTGTAATSKPYKLPGKIFKMLFAHQREGLRWLW-----VLHCRGT-GGILGDDMGLGKT 373
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
+Q A L G +VK+ +IV P +L+++W E+ ++ L E RD
Sbjct: 374 MQVAAFL-----AGLFHSRLVKRVLIVAPKTLLAHWTKEL--------SIVGLKEKIRD- 419
Query: 283 VVSGIDSFTDPCSSLQ------------VLIVSYETFR-----MHSSKFSCSESCD---- 321
++ P ++++ +LI +Y+ R + + ++ S D
Sbjct: 420 -------YSGPSTNIRNYELQYAFKEGGILITTYDIVRNNYKLIRGNSYNNSNDDDDEEG 472
Query: 322 ----LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGIL 358
+I DE H +KN++T + N+L+E + + NF P +L
Sbjct: 473 TLWNYVILDEGHLIKNNKTQRAQSLYEIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVL 532
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--------TNAL 410
GD F+ YET+I+ G + AT EK +G + EL ++ + LRR T A
Sbjct: 533 GDKQQFKIRYETAILRGNDKNATAREKHVGSNVAKELRERIKPYFLRRLKSEVVFDTGAS 592
Query: 411 LSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNH 470
L K +V KLTP Q +LY F++S+ V A+ ++ LA IT LKK+C+H
Sbjct: 593 EEKTLAKKNELIVWLKLTPCQRKLYEAFLNSELVHLALQ---PKASPLAAITILKKICDH 649
Query: 471 PKLIYDTIKSG---------NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
P L+ G N G + + +M + G D + +LS M
Sbjct: 650 PLLLTKKGAEGVLEGMGEMLNDQDIGMVEKMAMNLADMAHDDNALEVGQDVS-CKLSFIM 708
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L L+G +++ S + L+L + Y +LR+DGTT +S R+++V
Sbjct: 709 SLLRNLVGE-----GHHVLIFSQTRKMLNLIQEAIILEGYAFLRIDGTTKVSDRERIVKD 763
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
F + VFLL+++ GG GL L R+++ DP WNP+ D Q+ R +R GQ K V +
Sbjct: 764 FQEGCGAP-VFLLTTQVGGLGLTLTKATRVIVVDPAWNPSTDNQSVDRAYRIGQTKNVIV 822
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVI--QQEQTDSSATQGNFLSTEDLRDLFTF 694
YR +++ TIEEK+Y+ Q+ K L + Q+EQT + S ++++LF+
Sbjct: 823 YRLMTSATIEEKIYKLQVLKGALFRTATEQKEQT-------RYFSKSEIQELFSL 870
>gi|408399646|gb|EKJ78744.1| hypothetical protein FPSE_01112 [Fusarium pseudograminearum CS3096]
Length = 1894
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 264/534 (49%), Gaps = 57/534 (10%)
Query: 174 ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL 233
I V+ + R ++ HQ +GV+F++ + + +A+ GC+LA MGLGKT+Q I +L L
Sbjct: 909 IYVNDHIARSIKQHQVDGVRFIWNQI--VRDASVRQGCLLAHTMGLGKTMQVITVLVALA 966
Query: 234 CQGFDGKPMV----------KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV 283
P V + +++ P +LV NW E+ KW L AL + T +
Sbjct: 967 EASESQDPSVVAQIPKDLQNSRTLVLCPAALVDNWMDELLKWAPANA-LGALRKCTANTP 1025
Query: 284 VSGIDSF-TDPCSSLQVLIVSYETFRM---HSSKFS--CSESCDLLICDEAHRLKNDQTL 337
S T S VL+V Y+ F+ S + S + D+++CDEAH +KN ++
Sbjct: 1026 EHERPSIVTSWASGKGVLLVGYKMFQKLIDMSPELSNLLRDRPDVVVCDEAHHMKNRESK 1085
Query: 338 TN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
TN N++ E+FAM+++ P LG + FR Y + G
Sbjct: 1086 TNIACSRFQTKSRIALTGSPLSNNVLEYFAMIDWVAPNFLGPYSEFREIYSAPVERGLYH 1145
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
++ EK+ L V + RR +L LPPK ++ T LQ +LY +
Sbjct: 1146 DSSPAEKREAQMVLKALEQMVAPKVHRRNIVVLKGDLPPKQEFIIFVPPTELQKKLYRLY 1205
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKL----IYDTIKSGNPGTTGFEDCIRF 494
I K V R ++ Q+ A I L +C+HPK I + I++ G E+ +
Sbjct: 1206 I--KGVSREGAD--TQAGTFAAIFHLGLICSHPKCFQAKISEIIQNQLMSKVG-EETDKS 1260
Query: 495 FP----PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLD 550
FP PE F+ S+ D S K +L +L R+ +D++++ S TLD
Sbjct: 1261 FPKTIIPE-FTRTLESFADLDSP--AFSWKTELLTTILNEARE-VNDKVLVFSQSLDTLD 1316
Query: 551 LFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNR 610
++C+ + RLDG T ++ RQ+ V FN SK VFL+S+ AGG GLN+ G NR
Sbjct: 1317 YLEKMCKTQGRTVSRLDGKTRVADRQQQVKDFNQGSKE--VFLISTAAGGVGLNIQGANR 1374
Query: 611 LVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
+V+FD +NP++++QA R +R GQ+K+VF+YRF+ GT E+ + RQ+ K L
Sbjct: 1375 VVIFDIRYNPSHEQQAVGRAYRIGQQKKVFVYRFMVAGTFEDNLNNRQVFKMQL 1428
>gi|410080572|ref|XP_003957866.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
gi|372464453|emb|CCF58731.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
Length = 1058
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 173/583 (29%), Positives = 267/583 (45%), Gaps = 122/583 (20%)
Query: 183 FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM 242
L +Q+ VQ+++E G I+ D+MGLGKT+Q IA + +L G P+
Sbjct: 285 LLFGYQKTCVQWLYELFQQQ------SGGIIGDEMGLGKTIQVIAFVASLHHSGLLNGPV 338
Query: 243 VKKAIIVTPTSLVSNWEAEIKKW-----------VGGRVQLIA----------LCESTRD 281
+IV P +++ W E+ W +G + + L ST D
Sbjct: 339 ----LIVCPATVMKQWVNELHHWWPPLRAIILHAIGSGMSMKKKLTEDELEQILLRSTPD 394
Query: 282 D---------------------VVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC 320
+ +VS ID + +LI +Y R+HS K +
Sbjct: 395 EFSYNDFQKSSKAKYALESDMNLVSLIDKVVNNG---HILITTYVGLRIHSDKL-LKINW 450
Query: 321 DLLICDEAHRLKNDQT--------LTNRN-----------DLEEFFAMVNFTNPGILGDA 361
I DE H+++N + L RN +L E +++ +F PG LG
Sbjct: 451 AYAILDEGHKIRNPNSEIAITCKKLKTRNRIILSGTPIQNNLNELWSLFDFILPGKLGTL 510
Query: 362 AYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIE 421
F++ + I G A+ + + G + + L ++ ++LRR + ++ LP K
Sbjct: 511 PVFQQQFVMPINMGGYANASNIQVQTGYKCAVTLRDIISPYLLRRVKSDVAKDLPHKKEM 570
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK--ILAYITALKKLCNHPKLIYDTIK 479
V+ CKLT Q Y F++SK + E K K +L I L+K+CNHP ++
Sbjct: 571 VLFCKLTQYQRNKYIEFLNSKEL-----SEIKGGKRHVLYGIDILRKICNHPDIL----- 620
Query: 480 SGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRI 539
ED + + P+ SGKM V+ +LL L + +
Sbjct: 621 ----DKDKLEDDVSYGNPKR------------------SGKMQVVKQLL-LLWKDEGHKT 657
Query: 540 VLVSNYTQTLDLFAQLCRER-----RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLL 594
+L + Q LD+ Q + YLR+DGTT+ISKRQ+LV+ FN+ +N +FLL
Sbjct: 658 LLFTQSRQMLDILEQFISYKDPEMENINYLRMDGTTNISKRQELVDRFNN--ENYDLFLL 715
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
+++ GG G+NL G NR+++FDPDWNP+ D QA R WR GQK+ V IYR + +G+IEEK+
Sbjct: 716 TTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVSGSIEEKI 775
Query: 655 YQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDD 697
Y RQ+ K+ L I S Q F +L DLF+ D
Sbjct: 776 YHRQIFKQFLTNKIL-----SDPKQKRFFKMNELHDLFSLGGD 813
>gi|219121950|ref|XP_002181319.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407305|gb|EEC47242.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1431
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 186/616 (30%), Positives = 297/616 (48%), Gaps = 91/616 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
+RP+Q EG+ +M L G++G ILAD+MGLGKTLQSI++L Y L Q G +
Sbjct: 321 MRPYQLEGLNWMIR-----LQENGVNG-ILADEMGLGKTLQSISILVYMLEFQNVSGPHL 374
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALC--ESTRDDVV-SGID-SFTDPCSSLQ 298
I+ P S +SNW EI +W ++ I + TR++++ S ++ + D
Sbjct: 375 -----ILVPKSTLSNWMNEIARWAPT-LKAIRFHGDKVTREEIIRSKLEPAMRDEDREWN 428
Query: 299 VLIVSYETFRMHSS---KFSCSESCDLLICDEAHRLKNDQTLTNR--------------- 340
V++ +YE + + KF+ S LI DEAHRLKN+ + ++
Sbjct: 429 VVVTTYEICNIEKNTLNKFAWS----YLIIDEAHRLKNEASAFSKTVRLFETRYRVLLTG 484
Query: 341 ----NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELS 396
N L E +A++NF P + A F ++ I +E+ KL S+L
Sbjct: 485 TPLQNSLHELWALLNFLVPDVFESAEQFDEWFNLDI------EDNDEKNKL----ISQLH 534
Query: 397 AKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK 456
+ F+LRR A + LPPK ++ ++ +Q +LY + +++ ++
Sbjct: 535 KILRPFMLRRLKADVEKSLPPKHETILFTGMSAMQKKLYRDIL-IRDIDAVQGTSGSRTA 593
Query: 457 ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
IL + L+K HP L PGT ED R PP G+ VE
Sbjct: 594 ILNIVMQLRKCAGHPYLF--------PGT---ED--RSLPP-----------LGEHL-VE 628
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
GKM VL +LL L +R R++L + T+ LD+ RR+PY R+DG TS +R+
Sbjct: 629 NCGKMVVLDKLLKRLHERGH-RVLLFTQMTRVLDIMEDYLVMRRFPYCRIDGNTSYEQRE 687
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
+ ++ +N P+ +F+FLLS++AGG G+NL + ++L+D DWNP D QA R R GQK
Sbjct: 688 EYIDAYNAPNSEKFIFLLSTRAGGLGINLQTADVVILYDSDWNPQADLQAQDRAHRIGQK 747
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ V ++R ++ T+EEK+ +R K L ++ Q+ + LS E+L F
Sbjct: 748 RAVQVFRLVTEHTVEEKIVERAQQKLKLDAMVVQQ---GRLKDKDKLSHEELLAAVRFGA 804
Query: 697 D--VRSEIHENMHCTRCQNYDDGAESIGE-GDETNSANKNDQSDQEV--TDIGGFAGL-- 749
D +S+ D G + E D+ +A+K D D ++ + + F G+
Sbjct: 805 DKIFKSKDSSITDDDIDLVLDQGKQKTQELNDKLKAADKGDLLDFKLDGSSVQTFEGVDY 864
Query: 750 -AGCLHKLKSSEKQLG 764
L + KS + LG
Sbjct: 865 STSALAQAKSQAEMLG 880
>gi|414586259|tpg|DAA36830.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 894
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 170/595 (28%), Positives = 280/595 (47%), Gaps = 107/595 (17%)
Query: 163 EPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKT 222
+P P + + + L HQREG+++++ +L+ G G IL DDMGLGKT
Sbjct: 320 DPTGTAATSKPYKLPGKIFKMLFAHQREGLRWLW-----VLHCRGT-GGILGDDMGLGKT 373
Query: 223 LQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDD 282
+Q A L G +VK+ +IV P +L+++W E+ ++ L E RD
Sbjct: 374 MQVAAFL-----AGLFHSRLVKRVLIVAPKTLLAHWTKEL--------SIVGLKEKIRD- 419
Query: 283 VVSGIDSFTDPCSSLQ------------VLIVSYETFR-----MHSSKFSCSESCD---- 321
++ P ++++ +LI +Y+ R + + ++ S D
Sbjct: 420 -------YSGPSTNIRNYELQYAFKEGGILITTYDIVRNNYKLIRGNSYNNSNDDDDEEG 472
Query: 322 ----LLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGIL 358
+I DE H +KN++T + N+L+E + + NF P +L
Sbjct: 473 TLWNYVILDEGHLIKNNKTQRAQSLYEIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVL 532
Query: 359 GDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--------TNAL 410
GD F+ YET+I+ G + AT EK +G + EL ++ + LRR T A
Sbjct: 533 GDKQQFKIRYETAILRGNDKNATAREKHVGSNVAKELRERIKPYFLRRLKSEVVFDTGAS 592
Query: 411 LSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNH 470
L K +V KLTP Q +LY F++S+ V A+ ++ LA IT LKK+C+H
Sbjct: 593 EEKTLAKKNELIVWLKLTPCQRKLYEAFLNSELVHLALQ---PKASPLAAITILKKICDH 649
Query: 471 PKLIYDTIKSG---------NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
P L+ G N G + + +M + G D + +LS M
Sbjct: 650 PLLLTKKGAEGVLEGMGEMLNDQDIGMVEKMAMNLADMAHDDNALEVGQDVS-CKLSFIM 708
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L L+G +++ S + L+L + Y +LR+DGTT +S R+++V
Sbjct: 709 SLLRNLVGE-----GHHVLIFSQTRKMLNLIQEAIILEGYAFLRIDGTTKVSDRERIVKD 763
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
F + VFLL+++ GG GL L R+++ DP WNP+ D Q+ R +R GQ K V +
Sbjct: 764 FQEGCGAP-VFLLTTQVGGLGLTLTKATRVIVVDPAWNPSTDNQSVDRAYRIGQTKNVIV 822
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVI--QQEQTDSSATQGNFLSTEDLRDLFTF 694
YR +++ TIEEK+Y+ Q+ K L + Q+EQT + S ++++LF+
Sbjct: 823 YRLMTSATIEEKIYKLQVLKGALFRTATEQKEQT-------RYFSKSEIQELFSL 870
>gi|401408363|ref|XP_003883630.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool]
gi|325118047|emb|CBZ53598.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool]
Length = 1613
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 277/557 (49%), Gaps = 74/557 (13%)
Query: 163 EPQNDGGN----LVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDM 217
E + DG + V IT P + ++ +Q EG+ ++++ L+ I+G ILAD+M
Sbjct: 190 EAEGDGASQGDVFVRITEQPSCIEGKMKHYQIEGLNWLYQ-----LHCLDING-ILADEM 243
Query: 218 GLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE 277
GLGKTLQ+I++L L + K + +++ P S + NW E+KKW R + A
Sbjct: 244 GLGKTLQTISILAFLQFE----KNIPGPHLVICPRSTLDNWFNEVKKWCP-RFR-PARLH 297
Query: 278 STRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL 337
T+++ D+ DP + I +YE + + + LI DEAHR+KN++++
Sbjct: 298 GTKEERQELYDTVLDP-GHFDICITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSV 356
Query: 338 TN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
+ +N+L E +A++NF P + F ++ S +
Sbjct: 357 LSEVVRRFRPRRRLLITGTPLQNNLRELWALLNFIMPQLFDATLDFAALFDFSRLN---- 412
Query: 379 TATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
TE+++ I + L + F+LRR + ++ LPPK + ++ LQ +LY
Sbjct: 413 --TEQQQHQVI---TTLHRILRPFMLRRLKSDVARDLPPKREIYIFVGMSKLQKKLYADI 467
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ SKNV+ + ++++L + L+K CNHP L +D ++ G P G
Sbjct: 468 L-SKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYL-FDGVEPGPPYVEGEH--------- 516
Query: 499 MFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE 558
VE +GKM +L +LL L+ R++L S T+ LD+ CR
Sbjct: 517 ---------------MVEAAGKMALLDKLLPRLKAEGS-RVLLFSQMTRLLDIVDDYCRW 560
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R + Y R+DG T ++RQ+ ++ FN ++F+FLLS++AGG G+NL + ++LFD D+
Sbjct: 561 RGFDYCRIDGGTPGTERQERIDEFNAEGSSKFLFLLSTRAGGLGINLATADVVILFDSDF 620
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSA 677
NP D QA R R GQKKRV +YRF++ T+E K+ +R K L VIQ+ + S
Sbjct: 621 NPQMDLQAMDRAHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQKGRLSQSN 680
Query: 678 TQGNFLSTEDLRDLFTF 694
ST +L + F
Sbjct: 681 QAQKGPSTNELHAILQF 697
>gi|440492849|gb|ELQ75382.1| Chromatin remodeling complex WSTF-ISWI, small subunit
[Trachipleistophora hominis]
Length = 833
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 264/531 (49%), Gaps = 75/531 (14%)
Query: 167 DGGNLVPITVDPLLVR-FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQS 225
D G P +R LR +Q EGV ++ +N CILAD+MGLGKTLQ+
Sbjct: 49 DLGYAYSFRTSPKYIRGTLREYQIEGVNWLISMHEKNIN------CILADEMGLGKTLQT 102
Query: 226 IALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVS 285
I L L + P +++ P SL+ NW+AE KK++ +L S + +
Sbjct: 103 ITFLGYLKSFLKNDTP----HLLIVPKSLLHNWKAEFKKFLPS-FRLFTFHASHVE--IK 155
Query: 286 GIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----- 340
++ T ++ V+I +YE F + C L+I DEAHR+KN+ +L ++
Sbjct: 156 EMEE-TMENTNYDVVITTYEMCISAKKVFQRIQWCYLVI-DEAHRIKNEASLLSKIVRIF 213
Query: 341 --------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKK 386
N++ E +A++NF +P + D F ++ T E + K
Sbjct: 214 RCEHRLLLTGTPLQNNVHELWALLNFLDPKLFKDPEQFEKWI----------TQMENDNK 263
Query: 387 LGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKR 446
GI+ +L + F LRR + L PK + + +LT +Q LY I K++
Sbjct: 264 GGID---QLRKVLQLFFLRREKRDVEKTLLPKKVINLYPQLTAMQRNLYK-MILEKDLTP 319
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+ + +S +L + L+K CNHP L +D ++ G P TT
Sbjct: 320 LLHKREIKSSLLNVVIQLRKCCNHPYL-FDGMEPGPPYTT-------------------- 358
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
D V SGKM L +LL +++R + R+++ + T+ LD+ C R Y Y R+
Sbjct: 359 ----DEHLVYNSGKMVYLDKLLTEMKRR-NSRVLIFTQMTRMLDILEDYCTMREYEYRRI 413
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG+TS ++R + ++ FN + + FVFLLS++AGG G+NL + ++++D DWNP D QA
Sbjct: 414 DGSTSAAERGEAIDDFNAENSDVFVFLLSTRAGGLGINLATADIVIMYDSDWNPQIDLQA 473
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSA 677
R R GQ K+VF+++F++ TIEEK+ R + K L +++ + ++S+
Sbjct: 474 QDRAHRIGQTKQVFVFKFITENTIEEKIIYRALKKLKLDEILVKNNLNTSS 524
>gi|50312307|ref|XP_456186.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645322|emb|CAG98894.1| KLLA0F24838p [Kluyveromyces lactis]
Length = 1062
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 274/536 (51%), Gaps = 81/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L+ + + G ILAD+MGLGKTLQSI+ L Y +G +G
Sbjct: 136 LRDYQVYGLNWLIS-----LHESKLSG-ILADEMGLGKTLQSISFLGYLRYIKGIEGP-- 187
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
I++ P S + NW+ E KW V+ + L + +D I++ C+ VLI
Sbjct: 188 ---YIVIVPKSTLDNWQREFAKWTP-EVKTVIL-QGDKDFRKELIETKILTCN-FDVLIT 241
Query: 303 SYETFRMHSSKFSCSE-SCDLLICDEAHRLKNDQTLTNR-------------------ND 342
SYE + K + + + ++ DEAHR+KN+Q+ ++ N+
Sbjct: 242 SYEM--VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + GD+ F +++ + EE++++ ++ +L + + F
Sbjct: 300 LHELWALLNFLLPDVFGDSEVFDEWFQQN--------GKEEDQEVVVQ---QLHSVLQPF 348
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILAY 460
+LRR + + L PK + +T +Q E Y + V A+ + ++++L
Sbjct: 349 LLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNI 408
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
+ L+K CNHP L ++ + G P TT D V SGK
Sbjct: 409 VMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHLVFNSGK 443
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M VL +LL +++ R+++ S ++ LD+ C R Y Y R+DG+TS +R + ++
Sbjct: 444 MIVLDKLLKKKKEQ-GSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAID 502
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
+N P+ +F+FLL+++AGG G+NL+ + +VL+D DWNP D QA R R GQKK+VF
Sbjct: 503 EYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVF 562
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQT--DSSATQGNFLSTEDLRDLFTF 694
+YRF++ IEEKV +R K L +++ Q+ T +SA N +DL D+ F
Sbjct: 563 VYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNN---KDDLIDMIQF 615
>gi|118089662|ref|XP_420329.2| PREDICTED: probable global transcription activator SNF2L1 [Gallus
gallus]
Length = 1031
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 247/508 (48%), Gaps = 73/508 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ +M L G++G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 156 LRDYQVRGLNWMIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 209
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L A+C D + V +
Sbjct: 210 V-----LVPKSTLHNWMNEFKRWVPS---LRAVCLIGDKDARAAFIRDVMMPGEWDVCVT 261
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------NDL 343
SYE S F + L+ DEAHR+KN+++ TNR N+L
Sbjct: 262 SYEMVIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNL 320
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 321 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 368
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR A + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 369 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQ 428
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D + SGKM V
Sbjct: 429 LRKCCNHPYL-FDGAEPGPPYTT------------------------DTHLITNSGKMLV 463
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL LR++ R++L S T+ LD+ C R Y Y RLDG T +R++ ++ FN
Sbjct: 464 LDKLLAKLREQ-GSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 522
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 523 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 582
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
++ T+EE++ +R K L ++ Q+
Sbjct: 583 LITDNTVEERIVERAEIKLRLDSIVIQQ 610
>gi|401882858|gb|EJT47099.1| chromatin remodelling complex ATPase chain [Trichosporon asahii
var. asahii CBS 2479]
gi|406700517|gb|EKD03684.1| chromatin remodelling complex ATPase chain [Trichosporon asahii
var. asahii CBS 8904]
Length = 1069
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 268/536 (50%), Gaps = 86/536 (16%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
+R +Q +G+ +M L+ GI+G ILAD+MGLGKTLQ+I+ L Y +G +G
Sbjct: 188 MRDYQVQGLNWMVS-----LHHNGING-ILADEMGLGKTLQTISFLGYLKFHRGINGP-- 239
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
+IV P S + NW E+++WV G L+ + T+++ I+S VLI
Sbjct: 240 ---HLIVVPKSTLDNWAREVERWVPGFRVLV--LQGTKEERAELINSKI-LTQQFDVLIS 293
Query: 303 SYET-FRMHSS--KFSCSESCDLLICDEAHRLKNDQTLTNR------------------- 340
SYE R S+ KFS + +I DEAHR+KN +L ++
Sbjct: 294 SYEMCLREKSTLRKFSW----EYIIIDEAHRIKNVDSLLSQIIRTFASRGRLLITGTPLQ 349
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N+L+E +A++NF P + + F ++++ G EP A +L +
Sbjct: 350 NNLQELWALLNFILPDVFSSSEDFDEWFKSQ--PGDEPDAV----------VKQLHKVLR 397
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKIL 458
F+LRR A + + L PK + +T +Q + Y + V A ++ ++++L
Sbjct: 398 PFLLRRVKADVEHSLLPKKEINLYVGMTEMQRKWYRMLLEKDIDAVNGAGGKKEGKTRLL 457
Query: 459 AYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS 518
+ L+K CNHP L +D + G P TT D V+ +
Sbjct: 458 NIVMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DEHLVDNA 492
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM +L +LL ++ + R+++ S ++ LD+ C+ R + Y R+DG T+ R
Sbjct: 493 GKMIILDKLLKSMKAKGS-RVLIFSQMSRVLDILEDYCQFRGHKYCRIDGNTAHEDRINA 551
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
++ +N P +F+FLL+++AGG G+NL+ + +VLFD DWNP D QA R R GQ K+
Sbjct: 552 IDEYNAPDSEKFIFLLTTRAGGLGINLVTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQ 611
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLST--EDLRDLF 692
V+++RF++ IEE++ +R K L +++ QE A Q L+ E+L D+
Sbjct: 612 VYVFRFITQDAIEERILERATQKLKLDQLVIQE---GRAQQAQKLANNKEELLDMI 664
>gi|389624063|ref|XP_003709685.1| helicase [Magnaporthe oryzae 70-15]
gi|351649214|gb|EHA57073.1| helicase [Magnaporthe oryzae 70-15]
gi|440466607|gb|ELQ35866.1| helicase [Magnaporthe oryzae Y34]
gi|440482590|gb|ELQ63065.1| helicase [Magnaporthe oryzae P131]
Length = 1103
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 262/545 (48%), Gaps = 84/545 (15%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--- 236
+ ++LR +Q +GV FM E GCIL DDMGLGKT+Q A L +
Sbjct: 190 IAQYLRDYQVDGVSFMHEAF------VYQRGCILGDDMGLGKTVQVAAFLTAAFGKTGDF 243
Query: 237 FDGKPMVK---------KAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGI 287
D K M K K ++V P+S++ NW E+ +W +V+ + +DDV+
Sbjct: 244 RDSKRMRKVKRLGRRYYKVLVVCPSSVMENWRQELARWGWWKVE--SYHGPGKDDVLD-- 299
Query: 288 DSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------- 336
T L+V++ + T+R+ + + + S D ++ DE H +K ++
Sbjct: 300 ---TAKSGRLEVMLTTPATYRLQKERVN-TVSWDAVVVDECHNIKERRSEITKAMTEVNA 355
Query: 337 -----LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
LT +N EE + ++N+TNPG G ++ + G+ AT +E +
Sbjct: 356 LCRIGLTGTAIQNKYEELWTLLNWTNPGRFGTFGEWKTSISRPLTLGQSHNATLQELSMA 415
Query: 389 IERSSELSAKV-NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV--- 444
+ + +L + + LRR +L+++ LP K VV C LT LQ+ Y FI S+ V
Sbjct: 416 RKTAKKLVQNLLPDYFLRRMKSLIAHQLPKKRDRVVFCPLTDLQTTAYERFIASEEVELV 475
Query: 445 -------------KRAIS-----EETKQSKILAY--ITALKKLCNHPKLIYDTIKSGNPG 484
KR E+ + +L + I L+ L NH LI I G PG
Sbjct: 476 RRSHELCDCGSGEKRGHCHYKHLEDGRTWNMLVFPCILTLQNLANHLTLIVPKI--GEPG 533
Query: 485 TTGFEDCIRF---FP---PEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR 538
+ R P +++ R D E GK VL LL + D+
Sbjct: 534 DKAEKSLARLRICVPDKWEQLYKLRDSPLIQMDP---EFCGKWRVLKDLL-KFWEGNGDK 589
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSK 597
+++ S+ + L + L + Y Y LDG+ +I +RQ++V+ FN DP +FVFL+S+K
Sbjct: 590 VLVFSHSVKLLQVLRALFQTTHYSYSYLDGSLAIEERQQIVDDFNSDP--QQFVFLISTK 647
Query: 598 AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQR 657
AGG GLN+ N++V+FDP WNP+ D QA R +R GQ + V ++R +S GTIEE VY R
Sbjct: 648 AGGVGLNITSANKVVIFDPHWNPSWDLQAQDRAYRIGQTRDVDVFRLVSQGTIEEIVYAR 707
Query: 658 QMSKE 662
Q+ K+
Sbjct: 708 QIYKQ 712
>gi|348686800|gb|EGZ26614.1| hypothetical protein PHYSODRAFT_476581 [Phytophthora sojae]
Length = 1095
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 168/553 (30%), Positives = 257/553 (46%), Gaps = 78/553 (14%)
Query: 167 DGGNLVPITVDPLLVRF--LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQ 224
D IT P +++F ++P+Q EG+ +M L+ +G++G ILAD+MGLGKTLQ
Sbjct: 138 DDARYTRITQQPSIIKFGTMKPYQLEGLNWMIR-----LHDSGVNG-ILADEMGLGKTLQ 191
Query: 225 SIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDV 283
SI+LL Y +G +G II+ P S V NW E+K+W ++ S +
Sbjct: 192 SISLLAYLREARGIEGPH-----IIIVPKSTVGNWMRELKRWCPS-IKAFKFMGSKDE-- 243
Query: 284 VSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR--- 340
+ T L++SYE + + LLI DEAHR+KN+ + +R
Sbjct: 244 -RALQRETVIKQDFDALVLSYEVAIIEKAILQKIRWRYLLI-DEAHRVKNENSKLSRVVR 301
Query: 341 ----------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEE 384
N+L E +A++NF P + D+ F ++ G+E
Sbjct: 302 EFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDSWFNVDEQEGQENVI---- 357
Query: 385 KKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+L + F+LRR + + + LPPKI + L+ +Q E Y +H
Sbjct: 358 --------KKLHTILRPFLLRRLKSDVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDAT 409
Query: 445 KRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRS 504
+ + ++L + L+K+CNHP L + PG PP
Sbjct: 410 HLNAIGGSDRVRLLNILMQLRKVCNHPYLF----EGAEPG-----------PP------- 447
Query: 505 GSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYL 564
+ G W E GKM +L +LL L Q R+++ T +D+ R + Y
Sbjct: 448 --YQEGPHLW-ENCGKMTLLHKLLPKL-QAQGSRVLIFCQMTSMMDILEDYMRYFGHDYC 503
Query: 565 RLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDK 624
RLDG+T R ++ FN P ++F FLLS++AGG G+NL + ++LFD DWNP D
Sbjct: 504 RLDGSTKGEDRDNMMEEFNAPGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDL 563
Query: 625 QAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLS 684
QA R R GQ K V ++RF++ GT+EEK+ +R K L I Q+ A Q LS
Sbjct: 564 QAMDRAHRIGQTKIVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQ--GRLAQQNRKLS 621
Query: 685 TEDLRDLFTFHDD 697
++L + F D
Sbjct: 622 KDELMTMVRFGAD 634
>gi|290974011|ref|XP_002669740.1| predicted protein [Naegleria gruberi]
gi|284083291|gb|EFC36996.1| predicted protein [Naegleria gruberi]
Length = 1143
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 285/591 (48%), Gaps = 86/591 (14%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
DGG ++ V L F Q+EG++++ + NA G ILAD+MGLGKT+Q
Sbjct: 248 DGGLILDRDVYTKLYSF----QKEGIKWL----NTRFNADKYRGGILADEMGLGKTVQVS 299
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
A L G + ++ +I+ P S++ W +E+ KW + S+++ S
Sbjct: 300 AFL------GGLAQSKTRRYLIIAPLSVLQTWASELDKWAPNIKTFVFHNLSSKEQYNSM 353
Query: 287 IDSFTDPCSSLQ---VLIVSYETFRMHS---SKFSCSESCDLLICDEAHRLKNDQTLTNR 340
F C+ Q +I ++ T ++ + + D+ I DEAH++KNDQT ++
Sbjct: 354 ARDFHG-CAKQQKSAAIITTFRTLVTYTVTLASLCAKQEFDITIVDEAHQIKNDQTGISK 412
Query: 341 N-------------------DLEEFFAMVNFTNPG--ILGDAAYFRRYYETSIICGREPT 379
N L E +++ ++ G ILGD F+ +E SI+ R+
Sbjct: 413 NLRKIGSRAKFCLTGTPIMNKLMEMWSIYDYVFYGDNILGDKKEFKTNFERSIVKSRKRD 472
Query: 380 ATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNH-----------------LPPKII 420
A+ EK LG + S ++ + + +ILRR L S+H + K
Sbjct: 473 ASNTEKVLGNKLSQQMRSLIQPYILRRHKNQVLESDHNVGLGTILKKQSTGKAKISQKNE 532
Query: 421 EVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKS 480
V+ C L+ Q +Y ++ S+ VK+ + +++ +S I + ++ LK LCNHP+L + +
Sbjct: 533 LVLWCYLSKTQDRVYTQYLKSEIVKQILGKKSNRSCIFSALSTLKMLCNHPRLNNGSAQI 592
Query: 481 GNPGTT---GFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDD 537
N FE+ I + + SG +E S K+ ++ +LL ++T
Sbjct: 593 LNKDVNEDEAFENFISEGDDKDYLDTSGMTCK---ELIEESSKLQIIVKLLKE-HKKTGH 648
Query: 538 RIVLVSNYTQTLDLFAQLCRER-RYPYLRLDGTTSISKRQKLVNHFNDPSKNEFV--FLL 594
R ++ S Y LD+ ++ E + LR+DG + +RQ V+ F KN FLL
Sbjct: 649 RTLIFSQYKTMLDIVERIITEHLKLKTLRIDGGVAAKERQARVDLF---QKNNMYSCFLL 705
Query: 595 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKV 654
++ +GG GL L +R++L DP WNPA D+QA R +R GQ K V YR ++ GT+EE V
Sbjct: 706 TTGSGGVGLTLTAADRVILIDPHWNPAVDQQAVDRAYRVGQTKNVVTYRLITVGTLEEVV 765
Query: 655 YQRQMSKEGLQKVIQQEQTDSSATQGN----FLSTEDLRDLFTFHDDVRSE 701
Y+RQ+ K+GL K ++ T+ N F S ++L ++ T D SE
Sbjct: 766 YRRQVIKDGLIK--------NTLTKENQYRYFTSDQELLEVLTLRDKQSSE 808
>gi|134081405|emb|CAK46446.1| unnamed protein product [Aspergillus niger]
Length = 1223
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 187/666 (28%), Positives = 309/666 (46%), Gaps = 132/666 (19%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
D G +P + PLL + Q+ GVQ+++E + G I+ D+MGLGKT+Q I
Sbjct: 413 DNGYRIPGDIHPLLFDY----QKTGVQWLWELQQQQV------GGIIGDEMGLGKTIQVI 462
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW----------VGGRVQLIALC 276
+ L L K + + I+V P +++ W E +W G +
Sbjct: 463 SFLAGLHY----SKKLTRPVIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRN 518
Query: 277 ESTRDDVV--------------SGIDSFTDPCSSL----QVLIVSYETFRMHSS-----K 313
ES+R+D + SG+ + + VL+ +Y + ++S +
Sbjct: 519 ESSREDALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYASLVIPIE 578
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
+ C+ + DE H+++N T +N+L E +++ +F
Sbjct: 579 WGCA------VLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVF 632
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
P LG FR +E I G A+ + + + + L ++ ++L+R ++
Sbjct: 633 PMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAAD 692
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LP K +V+ CKLT Q + Y F+ S+ +K ++ + ++L + L+K+CNHP L
Sbjct: 693 LPKKSEQVLFCKLTKPQRQAYEAFLGSEEMKSILN---GRRQVLFGVDILRKICNHPDLQ 749
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR 534
+ S TTG+ G G+ SGKM V+ LL L +
Sbjct: 750 NHKLMSS---TTGY---------------------GSGS---KSGKMQVVKSLL-ELWKD 781
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVF 592
T + +L + + LD+ + + Y R+DGTT I RQ +V+ FN DPS + VF
Sbjct: 782 TGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAMVDEFNNDPSLH--VF 839
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LL++K GG G+NL G +R++++DPDWNP+ D QA R WR GQK+ V +YR ++ GTIEE
Sbjct: 840 LLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEE 899
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR-----SEIHENMH 707
K+Y RQ+ K+ L I ++ Q DL DLF+ D+ + S+I ++
Sbjct: 900 KIYHRQIFKQFLTNKILRD-----PKQRQTFQLSDLHDLFSLGDEGQGPTETSKIFKDAD 954
Query: 708 CTRCQNYDDGAESIGEGDETNSANKNDQS----DQEVTDIGGFAGLAGCLH----KLKSS 759
T Y+D S G ++N+A K+ S +E DI G+A + + S
Sbjct: 955 VT----YED---SDGTSRKSNAAIKSSASSHSAQEEKKDISKVVGVAAVEQFQGDQEQQS 1007
Query: 760 EKQLGT 765
E++ GT
Sbjct: 1008 EQEKGT 1013
>gi|294656285|ref|XP_458541.2| DEHA2D01672p [Debaryomyces hansenii CBS767]
gi|199431348|emb|CAG86673.2| DEHA2D01672p [Debaryomyces hansenii CBS767]
Length = 1041
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 261/536 (48%), Gaps = 83/536 (15%)
Query: 166 NDGGNLVPITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTL 223
++G +T P V+ LR +Q +G+ ++ L+ ILAD+MGLGKTL
Sbjct: 112 DEGSQRTILTESPSFVKEGTLREYQIQGLNWLISLYENRLSG------ILADEMGLGKTL 165
Query: 224 QSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL--CESTR 280
Q+IA L Y + DG P II+ P S + NW E KW V +I L + R
Sbjct: 166 QTIAFLGYLRYIKKIDG-PF----IIIVPKSTLDNWRREFAKWTPD-VNVIVLQGNKEGR 219
Query: 281 DDVVSGIDSFTDPCSSLQVLIVSYETF---RMHSSKFSCSESCDLLICDEAHRLKN-DQT 336
++V+ + VLI S+E + H KF + ++ DEAHR+KN D +
Sbjct: 220 NEVIQN----KLLNAEFDVLITSFEMVIREKAHLKKFRW----EYIVVDEAHRIKNEDSS 271
Query: 337 LTN------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREP 378
L+ +N+L E +A++NF P + GD+ F ++E +
Sbjct: 272 LSQILRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFNEWFEN------QG 325
Query: 379 TATEEEKKLGIERS-SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNH 437
T+E+K+ ++ +L ++ F+LRR A + L PKI + + +Q + Y
Sbjct: 326 GKTDEDKEKNQDKVIQQLHKVLSPFLLRRIKADVEKSLLPKIETNIYIGMADMQIKWYKK 385
Query: 438 FIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFF 495
+ V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 386 LLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT--------- 435
Query: 496 PPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
D V +GKM +L ++L + + R+++ S ++ LD+
Sbjct: 436 ---------------DEHLVFNAGKMIILDKMLKKFK-KEGSRVLIFSQMSRLLDILEDY 479
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFD 615
C R Y Y R+DG+TS R + ++ +N P ++F+FLL+++AGG G+NL + ++L+D
Sbjct: 480 CYLRDYSYCRIDGSTSHEDRIEAIDQYNMPDSDKFIFLLTTRAGGLGINLTSADIVILYD 539
Query: 616 PDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ 670
DWNP D QA R R GQKK+V +YRF++ IEEKV R K L Q VIQQ
Sbjct: 540 SDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQLVIQQ 595
>gi|317034915|ref|XP_001400735.2| DNA repair protein Rhp26/Rad26 [Aspergillus niger CBS 513.88]
Length = 1214
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 187/666 (28%), Positives = 309/666 (46%), Gaps = 132/666 (19%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
D G +P + PLL + Q+ GVQ+++E + G I+ D+MGLGKT+Q I
Sbjct: 404 DNGYRIPGDIHPLLFDY----QKTGVQWLWELQQQQV------GGIIGDEMGLGKTIQVI 453
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW----------VGGRVQLIALC 276
+ L L K + + I+V P +++ W E +W G +
Sbjct: 454 SFLAGLHY----SKKLTRPVIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRN 509
Query: 277 ESTRDDVV--------------SGIDSFTDPCSSL----QVLIVSYETFRMHSS-----K 313
ES+R+D + SG+ + + VL+ +Y + ++S +
Sbjct: 510 ESSREDALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYASLVIPIE 569
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
+ C+ + DE H+++N T +N+L E +++ +F
Sbjct: 570 WGCA------VLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVF 623
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
P LG FR +E I G A+ + + + + L ++ ++L+R ++
Sbjct: 624 PMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAAD 683
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LP K +V+ CKLT Q + Y F+ S+ +K ++ + ++L + L+K+CNHP L
Sbjct: 684 LPKKSEQVLFCKLTKPQRQAYEAFLGSEEMKSILN---GRRQVLFGVDILRKICNHPDLQ 740
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR 534
+ S TTG+ G G+ SGKM V+ LL L +
Sbjct: 741 NHKLMSS---TTGY---------------------GSGS---KSGKMQVVKSLL-ELWKD 772
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVF 592
T + +L + + LD+ + + Y R+DGTT I RQ +V+ FN DPS + VF
Sbjct: 773 TGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAMVDEFNNDPSLH--VF 830
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LL++K GG G+NL G +R++++DPDWNP+ D QA R WR GQK+ V +YR ++ GTIEE
Sbjct: 831 LLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEE 890
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR-----SEIHENMH 707
K+Y RQ+ K+ L I ++ Q DL DLF+ D+ + S+I ++
Sbjct: 891 KIYHRQIFKQFLTNKILRD-----PKQRQTFQLSDLHDLFSLGDEGQGPTETSKIFKDAD 945
Query: 708 CTRCQNYDDGAESIGEGDETNSANKNDQS----DQEVTDIGGFAGLAGCLH----KLKSS 759
T Y+D S G ++N+A K+ S +E DI G+A + + S
Sbjct: 946 VT----YED---SDGTSRKSNAAIKSSASSHSAQEEKKDISKVVGVAAVEQFQGDQEQQS 998
Query: 760 EKQLGT 765
E++ GT
Sbjct: 999 EQEKGT 1004
>gi|255550546|ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
gi|223544553|gb|EEF46070.1| ATP binding protein, putative [Ricinus communis]
Length = 1109
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 270/566 (47%), Gaps = 89/566 (15%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
+ L PHQR+G+++++ L+ G G IL DDMGLGKT+Q L G
Sbjct: 397 IATMLYPHQRDGLKWLWS-----LHCLG-KGGILGDDMGLGKTMQICGFL-----AGLFH 445
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL-- 297
++K+A++V P +L+++W E+ + L TR+ + + + +
Sbjct: 446 SRLIKRALVVAPKTLLAHWIKELAA--------VGLSRKTREYFGTSLKARQYELQYILQ 497
Query: 298 --QVLIVSYETFRMHSSK------FSCSES-----CDLLICDEAHRLKNDQTLTNR---- 340
+L+ +Y+ R +S F+ ES D +I DE H +KN T +
Sbjct: 498 DKGILLTTYDIVRNNSKSLRGDDYFADEESEDGYTWDYMILDEGHLIKNPSTQRAKSLLE 557
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
N+L+E + + NF+ P +LGD F++ YE I+ G E A+ EK
Sbjct: 558 IPSAHRIIISGTPIQNNLKELWTLFNFSCPNLLGDYNGFKKKYEHPILRGNEKNASAREK 617
Query: 386 KLGIERSSELSAKVNQFILRR-------TNALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
+G + EL ++ + LRR + L + L K +V +LT Q ELY F
Sbjct: 618 HVGSTIAKELRERIQPYFLRRLKNEVFKEDDLTTATLSKKNEMIVWLRLTSCQRELYRAF 677
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKL--------IYDTIKSGNPGTTGFED 490
+ S+ V A LA +T LKK+C+HP L + + + +P G +
Sbjct: 678 LQSELVLSAFD-----GSPLAALTILKKICDHPLLLTKRAAEDVLEGMDFISPEDAGLAE 732
Query: 491 CIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLL--GHLRQRTDDRIVLVSNYTQT 548
+ ++ + ++ D ++S M +L L+ GH +++ S +
Sbjct: 733 KLALHVADV-AEKAEFQEKHDNISCKISFIMSLLDNLIPEGH-------NVLIFSQSRKM 784
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
L+L Y +LR+DGTT S R K+VN F + +FLL+S+ GG GL L
Sbjct: 785 LNLIQDSLASNGYEFLRIDGTTKASDRVKIVNDFQE-GVGAPIFLLTSQVGGLGLTLTKA 843
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+R+++ DP WNP+ D Q+ R +R GQ+K V +YR ++ GT+EEK+Y++Q+ K GL K
Sbjct: 844 DRVIVVDPAWNPSTDNQSVDRAYRIGQRKDVLVYRLMTCGTVEEKIYRKQIFKGGLFKTA 903
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTF 694
+ + Q + S +DLR+LF+
Sbjct: 904 TEHK-----EQIRYFSQQDLRELFSL 924
>gi|449499854|ref|XP_002191591.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Taeniopygia
guttata]
Length = 1005
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 250/509 (49%), Gaps = 75/509 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 132 LRDYQIRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 185
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLI 301
V + P S + NW E K+WV L A+C +D + + P V +
Sbjct: 186 V-----LVPKSTLQNWMNEFKRWVPT---LRAVCLIGDKDQRAAFVRDVLLP-GEWDVCV 236
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------ND 342
SYE S F + L+ DEAHR+KN+++ TNR N+
Sbjct: 237 TSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 295
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + A F +++T+ G ++KL +ER L + F
Sbjct: 296 LHELWALLNFLLPDVFNSAEDFDSWFDTNNCLG--------DQKL-VER---LHMVLRPF 343
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
+LRR A + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 344 LLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILM 403
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 404 QLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHLVTNSGKMV 438
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T ++RQ +N F
Sbjct: 439 VLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAF 497
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
NDP ++FVF+LS++AGG G+NL + ++L+D DWNP D QA R R GQ K V ++
Sbjct: 498 NDPDSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVF 557
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
RF++ T+EE++ +R K L ++ Q+
Sbjct: 558 RFITDNTVEERIVERAEMKLRLDSIVIQQ 586
>gi|126331506|ref|XP_001377204.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Monodelphis
domestica]
Length = 1050
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 178 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 231
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW E K+WV G + Q A RD ++ G
Sbjct: 232 V-----LVPKSTLHNWMNEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 276
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 277 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 333
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E +A++NF P + A F +++T+ G ++KL +ER
Sbjct: 334 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 381
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 382 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 441
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 442 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 476
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ D R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 477 VTNSGKMVVLDKLLPKLKEQ-DSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 535
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ ++FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 536 RQDSINAYNEPNSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 595
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 596 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 632
>gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like
[Meleagris gallopavo]
Length = 1043
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 247/508 (48%), Gaps = 73/508 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ +M L G++G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 168 LRDYQVRGLNWMIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 221
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L A+C D + V +
Sbjct: 222 V-----LVPKSTLHNWMNEFKRWVPS---LRAVCLIGDKDARAAFIRDVMMPGEWDVCVT 273
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------NDL 343
SYE S F + L+ DEAHR+KN+++ TNR N+L
Sbjct: 274 SYEMVIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNL 332
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 333 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 380
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR A + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 381 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQ 440
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D + SGKM V
Sbjct: 441 LRKCCNHPYL-FDGAEPGPPYTT------------------------DTHLITNSGKMLV 475
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL LR++ R++L S T+ LD+ C R Y Y RLDG T +R++ ++ FN
Sbjct: 476 LDKLLAKLREQ-GSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 534
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 535 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 594
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
++ T+EE++ +R K L ++ Q+
Sbjct: 595 LITDNTVEERIVERAEIKLRLDSIVIQQ 622
>gi|449273767|gb|EMC83176.1| putative global transcription activator SNF2L1, partial [Columba
livia]
Length = 982
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 247/508 (48%), Gaps = 73/508 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ +M L G++G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 107 LRDYQVRGLNWMIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 160
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L A+C D + V +
Sbjct: 161 V-----LVPKSTLHNWMNEFKRWVPS---LRAVCLIGDKDARAAFIRDVMMPGEWDVCVT 212
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------NDL 343
SYE S F + L+ DEAHR+KN+++ TNR N+L
Sbjct: 213 SYEMVIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNL 271
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 272 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 319
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR A + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 320 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQ 379
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D + SGKM V
Sbjct: 380 LRKCCNHPYL-FDGAEPGPPYTT------------------------DTHLITNSGKMLV 414
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL LR++ R++L S T+ LD+ C R Y Y RLDG T +R++ ++ FN
Sbjct: 415 LDKLLAKLREQ-GSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 473
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 474 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 533
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
++ T+EE++ +R K L ++ Q+
Sbjct: 534 LITDNTVEERIVERAEIKLRLDSIVIQQ 561
>gi|224099763|ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222851428|gb|EEE88975.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1131
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 242/516 (46%), Gaps = 67/516 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LRP+Q EG+Q+M + LN ILAD+MGLGKT+Q+I+L+ L + K +
Sbjct: 417 LRPYQLEGLQWMLSLFNNNLNG------ILADEMGLGKTIQTISLIAYLK----ETKGIC 466
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+IV P +++ NW E W+ ++ A R + I +LQVLI
Sbjct: 467 GPHLIVAPKAVLPNWVNEFSTWIEEN-EIKAFLYDGRLEERKAIREQLSREGNLQVLITH 525
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKNDQ----------------TLTN---RNDLE 344
Y+ M F +I DE HRLKN + LT +N L+
Sbjct: 526 YDLI-MRDKAFLKKIHWQYMIVDEGHRLKNHECALAKTIAGYQLKRRLLLTGTPIQNSLQ 584
Query: 345 EFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFIL 404
E ++++NF P I F ++ E + T+EE+ L I R L + FIL
Sbjct: 585 ELWSLLNFLLPHIFNSEDKFEEWFNAPFADRGEVSLTDEEQLLIIRR---LHNVIRPFIL 641
Query: 405 RRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA- 463
RR + +LP K ++ C L+ Q Y V + + +SK L +T
Sbjct: 642 RRKKDEVEKYLPGKSQVILKCDLSAWQKVYYQQVTEMGRV--GLQNGSGKSKSLQNLTMQ 699
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L F G W + + SGK +
Sbjct: 700 LRKCCNHPYL--------------------------FVGDYNMWRKDE--IMRASGKFEL 731
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L RLL L TD R++L S T+ +D+ + Y YLRLDG+T +R L+ FN
Sbjct: 732 LDRLLPKL-HATDHRVLLFSQMTRLMDILEIYLQLHDYKYLRLDGSTKTEERGTLLKKFN 790
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P F+FLLS++AGG GLNL + +++FD DWNP D+QA R R GQKK V ++
Sbjct: 791 APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFV 850
Query: 644 FLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSAT 678
+S G++EE + +R K+G+ KVIQ ++++T
Sbjct: 851 LVSVGSVEEVILERAKQKKGIDAKVIQAGLFNTTST 886
>gi|407396862|gb|EKF27569.1| transcription activator, putative [Trypanosoma cruzi marinkellei]
Length = 1113
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/562 (29%), Positives = 265/562 (47%), Gaps = 97/562 (17%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G +++ +T P +R LRP+Q EGV ++ S +N ILAD+MGLGKTLQ+I
Sbjct: 151 GFDVLHLTETPSYIRGKLRPYQIEGVNWLLGLFSRNING------ILADEMGLGKTLQTI 204
Query: 227 ALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG------------RVQLI 273
A L Y G G +V V P S++ NW E+K+W R QLI
Sbjct: 205 ATLAYLKFTYGLPGPHLV-----VCPKSVMGNWYRELKQWCPALNAFKFHGIGEIRPQLI 259
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN 333
D + I ++ +++I TF+ + ++ LI DEAH+LKN
Sbjct: 260 KSHLQPHDKLKYDI-----VVTTFEMVIEELPTFKRINWQY--------LIVDEAHKLKN 306
Query: 334 DQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
++ + +N+L+E +A+++F P + +A F +++T+
Sbjct: 307 EEGRVHTALDSLNTNHRLIITGTPLQNNLKELWALLHFLAPRLFDNAESFEEWFDTA--S 364
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL 434
G++ + S + + ++RR + +S +PPK V CKLT Q +
Sbjct: 365 GQQDSNA----------MSNMHKILAPLMIRRVKSEVSTGIPPKKEIYVACKLTKTQRKW 414
Query: 435 YNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRF 494
Y H + + S + + L+K+ NHP ++ D + G P T
Sbjct: 415 YMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMM-DGGEEGPPFIT-------- 465
Query: 495 FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR--IVLVSNYTQTLDLF 552
D V+ SGKM +L +LL LR+ +++ +++ S +T LD+
Sbjct: 466 ----------------DERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDIL 509
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
C R + R+DG TS R + FN P+ + F+FLLS++AGG G+NL N +V
Sbjct: 510 EDYCGMRGFRVCRIDGNTSGYDRDAQMAAFNSPNSDYFIFLLSTRAGGLGINLQAANHVV 569
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQ 672
++D DWNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L ++ Q
Sbjct: 570 IYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQ-H 628
Query: 673 TDSSATQGNFLSTEDLRDLFTF 694
GN +S E+L + F
Sbjct: 629 GRMQGRGGNNVSKEELLSMIKF 650
>gi|443692402|gb|ELT93996.1| hypothetical protein CAPTEDRAFT_18898 [Capitella teleta]
Length = 910
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 265/544 (48%), Gaps = 104/544 (19%)
Query: 178 PLLVRF-----------LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
P++ RF +R +Q G+ +M L GI+G ILAD+MGLGKTLQ+I
Sbjct: 46 PVITRFESSPSYIKGGEMRDYQVRGLNWMIS-----LYEHGING-ILADEMGLGKTLQTI 99
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW---------VGGRVQLIALCE 277
+LL + + + P +I+ P S + NW AE+++W +G + + A+
Sbjct: 100 SLLGYM--KHYRNIP--SPHLIIAPKSTLMNWMAELERWCPTLRSICLIGDQEKRAAMI- 154
Query: 278 STRDDVVSGIDSFTDPC-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT 336
RD+++ G D C SS +++I F+ + ++ L+ DEAHR+KN+++
Sbjct: 155 --RDEILPGE---WDVCVSSYEMVIKEKSVFKKFNWRY--------LVIDEAHRIKNEKS 201
Query: 337 ----------------LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGRE 377
LT +N+L E +A++NF P + A F ++ TS +
Sbjct: 202 KLSEIVREFKSASRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFNTSNCFEND 261
Query: 378 PTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNH 437
T L A + F+LRR A + L PK V L+ +Q E Y
Sbjct: 262 DLVTR------------LHAVLRPFLLRRIKADVEKRLLPKKETKVYIGLSKMQREWYTK 309
Query: 438 FIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPP 497
+ + ++ + ++L + L+K CNHP L +D + G P TT
Sbjct: 310 ILMKDIDVVNGAGKSDKMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT----------- 357
Query: 498 EMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
D V+ GKM +L +LL L Q D R+++ S T+ LD+ C
Sbjct: 358 -------------DQHLVDNCGKMVLLDKLLPKL-QEQDSRVLIFSQMTRILDILEDYCY 403
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+ Y Y RLDG T+ RQK +N FN P+ +FVF+LS++AGG G+NL + +VLFD D
Sbjct: 404 WKNYNYCRLDGQTAHEDRQKSINEFNAPNSTKFVFMLSTRAGGLGINLATADVVVLFDSD 463
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE--QTDS 675
WNP D QA R R GQKK+V ++RFL+ T+EE++ +R K L V+ Q+ DS
Sbjct: 464 WNPQVDLQAMDRAHRIGQKKQVRVFRFLTENTVEERIVERAEMKLRLDSVVIQQGRLQDS 523
Query: 676 SATQ 679
+A++
Sbjct: 524 NASK 527
>gi|224081014|ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222855713|gb|EEE93260.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1058
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/566 (28%), Positives = 274/566 (48%), Gaps = 86/566 (15%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
+ + L PHQREG+++++ L+ G G IL DDMGLGKT+Q + L L F
Sbjct: 363 IAKMLYPHQREGLRWLWS-----LHCQG-KGGILGDDMGLGKTMQICSFLAGL----FHS 412
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSL-- 297
K ++K+A++V P +L+S+W E+ ++ L TR+ + + + +
Sbjct: 413 K-LIKRALVVAPKTLLSHWIKEL--------SVVGLSAKTREYFGTSLKARDYELQYILQ 463
Query: 298 --QVLIVSYETFRMHSSK------FSCSES-----CDLLICDEAHRLKNDQTLTNR---- 340
+L+ +Y+ R +S F ES D +I DE H +KN T +
Sbjct: 464 DKGILLTTYDIVRNNSKSLRGDHYFIDDESEDSYIWDYMILDEGHLIKNPSTQRAKSLLE 523
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
N+L+E +A+ NF PG+LGD +F+ YE I+ G E A++ EK
Sbjct: 524 IPSAHCIVISGTPIQNNLKELWALFNFCCPGLLGDNKWFKETYEHPILRGNEKNASDREK 583
Query: 386 KLGIERSSELSAKVNQFILRRT-------NALLSNHLPPKIIEVVCCKLTPLQSELYNHF 438
++G + EL ++ + LRR + + L K +V +LT Q +LY F
Sbjct: 584 RIGSTVAKELRERIQPYFLRRMKNEVFKEDDATTAKLSRKNEIIVWLRLTACQRQLYEAF 643
Query: 439 IHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPE 498
+ S+ V A LA +T LKK+C+HP L+ T ++ G E + P +
Sbjct: 644 LRSEIVLSAFD-----GSPLAALTILKKICDHPLLL--TKRAAEDLLEGMESMLN--PED 694
Query: 499 MFSGRSGSWTGGDGA----------WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
+ D A +S K+ + LL +L + +++ S +
Sbjct: 695 AAVAEKLAMHLADVADRTDTDFQEKHDNISCKISFILSLLDNLIPEGHN-VLIFSQTRKM 753
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
L+L + Y ++R+DGTT + R K+V+ F + +FLL+S+ GG GL L
Sbjct: 754 LNLIQESLVSNGYEFIRIDGTTKATDRTKIVSDFQE-GNGAPIFLLTSQVGGLGLTLTKA 812
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+R+++ DP WNP+ D Q+ R +R GQ K V +YR ++ G++EEK+Y++Q+ K GL +
Sbjct: 813 DRVIVVDPAWNPSTDNQSVDRAYRIGQMKDVVVYRLMTCGSVEEKIYRKQIFKGGLFRTA 872
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTF 694
+ + Q + S +DLR+LF+
Sbjct: 873 TENK-----EQIRYFSQQDLRELFSL 893
>gi|400602611|gb|EJP70213.1| chromatin remodeling complex SWI/SNF, component SWI2 and ATPase
[Beauveria bassiana ARSEF 2860]
Length = 1404
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 253/543 (46%), Gaps = 85/543 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+ +Q +G+Q+M + LN ILAD+MGLGKT+Q+I+L+ L+ + P
Sbjct: 533 LKEYQVKGLQWMISLYNNNLNG------ILADEMGLGKTIQTISLITYLIERKQQSGPY- 585
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA-----LCESTRDDVVSGIDSFTDPCSSLQ 298
+++ P S ++NW E +KW G +++ + ++ + G Q
Sbjct: 586 ---LVIVPLSTLTNWNLEFEKWAPGISRIVYKGPPNARKQQQEKIRQG---------RFQ 633
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT-----------------LTN-- 339
VL+ +YE S + ++I DE HR+KN + LT
Sbjct: 634 VLLTTYEYIIKDRPILSKIKWFHMII-DEGHRMKNSNSKLSATIQQYYNTRFRLILTGTP 692
Query: 340 -RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSI--ICGREPTA-TEEEKKLGIERSSEL 395
+N+L E +AM+NF P I A F ++ T G++ TEEE+ L I R L
Sbjct: 693 LQNNLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKIELTEEEQILVIRR---L 749
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI-HSK-NVKRAISEETK 453
+ F+LRR + LP K +V+ CK + LQS+LY + H+K V +T
Sbjct: 750 HKVLRPFLLRRLKKDVEKDLPDKTEKVIKCKFSALQSKLYKQMVTHNKIAVGDGKGGKTG 809
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ I L+KLCNHP + + NP + D
Sbjct: 810 ARGLSNMIMQLRKLCNHPFVFSEVENVMNPLSIS----------------------NDIL 847
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
W +GK +L R+L Q T R+++ T +D+ R RR YLRLDGTT
Sbjct: 848 W-RTAGKFELLDRILPKY-QATGHRVLMFFQMTAIMDIMEDYLRYRRMEYLRLDGTTKSD 905
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+R L++ FN P FVFLLS++AGG GLNL + ++++D DWNP D QA R R
Sbjct: 906 ERSDLLHDFNSPDSKYFVFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRI 965
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ-------QEQTDSSATQGNFLST 685
GQK V I R +S+ ++EEK+ +R K + KVIQ +TD A L T
Sbjct: 966 GQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLET 1025
Query: 686 EDL 688
D+
Sbjct: 1026 ADM 1028
>gi|169610587|ref|XP_001798712.1| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
gi|160702104|gb|EAT84675.2| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
Length = 1203
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 275/594 (46%), Gaps = 112/594 (18%)
Query: 152 GVDPLVLWQPEEPQN--DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIH 209
G + L P EP DGG +P + P L + Q+ GVQ+++E +
Sbjct: 361 GEEECFLPHPTEPDTEFDGGFRIPGDIFPALFDY----QKTGVQWLWELYQQNV------ 410
Query: 210 GCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG- 268
G I+ D+MGLGKT+Q+I+ + G + K +IV W E KW
Sbjct: 411 GGIIGDEMGLGKTIQAISFV-----AGLHYSKQLTKPVIV--------WVNEFHKWWPAL 457
Query: 269 RVQLI-----ALCESTRDDVVS---GIDSFTDPCSSL------------------QVLIV 302
RV ++ + ++ R+D + + S+ D ++L VL+
Sbjct: 458 RVSILHTSGSGMLDTRREDRLEREMELRSYGDYDATLTGAGKQAKKILERVKHDGHVLVT 517
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------NDL 343
+Y + +S +F + I DE H+++N T NR N+L
Sbjct: 518 TYSGLQTYS-EFLIPTDWECAILDEGHKIRNPNTSITIHCKELRTPNRIILSGTPMQNNL 576
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +++ +F P LG FR +E I G A+ E + ++ + L V+ ++
Sbjct: 577 TELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANASNLEFETAVQCAETLKDAVSPYL 636
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
L+R + ++ LP K +V+ CKLT Q Y F+ S+++K +IS +Q +L +
Sbjct: 637 LQRFKSDVATDLPQKKEQVLFCKLTRQQRLAYEGFLASEDMK-SISSGKRQ--MLYGVDY 693
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K+CNHP L S PG D SGKM V
Sbjct: 694 LRKICNHPDLTEHKTLSKQPGY-------------------------DYGAPNKSGKMQV 728
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTTSISKRQKLVNHF 582
+ LL L ++ + +L + + LD+ + Y R+DG T+I RQ LV+ F
Sbjct: 729 VKELLS-LWKKGGHKTLLFAQHRIMLDILQKFLDHIPEINYRRMDGETAIKNRQDLVDEF 787
Query: 583 N-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
N DP N VFLL++K GG G+NL G NR++++DPDWNP+ D QA R WR GQK+ V I
Sbjct: 788 NNDP--NLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEI 845
Query: 642 YRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
YR +S GTIEEK+Y RQ+ K+ L KV++ + Q DL DLFT
Sbjct: 846 YRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPK------QRQTFQMSDLHDLFTL 893
>gi|408391786|gb|EKJ71154.1| hypothetical protein FPSE_08660 [Fusarium pseudograminearum CS3096]
Length = 1163
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 175/610 (28%), Positives = 279/610 (45%), Gaps = 110/610 (18%)
Query: 161 PEEPQNDGGN--LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
P+ P D G+ +P + P L + Q+ GVQ++ E + G I+ D+MG
Sbjct: 377 PDFPDYDFGDGLKLPGDIHPSLFGY----QKTGVQWLAELYKQNV------GGIIGDEMG 426
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---- 273
LGKT+Q IA + L K + + I+V P +L+ W +E +W RV ++
Sbjct: 427 LGKTVQLIAFIAALHY----SKKLRRPVIVVAPATLLRQWVSEFHRWWPPLRVSILHASG 482
Query: 274 ---------------------ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSS 312
++ +V+G+ S VL+ +Y + ++
Sbjct: 483 SGMMNPKFEDEYDLDHYKPLATKSQNAASRIVNGV------AKSGHVLVTTYTGLQTYAD 536
Query: 313 KFSCSESCDLLICDEAHRLKN---DQTLT-------NR---------NDLEEFFAMVNFT 353
E D + DE H+++N + T+T NR N+L E +++ +F
Sbjct: 537 TLLPVE-WDYAVLDEGHKIRNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFI 595
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
P LG FR +E I G A+ + + + L + +++L+R ++
Sbjct: 596 YPMRLGTLVNFRAQFEIPIRQGGYANASNLQVMTAEKCAEALKETIGEYLLQRLKVDVAA 655
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKL 473
LP K +V+ CKLT Q + Y FI S V AI +QS L I L+K+CNHP L
Sbjct: 656 DLPEKTEQVLFCKLTEGQHKAYETFIKSDEVS-AILNRRRQS--LYGIDILRKICNHPDL 712
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
+ ++ G G D +LS K+ + LL +
Sbjct: 713 LDKSL--------------------------GKKAGYDFGNPKLSAKLQLTKDLLQKVMI 746
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
+ +L S Q LD+ + E Y+R+DG T + +RQ +++ FN+ S + VFL
Sbjct: 747 PNGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDRRQTMIDKFNE-SPDIHVFL 805
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
++++ GG G NL G +R+++FDPDWNP+ D QA R WR GQKK V IYR ++ GTIEEK
Sbjct: 806 MTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRLMTEGTIEEK 865
Query: 654 VYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV-----RSEIHENMH 707
+Y RQ+ K+ + KV++ + SS DL DLF+F+ RSEI +
Sbjct: 866 IYHRQIFKQFMTNKVLKDPKQRSS------YDLSDLYDLFSFNTGKDATANRSEIFKKAQ 919
Query: 708 CTRCQNYDDG 717
+ +DG
Sbjct: 920 VSLANGDEDG 929
>gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gibberella zeae PH-1]
Length = 1163
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 179/642 (27%), Positives = 290/642 (45%), Gaps = 110/642 (17%)
Query: 161 PEEPQNDGGN--LVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMG 218
P+ P D G+ +P + P L + Q+ GVQ++ E + G I+ D+MG
Sbjct: 377 PDFPDYDFGDGLKLPGDIHPSLFGY----QKTGVQWLAELYKQNV------GGIIGDEMG 426
Query: 219 LGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLI---- 273
LGKT+Q IA + L K + + I+V P +L+ W +E +W RV ++
Sbjct: 427 LGKTVQLIAFIAALHY----SKKLRRPVIVVAPATLLRQWVSEFHRWWPPLRVSILHASG 482
Query: 274 ---------------------ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSS 312
+ +V+G+ S VL+ +Y + ++
Sbjct: 483 SGMMNPKFEDEYDLDHYKPLATKSQKAASRIVNGV------AKSGHVLVTTYTGLQTYAD 536
Query: 313 KFSCSESCDLLICDEAHRLKN---DQTLT-------NR---------NDLEEFFAMVNFT 353
E D + DE H+++N + T+T NR N+L E +++ +F
Sbjct: 537 TLLPVE-WDYAVLDEGHKIRNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFI 595
Query: 354 NPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSN 413
P LG FR +E I G A+ + + + L + +++L+R ++
Sbjct: 596 YPMRLGTLVNFRAQFEIPIRQGGYANASNLQVMTAEKCAEALKETIGEYLLQRLKVDVAA 655
Query: 414 HLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKL 473
LP K +V+ CKLT Q + Y FI S V AI +QS L I L+K+CNHP L
Sbjct: 656 DLPEKTEQVLFCKLTEGQHKAYETFIKSDEVS-AILNRRRQS--LYGIDILRKICNHPDL 712
Query: 474 IYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ 533
+ ++ G G D +LS K+ + LL +
Sbjct: 713 LDKSL--------------------------GKKAGYDFGNPKLSAKLQLTKDLLQKVMI 746
Query: 534 RTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFL 593
+ +L S Q LD+ + E Y+R+DG T + +RQ +++ FN+ S + VFL
Sbjct: 747 PNGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDRRQTMIDKFNE-SPDIHVFL 805
Query: 594 LSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEK 653
++++ GG G NL G +R+++FDPDWNP+ D QA R WR GQKK V IYR ++ GTIEEK
Sbjct: 806 MTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRLMTEGTIEEK 865
Query: 654 VYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV-----RSEIHENMH 707
+Y RQ+ K+ + KV++ + SS DL DLF+F+ RSEI +
Sbjct: 866 IYHRQIFKQFMTNKVLKDPKQRSS------YDLSDLYDLFSFNTGKDATANRSEIFKKAQ 919
Query: 708 CTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGL 749
+ +DG ++ + + D+ E+ +G A +
Sbjct: 920 VSLTNGDEDGNGNLDPKHVGSPDREKDKERMELKQMGLVAAM 961
>gi|449498933|ref|XP_002192409.2| PREDICTED: probable global transcription activator SNF2L1-like
[Taeniopygia guttata]
Length = 1185
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 246/508 (48%), Gaps = 73/508 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ +M L G++G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 310 LRDYQVRGLNWMIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 363
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L A+C D + V +
Sbjct: 364 V-----LVPKSTLHNWMNEFKRWVPS---LRAVCLIGDKDARAAFIRDVMMPGEWDVCVT 415
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------NDL 343
SYE S F + L+ DEAHR+KN+++ TNR N+L
Sbjct: 416 SYEMVIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNL 474
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 475 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 522
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 523 LRRIKGEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQ 582
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D + SGKM V
Sbjct: 583 LRKCCNHPYL-FDGAEPGPPYTT------------------------DTHLITNSGKMLV 617
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL LR++ R++L S T+ LD+ C R Y Y RLDG T +R++ ++ FN
Sbjct: 618 LDKLLAKLREQ-GSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 676
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 677 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 736
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
++ T+EE++ +R K L ++ Q+
Sbjct: 737 LITDNTVEERIVERAEIKLRLDSIVIQQ 764
>gi|149248292|ref|XP_001528533.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448487|gb|EDK42875.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 917
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 253/519 (48%), Gaps = 75/519 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LRP+Q +G+ ++ N +GI LAD+MGLGKTLQSI+ L Y G +G +
Sbjct: 25 LRPYQVQGLNWLVSLYEN--NLSGI----LADEMGLGKTLQSISFLGYLRFMHGINGPHL 78
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E +W+ + + L + +++ I + C V+I
Sbjct: 79 V-----IAPKSTLDNWHREFNRWIP-EINAVVL-QGDKEERSELIKNRIMTCD-FDVIIA 130
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
SYE S F + + ++ DEAHR+KN+++L ++ N+L
Sbjct: 131 SYEIVIREKSTFK-KFNWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNL 189
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + D F +++ + +EE++++ ++ L + F+
Sbjct: 190 RELWALLNFILPDVFADNESFDEWFQNN-------DNSEEDQEVILQ----LHKVLKPFL 238
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK--ILAYI 461
LRR A + L PK V K+TP+Q LY I K++ K+SK +L +
Sbjct: 239 LRRIKADVEKSLLPKKEINVYTKMTPMQRNLYQK-ILEKDIDAVNGANKKESKTRLLNIV 297
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
L+K CNHP L +D ++ G P TT D V + KM
Sbjct: 298 MQLRKCCNHPYL-FDGVEPGPPFTT------------------------DEHLVFNAQKM 332
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L +LL + R+++ S ++ LD+ C R Y Y R+DG T R ++
Sbjct: 333 IILDKLLKKFKAE-GSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHVDRINAIDE 391
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
+N P +FVFLL+++AGG G+NL + ++LFD DWNP D QA R R GQ K+V +
Sbjct: 392 YNKPGSEKFVFLLTTRAGGLGINLTSADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKV 451
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQG 680
+RF++ IEEKV +R K L +++ Q+ +++ G
Sbjct: 452 FRFITENAIEEKVLERAAQKLRLDQLVIQQGRNTAGLDG 490
>gi|354546892|emb|CCE43624.1| hypothetical protein CPAR2_212680 [Candida parapsilosis]
Length = 1022
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 258/538 (47%), Gaps = 81/538 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LRP+Q +G+ ++ N +GI LAD+MGLGKTLQ+I+ L Y +G +
Sbjct: 132 LRPYQIQGLNWLVSLYEN--NLSGI----LADEMGLGKTLQTISFLGYLRFMYKINGPHL 185
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E ++W+ + ++ L + +D+ I + C V++
Sbjct: 186 V-----IAPKSTLDNWYREFQRWIPD-INVLVL-QGDKDERSDMIKNRVMTCD-FDVIVA 237
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
SYE + F + + ++ DEAHR+KN+++L ++ N+L
Sbjct: 238 SYEIVIREKATFKKFD-WEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNL 296
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + D F +++ ++E E S+L + F+
Sbjct: 297 RELWALLNFILPDVFADTDSFDEWFQ------------KDETSEDGEVISQLHKVLKPFL 344
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK--ILAYI 461
LRR A + L PK + K+TP+Q LY I K++ K+SK +L +
Sbjct: 345 LRRIKADVEKSLLPKKELNIYTKMTPMQKNLYQK-ILEKDIDAVNGANKKESKTRLLNIV 403
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
L+K CNHP L +D ++ G P TT D V + KM
Sbjct: 404 MQLRKCCNHPYL-FDGVEPGPPYTT------------------------DEHLVYNAQKM 438
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L +LL + R+++ S ++ LD+ C R +PY R+DG T + R ++
Sbjct: 439 IILDKLLKKFKTE-GSRVLIFSQMSRMLDILEDYCYFREFPYCRIDGQTEHADRINAIDE 497
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
+N P +FVFLL+++AGG G+NL + ++LFD DWNP D QA R R GQ K+V +
Sbjct: 498 YNKPGSEKFVFLLTTRAGGLGINLTTADVVILFDSDWNPQADLQAMDRAHRIGQTKQVKV 557
Query: 642 YRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDS----SATQGNFLSTEDLRDLFTF 694
+RF++ IEEKV +R K L Q VIQQ + ++ G S +L D+ F
Sbjct: 558 FRFITENAIEEKVLERATQKLRLDQLVIQQGRNNTVGLDGQQSGKAASKNELLDMIQF 615
>gi|449451303|ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
sativus]
Length = 1016
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 268/563 (47%), Gaps = 81/563 (14%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDG 239
+ L PHQR+G+Q+++ L+ G G IL DDMGLGKT+Q L L
Sbjct: 325 IATMLYPHQRDGLQWLWS-----LHCLG-KGGILGDDMGLGKTMQICGFLAGLFYS---- 374
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGID----SFTDPCS 295
++K+ ++V P +L+ +W E+ ++ L E TR+ +
Sbjct: 375 -RLIKRVLVVAPKTLLPHWIKEL--------SVVGLSEKTREYYGTSAKLRQYELNYILQ 425
Query: 296 SLQVLIVSYETFRMHSSK-----FSCSE------SCDLLICDEAHRLKNDQTLTNR---- 340
VL+ +Y+ R +S FS E + D +I DE H +KN T +
Sbjct: 426 DKGVLLTTYDIVRNNSKSLQGNCFSEDEETEDGTTWDYMILDEGHLIKNPSTQRAKSLLD 485
Query: 341 ---------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEK 385
N+L+E +A+ NF P +LGD +F+ +YE++I+ G + A+E +K
Sbjct: 486 IPSAHRIIISGTPLQNNLKELWALFNFCCPDLLGDKHWFKEHYESAILRGNDKKASERDK 545
Query: 386 KLGIERSSELSAKVNQFILRRTNALLSNH--------LPPKIIEVVCCKLTPLQSELYNH 437
++G + L ++ + LRR + + N L K +V +LT Q +LY
Sbjct: 546 RIGSVVAKGLRERIQPYFLRRMKSEVFNEDNDQAATKLSKKNDIIVWLRLTSCQRQLYEA 605
Query: 438 FIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR---F 494
F+ S A +LA +T LKK+C+HP L+ T ++ G E +
Sbjct: 606 FLKSDLALSAFD-----GSVLAALTILKKICDHPLLL--TKRAAEEVLEGMETVLSPEDA 658
Query: 495 FPPEMFSGRSGSWTGGDGAWV---ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDL 551
E + R D V +S K+ + LL +L + I++ S + L L
Sbjct: 659 GVAEKLAKRLADVVDRDFYEVYDDNVSCKISFIMSLLDNLVPKGHS-ILIFSQTRKMLSL 717
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
+ Y +LR+DGTT R K+VN F + + +FLL+S+ GG GL L +R+
Sbjct: 718 LEKSLLSNDYEFLRIDGTTKAMDRVKIVNDFQE-GRGASIFLLTSQVGGLGLTLTRADRV 776
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
++ DP WNP+ D Q+ R +R GQKK V +YR ++ GT+EEK+Y++Q+ K GL K +
Sbjct: 777 IVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTCGTVEEKIYRKQVYKGGLFKTATEH 836
Query: 672 QTDSSATQGNFLSTEDLRDLFTF 694
+ Q + S +DLR+LF+
Sbjct: 837 K-----EQIRYFSQQDLRELFSL 854
>gi|224093501|ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222852831|gb|EEE90378.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1108
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 284/596 (47%), Gaps = 89/596 (14%)
Query: 157 VLWQPEEPQNDGGNLVP-----ITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGC 211
VL E ++DG ++P + + + L PHQ EG+++++ L+ G G
Sbjct: 357 VLENHAESEDDGSIILPGLKSTYKLPGKIAKMLYPHQCEGLRWLWS-----LHCKG-KGG 410
Query: 212 ILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQ 271
IL DDMGLGKT+Q + L L F K ++K+ ++V P +L+++W E+
Sbjct: 411 ILGDDMGLGKTMQICSFLAGL----FHSK-LIKRVLVVAPKTLLTHWIKEL--------S 457
Query: 272 LIALCESTRDDVVSGIDSFTDPCSSL----QVLIVSYETFRMHSSK------FSCSES-- 319
++ L TR+ + + + + +L+ +Y+ R +S F ES
Sbjct: 458 VVGLSGKTREYFGTSLKARDYELQYILQDKGILLTTYDIVRNNSKSLRGDHYFLDEESED 517
Query: 320 ---CDLLICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGI 357
D +I DE H +KN T + N+L+E +A+ NF P +
Sbjct: 518 SYIWDYMILDEGHLIKNPSTQRAKSLIEIPSAHCIVISGTPIQNNLKELWALFNFCCPDL 577
Query: 358 LGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR----------- 406
LGD +F++ YE I+ G E A++ EK++G + EL ++ + LRR
Sbjct: 578 LGDNKWFKQTYEHPILRGNEKNASDREKRIGSTVAMELRERIQPYFLRRMKNEVFKEDDA 637
Query: 407 TNALLS--NHLPPKIIEVVCCKLTPL--QSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
T A LS N + + C +L PL Q +LY F+ S+ V A LA +T
Sbjct: 638 TTAKLSRKNEIIVWLRLTTCQQLRPLLCQRQLYEAFLRSEIVLSAFD-----GSPLAALT 692
Query: 463 ALKKLCNHPKLI----YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS 518
LKK+C+HP L+ + + G ED M T +S
Sbjct: 693 ILKKICDHPLLLTKRAAEDLLEGMESMLNPEDVAVAEKLAMHVADVAERTDFQEKHDSIS 752
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
K+ + LL +L + +++ S + L+L + Y +LR+DGTT ++ R K+
Sbjct: 753 CKISFVLSLLDNLIPEGHN-VLIFSQTRKMLNLIEESLVSNGYEFLRIDGTTKVTDRAKI 811
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
V+ F + +FLL+S+ GG GL L +R+++ DP WNP+ D Q+ R +R GQKK
Sbjct: 812 VDDFQE-GNGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKD 870
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
V +YR ++ GT+EEK+Y++Q+ K GL + + + Q + S +DLR+LF+
Sbjct: 871 VVVYRLMTCGTVEEKIYRKQIFKGGLFRTATENK-----EQIRYFSQQDLRELFSL 921
>gi|154344042|ref|XP_001567965.1| putative DNA-dependent ATPase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065299|emb|CAM40727.1| putative DNA-dependent ATPase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1103
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 287/599 (47%), Gaps = 80/599 (13%)
Query: 163 EPQNDGGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E + G +++ +T P +R LRP+Q EGV ++ GL + G++G ILAD+MGLGK
Sbjct: 144 EEDSTGFDMMHLTDTPSYIRGKLRPYQIEGVNWLL----GLF-SRGVNG-ILADEMGLGK 197
Query: 222 TLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCEST 279
T Q+IA + Y G G +V V P S++ NW E K W G V +
Sbjct: 198 TFQTIATIAYLKFTVGMPGPHLV-----VCPKSVMGNWYREFKHWCPGLSVYKFHVSSDL 252
Query: 280 RDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN 339
R ++ TD V++ ++E + F + LI DEAH+LKN++ +
Sbjct: 253 RPSIIKAHLHPTDRIK-YDVIVTTFEMVLDELNLFK-RIAWQYLIVDEAHKLKNEEGRAH 310
Query: 340 -------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 380
+N+L+E +A+++F P + D+ F +++T+ G++ T
Sbjct: 311 TALDSLQTSHRLIITGTPLQNNLKELWALLHFLAPRLFNDSESFDAWFDTT--SGQQDTN 368
Query: 381 TEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIH 440
S L + ++RR A +S +P K V C+L+ Q E Y + +
Sbjct: 369 V----------MSNLHKILAPLMIRRLKADVSTGIPAKKEIYVSCQLSKKQREWYMNVL- 417
Query: 441 SKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMF 500
+K+ + + + + L+K+ NHP L+ + G G PP +
Sbjct: 418 AKDAEVLNKAGGSVASLTNVMMGLRKVINHPYLM----EGGEEG-----------PPFV- 461
Query: 501 SGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQ--RTDDRIVLVSNYTQTLDLFAQLCRE 558
D V SGKM +L +LL LR + ++++ S +T L++ C
Sbjct: 462 ---------TDEKLVRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNM 512
Query: 559 RRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDW 618
R + Y R+DG TS +R + FN P+ + F+FLLS++AGG G+NL N ++L+D DW
Sbjct: 513 RGFMYCRIDGNTSGYERDSQMASFNSPTSDYFIFLLSTRAGGLGINLQAANHVILYDSDW 572
Query: 619 NPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSA 677
NP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L V+QQ + S A
Sbjct: 573 NPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGRLQSKA 632
Query: 678 TQGNFLSTEDLRDLFTF-HDDVRSEIHENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
T N S E+L + F +++ HE++ D E+I TN A + Q
Sbjct: 633 T--NQASKEELLSMIKFGAEEIFKTRHEDITEADIDRLLDDGETIS-NQLTNEAKQQVQ 688
>gi|395542615|ref|XP_003773222.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sarcophilus
harrisii]
Length = 1041
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 169 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 222
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW E K+WV G + Q A RD ++ G
Sbjct: 223 V-----LVPKSTLHNWMNEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 267
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 268 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 324
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E +A++NF P + A F +++T+ G ++KL +ER
Sbjct: 325 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 372
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 373 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 432
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 433 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 467
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ D R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 468 VTNSGKMVVLDKLLPKLKEQ-DSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 526
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ ++FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 527 RQDSINAYNEPNSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 586
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 587 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 623
>gi|403225017|ref|NP_001258119.1| probable global transcription activator SNF2L1 [Rattus norvegicus]
Length = 1062
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 267/572 (46%), Gaps = 80/572 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L G++G ILAD+MGLGKTLQ+IALL Y + F G M
Sbjct: 187 LRDYQIRGLNWLIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNFPGPHM 240
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L +C DV + V +
Sbjct: 241 V-----LVPKSTLHNWMNEFKRWVPS---LRVICFVGDKDVRAAFIRDEMMPGEWDVCVT 292
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---------NDL 343
SYE S F L+ DEAHR+KN+++ TNR N+L
Sbjct: 293 SYEMVIKEKSVFK-KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNL 351
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 352 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 399
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR + LPPK + L+ +Q E Y + S + + ++L +
Sbjct: 400 LRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQ 459
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 460 LRKCCNHPYL-FDGAEPGPPYTT------------------------DEHIVSNSGKMVA 494
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL ++++ R+++ S T+ LD+ C R Y Y RLDG T +R++ + FN
Sbjct: 495 LDKLLARIKEQ-GSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 553
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 554 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 613
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
++ T+EE++ +R K L ++ Q Q Q N L+ E++ + +R
Sbjct: 614 LITDNTVEERIVERAEIKLRLDSIVIQ-QGRLIDQQSNKLAKEEMLQM------IRHGAT 666
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
C + D+ +I E E +A N++
Sbjct: 667 HVFACKESELTDEDIVTILERGEKKTAEMNER 698
>gi|345324924|ref|XP_001513276.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5
[Ornithorhynchus anatinus]
Length = 1051
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 179 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 232
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW E K+WV G + Q A RD ++ G
Sbjct: 233 V-----LVPKSTLHNWMNEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 277
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 278 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 334
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E +A++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 382
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 383 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 442
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 443 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 477
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ D R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 478 VTNSGKMVVLDKLLPKLKEQ-DSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 536
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ ++FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 537 RQDSINAYNEPNSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 596
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 633
>gi|242002592|ref|XP_002435939.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
gi|215499275|gb|EEC08769.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
Length = 982
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 265/553 (47%), Gaps = 81/553 (14%)
Query: 187 HQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTL-------LCQGFDG 239
+Q+ GV++++E N GI G D+MGLGKT+Q+IA L L F G
Sbjct: 2 YQQTGVRWLWELHRQ--NTGGIVG----DEMGLGKTIQTIAFFAGLHHSNLRTLGDSFQG 55
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCES-----TRDDVVSGIDSFTDPC 294
+ +++ PT+++ W E +W V++ L +S +++ +V ++
Sbjct: 56 ---LGPVVLICPTTVMHQWVREFHRWYPP-VRVAILHDSGSFAGSKETLVRQVNR----- 106
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN--------------- 339
VL+ SY S E ++ DE H+++N T
Sbjct: 107 -DRGVLVTSYAGVSKLSPMLLRHE-WHYVVLDEGHKIRNPDAQTTLACKQFRTTHRIILS 164
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+N+L E +++ +F PG LG F + + I G AT+ + + +S L
Sbjct: 165 GSPIQNNLRELWSLFDFVFPGKLGTLPVFMQEFAVPITQGGYSNATDVQ--TAYKCASVL 222
Query: 396 SAKVNQFILRRT--NALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
+ ++LRR + + LP K +V+ C+LT Q +LY ++ + + +
Sbjct: 223 RDTIKPYLLRRMKDDVQCNLQLPKKNEQVLFCRLTDHQRDLYRQYLDTPEIASIL---VG 279
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDC-IRFFPPEMFSGRSGSWTGGDG 512
+ ++ + L+K+CNHP L G P F+D + P EM G G
Sbjct: 280 RLQVFVGLINLRKICNHPDLF-----DGGPKV--FKDTDLSTLPAEMRYGFPGR------ 326
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
SGKM V+ LL L +R R++L + Q L + + +++ Y Y+ + G+T I
Sbjct: 327 -----SGKMAVVESLL-KLWKRQGHRVLLFTQSRQMLLILEKFVQDQGYKYMVMTGSTPI 380
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
+ RQ +N FN + + FVFLL+++ GG G+NL G +R+V++DPDWNP+ D QA R WR
Sbjct: 381 ASRQPAINKFNADT-SVFVFLLTTRVGGLGVNLTGADRVVIYDPDWNPSTDTQARERAWR 439
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLF 692
GQ + V IYR L+ GTIEEK+Y RQ+ K+ L + ++ Q F T DL +LF
Sbjct: 440 IGQLRDVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD-----PKQRRFFKTNDLHELF 494
Query: 693 TFHDDVRSEIHEN 705
DD + + E
Sbjct: 495 CLADDAKQKRTET 507
>gi|342885837|gb|EGU85789.1| hypothetical protein FOXB_03637 [Fusarium oxysporum Fo5176]
Length = 1979
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 255/527 (48%), Gaps = 61/527 (11%)
Query: 182 RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKP 241
R ++ HQ +GV+F++ + + + + GC+LA MGLGKT+Q I +L L P
Sbjct: 1034 RRIKDHQIDGVRFIWNQI--VRDPSVRQGCLLAHTMGLGKTMQVITVLVALAEAAQSKDP 1091
Query: 242 MV----------KKAIIVTPTSLVSNWEAEIKKWVGGRV--QLIALCEST----RDDVVS 285
V + +++ P +LV NW E+ KW + +L + +T R VVS
Sbjct: 1092 SVVAQIPEDLREPRILVLCPAALVDNWIDELLKWAPADLLGELRKVSSNTPVEERAAVVS 1151
Query: 286 GIDSFTDPCSSLQVLIVSYETFR--MHSSKFSC---SESCDLLICDEAHRLKNDQTLTN- 339
S VL + YE F+ M+ S+ + D++I DEAH++KN ++ TN
Sbjct: 1152 SW------ASGRGVLTLGYEMFKKIMNLSEELADLLTNRPDVVIADEAHKMKNRESQTNL 1205
Query: 340 ------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTAT 381
N + E+FAM+++ P LG + F Y + + G +T
Sbjct: 1206 ASSRFRTKSRIALTGSPLSNSVLEYFAMIDWVAPNFLGPFSEFSHIYASPVERGLYNDST 1265
Query: 382 EEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS 441
EK+ R L V I R T A L + LPPK ++ T Q +LY +I
Sbjct: 1266 PAEKRRAQMRLKALEQLVAPKINRHTIAALKSDLPPKQEFIIFVPPTTPQKQLYQLYI-- 1323
Query: 442 KNVKRAISEE--TKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI-RFFPPE 498
R ++ E Q++ A I L +C+HP+ +K+ G D + FP
Sbjct: 1324 ----RGVAREGTDSQAETFAAINHLGLICSHPRCFEAKVKAIQKGIRSNSDNEDKSFPKS 1379
Query: 499 MFSGRSGSW-TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCR 557
M + + D LS K +L +L RQ D++++ S TLD +CR
Sbjct: 1380 MIPEFLETLHSFRDLETPTLSLKTELLTIILDEARQ-VKDKVLIFSQSLHTLDYIENMCR 1438
Query: 558 ERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 617
+R RLDG+T + RQ+ FN+ SK VFL+S+ AGG GLN+ G NR+V+FD
Sbjct: 1439 MQRRTVSRLDGSTPVPSRQRQTKDFNEGSKE--VFLISTTAGGVGLNIQGANRVVIFDVR 1496
Query: 618 WNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL 664
+NP++++QA R +R GQ+K VF+YRF+ GT E+ ++ RQ+ K L
Sbjct: 1497 YNPSDEQQAVGRAYRIGQQKPVFVYRFMVAGTFEDNLHNRQVFKMQL 1543
>gi|357480785|ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355512013|gb|AES93636.1| Chromatin remodeling complex subunit [Medicago truncatula]
Length = 1063
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 240/517 (46%), Gaps = 70/517 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LRP+Q EG+Q+M + LN ILAD+MGLGKT+Q+I+L+ L+ + K +
Sbjct: 363 LRPYQIEGLQWMLSLFNNNLNG------ILADEMGLGKTIQTISLIAHLM----EYKGVT 412
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+IV P +++ NW E W + A+ R D I VL+
Sbjct: 413 GPFLIVAPKAVLPNWVNEFATWAPS---ITAVLYDGRMDERKAIKEEISGEGKFNVLLTH 469
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-----TLTN---------------RNDL 343
Y+ M F LI DE HRLKN + TL N +N L
Sbjct: 470 YDLI-MRDKAFLKKIHWKYLIVDEGHRLKNHECALARTLDNSYHIERRLLLTGTPIQNSL 528
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
+E ++++NF P I F ++ + + T+EE+ L I R L + FI
Sbjct: 529 QELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPFI 585
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR A + LP K ++ C ++ Q Y V + + +SK L +T
Sbjct: 586 LRRKKAEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRV--GLDYGSGKSKSLQNLTM 643
Query: 464 -LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L GN E+ +R SGK
Sbjct: 644 QLRKCCNHPYLFV-----GNYDIYRREEIVR-----------------------ASGKFE 675
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
+L RLL LR R R++L S T+ +D+ + Y +LRLDG+T +R L+ F
Sbjct: 676 LLDRLLPKLR-RAGHRVLLFSQMTRLMDILEVYLQLHDYKFLRLDGSTKTEERGSLLKKF 734
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N P F+FLLS++AGG GLNL + +++FD DWNP D+QA R R GQKK V ++
Sbjct: 735 NAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVF 794
Query: 643 RFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSAT 678
+S G+IEE + +R K G+ KVIQ ++++T
Sbjct: 795 VLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTST 831
>gi|344301436|gb|EGW31748.1| hypothetical protein SPAPADRAFT_51729 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1050
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 261/539 (48%), Gaps = 72/539 (13%)
Query: 158 LWQPEEPQNDGGNLVPI-TVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILA 214
L Q EE Q+D I T P V+ LR +Q +G+ ++ L+ ILA
Sbjct: 110 LLQDEEHQDDEDQQHTILTESPSYVQGGKLREYQIQGLNWLISLYENRLSG------ILA 163
Query: 215 DDMGLGKTLQSIALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLI 273
D+MGLGKTLQ+I+ L Y + DG P I++ P S + NW E KW V ++
Sbjct: 164 DEMGLGKTLQTISFLGYLRYIKHIDG-PF----IVIVPKSTLDNWRREFAKWTPD-VNVV 217
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKN 333
L + ++ I C VLI SYE S+ + + ++ DEAHR+KN
Sbjct: 218 VL-QGNKEVRTEIIQDRLLACD-FDVLITSYEMVIREKSQLKKFK-WEYIVVDEAHRIKN 274
Query: 334 DQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIIC 374
+++ ++ N+L E +A++NF P + GD+ F Y++
Sbjct: 275 EESSLSQIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEQFDDYFDQQ--- 331
Query: 375 GREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSEL 434
++ E+E+K + +L ++ F+LRR + + L PKI V ++ +Q +
Sbjct: 332 -KDLDQDEKERKQD-QAVQDLHQLLSPFLLRRVKSDVETSLLPKIETNVYIGMSEMQVDW 389
Query: 435 YNHFIHSK--NVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCI 492
Y + V + + ++++L + L+K CNHP L +D + G P TT
Sbjct: 390 YRKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT------ 442
Query: 493 RFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLF 552
D V SGKM +L ++L Q R+++ S ++ LD+
Sbjct: 443 ------------------DEHLVNNSGKMIILDKMLKKF-QAEGSRVLIFSQMSRLLDIL 483
Query: 553 AQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLV 612
C R Y Y R+DG+TS R ++++N P +F+FLL+++AGG G+NL + ++
Sbjct: 484 EDYCIFREYQYCRIDGSTSHEDRIDAIDNYNMPDSEKFIFLLTTRAGGLGINLTSADIVI 543
Query: 613 LFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ 670
L+D DWNP D QA R R GQKK+V +YRF++ IEEKV +R K L Q VIQQ
Sbjct: 544 LYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVIQQ 602
>gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]
Length = 1518
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/570 (29%), Positives = 274/570 (48%), Gaps = 94/570 (16%)
Query: 184 LRPHQREGVQFM-FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM 242
L P Q EGV ++ + G+ ILAD+MGLGKT+Q++ LY+L +G P
Sbjct: 270 LHPFQIEGVSWLRYSWGQGI-------PTILADEMGLGKTIQTVVFLYSLFKEGHCRGPF 322
Query: 243 VKKAIIVTPTSLVSNWEAEIKKW---------VGGRVQ--LIALCESTRDDVVSGIDSFT 291
+I P S ++NWE E++ W VGG+ +I E + ++V +
Sbjct: 323 ----LISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMREN 378
Query: 292 DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT--------------- 336
V++ SYE + ++ C + L++ DEAHRL+++Q+
Sbjct: 379 QTQYKFNVMLTSYEFISVDAAFLGCIDWAALVV-DEAHRLRSNQSKFFRILSKYRIGYKL 437
Query: 337 -LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
LT +N+LEE F ++NF + G D F+ + T+ K+ ++R
Sbjct: 438 LLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEF------------TDVSKEEQVKRL 485
Query: 393 SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET 452
E+ + +LRR A + +PPK +V +L+ +Q + Y H + +KN K A++++
Sbjct: 486 HEI---LEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHIL-TKNFK-ALNQKG 540
Query: 453 --KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ +L + L+K CNHP L + +G +
Sbjct: 541 GGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEM------------------- 581
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
+ + SGK+ +L+++L L+ + R++L S T+ L++ Y Y R+DG+
Sbjct: 582 -SSLTKASGKLDLLSKMLKQLKA-DNHRVLLFSQMTKMLNILEHFLEGEGYQYDRIDGSI 639
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
RQK ++ FNDP FVFLLS++AGG G+NL + +++FD DWNP ND QA +R
Sbjct: 640 KGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRA 699
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
R GQKK+V IYRF++ ++EE++ Q K L ++ + T NF S ++L D
Sbjct: 700 HRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTT--NF-SKDELED 756
Query: 691 LFTF--HDDVRSEIHENMHCTRCQNYDDGA 718
+ F D + E +H YDD A
Sbjct: 757 ILRFGTEDLFKDGKSEAIH------YDDKA 780
>gi|171694309|ref|XP_001912079.1| hypothetical protein [Podospora anserina S mat+]
gi|170947103|emb|CAP73908.1| unnamed protein product [Podospora anserina S mat+]
Length = 1203
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/546 (30%), Positives = 258/546 (47%), Gaps = 85/546 (15%)
Query: 180 LVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQG--- 236
+ ++LR +Q EGV+F+ + GCIL DDMGLGKT+Q A L +
Sbjct: 357 IAQYLRDYQVEGVRFLHQ------RFIYQKGCILGDDMGLGKTVQVAAFLTAAFGKTGDE 410
Query: 237 FDGKPMVK----------KAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
D K M K + +IV P SL+ NW+ E+ +W + L ++DV+
Sbjct: 411 RDAKRMRKMRRAGGCWYPRVLIVCPGSLIQNWKNELNRWGWWHIDLFH--GVGKEDVLGA 468
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------ 340
+ L+V+I +Y T++ + + + D ++ DE H+LK+ ++ T R
Sbjct: 469 AKA-----GRLEVMITTYMTYKNNCDAVNAID-WDCVVADECHQLKDRRSETTRAMGRVN 522
Query: 341 -------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
N EE + ++N+TNPG G A + + G+ AT K+L
Sbjct: 523 AMCRIGLTGTAIQNKYEELWTLLNWTNPGRFGTLAEWTTTITKPLTVGQSHEATL--KQL 580
Query: 388 GIERSSELSAKVN---QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNV 444
+ R++ N + LRR L+++ LP K +VV C LT +QS Y +FI V
Sbjct: 581 SLARTTAKKLVHNLLPDYFLRRIKTLIADQLPKKSDKVVFCPLTDIQSHAYQNFIDGDQV 640
Query: 445 KRAIS---------------------EETKQSKILAY--ITALKKLCNHPKLIYDTIKSG 481
+ I E+ + K L + +T L+K+ NH L+ +
Sbjct: 641 QYIICASEPCPCASGRKQGWCCYKILEDGRPWKSLTFPCLTTLQKIANHLTLLLPSSADP 700
Query: 482 NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG----AWVELSGKMHVLARLLGHLRQRTDD 537
N + +R P+ G W D A E GK VL +LL D
Sbjct: 701 NDKQSTELSTLRTCIPD---GWEKLWQERDSMLSLANPEFCGKWKVLKKLL-QFWHSNGD 756
Query: 538 RIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSS 596
++++ S+ + L + L Y LDG+ S +RQ +V+ FN DP+ +FVFL+S+
Sbjct: 757 KVLVFSHSVRLLRILRHLFNNTNYNVSFLDGSLSYEERQNVVDEFNTDPA--QFVFLIST 814
Query: 597 KAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQ 656
KAGG GLN+ N++V+FDP WNPA D QA R +R GQ + V ++R +S GTIEE VY
Sbjct: 815 KAGGVGLNITSANKVVIFDPHWNPAYDLQAQDRAYRIGQIRDVDVFRLISAGTIEEIVYA 874
Query: 657 RQMSKE 662
RQ+ K+
Sbjct: 875 RQIYKQ 880
>gi|71400983|ref|XP_803224.1| transcription activator [Trypanosoma cruzi strain CL Brener]
gi|70865998|gb|EAN81778.1| transcription activator, putative [Trypanosoma cruzi]
Length = 1038
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 264/563 (46%), Gaps = 99/563 (17%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G +++ +T P +R LRP+Q EGV ++ S +N ILAD+MGLGKTLQ+I
Sbjct: 151 GFDVLHLTETPSYIRGKLRPYQIEGVNWLLGLFSCNING------ILADEMGLGKTLQTI 204
Query: 227 ALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG------------RVQLI 273
A L Y G G +V V P S++ NW E+K+W R QLI
Sbjct: 205 ATLAYLKFTYGLPGPHLV-----VCPKSVMGNWYRELKQWCPALNAFKFHGNSEIRPQLI 259
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF-RMHSSKFSCSESCDLLICDEAHRLK 332
D + I ++ +++I TF R+H L+ DEAH+LK
Sbjct: 260 KSHLQPHDKLKYDI-----IVTTFEMVIEELPTFKRIH---------WQYLVVDEAHKLK 305
Query: 333 NDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N++ + +N+L+E +A+++F P + +A F +++T+
Sbjct: 306 NEEGRVHTALDSLNTNHRLIITGTPLQNNLKELWALLHFLAPRLFENAESFEAWFDTA-- 363
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
G++ + S + + ++RR + +S +PPK V CKLT Q +
Sbjct: 364 SGQQDSNA----------MSNMHKILAPLMIRRIKSEVSTGIPPKKEIYVACKLTKTQRK 413
Query: 434 LYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR 493
Y H + + S + + L+K+ NHP ++ D + G P T
Sbjct: 414 WYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMM-DGGEEGPPFIT------- 465
Query: 494 FFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR--IVLVSNYTQTLDL 551
D V+ SGKM +L +LL LR+ +++ +++ S +T LD+
Sbjct: 466 -----------------DERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDI 508
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
C R + R+DG TS R + FN P+ + F+FLLS++AGG G+NL N +
Sbjct: 509 LEDYCGMRGFRVCRIDGNTSGYDRDAQMAAFNSPNSDYFIFLLSTRAGGLGINLQAANHV 568
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
V++D DWNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L ++ Q
Sbjct: 569 VIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQ- 627
Query: 672 QTDSSATQGNFLSTEDLRDLFTF 694
GN +S E+L + F
Sbjct: 628 HGRMQGRGGNNVSKEELLSMIKF 650
>gi|357608812|gb|EHJ66159.1| putative DNA excision repair protein ERCC-6 [Danaus plexippus]
Length = 734
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 249/508 (49%), Gaps = 62/508 (12%)
Query: 217 MGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQL-IAL 275
MGLGKT+Q IA L L + II++P +++ W + W Q+ +A+
Sbjct: 1 MGLGKTVQVIAFLAGLSMTDSGSWGGLGPCIILSPATVIYQWVSHFHYWFP---QIRVAV 57
Query: 276 CESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ 335
+ S D SS +L+V+Y + S +I DE H+++N
Sbjct: 58 LHHSGSHAGSHHKLIRDMHSSHGILLVTYAGIVKYIKDL-LSRKWHYIILDEGHKIRNPD 116
Query: 336 TLTNR-------------------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGR 376
T ++ N L+E +++ +F PG+LG F ++ I G
Sbjct: 117 TQVSKMVKRFETSHKLLITGSPMQNSLQELWSLFDFMRPGLLGSHTAFMEHFAVPITQGG 176
Query: 377 EPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH--LPPKIIEVVCCKLTPLQSEL 434
A+E ++ +E + L + ++LRRT + +H LP K +V+ C LT Q +L
Sbjct: 177 YANASEFQEATALEIAKALKNLITPYMLRRTKTEVQDHIQLPEKNEQVLFCSLTQEQKDL 236
Query: 435 YNHFIHSKNVKRAISEETK-----QSKILAYITALKKLCNHPKL-IYDTIKSGNPGTTGF 488
Y ++ S ++ + +++K +++IL ++ L+K+CNHP + +Y+ +
Sbjct: 237 YMGYLMSSTIRSILDKDSKHGEPMRARILVALSTLRKICNHPDIYLYE----------AY 286
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQT 548
E+ ++ G+W + SGKM V+ LL + + R ++ +
Sbjct: 287 EET-----DDIDEKSFGNW--------KRSGKMSVVHSLLK-IWLKQGHRALIFTQSRAM 332
Query: 549 LDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGG 608
L + Q + + YLR+DG+ ++ RQ L+ +N+ + VFL +++ GG G+NL G
Sbjct: 333 LCILEQHLQNHSFKYLRMDGSVNVGVRQNLIKTYNE-NPEYLVFLATTRVGGLGVNLTGA 391
Query: 609 NRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
+R++++DPDWNPA D QA R WR GQ++ V +YR LS GTIEEK+YQRQ+ K L I
Sbjct: 392 DRVIIYDPDWNPATDNQAKERAWRIGQERNVTVYRLLSAGTIEEKIYQRQIFKNFLSNKI 451
Query: 669 QQEQTDSSATQGNFLSTEDLRDLFTFHD 696
+ Q N L+T +L+ LF+ +
Sbjct: 452 LID-----PNQKNVLTTSNLQSLFSLEN 474
>gi|407862998|gb|EKG07817.1| transcription activator, putative [Trypanosoma cruzi]
Length = 1113
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 262/553 (47%), Gaps = 79/553 (14%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G +++ +T P +R LRP+Q EGV ++ S +N ILAD+MGLGKTLQ+I
Sbjct: 151 GFDVLHLTETPSYIRGKLRPYQIEGVNWLLGLFSRNING------ILADEMGLGKTLQTI 204
Query: 227 ALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL-CESTRDDVV 284
A L Y G G +V V P S++ NW E+K+W L A T +
Sbjct: 205 ATLAYLKFTYGLPGPHLV-----VCPKSVMGNWYRELKQWCPA---LNAFKFHGTSEIRP 256
Query: 285 SGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESC--DLLICDEAHRLKNDQTLTN--- 339
I S P L+ I+ TF M + + L+ DEAH+LKN++ +
Sbjct: 257 QLIKSHLQPHDKLKYDII-VTTFEMVIEELPTFKRIHWQYLVVDEAHKLKNEEGRVHTAL 315
Query: 340 ----------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEE 383
+N+L+E +A+++F P + +A F +++T+ G++ +
Sbjct: 316 DSLNTNHRLIITGTPLQNNLKELWALLHFLAPRLFENAESFEAWFDTA--SGQQDSNA-- 371
Query: 384 EKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKN 443
S + + ++RR + +S +PPK V CKLT Q + Y H +
Sbjct: 372 --------MSNMHKILAPLMIRRIKSEVSTGIPPKKEIYVACKLTKTQRKWYMHVLAKDA 423
Query: 444 VKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGR 503
+ S + + L+K+ NHP ++ D + G P T
Sbjct: 424 EALNKASGGSMSSLTNIMMNLRKVINHPYMM-DGGEEGPPFIT----------------- 465
Query: 504 SGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR--IVLVSNYTQTLDLFAQLCRERRY 561
D V+ SGKM +L +LL LR+ +++ +++ S +T LD+ C R +
Sbjct: 466 -------DERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDILEDYCGMRGF 518
Query: 562 PYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPA 621
R+DG TS R + FN P+ + F+FLLS++AGG G+NL N +V++D DWNP
Sbjct: 519 RVCRIDGNTSGYDRDAQMAAFNSPNSDYFIFLLSTRAGGLGINLQAANHVVIYDSDWNPQ 578
Query: 622 NDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN 681
D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L ++ Q GN
Sbjct: 579 MDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQ-HGRMQGRGGN 637
Query: 682 FLSTEDLRDLFTF 694
+S E+L + F
Sbjct: 638 NVSKEELLSMIKF 650
>gi|340052319|emb|CCC46595.1| putative transcription activator [Trypanosoma vivax Y486]
Length = 1129
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/568 (29%), Positives = 267/568 (47%), Gaps = 109/568 (19%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G ++ +T P +R LRP+Q EGV ++ S +N ILAD+MGLGKTLQ+I
Sbjct: 159 GSEMLHLTESPTYIRGKLRPYQIEGVNWLLGLFSRCING------ILADEMGLGKTLQTI 212
Query: 227 ALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG------------RVQLI 273
+ L Y G G +V V P S++ NW EI+ W R QLI
Sbjct: 213 STLAYLKFSHGLPGPHLV-----VCPKSVMGNWYREIRHWCPALRAYKFHGSNDVRRQLI 267
Query: 274 ALC-----ESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEA 328
+ D VV+ + + C+SL+ + Y LI DEA
Sbjct: 268 KAHLNPHEKIKYDIVVTTFEMVIEECTSLKNIPWQY------------------LIVDEA 309
Query: 329 HRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYE 369
H+LKN+++ ++ +N+L+E +A+++F P + ++ F+ +++
Sbjct: 310 HKLKNEESRSHTVLHSIPSNYRLIITGTPLQNNLKELWALLHFLAPRLFDNSESFQAWFD 369
Query: 370 TSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTP 429
T+ + ++ L + + + ++RR A +S +PPK V CKLT
Sbjct: 370 TA-------SGQQDSDAL-----NNMHKVLVPLMIRRMKADVSTGIPPKKEIYVSCKLTK 417
Query: 430 LQSELYNHFIHSKNVKRAISEETKQSKILAYITA-LKKLCNHPKLIYDTIKSGNPGTTGF 488
Q Y H + +K+ + Q +L+ + L+K+ NHP ++ D + G P T
Sbjct: 418 TQRRWYMHVL-AKDAEALNKGSRGQMSVLSNVLMNLRKVINHPYMM-DGGEDGPPFIT-- 473
Query: 489 EDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHL--RQRTDDRIVLVSNYT 546
D V+ SGKM +L +LL L ++ ++++ S +T
Sbjct: 474 ----------------------DERIVKYSGKMLILDKLLNRLFRDEKEKHKVLIFSQFT 511
Query: 547 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 606
LD+ C R Y R+DG TS R + FN P+ + F+FLLS++AGG G+NL
Sbjct: 512 SMLDILDDYCAMRGYHTCRIDGNTSGYDRDSQMALFNSPNGDCFIFLLSTRAGGLGINLQ 571
Query: 607 GGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK 666
N ++++D DWNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L
Sbjct: 572 AANHVIIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFVTDGTVEEKIYRRALKKLYLDA 631
Query: 667 VIQQEQTDSSATQGNFLSTEDLRDLFTF 694
++ Q Q GN S E+L + F
Sbjct: 632 MVVQ-QGRVCGKSGNNASKEELLSMIKF 658
>gi|149060085|gb|EDM10901.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 (predicted) [Rattus
norvegicus]
Length = 985
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 267/572 (46%), Gaps = 80/572 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L G++G ILAD+MGLGKTLQ+IALL Y + F G M
Sbjct: 110 LRDYQIRGLNWLIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNFPGPHM 163
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L +C DV + V +
Sbjct: 164 V-----LVPKSTLHNWMNEFKRWVPS---LRVICFVGDKDVRAAFIRDEMMPGEWDVCVT 215
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---------NDL 343
SYE S F L+ DEAHR+KN+++ TNR N+L
Sbjct: 216 SYEMVIKEKSVFK-KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNL 274
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 275 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 322
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR + LPPK + L+ +Q E Y + S + + ++L +
Sbjct: 323 LRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQ 382
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 383 LRKCCNHPYL-FDGAEPGPPYTT------------------------DEHIVSNSGKMVA 417
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL ++++ R+++ S T+ LD+ C R Y Y RLDG T +R++ + FN
Sbjct: 418 LDKLLARIKEQ-GSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 476
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 477 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 536
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
++ T+EE++ +R K L ++ Q Q Q N L+ E++ + +R
Sbjct: 537 LITDNTVEERIVERAEIKLRLDSIVIQ-QGRLIDQQSNKLAKEEMLQM------IRHGAT 589
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
C + D+ +I E E +A N++
Sbjct: 590 HVFACKESELTDEDIVTILERGEKKTAEMNER 621
>gi|449017735|dbj|BAM81137.1| homeotic gene regulator BRAHMA [Cyanidioschyzon merolae strain 10D]
Length = 1457
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 245/521 (47%), Gaps = 74/521 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
L+P+Q EG+Q+M + LN ILAD+MGLGKT+Q+IALL Y + +G G +
Sbjct: 571 LKPYQIEGLQWMVSLYNNNLNG------ILADEMGLGKTIQTIALLAYLMEYKGVQGPHL 624
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
IV P S +SNW E + W ++ + + + I + VL+
Sbjct: 625 -----IVVPLSTLSNWVREFRAWAPHMKMVVYRGDKSARRM---IQQYEMASGQYNVLLT 676
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-----TL------TNR---------ND 342
+YE + + + +I DE HR+KN TL NR N+
Sbjct: 677 TYE-YCVRDQRALSRIFWKYIIVDEGHRMKNTHCRLAMTLGVKYRSRNRLLLTGTPLQNN 735
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYET---SIICGREPTATEEEKKLGIERSSELSAKV 399
L E +A++NF P I F ++ S+ G +P EEE L I R L +
Sbjct: 736 LTELWALLNFLLPNIFNSVDTFESWFSAPFQSLGTGDQPELAEEEVLLIINR---LHHVL 792
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA 459
F+LRR + + LP K V+ C L+ Q LY N+ ++ K
Sbjct: 793 RPFLLRRLKTDVEDQLPEKREHVLRCDLSIWQKILYRQ--AKSNIGVVLNAGGKPRLFNN 850
Query: 460 YITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW-VELS 518
+ LKK+CNHP L YD +E+ + D W V S
Sbjct: 851 VVMQLKKVCNHPYLFYD-----------WEEV----------------SALDPLWIVRTS 883
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GK +L R+L LRQ + R++L S T LD+ C+ R + YLRLDG+T +R ++
Sbjct: 884 GKFELLDRMLPKLRQ-SGHRVLLFSQMTILLDVLEDFCKLRNFSYLRLDGSTKAEERHEM 942
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
+ FN P + F+F+LS++AGG GLNL + ++LFD DWNP D QA R R GQ+
Sbjct: 943 LELFNAPDNDIFLFMLSTRAGGLGLNLQTADTVILFDSDWNPQADLQAQDRAHRIGQRNE 1002
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSAT 678
V ++R + T+EE++ K + ++VIQ + + AT
Sbjct: 1003 VRVFRLICADTVEERILAEANRKLNMDRQVIQAGKFNQKAT 1043
>gi|350639251|gb|EHA27605.1| hypothetical protein ASPNIDRAFT_184433 [Aspergillus niger ATCC
1015]
Length = 1179
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 184/663 (27%), Positives = 307/663 (46%), Gaps = 126/663 (19%)
Query: 167 DGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
D G +P + PLL + Q+ GVQ+++E + G I+ D+MGLGKT+Q I
Sbjct: 392 DNGYRIPGDIHPLLFDY----QKTGVQWLWELQQQQV------GGIIGDEMGLGKTIQVI 441
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW----------VGGRVQLIALC 276
+ L L K + + I+V P +++ W E +W G +
Sbjct: 442 SFLAGLHY----SKKLTRPVIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRN 497
Query: 277 ESTRDDVV--------------SGIDSFTDPCSSL----QVLIVSYETFRMHSS-----K 313
ES+R+D + SG+ + + VL+ +Y + ++S +
Sbjct: 498 ESSREDALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYASLVIPIE 557
Query: 314 FSCSESCDLLICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTN 354
+ C+ + DE H+++N T +N+L E +++ +F
Sbjct: 558 WGCA------VLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVF 611
Query: 355 PGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNH 414
P LG FR +E I G A+ + + + + L ++ ++L+R ++
Sbjct: 612 PMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAAD 671
Query: 415 LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLI 474
LP K +V+ CKLT Q + Y F+ S+ +K ++ + ++L + L+K+CNHP L
Sbjct: 672 LPKKSEQVLFCKLTKPQRQAYEAFLGSEEMKSILN---GRRQVLFGVDILRKICNHPDLQ 728
Query: 475 YDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQR 534
+ S TTG+ G G+ SGKM V+ LL L +
Sbjct: 729 NHKLMSS---TTGY---------------------GSGS---KSGKMQVVKSLL-ELWKD 760
Query: 535 TDDRIVLVSNYTQTLDLFAQLCRE-RRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVF 592
T + +L + + LD+ + + Y R+DGTT I RQ +V+ FN DPS + VF
Sbjct: 761 TGHKTLLFTQHRIMLDILEKFVNSLSGFNYRRMDGTTPIQHRQAMVDEFNNDPSLH--VF 818
Query: 593 LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 652
LL++K GG G+NL G +R++++DPDWNP+ D QA R WR GQK+ V +YR ++ GTIEE
Sbjct: 819 LLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIEE 878
Query: 653 KVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVR-----SEIHENMH 707
K+Y RQ+ K+ L I ++ Q DL DLF+ D+ + S+I ++
Sbjct: 879 KIYHRQIFKQFLTNKILRD-----PKQRQTFQLSDLHDLFSLGDEGQGPTETSKIFKDAD 933
Query: 708 CTRCQNYDDGAESIGEGDETNSANKNDQSDQ-EVTDIGGFAGLAGCLH----KLKSSEKQ 762
T Y+D + + + T ++ + S Q E DI G+A + + SE++
Sbjct: 934 VT----YEDSDGTSRKSNATIKSSASSHSAQEEKKDISKVVGVAAVEQFQGDQEQQSEQE 989
Query: 763 LGT 765
GT
Sbjct: 990 KGT 992
>gi|448513927|ref|XP_003867021.1| Isw1 protein [Candida orthopsilosis Co 90-125]
gi|380351359|emb|CCG21583.1| Isw1 protein [Candida orthopsilosis Co 90-125]
Length = 1026
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 260/538 (48%), Gaps = 80/538 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LRP+Q +G+ ++ N +GI LAD+MGLGKTLQ+I+ L Y +G +
Sbjct: 132 LRPYQIQGLNWLVSLYEN--NLSGI----LADEMGLGKTLQTISFLGYLRFMYKINGPHL 185
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E ++W+ + ++ L + +D+ I + C V++
Sbjct: 186 V-----IAPKSTLDNWYREFQRWIPD-INVLVL-QGDKDERSDLIKNRVMTCD-FDVIVA 237
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
SYE + F + + ++ DEAHR+KN+++L ++ N+L
Sbjct: 238 SYEIVIREKATFKKFD-WEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNL 296
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + D F +++ ++ T+ E+ E S+L + F+
Sbjct: 297 RELWALLNFILPDVFADNDSFDEWFQ------KDETSEEDG-----EVISQLHKVLKPFL 345
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSK--ILAYI 461
LRR A + L PK + K+T +Q LY I K++ K+SK +L +
Sbjct: 346 LRRIKADVEKSLLPKKELNIYTKMTTMQKNLYQK-ILEKDIDAVNGANKKESKTRLLNIV 404
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
L+K CNHP L +D ++ G P TT D V + KM
Sbjct: 405 MQLRKCCNHPYL-FDGVEPGPPYTT------------------------DEHLVYNAQKM 439
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L +LL + R+++ S ++ LD+ C R YPY R+DG T + R ++
Sbjct: 440 IILDKLLKKFKAEGS-RVLIFSQMSRMLDILEDYCYFREYPYCRIDGQTEHADRINAIDE 498
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
+N P +FVFLL+++AGG G+NL + ++LFD DWNP D QA R R GQ K+V +
Sbjct: 499 YNKPGSEKFVFLLTTRAGGLGINLTTADVVILFDSDWNPQADLQAMDRAHRIGQTKQVKV 558
Query: 642 YRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDS----SATQGNFLSTEDLRDLFTF 694
+RF++ IEEKV +R K L Q VIQQ + ++ G S +L D+ F
Sbjct: 559 FRFITENAIEEKVLERAAQKLRLDQLVIQQGRNNTVGLDGQQSGKAASKNELLDMIQF 616
>gi|400599277|gb|EJP66981.1| SNF2 family domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1654
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 265/554 (47%), Gaps = 60/554 (10%)
Query: 162 EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGK 221
E ND G I + P + ++ HQ EGV+F++ + + +++ GC+LA MGLGK
Sbjct: 752 ESKANDQGF---IYIHPEISSRIKEHQIEGVRFLWNHI--VRDSSERQGCLLAHTMGLGK 806
Query: 222 TLQSIALLYTLLCQGFDGKPMVK----------KAIIVTPTSLVSNWEAEIKKWVGGRVQ 271
T+Q+I L L V+ K +++ P+ LV NW+ E W +
Sbjct: 807 TMQTITFLVALRESALSDDLTVRDQIPQDLRDWKVLVLCPSGLVENWKDEFLIWAPKHLM 866
Query: 272 LIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFS---------CSESCDL 322
+ +++ + +LI+ Y F+ K + E+ +
Sbjct: 867 EAIFTVEAVHSPLQRVENAKEWAVRGGILIIGYNMFKSEFRKGNEKTVTVDRILVENARV 926
Query: 323 LICDEAHRLKNDQTLTNR-------------------NDLEEFFAMVNFTNPGILGDAAY 363
+I DEAH LKN +T + N++EE++AM+N+ P LG
Sbjct: 927 VIADEAHSLKNPKTKITQVASDLKTSTRIALTGSPLANNVEEYYAMINWVAPNFLGPLQE 986
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRT-NALLSNHLPPKIIEV 422
FR Y T I G +T EK+ I+ L + R T + L + LPPK V
Sbjct: 987 FRDMYATPIHQGLYNDSTPYEKRKAIKLLQVLKTTAAPKVHRATMKSCLKDELPPKEEFV 1046
Query: 423 VCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYD-TIKSG 481
+ T +Q +LY+ ++ + + ++ +Q+ + + L +C HP + I+
Sbjct: 1047 ISVPPTEIQRKLYDLYMQATHNS---GDKVEQATLFGVLNHLALICAHPAVYRKHVIELR 1103
Query: 482 NPGTTGFEDCIRF---FPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR 538
G G +D RF P++ + S G VELS K+ +L ++L R D+
Sbjct: 1104 RKGEMG-KDVARFPMDTIPQIMNMTSDPGLGR----VELSYKVELLNKILDQ-SSRMGDK 1157
Query: 539 IVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKA 598
+++ S TLD A+L ++ + RLDG+T ISKRQ +V FN S E V+L+S+ A
Sbjct: 1158 VLVFSQSIPTLDYLAKLFGSQKRRFCRLDGSTQISKRQDMVKSFNKGS--EEVYLISTNA 1215
Query: 599 GGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQ 658
GG GLN+ G NR+V+FD +NP +D+QA R +R GQ K VF+YRF+ G+ E+ + +
Sbjct: 1216 GGVGLNIFGANRVVIFDFKYNPVSDQQAIGRAYRIGQTKPVFVYRFVVAGSFEDDLQNKA 1275
Query: 659 MSKEGL-QKVIQQE 671
+ K L +V+ Q+
Sbjct: 1276 VFKMQLASRVVDQK 1289
>gi|71649857|ref|XP_813640.1| transcription activator [Trypanosoma cruzi strain CL Brener]
gi|70878541|gb|EAN91789.1| transcription activator, putative [Trypanosoma cruzi]
Length = 1092
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 264/563 (46%), Gaps = 99/563 (17%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G +++ +T P +R LRP+Q EGV ++ S +N ILAD+MGLGKTLQ+I
Sbjct: 130 GFDVLHLTETPSYIRGKLRPYQIEGVNWLLGLFSCNING------ILADEMGLGKTLQTI 183
Query: 227 ALL-YTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGG------------RVQLI 273
A L Y G G +V V P S++ NW E+K+W R QLI
Sbjct: 184 ATLAYLKFTYGLPGPHLV-----VCPKSVMGNWYRELKQWCPALNAFKFHGNSEIRPQLI 238
Query: 274 ALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETF-RMHSSKFSCSESCDLLICDEAHRLK 332
D + I ++ +++I TF R+H L+ DEAH+LK
Sbjct: 239 KSHLQPHDKLKYDI-----IVTTFEMVIEELPTFKRIH---------WQYLVVDEAHKLK 284
Query: 333 NDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSII 373
N++ + +N+L+E +A+++F P + +A F +++T+
Sbjct: 285 NEEGRVHTALDSLNTNHRLIITGTPLQNNLKELWALLHFLAPRLFENAESFEAWFDTA-- 342
Query: 374 CGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSE 433
G++ + S + + ++RR + +S +PPK V CKLT Q +
Sbjct: 343 SGQQDSNA----------MSNMHKILAPLMIRRIKSEVSTGIPPKKEIYVACKLTKTQRK 392
Query: 434 LYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIR 493
Y H + + S + + L+K+ NHP ++ D + G P T
Sbjct: 393 WYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMM-DGGEEGPPFIT------- 444
Query: 494 FFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDR--IVLVSNYTQTLDL 551
D V+ SGKM +L +LL LR+ +++ +++ S +T LD+
Sbjct: 445 -----------------DERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDI 487
Query: 552 FAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRL 611
C R + R+DG TS R + FN P+ + F+FLLS++AGG G+NL N +
Sbjct: 488 LEDYCGMRGFRVCRIDGNTSGYDRDAQMAAFNSPNSDYFIFLLSTRAGGLGINLQAANHV 547
Query: 612 VLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
V++D DWNP D QA R R GQK+ V +YRF++ GT+EEK+Y+R + K L ++ Q
Sbjct: 548 VIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQ- 606
Query: 672 QTDSSATQGNFLSTEDLRDLFTF 694
GN +S E+L + F
Sbjct: 607 HGRMQGRGGNNVSKEELLSMIKF 629
>gi|308799669|ref|XP_003074615.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus
tauri]
gi|116000786|emb|CAL50466.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus
tauri]
Length = 1390
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 250/515 (48%), Gaps = 81/515 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LR +Q+EGV++M N GCILAD+MGLGKT QS+AL++ L + G P
Sbjct: 306 LRSYQKEGVKWMS------FNFRAGRGCILADEMGLGKTAQSLALIHHCL-KVRPGLP-- 356
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPC----SSLQ- 298
A+IV P S V NWE E K+WV + + + D D + P SL+
Sbjct: 357 --ALIVVPLSTVVNWEREAKRWVPDAYLVTHIGKQAGRDFAREHDWYHAPVEGADGSLRS 414
Query: 299 ----VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLK-------ND-QTLTN------- 339
+++ +YET F+ + C +++ DEAHRLK ND TL+
Sbjct: 415 MKADIVLTTYETVTADRQSFAKVKWCTMVV-DEAHRLKRIGGKLGNDLGTLSVERICLLT 473
Query: 340 ----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSEL 395
+N+ E ++++NF + DA F + + K +ER L
Sbjct: 474 GTPLQNNTAELWSLLNFVDSKHFSDAEDFEAAFGGMV------------KASQVER---L 518
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS--KNVKRAISEETK 453
+ ++LRR + + LPP+ +V C+L PLQ + Y +++ +
Sbjct: 519 QQVLGPYLLRRLKSDVEQKLPPRSETLVECELAPLQKKCYRALFERNFSFLRQGCESKEN 578
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ + ++K C HP L+ G E + PE S
Sbjct: 579 FANFANIMMEVRKCCQHPFLL-----------DGVEAAV---APEGAS---------TNI 615
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGK+ +L +LL HLR+ R ++ S T+ LD+ CR R + Y+RLDG+ + S
Sbjct: 616 LVSSSGKLQLLDKLLPHLRE-GGHRALVFSQMTRVLDVLEDYCRARGHSYVRLDGSVTGS 674
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
RQ+ ++H+ + F+FLLS++AGG G+NL+ + +++FD DWNP ND QA AR R
Sbjct: 675 ARQEAIDHYCAEDSDTFLFLLSTRAGGQGINLVQADTVIMFDSDWNPQNDAQALARAHRI 734
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVI 668
GQ ++V +YR + G+ E++++ R K GL++ I
Sbjct: 735 GQTRQVQVYRLVMRGSYEKEMFTRASMKLGLEQAI 769
>gi|430811214|emb|CCJ31308.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1066
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 254/513 (49%), Gaps = 83/513 (16%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
+R +Q +G+ ++ L GI+G ILAD+MGLGKTLQ+I+ + Y +G G +
Sbjct: 155 MRDYQVQGLNWLIS-----LYENGING-ILADEMGLGKTLQTISFIGYLRFLKGIQGPHL 208
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V P S + NW E +W+ + + ++ +D+ I+ + V I
Sbjct: 209 V-----AAPKSTLDNWSREFSRWIPEIN--VFVFQAPKDERAILINERL-LTNDFDVCIT 260
Query: 303 SYETF---RMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------- 340
SYET ++H KF+ + +I DEAHR+KN++++ ++
Sbjct: 261 SYETILREKVHFKKFAW----EYIIVDEAHRIKNEESMLSKIIRLLNSRNRLLITGTPLQ 316
Query: 341 NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVN 400
N+L E +A++NF P I D+ F R++E+ G T ++ K+ +
Sbjct: 317 NNLHELWALLNFLLPDIFADSQVFDRWFESQ--NGDSDTVVKQLHKV-----------LR 363
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKIL 458
F+LRR + + L PK + L+ +Q + Y + V AI ++ ++++L
Sbjct: 364 PFLLRRVKSDVERTLKPKKEINLYVGLSEMQVKWYQKILEKDIDAVNGAIGKKEGKTRLL 423
Query: 459 AYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS 518
+ L+K CNHP L +D + G P TT D V S
Sbjct: 424 NIVMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DEHIVTNS 458
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GKM +L +LL + + D R+++ S + LD+ C R Y Y R+DG TS R
Sbjct: 459 GKMVMLDKLLKRSKAQ-DSRVLIFSQMGRVLDILEDYCYLRGYKYCRIDGQTSHEDRIIA 517
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
++ FN P ++F+FLL+++AGG G+NL + +V++D DWNP D QA R R GQ K+
Sbjct: 518 IDEFNAPGSDKFLFLLTTRAGGLGINLTTADVVVIYDSDWNPQADLQAMDRAHRIGQTKQ 577
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ 670
V++YRF++ T+EEKV +R K L Q VIQQ
Sbjct: 578 VYVYRFVTDNTVEEKVLERAAQKLRLDQLVIQQ 610
>gi|417405705|gb|JAA49556.1| Putative chromatin remodeling complex swi/snf component swi2
[Desmodus rotundus]
Length = 1052
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N FN+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQESINAFNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|238878835|gb|EEQ42473.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans
WO-1]
Length = 1017
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 259/537 (48%), Gaps = 76/537 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LRP+Q +G+ ++ L+ + G ILAD+MGLGKTLQ+I+ L Y +G +G +
Sbjct: 132 LRPYQIQGLNWLIS-----LHENNLSG-ILADEMGLGKTLQTISFLGYLRFIRGINGPHL 185
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V +TP S + NW+ E +W+ ++++ L + +D+ I + C V++
Sbjct: 186 V-----ITPKSTLDNWQREFNRWIPD-IKVLVL-QGDKDERAELIKNKVMTCD-FDVIVS 237
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
SYE + + +I DEAHR+KN+++L ++ N+L
Sbjct: 238 SYEIVIREKATLKKFD-WQYIIIDEAHRIKNEESLLSQIIRMFHSRNRLLITGTPLQNNL 296
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + + F +++ + E + S+L + F+
Sbjct: 297 RELWALLNFIVPDVFAENESFDEWFQKD---------SNNENGGEDQVVSQLHKVLKPFL 347
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILAYI 461
LRR A + L PK V K++P+Q LY + V A ++ ++++L +
Sbjct: 348 LRRIKADVEKSLLPKKELNVYVKMSPMQKNLYQKILEKDIDAVNGANGKKESKTRLLNIV 407
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
L+K CNHP L ++ ++ G P TT D V S KM
Sbjct: 408 MQLRKCCNHPYL-FEGVEPGPPYTT------------------------DEHLVYNSQKM 442
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L +LL +Q R+++ S ++ LD+ C R Y Y R+DG T S R ++
Sbjct: 443 LILDQLLKKFQQEGS-RVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHSDRINAIDE 501
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
+N P +F+FLL+++AGG G+NL + ++LFD DWNP D QA R R GQ K+V +
Sbjct: 502 YNKPGSEKFIFLLTTRAGGLGINLTSADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKV 561
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN----FLSTEDLRDLFTF 694
+RF++ IEEKV +R K L +++ Q+ ++ G S +L D+ F
Sbjct: 562 FRFITERAIEEKVLERAAQKLRLDQLVIQQGRNTGGLDGQQSSKAASKNELLDMIQF 618
>gi|341891282|gb|EGT47217.1| CBN-LET-418 protein [Caenorhabditis brenneri]
Length = 1835
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 249/546 (45%), Gaps = 84/546 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L P+Q EG+ ++ C S +A ILAD+MGLGKT+QS+ LYTL+ +G P
Sbjct: 603 LHPYQLEGINWLRHCWSNGTDA------ILADEMGLGKTVQSLTFLYTLMKEGHCKGPF- 655
Query: 244 KKAIIVTPTSLVSNWEAEIKKW---------VGGRVQLIALCESTRDDVVSGIDS----- 289
+I P S + NWE E ++W VG R + L E V + S
Sbjct: 656 ---LIAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPKAG 712
Query: 290 --FTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNRN------ 341
T VL+ SYET M + S E L+ DEAHRLKN+Q+L +N
Sbjct: 713 KMKTTENMKFHVLLTSYETINMDKTILSSIE-WGALVVDEAHRLKNNQSLFFKNLNEYTI 771
Query: 342 -------------DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+LEE F ++NF + F + +E K+
Sbjct: 772 HYRVLLTGTPLQNNLEELFHLLNFLSAERFNQLEAFTAEF------------SEISKEDQ 819
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
IE+ L + +LRR A + +P K +V +L+P+Q + Y + + +
Sbjct: 820 IEKLHNL---LGPHMLRRLKADVLTGMPSKSELIVRVELSPMQKKWYKNILTRNFDALNV 876
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
Q ++ + LKK CNHP L G M+ G
Sbjct: 877 KNGGTQMSLMNVLMELKKCCNHPYLFAKASLEAPKEKNG-----------MYEG------ 919
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
A ++ +GK +L ++L L+++ R+++ S T +D+ C Y Y R+DG
Sbjct: 920 ---TALIKNAGKFVLLQKMLRKLKEQGH-RVLIFSQMTMMMDIMEDFCDVEGYKYERIDG 975
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
+ + RQ ++ +N P +FVFLLS++AGG G+NL + ++++D DWNP ND QA +
Sbjct: 976 SITGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFS 1035
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R R GQK +V IYRF++ G++EE++ K L ++ + +G +S +L
Sbjct: 1036 RAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVV--RAGLGGKEGKSMSKSEL 1093
Query: 689 RDLFTF 694
D+ +
Sbjct: 1094 DDVLRW 1099
>gi|221508955|gb|EEE34524.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma
gondii VEG]
Length = 1551
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 272/548 (49%), Gaps = 70/548 (12%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G V IT P + ++ +Q EG+ ++++ L+ I+G ILAD+MGLGKTLQ+I
Sbjct: 182 GDVFVRITEQPSCIEGKMKHYQIEGLNWLYQ-----LHCLDING-ILADEMGLGKTLQTI 235
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
++L L + K + +++ P S + NW E+KKW R + A T+++
Sbjct: 236 SILAFLQFE----KNIPGPHLVICPRSTLDNWFNEVKKWCP-RFR-PARLHGTKEERQEL 289
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------- 339
+S DP + I +YE + + + LI DEAHR+KN++++ +
Sbjct: 290 YESVLDP-GLFDICITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFR 348
Query: 340 ------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
+N+L E +A++NF P + F ++ S + TE+++
Sbjct: 349 PRRRLLITGTPLQNNLRELWALLNFIMPQLFDVTLDFAALFDFSRLN------TEQQQHQ 402
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
I + L + F+LRR + ++ LPPK + ++ LQ +LY + SKNV+
Sbjct: 403 VI---TTLHRILRPFMLRRLKSDVARDLPPKREIYIFVGMSKLQKKLYADIL-SKNVEVL 458
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
+ ++++L + L+K CNHP L +D ++ G P G
Sbjct: 459 NAMSGSKTQMLNILMQLRKCCNHPYL-FDGVEPGPPYVEGEH------------------ 499
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
VE +GKM +L +LL L+ R++L S T+ LD+ CR R + Y R+D
Sbjct: 500 ------MVEAAGKMALLDKLLPRLKAE-GSRVLLFSQMTRLLDIVDDYCRWRGFDYCRID 552
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G T ++RQ+ ++ FN +F+FLLS++AGG G+NL + ++LFD D+NP D QA
Sbjct: 553 GGTPGTERQERIDEFNAEGSKKFLFLLSTRAGGLGINLATADIVILFDSDFNPQMDLQAM 612
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSATQGNFLSTE 686
R R GQKKRV +YRF++ T+E K+ +R K L VIQ+ + S ST
Sbjct: 613 DRAHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQKGRLSQSNQAQKGPSTN 672
Query: 687 DLRDLFTF 694
+L + F
Sbjct: 673 ELHAILQF 680
>gi|237833381|ref|XP_002365988.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma
gondii ME49]
gi|211963652|gb|EEA98847.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma
gondii ME49]
Length = 1556
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 272/548 (49%), Gaps = 70/548 (12%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G V IT P + ++ +Q EG+ ++++ L+ I+G ILAD+MGLGKTLQ+I
Sbjct: 182 GDVFVRITEQPSCIEGKMKHYQIEGLNWLYQ-----LHCLDING-ILADEMGLGKTLQTI 235
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
++L L + K + +++ P S + NW E+KKW R + A T+++
Sbjct: 236 SILAFLQFE----KNIPGPHLVICPRSTLDNWFNEVKKWCP-RFR-PARLHGTKEERQEL 289
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------- 339
+S DP + I +YE + + + LI DEAHR+KN++++ +
Sbjct: 290 YESVLDP-GLFDICITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFR 348
Query: 340 ------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
+N+L E +A++NF P + F ++ S + TE+++
Sbjct: 349 PRRRLLITGTPLQNNLRELWALLNFIMPQLFDVTLDFAALFDFSRLN------TEQQQHQ 402
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
I + L + F+LRR + ++ LPPK + ++ LQ +LY + SKNV+
Sbjct: 403 VI---TTLHRILRPFMLRRLKSDVARDLPPKREIYIFVGMSKLQKKLYADIL-SKNVEVL 458
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
+ ++++L + L+K CNHP L +D ++ G P G
Sbjct: 459 NAMSGSKTQMLNILMQLRKCCNHPYL-FDGVEPGPPYVEGEH------------------ 499
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
VE +GKM +L +LL L+ R++L S T+ LD+ CR R + Y R+D
Sbjct: 500 ------MVEAAGKMALLDKLLPRLKAE-GSRVLLFSQMTRLLDIVDDYCRWRGFDYCRID 552
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G T ++RQ+ ++ FN +F+FLLS++AGG G+NL + ++LFD D+NP D QA
Sbjct: 553 GGTPGTERQERIDEFNAEGSKKFLFLLSTRAGGLGINLATADIVILFDSDFNPQMDLQAM 612
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSATQGNFLSTE 686
R R GQKKRV +YRF++ T+E K+ +R K L VIQ+ + S ST
Sbjct: 613 DRAHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQKGRLSQSNQAQKGPSTN 672
Query: 687 DLRDLFTF 694
+L + F
Sbjct: 673 ELHAILQF 680
>gi|448097434|ref|XP_004198673.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
gi|359380095|emb|CCE82336.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
Length = 1044
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 256/533 (48%), Gaps = 80/533 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LR +Q +G+ ++ LN ILAD+MGLGKTLQ+I+ L L P
Sbjct: 131 LREYQIQGLNWLISLYENRLNG------ILADEMGLGKTLQTISFLGYLRYLKHIPGPF- 183
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL--CESTRDDVVSGIDSFTDPCSSLQVLI 301
I++ P S + NW E W V ++ L + R +++ TD V+I
Sbjct: 184 ---IVIVPKSTLDNWRREFAAWTPD-VNILVLQGAKEERQNLIQERLLSTD----FDVVI 235
Query: 302 VSYETF---RMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN------------------ 339
S+E R H KF ++ DEAHR+KN D +L+
Sbjct: 236 TSFEMVIRERAHLRKFRWQ----YIVVDEAHRIKNEDSSLSQILREFYSKNRLLITGTPL 291
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+N+L E +A++NF P + GD+ F ++E + + +E +K + +L +
Sbjct: 292 QNNLHELWALLNFLLPDVFGDSELFDEWFE-----NQSGDSQQEREKNQDKVVQQLHKLL 346
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKI 457
+ F+LRR + + L PKI V +T +Q + Y + V + + ++++
Sbjct: 347 SPFLLRRVKSDVETSLLPKIETNVYIGMTDMQIQWYRKLLEKDIDAVNGVVGKREGKTRL 406
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
L + L+K CNHP L +D + G P TT D V
Sbjct: 407 LNIVMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DEHLVYN 441
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
+GKM +L ++L Q+ R+++ S ++ LD+ C R Y Y R+DG+TS R
Sbjct: 442 AGKMIILDKMLKKF-QKEGSRVLIFSQMSRLLDILEDYCYLRDYNYCRIDGSTSHEDRIS 500
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
++ FN P ++F+FLL+++AGG G+NL + +VL+D DWNP D QA R R GQKK
Sbjct: 501 SIDDFNAPDSDKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKK 560
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQ-EQTDSSATQGNFLSTEDL 688
+V ++RF++ IEEKV R K L K VIQQ Q +S + GN S +DL
Sbjct: 561 QVKVFRFVTENAIEEKVLDRAAQKLRLDKLVIQQGRQNNSGTSIGN--SKDDL 611
>gi|221488451|gb|EEE26665.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma
gondii GT1]
Length = 1556
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 272/548 (49%), Gaps = 70/548 (12%)
Query: 168 GGNLVPITVDPLLVRF-LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSI 226
G V IT P + ++ +Q EG+ ++++ L+ I+G ILAD+MGLGKTLQ+I
Sbjct: 182 GDLFVRITEQPSCIEGKMKHYQIEGLNWLYQ-----LHCLDING-ILADEMGLGKTLQTI 235
Query: 227 ALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSG 286
++L L + K + +++ P S + NW E+KKW R + A T+++
Sbjct: 236 SILAFLQFE----KNIPGPHLVICPRSTLDNWFNEVKKWCP-RFR-PARLHGTKEERQEL 289
Query: 287 IDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTN------- 339
+S DP + I +YE + + + LI DEAHR+KN++++ +
Sbjct: 290 YESVLDP-GLFDICITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFR 348
Query: 340 ------------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKL 387
+N+L E +A++NF P + F ++ S + TE+++
Sbjct: 349 PRRRLLITGTPLQNNLRELWALLNFIMPQLFDVTLDFAALFDFSRL------NTEQQQHQ 402
Query: 388 GIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRA 447
I + L + F+LRR + ++ LPPK + ++ LQ +LY + SKNV+
Sbjct: 403 VI---TTLHRILRPFMLRRLKSDVARDLPPKREIYIFVGMSKLQKKLYADIL-SKNVEVL 458
Query: 448 ISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSW 507
+ ++++L + L+K CNHP L +D ++ G P G
Sbjct: 459 NAMSGSKTQMLNILMQLRKCCNHPYL-FDGVEPGPPYVEGEH------------------ 499
Query: 508 TGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 567
VE +GKM +L +LL L+ R++L S T+ LD+ CR R + Y R+D
Sbjct: 500 ------MVEAAGKMALLDKLLPRLKAE-GSRVLLFSQMTRLLDIVDDYCRWRGFDYCRID 552
Query: 568 GTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 627
G T ++RQ+ ++ FN +F+FLLS++AGG G+NL + ++LFD D+NP D QA
Sbjct: 553 GGTPGTERQERIDEFNAEGSKKFLFLLSTRAGGLGINLATADIVILFDSDFNPQMDLQAM 612
Query: 628 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQEQTDSSATQGNFLSTE 686
R R GQKKRV +YRF++ T+E K+ +R K L VIQ+ + S ST
Sbjct: 613 DRAHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQKGRLSQSNQAQKGPSTN 672
Query: 687 DLRDLFTF 694
+L + F
Sbjct: 673 ELHAILQF 680
>gi|341900249|gb|EGT56184.1| hypothetical protein CAEBREN_32223 [Caenorhabditis brenneri]
Length = 1816
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 159/546 (29%), Positives = 249/546 (45%), Gaps = 84/546 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L P+Q EG+ ++ C S +A ILAD+MGLGKT+QS+ LYTL+ +G P
Sbjct: 619 LHPYQLEGINWLRHCWSNGTDA------ILADEMGLGKTVQSLTFLYTLMKEGHCKGPF- 671
Query: 244 KKAIIVTPTSLVSNWEAEIKKW---------VGGRVQLIALCESTRDDVVSGIDS----- 289
+I P S + NWE E ++W VG R + L E V + S
Sbjct: 672 ---LIAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPKAG 728
Query: 290 --FTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNRN------ 341
T VL+ SYET M + S E L+ DEAHRLKN+Q+L +N
Sbjct: 729 KMKTTENMKFHVLLTSYETINMDKTILSSIE-WGALVVDEAHRLKNNQSLFFKNLNEYTI 787
Query: 342 -------------DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+LEE F ++NF + F + +E K+
Sbjct: 788 HYRVLLTGTPLQNNLEELFHLLNFLSAERFNQLEAFTAEF------------SEISKEDQ 835
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
IE+ L + +LRR A + +P K +V +L+P+Q + Y + + +
Sbjct: 836 IEKLHNL---LGPHMLRRLKADVLTGMPSKSELIVRVELSPMQKKWYKNILTRNFDALNV 892
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
Q ++ + LKK CNHP L G M+ G
Sbjct: 893 KNGGTQMSLMNVLMELKKCCNHPYLFAKASLEAPKEKNG-----------MYEG------ 935
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
A ++ +GK +L ++L L+++ R+++ S T LD+ C Y Y R+DG
Sbjct: 936 ---TALIKNAGKFVLLQKMLRKLKEQGH-RVLIFSQMTMMLDIMEDFCDVEGYKYERIDG 991
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
+ + RQ ++ +N P +FVFLLS++AGG G+NL + ++++D DWNP ND QA +
Sbjct: 992 SITGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFS 1051
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R R GQK +V IYRF++ G++EE++ K L ++ + +G +S +L
Sbjct: 1052 RAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVV--RAGLGGKEGKSMSKSEL 1109
Query: 689 RDLFTF 694
D+ +
Sbjct: 1110 DDVLRW 1115
>gi|56118945|ref|NP_001007993.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
gi|51704071|gb|AAH80870.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
Length = 1049
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 249/509 (48%), Gaps = 75/509 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 176 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRSIPGPHM 229
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLI 301
V + P S + NW AE K+WV L A+C +D + + P V +
Sbjct: 230 V-----LVPKSTLHNWMAEFKRWVPS---LCAICLIGDKDHRAAFVRDVLLP-GEWDVCV 280
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------ND 342
SYE S F + L+ DEAHR+KN+++ TNR N+
Sbjct: 281 TSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 339
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + A F +++T+ G ++KL +ER L + F
Sbjct: 340 LHELWALLNFLLPDVFNSAEDFDSWFDTNNCLG--------DQKL-VER---LHMVLKPF 387
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
+LRR A + LPPK + L+ +Q E Y + S +T + ++L +
Sbjct: 388 LLRRIKADVEKSLPPKKEIKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILM 447
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 448 QLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHLVTNSGKMV 482
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +RQ + +
Sbjct: 483 VLDKLLPRLKEQGS-RVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSIIAY 541
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N P ++F+F+LS++AGG G+NL + ++++D DWNP D QA R R GQ K V ++
Sbjct: 542 NAPGSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVF 601
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
R+++ T+EE++ +R K L ++ Q+
Sbjct: 602 RYITDNTVEERIVERAEMKLRLDSIVIQQ 630
>gi|410057731|ref|XP_003954270.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan troglodytes]
Length = 863
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 208/394 (52%), Gaps = 51/394 (12%)
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DE H+++N +N+L E +++ +F PG LG
Sbjct: 13 VILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPV 72
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIE 421
F + I G A+ + K + + L +N ++LRR ++ +S LP K +
Sbjct: 73 FMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQ 132
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
V+ C+LT Q ++Y +F+ SK V R ++ E + I + + AL+K+CNHP L SG
Sbjct: 133 VLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQ---IFSGLIALRKICNHPDLF-----SG 184
Query: 482 NPGT-TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
P G D E+ + G W + SGKM V+ LL + + R++
Sbjct: 185 GPKNLKGLPD------DELEEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVL 229
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
L S Q LD+ R ++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG
Sbjct: 230 LFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGG 288
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
G+NL G NR+V++DPDWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+
Sbjct: 289 LGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIF 348
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
K+ L + ++ Q F + DL +LFT
Sbjct: 349 KQFLTNRVLKD-----PKQRRFFKSNDLYELFTL 377
>gi|323454552|gb|EGB10422.1| hypothetical protein AURANDRAFT_10276, partial [Aureococcus
anophagefferens]
Length = 505
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 255/545 (46%), Gaps = 83/545 (15%)
Query: 182 RFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLL--CQGFDG 239
R L PHQR V +++ L+ G G I+ D+MGLGKT Q A L L +G D
Sbjct: 14 RRLFPHQRRAVSWLWA-----LHGEGCGG-IVGDEMGLGKTAQVGAFLGALADGPRGPDR 67
Query: 240 KPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQV 299
+ + A+I+ PT+++S+W E+ W R +++ L S+ + D P S +
Sbjct: 68 FDVCRSALILAPTTMLSHWVRELHAW-APRARVVVLHRSS-----ARFDEAETP--SCVL 119
Query: 300 LIVSYETF-RMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN------------------ 339
+ SY+ R+ + + S +L DE +L+N D +T
Sbjct: 120 CVASYDAVHRLADALLAVPWSYAVL--DEGQKLRNPDSRVTQLCKRLRTPRRLLLSGTPV 177
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+N L E +++ +F PG LG F + I G A + +L + L +
Sbjct: 178 QNSLRELWSLFDFAVPGRLGTLKAFDQELAQPIRAGGFAGARPAQVQLAYRCAVALRDLI 237
Query: 400 NQFILRRTNALLSNH------LPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET- 452
++LRRT A L+ LPPK V+ C L+ Q +LY H + +V++A++ +
Sbjct: 238 QPYLLRRTKAALTAAGDSGVALPPKTEHVLLCALSQDQIDLYRHVLDGDDVRKALAGDGG 297
Query: 453 KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDG 512
+Q+ I AL+K+CNHP L + PG + RS D
Sbjct: 298 QQATAFRAIAALRKICNHPDLYGGPPEGEPPGA---------------ASRSSKLAALDA 342
Query: 513 AWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSI 572
V + H R+++ S LD+ L R + Y R+DG T+
Sbjct: 343 VLVRWKAQGH---------------RVLVFSQTIAMLDVLEALVVARGWRYGRMDGGTAP 387
Query: 573 SKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 632
+ RQ + FN SK F+ LL+++ GG GL+L+G +R+VL+DPDWNP D QA R WR
Sbjct: 388 AARQATADAFNASSKT-FLMLLTTRTGGVGLSLVGADRVVLYDPDWNPQTDAQARERSWR 446
Query: 633 DGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSATQGNFLSTEDLRDL 691
GQ K V IYR + GTIEEK+Y RQ+ K+ L KV+ S A Q S +L +L
Sbjct: 447 LGQTKPVTIYRLVCAGTIEEKIYHRQIFKQALTNKVL------SDAKQRRLFSQSELGEL 500
Query: 692 FTFHD 696
FT D
Sbjct: 501 FTLGD 505
>gi|346325999|gb|EGX95595.1| DNA excision repair protein [Cordyceps militaris CM01]
Length = 1111
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 177/629 (28%), Positives = 292/629 (46%), Gaps = 97/629 (15%)
Query: 138 VENNVIEENFTLPP--GVDPLVLWQP-EEPQNDGGNLVPITVDPLLVRFLRPHQREGVQF 194
+EN + E PP G+ P ++ E PQ+ G L+P + ++LR +Q EGV+F
Sbjct: 139 IEN--LSERPVFPPSSGIRPRRAYEDIELPQSAG--LIPAPI----AQYLRDYQIEGVKF 190
Query: 195 MFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVK---------- 244
+ G IL DDMGLGKT+Q +A L + D + +
Sbjct: 191 LHR------KFVYQEGGILGDDMGLGKTVQVVAFLTAAFGKTGDERDKRRLRQMRWYSTD 244
Query: 245 ----KAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL 300
+ +I+ P SL+ NW+ E+ +W G Q +DDV+ T +++
Sbjct: 245 RWYPRILIICPGSLLVNWKNELDRW--GWWQAEIYHGPNKDDVLG-----TMRAGMSEIM 297
Query: 301 IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------N 341
I +Y+T++ S + + D +I DE H+LK ++ T + N
Sbjct: 298 ITTYDTYKNSRSAVNMVQ-WDAVIADECHKLKGHRSETTKAMNEINALCRIGLTGTAIQN 356
Query: 342 DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV-N 400
EE + ++++TNPG G + + + G+ AT + L + + +L V
Sbjct: 357 KYEELWTLLDWTNPGNFGTRTEWSQTISKPLTVGQSHEATLAQLSLARQTAQKLVKNVLP 416
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVK--RAISE-------- 450
++ LRR +L+++ LP K VV C LT LQ + Y++F+ S +V R ISE
Sbjct: 417 RYFLRRMKSLIADQLPKKTDRVVFCPLTDLQKQAYDNFLESDDVSVIRNISEPCPHDKKL 476
Query: 451 -----------ETKQSKILAYITALKKLCNHPKLIY----DTIKSGNPGTTGFEDCIRFF 495
T QS + + +L+KL NH L+ D N + C+
Sbjct: 477 GWCCRRYISNGRTWQSAVFPSMMSLQKLSNHMTLLVPSATDLDVKQNSELHTLQVCVPDK 536
Query: 496 PPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQL 555
+++ R G+ E GK V+ +LL D++++ S+ + L + L
Sbjct: 537 WQSLYAQRDQI---GNLVNPEFCGKWKVMKKLL-KFWHSNGDKVLVFSHSVRLLRILQHL 592
Query: 556 CRERRYPYLRLDGTTSISKRQKLVNHFN-DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLF 614
Y LDG+ S +RQ++V+ FN DP+ +FVFL+S++AGG GLN+ N++V+
Sbjct: 593 FTNTSYTVSYLDGSLSYEQRQEVVDTFNSDPT--QFVFLISTRAGGVGLNITSANKVVIV 650
Query: 615 DPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTD 674
DP WNP+ D QA R +R GQ + V ++R +S GT+EE VY RQ+ K+ + ++
Sbjct: 651 DPHWNPSFDLQAQDRAYRIGQVRDVEVFRLISLGTVEEIVYARQVYKQQQANIGYTASSE 710
Query: 675 SSATQGNFLSTE------DLRDLFTFHDD 697
+G + L ++FTFH D
Sbjct: 711 RRYFRGVQQDADRKGEIFGLSNIFTFHSD 739
>gi|241949239|ref|XP_002417342.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
gi|223640680|emb|CAX44987.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
Length = 1017
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 259/537 (48%), Gaps = 76/537 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LRP+Q +G+ ++ L+ + G ILAD+MGLGKTLQ+I+ L Y +G +G +
Sbjct: 132 LRPYQIQGLNWLIS-----LHENNLSG-ILADEMGLGKTLQTISFLGYLRFIRGINGPHL 185
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V +TP S + NW+ E +W+ ++++ L + +D+ I + C V+I
Sbjct: 186 V-----ITPKSTLDNWQREFNRWIPD-IKVLVL-QGDKDERADLIKNKVMTCD-FDVIIS 237
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------NDL 343
SYE + + +I DEAHR+KN+++L ++ N+L
Sbjct: 238 SYEIVIREKATLKKFD-WQYIIIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNL 296
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + + F +++ + E + S+L + F+
Sbjct: 297 RELWALLNFIVPDVFAENESFDEWFQKD---------SNNENGGEDQVVSQLHKVLKPFL 347
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILAYI 461
LRR A + L PK V K++P+Q LY + V A ++ ++++L +
Sbjct: 348 LRRIKADVEKSLLPKKELNVYVKMSPMQKNLYQKILEKDIDAVNGANGKKESKTRLLNIV 407
Query: 462 TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM 521
L+K CNHP L ++ ++ G P TT D V S KM
Sbjct: 408 MQLRKCCNHPYL-FEGVEPGPPYTT------------------------DEHLVFNSQKM 442
Query: 522 HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH 581
+L +LL +Q R+++ S ++ LD+ C R Y Y R+DG T S R ++
Sbjct: 443 LILDQLLKKFQQEGS-RVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHSDRINAIDE 501
Query: 582 FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI 641
+N P +F+FLL+++AGG G+NL + ++LFD DWNP D QA R R GQ K+V +
Sbjct: 502 YNKPGSEKFIFLLTTRAGGLGINLTSADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKV 561
Query: 642 YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGN----FLSTEDLRDLFTF 694
+RF++ IEEKV +R K L +++ Q+ ++ G S +L D+ F
Sbjct: 562 FRFITERAIEEKVLERAAQKLRLDQLVIQQGRNTGGLDGQQSSKAASKNELLDMIQF 618
>gi|194381160|dbj|BAG64148.1| unnamed protein product [Homo sapiens]
Length = 863
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 208/394 (52%), Gaps = 51/394 (12%)
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DE H+++N +N+L E +++ +F PG LG
Sbjct: 13 VILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPV 72
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRR--TNALLSNHLPPKIIE 421
F + I G A+ + K + + L +N ++LRR ++ +S LP K +
Sbjct: 73 FMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQ 132
Query: 422 VVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITALKKLCNHPKLIYDTIKSG 481
V+ C+LT Q ++Y +F+ SK V R ++ E + I + + AL+K+CNHP L SG
Sbjct: 133 VLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQ---IFSGLIALRKICNHPDLF-----SG 184
Query: 482 NPGT-TGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIV 540
P G D E+ + G W + SGKM V+ LL + + R++
Sbjct: 185 GPKNLKGLPD------DELEEDQFGYW--------KRSGKMIVVESLL-KIWHKQGQRVL 229
Query: 541 LVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGG 600
L S Q LD+ R ++Y YL++DGTT+I+ RQ L+ +N+ + + FVFLL+++ GG
Sbjct: 230 LFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDT-SIFVFLLTTRVGG 288
Query: 601 CGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMS 660
G+NL G NR+V++DPDWNP+ D QA R WR GQKK+V +YR L+ GTIEEK+Y RQ+
Sbjct: 289 LGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIF 348
Query: 661 KEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTF 694
K+ L + ++ Q F + DL +LFT
Sbjct: 349 KQFLTNRVLKD-----PKQRRFFKSNDLYELFTL 377
>gi|327277378|ref|XP_003223442.1| PREDICTED: probable global transcription activator SNF2L1-like
[Anolis carolinensis]
Length = 1049
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 245/508 (48%), Gaps = 73/508 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ +M L G++G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 174 LRDYQVRGLNWMIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 227
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L A+C D + V +
Sbjct: 228 V-----LVPKSTLHNWMNEFKRWVPS---LRAVCLIGDKDARAAFIRDVMMPGEWDVCVT 279
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------NDL 343
SYE S F + L+ DEAHR+KN+++ TNR N+L
Sbjct: 280 SYEMVIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNL 338
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 339 HELWALLNFLLPDVFNSAEDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 386
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR A + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 387 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQ 446
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 447 LRKCCNHPYL-FDGAEPGPPYTT------------------------DTHLVTNSGKMVA 481
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +R++ ++ FN
Sbjct: 482 LDKLLSKLKEQ-GSRVLVFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 540
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 541 APNSRKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 600
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
++ T+EE++ +R K L ++ Q+
Sbjct: 601 LITDNTVEERIVERAEIKLRLDSIVIQQ 628
>gi|324500543|gb|ADY40253.1| ATP-dependent helicase brm [Ascaris suum]
Length = 1261
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 250/519 (48%), Gaps = 67/519 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+P+Q +GV++M + LN ILADDMGLGKT+Q+IAL+ L+ + K +
Sbjct: 484 LKPYQLKGVEWMVSLFNNNLNG------ILADDMGLGKTIQTIALIAYLM----EVKKVN 533
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL-CESTRDDVVSGIDSFTDPCSSLQVLIV 302
+I+ P S +SNWE E++KW V+++ C R + I VL+
Sbjct: 534 GPYLIIVPLSTISNWEFELEKWAPSVVKVVYKGCRKMRRTLGGIILR-----EMFNVLLT 588
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN-------------------RND 342
+Y+ + + + +I DE HR++N D LT +N
Sbjct: 589 TYD-YVLKEKALLGRIRWEYIIIDEGHRIRNHDCKLTRTLNGFFNARHRLLLTGTPVQNK 647
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSI-ICGREPTATEEEKKLGIERSSELSAKVNQ 401
L E +A++NF P I F +++ G + +EEE L I R L +
Sbjct: 648 LPELWALLNFLLPSIFSSCDTFEQWFNAPFATSGEKIELSEEETMLIIRR---LHKVLRP 704
Query: 402 FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI 461
F+LRR + LP K ++ C+++ LQ LY H K V I ++LA
Sbjct: 705 FLLRRLKKEVEGQLPEKAEHLLRCEMSALQKTLYQHM--QKGV--LIDSNRIGGRLLANT 760
Query: 462 TA-LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
L+KLCNHP ++ +I+ E+C ++ SGR GG K
Sbjct: 761 AMQLRKLCNHP-FLFQSIE---------EECRNYWKVPEISGRDLYRVGG---------K 801
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
+L R+L L+ T R+++ T + + R+Y YLRLDG T R+KL++
Sbjct: 802 FELLDRILLKLKV-TGHRLLMFCQMTSLMSIMEDFLIYRQYRYLRLDGNTKSDDREKLLD 860
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
+N P F+FLLS+++GG GLNL + +V+FD DWNP DKQA +R R GQ + V
Sbjct: 861 LYNAPQSEYFIFLLSTRSGGIGLNLQSADTVVIFDSDWNPHQDKQAESRAHRIGQSREVR 920
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQTDSSAT 678
+ R ++ +IEEK+ K + +KVIQ + D +T
Sbjct: 921 VLRLITVNSIEEKIQATAKCKLDIDKKVIQAGRFDQRST 959
>gi|156383405|ref|XP_001632824.1| predicted protein [Nematostella vectensis]
gi|156219886|gb|EDO40761.1| predicted protein [Nematostella vectensis]
Length = 1022
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 257/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
+R +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 144 MRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKNFRNVPGPHM 197
Query: 243 VKKAIIVTPTSLVSNWEAEIKKW---------VGGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S ++NW AE ++W +G + Q A RD ++ G D
Sbjct: 198 V-----ICPKSTLANWMAEFERWCPSIRAVCLIGNQEQRTAFI---RDTMLPGE---WDV 246
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT---------------- 336
C +S +++I F+ + ++ ++ DEAHR+KN+++
Sbjct: 247 CVTSYEMVIREKAVFKKFAWRY--------IVIDEAHRIKNEKSKLSEIVRELRSANRLL 298
Query: 337 LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
LT +N+L E +A++NF P + + F ++ ++ + EEK+L +ER
Sbjct: 299 LTGTPLQNNLHELWALLNFLLPDVFSSSDDFDAWFNSNNLV--------EEKQL-VER-- 347
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + + F+LRR + + L PK V LT +Q Y + + +T
Sbjct: 348 -LHSVLRPFLLRRLKSDVEKRLLPKKETKVYTGLTKMQRSWYTKILMKDIDVVNGAGKTD 406
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 407 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DVH 441
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
+E SGKM VL +LL L+Q R+++ S T+ LD+ C R+Y Y RLDG T
Sbjct: 442 LIENSGKMRVLDKLLARLKQE-GSRVLIFSQMTRLLDILEDYCLWRQYDYCRLDGQTPHE 500
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ +N FN P +F+F+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 501 ERQAYINSFNMPGSTKFIFMLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRI 560
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQKK+V ++RF+S T+EE++ +R K L V+ Q+
Sbjct: 561 GQKKQVKVFRFISESTVEERIIERAEMKLRLDAVVIQQ 598
>gi|19115773|ref|NP_594861.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe 972h-]
gi|46397295|sp|Q9UTN6.1|SNF21_SCHPO RecName: Full=Chromatin structure-remodeling complex subunit snf21;
AltName: Full=ATP-dependent helicase snf21; AltName:
Full=RSC complex subunit snf21
gi|5830480|emb|CAB54824.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe]
gi|42558224|dbj|BAD11105.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Schizosaccharomyces pombe]
Length = 1199
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 255/533 (47%), Gaps = 92/533 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+ +Q G+Q+M + LN ILAD+MGLGKT+Q+I+L+ L+ + P
Sbjct: 417 LKEYQLRGLQWMISLYNNHLNG------ILADEMGLGKTIQTISLITHLIEKKRQNGPF- 469
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLI---------ALCESTRDDVVSGIDSFTDPC 294
+++ P S ++NW E ++W V+++ AL R
Sbjct: 470 ---LVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRH------------- 513
Query: 295 SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT-LTN-------------- 339
S+ QVL+ +YE + + +I DE HR+KN Q+ LTN
Sbjct: 514 SNFQVLLTTYE-YIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLIL 572
Query: 340 -----RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSI--ICGREPTA-TEEEKKLGIER 391
+N+L E +A++NF P I F ++ T G++ TEEE L I R
Sbjct: 573 TGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRR 632
Query: 392 SSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHF-----IHSKNVKR 446
L + F+LRR + LP K+ +V+ C+++ LQ +LY ++ ++ KR
Sbjct: 633 ---LHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKR 689
Query: 447 AISEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+T + + LKK+CNHP + D +S +P TGF
Sbjct: 690 G---KTGIKGLQNTVMQLKKICNHPFVFEDVERSIDP--TGF------------------ 726
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
D W +SGK +L R+L L R+ RI++ TQ +++ R++ YLRL
Sbjct: 727 --NYDMLW-RVSGKFELLDRILPKLF-RSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRL 782
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DG+T R KL+ FNDP+ +FLLS++AGG GLNL + +++FD DWNP D QA
Sbjct: 783 DGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQA 842
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSAT 678
R R GQ K V IYR ++ ++EE + R K + KVIQ + D+ +T
Sbjct: 843 QDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKST 895
>gi|410917974|ref|XP_003972461.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Takifugu rubripes]
Length = 1036
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 251/509 (49%), Gaps = 75/509 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
+R +Q G+ ++ L GI+G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 162 MRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTIALLGYMKHYRNIPGPHM 215
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLI 301
V + P S + NW E K+WV L A+C RD+ + I P V +
Sbjct: 216 V-----LVPKSTLYNWMNEFKRWVPS---LRAVCLIGDRDERTALIRDVLLP-GEWDVCV 266
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------ND 342
SYE + + F + L+ DEAHR+KN+++ TNR N+
Sbjct: 267 TSYEMLIIEKAVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 325
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + A F +++T+ G ++KL +ER L + F
Sbjct: 326 LHELWALLNFLLPDVFNSAEDFDSWFDTNNCLG--------DQKL-VER---LHTVLRPF 373
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
+LRR A + L PK + L+ +Q E Y + + + + ++L +
Sbjct: 374 LLRRIKADVEKTLLPKKELKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILM 433
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L +D + G P TT + SGKM
Sbjct: 434 QLRKCCNHPYL-FDGAEPGPPYTTDLHLVVN------------------------SGKMV 468
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL L+ + R+++ S T+ LD+ C R Y Y RLDG T +RQ +N F
Sbjct: 469 VLDKLLPKLKDQ-GSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAF 527
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N+P+ ++F+F+LS++AGG G+NL + ++LFD DWNP D QA R R GQ+K+V ++
Sbjct: 528 NEPNSSKFIFMLSTRAGGLGINLATADVVILFDSDWNPQVDLQAMDRAHRIGQQKQVRVF 587
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
R+++ T+EE++ +R K L ++ Q+
Sbjct: 588 RYITENTVEERIVERAEMKLRLDSIVIQQ 616
>gi|296415159|ref|XP_002837259.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633120|emb|CAZ81450.1| unnamed protein product [Tuber melanosporum]
Length = 1362
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 250/525 (47%), Gaps = 75/525 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+ +Q +G+Q+M + LN ILAD+MGLGKT+Q+I+L+ L+ + P
Sbjct: 478 LKDYQLKGLQWMISLYNNNLNG------ILADEMGLGKTIQTISLITYLIERKKQNGPF- 530
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+++ P S ++NW E +KW G +++ V + S+ QVL+ +
Sbjct: 531 ---LVIVPLSTLTNWNLEFEKWAPGVGKIVYKGPP----AVRKNQQYDIKFSNWQVLLTT 583
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-----TLTN---------------RNDL 343
YE + + + +I DE HR+KN Q TLT +N+L
Sbjct: 584 YE-YIIKDRPLLSKVKWNYMIIDEGHRMKNSQSKLSATLTTYYNCRYRLILTGTPLQNNL 642
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSI--ICGREPTA-TEEEKKLGIERSSELSAKVN 400
E +A++NF P I F ++ T G++ TEEE L I R L +
Sbjct: 643 PELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEALLVIRR---LHKVLR 699
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILA- 459
F+LRR + + LP K+ V+ CK + LQ +LY ++ N ++E K K+
Sbjct: 700 PFLLRRLKKDVESELPDKVERVIKCKFSALQQKLYQQMMN--NGILYVNEPDKGGKLGVR 757
Query: 460 ----YITALKKLCNHPKLIYDTIKSG-NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
I L+KLCNHP +++ ++S NP + D W
Sbjct: 758 GLSNMIMQLRKLCNHP-FVFEEVESAINP----------------------TKVNNDALW 794
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
+GK +L RLL T R+++ TQ +++ R + YLRLDG+T
Sbjct: 795 -RTAGKFELLDRLLPKFFA-TRHRVLMFFQMTQIMNIMEDFLHLRGFRYLRLDGSTKADD 852
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
R L+ FN P F+FLLS++AGG GLNL + ++++D DWNP D QA R R G
Sbjct: 853 RSALLKEFNAPDSPYFIFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIG 912
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSAT 678
QK V I R +++ ++EE++ +R K + KVIQ + D+ +T
Sbjct: 913 QKNEVRILRLITSNSVEERILERAQYKLDIDGKVIQAGKFDNKST 957
>gi|296478735|tpg|DAA20850.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin a5 [Bos taurus]
gi|440889489|gb|ELR44647.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos grunniens mutus]
Length = 1052
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 256/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|340520704|gb|EGR50940.1| hypothetical protein TRIREDRAFT_57935 [Trichoderma reesei QM6a]
Length = 1433
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 253/540 (46%), Gaps = 79/540 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+ +Q +G+Q+M + LN ILAD+MGLGKT+Q+I+L+ L+ Q P
Sbjct: 556 LKEYQIKGLQWMISLYNNNLNG------ILADEMGLGKTIQTISLITYLIEQKQQSGPY- 608
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLIV 302
+++ P S ++NW E +KW +++ +TR I QVL+
Sbjct: 609 ---LVIVPLSTLTNWNLEFEKWAPSVARVVYKGPPNTRKLQQEKIRQ-----GRFQVLLT 660
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT---------LTNR-----------ND 342
+YE S + ++I DE HR+KN Q+ T R N+
Sbjct: 661 TYEYIIKDRPILSKIKWFHMII-DEGHRMKNTQSKLSATIQQYYTTRFRLILTGTPLQNN 719
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSI--ICGREPTA-TEEEKKLGIERSSELSAKV 399
L E +AM+NF P I F ++ T G++ TEEE+ L I R L +
Sbjct: 720 LSELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQILVIRR---LHKVL 776
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI-HSK-NVKRAISEETKQSKI 457
F+LRR + LP K +V+ CK + LQS+LY + H+K V +T +
Sbjct: 777 RPFLLRRLKKDVEKDLPDKTEKVIKCKFSALQSKLYKQMVTHNKLVVSDGKGGKTGARGL 836
Query: 458 LAYITALKKLCNHPKLIYDTIKS-GNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
I L+KLCNHP ++D +++ NP D W
Sbjct: 837 SNMIMQLRKLCNHP-FVFDIVENVMNPLNIS----------------------NDLLW-R 872
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
+GK +L R+L + T R+++ T +D+ R R Y YLRLDGTT +R
Sbjct: 873 TAGKFELLDRILPKYKA-TGHRVLMFFQMTAIMDIMEDYLRYRNYKYLRLDGTTKSDERS 931
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
L+ FN P+ F+FLLS++AGG GLNL + ++++D DWNP D QA R R GQK
Sbjct: 932 DLLRDFNAPNSEYFLFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQK 991
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ-------QEQTDSSATQGNFLSTEDL 688
V I R +S+ ++EEK+ +R K + KVIQ +TD A L T D+
Sbjct: 992 NEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADM 1051
>gi|195591505|ref|XP_002085481.1| GD14801 [Drosophila simulans]
gi|194197490|gb|EDX11066.1| GD14801 [Drosophila simulans]
Length = 893
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 261/544 (47%), Gaps = 86/544 (15%)
Query: 184 LRPHQREGVQFM-FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM 242
L P Q EGV ++ + G+ ILAD+MGLGKT+Q++ LY+L +G P
Sbjct: 268 LHPFQMEGVSWLRYSWGQGI-------PTILADEMGLGKTIQTVVFLYSLFKEGHCRGPF 320
Query: 243 VKKAIIVTPTSLVSNWEAEIKKW---------VGGRVQ--LIALCESTRDDVVSGIDSFT 291
+I P S + NWE E++ W VGG+ +I E + ++V +
Sbjct: 321 ----LITVPLSTLPNWERELELWAPELYCVTYVGGKTARAVIRKHELSFEEVTTKTMREN 376
Query: 292 DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----------- 340
V++ SYE + ++ F S L+ DEAHRL+++Q+ R
Sbjct: 377 QTQYKFNVMLTSYEFISLDAA-FLGSIDWAALVVDEAHRLRSNQSKFFRILSRYRIAYKL 435
Query: 341 --------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
N+LEE F ++NF + G D F+ + T+ K+ ++R
Sbjct: 436 LLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEF------------TDVSKEEQVKRL 483
Query: 393 SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET 452
E+ + +LRR + +PPK +V +L+ +Q + Y H + +KN K A++++
Sbjct: 484 HEI---LEPHMLRRLKVDVLKSMPPKSEFIVRVELSSMQKKFYKHIL-TKNFK-ALNQKG 538
Query: 453 --KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ +L + L+K CNHP L + +G +
Sbjct: 539 GGRVCSLLNIMMDLRKCCNHPYLFPSAAEEAPISPSGIYEM------------------- 579
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
+ + SGK+ +L+++L L+ + + R++L S T+ L++ Y Y R+DG
Sbjct: 580 -NSLTKASGKLDLLSKMLKQLK-KDNHRVLLFSQMTKMLNILEHFLEGEGYQYDRIDGAI 637
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
RQK ++ FNDP +FVFLLS++AGG G+NL + +++FD DWNP ND QA +R
Sbjct: 638 RGDLRQKAIDRFNDPGSEQFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRA 697
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
R GQKK+V IYRF++ ++EE++ Q K L ++ + +AT S ++L D
Sbjct: 698 HRMGQKKKVMIYRFVTHNSVEERIMQVAKRKMMLTHLVVRPGMGGTATH---FSKDELED 754
Query: 691 LFTF 694
+ F
Sbjct: 755 ILRF 758
>gi|406604429|emb|CCH44088.1| chromatin-remodeling complex ATPase [Wickerhamomyces ciferrii]
Length = 965
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 264/536 (49%), Gaps = 82/536 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q +G+ ++ + L+ ILAD+MGLGKTLQ+I+ L Y + DG P
Sbjct: 24 LREYQIQGLNWLIQLYENSLSG------ILADEMGLGKTLQTISFLGYLRYNKNIDG-PF 76
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLI 301
+I+ P S + NW E ++W V ++ + R+D++ T + VL+
Sbjct: 77 ----LIIVPKSTLDNWRREFERWTPDVNVCVLQGNKEERNDLIKN----TILETKFDVLV 128
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR-------------------ND 342
S+E S + ++ DEAHR+KN+++ ++ N+
Sbjct: 129 TSFEMVIREKSALK-KLAWQYIVVDEAHRIKNEESALSQIIRLFYSKNRLLITGTPLQNN 187
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + GD+ F +++E E+++ L I+ +L +N F
Sbjct: 188 LHELWALLNFILPDVFGDSEVFDQWFENQ----------EDDQDLVIQ---QLHKVLNPF 234
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKILAY 460
+LRR + + L PK + ++ +Q + Y + V + + ++++L
Sbjct: 235 LLRRVKSDVEKSLLPKKEVNLYVGMSEMQVKWYQKLLEKDIDAVNGVVGKREGKTRLLNI 294
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGK 520
+ L+K CNHP L ++ + G P TT D V SGK
Sbjct: 295 VMQLRKCCNHPYL-FEGAEPGPPFTT------------------------DEHLVFNSGK 329
Query: 521 MHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVN 580
M +L +LL ++++ R+++ S ++ LD+ C R Y Y R+DG+TS R ++
Sbjct: 330 MVILDKLLKKMKEQGS-RVLIFSQMSRVLDILEDYCFFRDYEYCRIDGSTSHEDRIAAID 388
Query: 581 HFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVF 640
+N P ++F+FLL+++AGG G+NL + +VL+D DWNP D QA R R GQKK+V
Sbjct: 389 DYNKPDSDKFIFLLTTRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVM 448
Query: 641 IYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQ-EQTDSSATQGNFLSTEDLRDLFTF 694
++RF++ IEEKV +R K L Q VIQQ + ++ GN + EDL + F
Sbjct: 449 VFRFVTEDAIEEKVIERATQKLRLDQLVIQQGRAVNKNSAIGN--NKEDLLSMIQF 502
>gi|448101270|ref|XP_004199521.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
gi|359380943|emb|CCE81402.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
Length = 1044
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 256/533 (48%), Gaps = 80/533 (15%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
LR +Q +G+ ++ LN ILAD+MGLGKTLQ+I+ L L P
Sbjct: 131 LREYQIQGLNWLISLYENRLNG------ILADEMGLGKTLQTISFLGYLRYLKHIPGPF- 183
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIAL--CESTRDDVVSGIDSFTDPCSSLQVLI 301
I++ P S + NW E W V ++ L + R +++ TD V+I
Sbjct: 184 ---IVIVPKSTLDNWRREFATWTPD-VNILVLQGSKEERQNLIQERLLSTD----FDVVI 235
Query: 302 VSYETF---RMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN------------------ 339
S+E R H KF ++ DEAHR+KN D +L+
Sbjct: 236 TSFEMVIRERAHLKKFRWQ----YIVVDEAHRIKNEDSSLSQILREFYSKNRLLITGTPL 291
Query: 340 RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
+N+L E +A++NF P + GD+ F ++E + + +E +K + +L +
Sbjct: 292 QNNLHELWALLNFLLPDVFGDSELFDEWFE-----NQSGDSQQEREKNQDKVVQQLHKLL 346
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSK--NVKRAISEETKQSKI 457
+ F+LRR + + L PKI V +T +Q + Y + V + + ++++
Sbjct: 347 SPFLLRRVKSDVETSLLPKIETNVYIGMTDMQIQWYRKLLEKDIDAVNGVVGKREGKTRL 406
Query: 458 LAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVEL 517
L + L+K CNHP L +D + G P TT D V
Sbjct: 407 LNIVMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DEHLVYN 441
Query: 518 SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQK 577
+GKM +L ++L Q+ R+++ S ++ LD+ C R Y Y R+DG+TS R
Sbjct: 442 AGKMIILDKMLRKF-QKEGSRVLIFSQMSRLLDILEDYCYLRDYNYCRIDGSTSHEDRIS 500
Query: 578 LVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKK 637
++ FN P ++F+FLL+++AGG G+NL + ++L+D DWNP D QA R R GQKK
Sbjct: 501 SIDDFNAPDSDKFIFLLTTRAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQKK 560
Query: 638 RVFIYRFLSTGTIEEKVYQRQMSKEGLQK-VIQQ-EQTDSSATQGNFLSTEDL 688
+V ++RF++ IEEKV R K L K VIQQ Q +S + GN S +DL
Sbjct: 561 QVKVFRFVTENAIEEKVLDRAAQKLRLDKLVIQQGRQNNSGTSIGN--SKDDL 611
>gi|157427958|ref|NP_001098886.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos taurus]
gi|157279332|gb|AAI53226.1| SMARCA5 protein [Bos taurus]
Length = 1052
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 256/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDL 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|148678936|gb|EDL10883.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 993
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 121 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 174
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E KKWV G + Q A RD ++ G
Sbjct: 175 V-----LVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 219
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 220 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 276
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 277 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 324
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 325 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 384
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 385 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 419
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 420 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 478
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 479 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 538
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 539 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 575
>gi|397613523|gb|EJK62266.1| hypothetical protein THAOC_17127, partial [Thalassiosira oceanica]
Length = 558
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 159/264 (60%), Gaps = 26/264 (9%)
Query: 176 VDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQ 235
V L ++LRPHQREGV FM++CV GL + G GCILADDMGLGKTLQS+ L++TLL
Sbjct: 291 VPKALAKWLRPHQREGVSFMYDCVMGLKDFNG-RGCILADDMGLGKTLQSVTLIWTLLQT 349
Query: 236 GFDGKPM--VKKAIIVTPTSLVSNWEAEIKKWVG-GRVQLIALCESTRDDVVSGIDSFTD 292
G K+ I++ P SLV NW+ E KW+G G V+ +AL ES R V ID F
Sbjct: 350 GITANKARTAKRIIVICPCSLVKNWDNEFVKWLGPGTVKTLALAESDRKTVEKNIDCFCK 409
Query: 293 PCSSLQVLIVSYETFRMHSSKFS-CSESCDLLICDEAHRLKNDQTLTN------------ 339
VLI SYET R H + + + CDL++CDEAHRLKN ++ T+
Sbjct: 410 -TKMFNVLIASYETIRAHVGRLTKHKDCCDLMVCDEAHRLKNRESQTSMALNSIPCRRRV 468
Query: 340 -------RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
+NDLEEF+AMV+FTNPGILG FRR I+ GREP A++ ++K ++
Sbjct: 469 LLTGTPMQNDLEEFYAMVDFTNPGILGTQEDFRRKTLCPILRGREPDASDSQRKQMVDLQ 528
Query: 393 SELSAK-VNQFILRRTNALLSNHL 415
+S++ VN FILRR N L + H
Sbjct: 529 KAMSSQTVNHFILRRVNTLNAQHF 552
>gi|40254124|ref|NP_444354.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Mus musculus]
gi|55977469|sp|Q91ZW3.1|SMCA5_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5; AltName:
Full=Sucrose nonfermenting protein 2 homolog;
Short=mSnf2h
gi|16551316|gb|AAL25793.1|AF375046_1 ATP-dependent chromatin remodeling protein SNF2H [Mus musculus]
gi|31419851|gb|AAH53069.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 1051
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 179 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 232
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E KKWV G + Q A RD ++ G
Sbjct: 233 V-----LVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 277
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 278 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 334
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 382
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 383 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 442
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 443 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 477
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 478 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 536
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 537 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 596
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 633
>gi|410956805|ref|XP_003985028.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Felis
catus]
Length = 1052
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 256/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|426246999|ref|XP_004017274.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Ovis aries]
Length = 1052
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|301777862|ref|XP_002924349.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Ailuropoda melanoleuca]
Length = 1052
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 256/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|164655795|ref|XP_001729026.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966]
gi|159102915|gb|EDP41812.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966]
Length = 1053
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 268/544 (49%), Gaps = 75/544 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
++ +Q +G+ ++ L GI+G ILAD+MGLGKTLQ+I+ L L + + P +
Sbjct: 153 MKDYQIQGLNWLIS-----LYHNGING-ILADEMGLGKTLQTISFLGYL--KHYRNTPGL 204
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
++V P S + NW E KWV G +++ L + ++++ + I P + VL+ +
Sbjct: 205 H--LVVVPKSTLDNWVREFHKWVPG-FRIVTL-QGSKEERHALIHERILP-QAFDVLVTT 259
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKN-DQTLTN------------------RNDLE 344
YE S + ++ DEAHR+KN D L+ +N+L
Sbjct: 260 YEMCLREKPTLQ-KLSWEYIVIDEAHRIKNVDSALSQIVRAFTSRSRLLITGTPLQNNLM 318
Query: 345 EFFAMVNFTNPGILGDAAYFRRYYETSIICGREPT------ATEEEKKLGIERSSELSAK 398
E ++++NF P + A F +++ G E + A E + K E ++
Sbjct: 319 ELWSLLNFLLPDVFSSADDFEAWFQRKGDTGAETSKADDADAIEAKPKDDHEDDADRHGS 378
Query: 399 VNQ--------FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHS--KNVKRAI 448
+ Q F+LRR A + L PK V L+ +Q + Y + + V A+
Sbjct: 379 IVQQLHKVLRPFLLRRVKADVEQSLLPKKEINVFVGLSDMQRKWYKSLLEKDIEAVNGAL 438
Query: 449 SEETKQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWT 508
S++ ++++L + L+K CNHP L +D + G P TT
Sbjct: 439 SKKEGKTRLLNIVMQLRKCCNHPYL-FDGAEPGPPYTT---------------------- 475
Query: 509 GGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDG 568
D V SGKM +L +LL +++R R+++ ++ LD+ C R Y Y R+DG
Sbjct: 476 --DEHLVYNSGKMDILDKLLRKMKERGS-RVLIFCQMSRMLDILEDYCLFREYTYCRIDG 532
Query: 569 TTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA 628
++ R ++ +N P ++F+FLL+++AGG G+NL + +VLFD DWNP D QA
Sbjct: 533 SSVHEDRIAAIDEYNRPDSDKFLFLLTTRAGGLGINLTSADVVVLFDSDWNPQADLQAMD 592
Query: 629 RVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDL 688
R R GQKK+VF+YRF++ +IEE++ +R K L +++ Q+ SSA Q EDL
Sbjct: 593 RAHRIGQKKQVFVYRFVTDHSIEERILERAAQKLRLDQLVIQQGRSSSAQQKAGQMKEDL 652
Query: 689 RDLF 692
D+
Sbjct: 653 VDMI 656
>gi|57096815|ref|XP_532676.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Canis lupus familiaris]
Length = 1052
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|355720696|gb|AES07016.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mustela putorius furo]
Length = 1030
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|327273932|ref|XP_003221733.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like [Anolis
carolinensis]
Length = 1036
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 254/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 163 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 216
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW E K+WV G + Q A RD ++ G D
Sbjct: 217 V-----LVPKSTLHNWMNEFKRWVPTLRAVCLIGDKEQRAAFV---RDVLLPGE---WDV 265
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 266 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 317
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E +A++NF P + A F +++T+ G ++KL +ER
Sbjct: 318 LTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLG--------DQKL-VER-- 366
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 367 -LHLVLRPFLLRRIKAEVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLD 425
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 426 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 460
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ RI++ S T+ LD+ C R Y Y RLDG T
Sbjct: 461 LVTNSGKMVVLDKLLPKLKEQ-GSRILIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 519
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ +N +N+P ++FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 520 ERQASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 579
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 580 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 617
>gi|342874224|gb|EGU76265.1| hypothetical protein FOXB_13234 [Fusarium oxysporum Fo5176]
Length = 1421
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 255/547 (46%), Gaps = 93/547 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+ +Q +G+Q+M + LN ILAD+MGLGKT+Q+I+L+ L+ + P
Sbjct: 546 LKEYQVKGLQWMISLYNNNLNG------ILADEMGLGKTIQTISLITYLIERKQQAGPY- 598
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIA-----LCESTRDDVVSGIDSFTDPCSSLQ 298
+++ P S ++NW E ++W +++ + +D + G Q
Sbjct: 599 ---LVIVPLSTLTNWNLEFERWAPSVSRIVYKGPPNARKQQQDKIRQG---------GFQ 646
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT-----------------LTN-- 339
VL+ +YE S + ++I DE HR+KN + LT
Sbjct: 647 VLLTTYEYIIKDRPILSKIKWFHMII-DEGHRMKNSNSKLSFTIQQYYHTRFRLILTGTP 705
Query: 340 -RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSI--ICGREPTA-TEEEKKLGIERSSEL 395
+N+L E +AM+NF P I A F ++ T G++ TEEE+ L I R L
Sbjct: 706 LQNNLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKMELTEEEQILVIRR---L 762
Query: 396 SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS 455
+ F+LRR + LP K +V+ CK + LQS+LY + R + + K
Sbjct: 763 HKVLRPFLLRRLKKDVEKDLPDKTEKVIKCKFSALQSKLYKQMVTHN---RLVVSDGKGG 819
Query: 456 KILA-----YITALKKLCNHPKLIYDTIKS-GNPGTTGFEDCIRFFPPEMFSGRSGSWTG 509
K A I L+KLCNHP ++D +++ NP +
Sbjct: 820 KTGARGLSNMIMQLRKLCNHP-FVFDVVENVMNPLSIS---------------------- 856
Query: 510 GDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 569
D W +GK +L R+L Q T R+++ T +D+ R +R+ YLRLDGT
Sbjct: 857 NDLLW-RTAGKFELLDRILPKY-QATGHRVLMFFQMTAIMDIMEDYLRYKRFEYLRLDGT 914
Query: 570 TSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR 629
T +R L+ FN P F+FLLS++AGG GLNL + ++++D DWNP D QA R
Sbjct: 915 TKSDERSDLLREFNAPDSKYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDR 974
Query: 630 VWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ-------QEQTDSSATQGN 681
R GQK V I R +S+ ++EEK+ +R K + KVIQ +TD A
Sbjct: 975 AHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRT 1034
Query: 682 FLSTEDL 688
L T D+
Sbjct: 1035 LLETADM 1041
>gi|431918301|gb|ELK17528.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pteropus alecto]
Length = 1149
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 179 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 232
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 233 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAF---VRDVLLPG------- 277
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 278 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 334
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 382
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 383 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 442
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 443 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 477
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 478 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 536
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 537 RQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 596
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 633
>gi|444322121|ref|XP_004181716.1| hypothetical protein TBLA_0G02590 [Tetrapisispora blattae CBS 6284]
gi|387514761|emb|CCH62197.1| hypothetical protein TBLA_0G02590 [Tetrapisispora blattae CBS 6284]
Length = 1453
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 252/524 (48%), Gaps = 72/524 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+ +Q G+++M + LN ILAD+MGLGKT+QSI+L+ L D P
Sbjct: 459 LKEYQLRGLEWMVSLYNNSLNG------ILADEMGLGKTIQSISLITHLFEVKKDPGPF- 511
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGG-RVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
+++ P S ++NW E +KW R + + R + I + VL+
Sbjct: 512 ---LVIVPLSTITNWTLEFEKWAPSLRTIIYKGTPNQRRSLQPHIRT-----GDFDVLLT 563
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQ-----TLTN---------------RND 342
+YE + + +I DE HR+KN Q T+T+ +N+
Sbjct: 564 TYE-YIIKDRALLAKHDWAHMIIDEGHRMKNAQSKLSYTITHYYRTRNRLILTGTPLQNN 622
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSI--ICGREPTATEEEKKLGIERSSELSAKVN 400
L E +A++NF P I A F ++ T G+E EE+ L I R L +
Sbjct: 623 LPELWALLNFVLPKIFNSAKTFDEWFNTPFANTGGQEKLELTEEETLLIIRR--LHKVLR 680
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFI-HSKNVKRAISEETKQSKILA 459
F+LRR + LP K+ +V+ CKL+ LQ +LY + H+ A +E + I
Sbjct: 681 PFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYEQMLKHNALFVGAGTEGATKGGIKG 740
Query: 460 Y---ITALKKLCNHPKLIYDTIKSG-NPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWV 515
I L+K+CNHP ++D ++S NP T R
Sbjct: 741 LNNKIMQLRKICNHP-FVFDEVESVINPSKTNNNLLFR---------------------- 777
Query: 516 ELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKR 575
+SGK +L R+L L+ + R+++ TQ +D+ R ++ Y+RLDG+T +R
Sbjct: 778 -VSGKFELLDRVLPKLKA-SGHRVLMFFQMTQVMDIMEDFLRMKQLQYMRLDGSTKAEER 835
Query: 576 QKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 635
+++N FN P+ F FLLS++AGG GLNL + +++FD DWNP D QA R R GQ
Sbjct: 836 TEMLNDFNAPNSEYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ 895
Query: 636 KKRVFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSAT 678
K V I R ++T ++EE + +R M K + KVIQ + D+ +T
Sbjct: 896 KNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKST 939
>gi|14028669|gb|AAK52454.1|AF325921_1 DNA-dependent ATPase SNF2H [Mus musculus]
Length = 1051
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 179 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 232
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 233 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 277
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 278 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSNLSEIVREFKTTNRLLL 334
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNSLG--------DQKL-VER--- 382
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 383 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 442
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 443 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 477
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L++++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 478 VTNSGKMVVLDKLLPKLKEQSS-RVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 536
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 537 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 596
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 633
>gi|395834498|ref|XP_003790238.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Otolemur
garnettii]
Length = 1052
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|149698191|ref|XP_001502076.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Equus
caballus]
Length = 1052
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|348582546|ref|XP_003477037.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Cavia
porcellus]
Length = 1051
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 256/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 179 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 232
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E+K+WV G + Q A RD ++ G D
Sbjct: 233 V-----LVPKSTLHNWMSELKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 281
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 282 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 333
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 334 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 382
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 383 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 441
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 442 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 476
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 477 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 535
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 536 ERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 595
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 596 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 633
>gi|335293809|ref|XP_003129222.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sus scrofa]
Length = 1052
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 256/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|384250118|gb|EIE23598.1| hypothetical protein COCSUDRAFT_47361 [Coccomyxa subellipsoidea
C-169]
Length = 1246
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 257/522 (49%), Gaps = 78/522 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q EG+ ++ S + N + CILAD+MGLGKT+Q ++ + Y L Q G +
Sbjct: 126 LRDYQLEGLNWLI--YSWMQN----NNCILADEMGLGKTIQCVSFIGYLSLWQQIAGPYL 179
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSS----LQ 298
V V P S V NW E +KW+ L+ + +S +V+ + +T S
Sbjct: 180 V-----VVPLSTVPNWIREFRKWLPQCNALVYVGDSKSREVIRAFEFYTGKRSGRMYKFD 234
Query: 299 VLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR------------------ 340
VLI ++E ++ S L+ DEAHRLKN+++ R
Sbjct: 235 VLITTFELVLKDAAVLS-EIKWSYLVVDEAHRLKNNESALYRELATWQFKNKLLVTGTPL 293
Query: 341 -NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKV 399
N ++E +A+++F P +A F A KK E ++L ++
Sbjct: 294 QNSMKELWALLHFLEPSKFPNAEDF--------------DARHSLKK--AEELTQLHTEL 337
Query: 400 NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK---QSK 456
+LRR + LPPK ++ ++PLQ + Y +I ++N K +++ TK Q
Sbjct: 338 RPHLLRRVIKDVEKSLPPKNERILRVAMSPLQKQYYK-WILTRNFKE-LNKGTKGGGQIS 395
Query: 457 ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVE 516
+L IT LKK CNHP ++++ +S F G + D V
Sbjct: 396 LLNIITELKKCCNHP-FLFESAESD------------------FRGSNDDSKAVDRLTVS 436
Query: 517 LSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 576
+GKM +L +L+ L++ T R+++ S + LD+ + R R + + RLDG+T ++R
Sbjct: 437 -AGKMVLLDKLMRRLKE-TGHRVLIFSQMVRMLDIISDYMRLRGFQHQRLDGSTPAAQRH 494
Query: 577 KLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 636
+ + HFN P +F FLLS++AGG G+NL + +++FD DWNP ND QA +R R GQ
Sbjct: 495 QAMEHFNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQT 554
Query: 637 KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSAT 678
+ V IYRFL++G++EE + +R K L ++ Q S T
Sbjct: 555 ETVNIYRFLTSGSVEEDILERAKQKMVLDHLVIQRMDTSGRT 596
>gi|384485216|gb|EIE77396.1| hypothetical protein RO3G_02100 [Rhizopus delemar RA 99-880]
Length = 1147
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 242/522 (46%), Gaps = 67/522 (12%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMV 243
L+ +Q +G+Q+M + LN ILAD+MGLGKT+Q+I+L+ L+ + P
Sbjct: 520 LKEYQVKGLQWMVSLYNNRLNG------ILADEMGLGKTIQTISLITYLIERKKQNGPF- 572
Query: 244 KKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVS 303
+I+ P S ++NW E +KW +I + DV I QVLI +
Sbjct: 573 ---LIIVPLSTLTNWALEFEKWAPS---VITVVYKGPPDVRKDIQKRQIKHRDFQVLITT 626
Query: 304 YETFRMHSSKFSCSESCDLLICDEAHRLKNDQ---TLTNR-----------------NDL 343
++ + + C +I DE HR+KN Q TL R N+L
Sbjct: 627 FD-YIIKDRPVLCKIKWQYMIIDEGHRMKNTQSKLTLVLRQYYSARYRLILTGTPLQNNL 685
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSII---CGREPTATEEEKKLGIERSSELSAKVN 400
E +A++NF P I F ++ T + EEE+ L I+R L +
Sbjct: 686 PELWALLNFILPKIFNSVKSFEEWFNTPFNNQGVQDKVELNEEEQLLIIKR---LHKVLR 742
Query: 401 QFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQS--KIL 458
F+LRR + + LP K+ ++ CKL+ LQ +LY + + S K S +
Sbjct: 743 PFLLRRLKKDVESELPDKVETIIKCKLSALQLKLYYQMKKYGILYGSNSNNGKTSIKGLN 802
Query: 459 AYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELS 518
I L+K+CNHP + FE+ R P S +S
Sbjct: 803 NTIMQLRKICNHPFV--------------FEEVERVVNPYKLSNE---------LLYRVS 839
Query: 519 GKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKL 578
GK +L R+L LR T R+++ TQ +D+ C R + +LRLDG+T R L
Sbjct: 840 GKFDLLDRILPKLRA-TGHRVLIFFQMTQIMDIMEDFCIYRGFRHLRLDGSTKSDDRSNL 898
Query: 579 VNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKR 638
+ FN P F+FLLS++AGG GLNL + +++FD DWNP D QA R R GQ K
Sbjct: 899 LKQFNAPDSPYFIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKE 958
Query: 639 VFIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQTDSSATQ 679
V I+R ++ +IEE + R K + KVIQ + D +T+
Sbjct: 959 VRIFRLITEDSIEENILARAQYKLDIDGKVIQAGKFDHRSTE 1000
>gi|344291654|ref|XP_003417549.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Loxodonta
africana]
Length = 1052
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 251/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ+ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|348524410|ref|XP_003449716.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Oreochromis
niloticus]
Length = 1036
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 252/509 (49%), Gaps = 75/509 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
+R +Q G+ ++ L GI+G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 163 MRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTIALLGYMKHYRNIPGPHM 216
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLI 301
V + P S + NW E K+WV L A+C RD+ + I P V +
Sbjct: 217 V-----LVPKSTLYNWMNEFKRWVPS---LRAVCLIGDRDERTALIRDVLLP-GEWDVCV 267
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------ND 342
SYE + + F + L+ DEAHR+KN+++ TNR N+
Sbjct: 268 TSYEMLIIEKAVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 326
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + + F +++T+ G ++KL +ER L + F
Sbjct: 327 LHELWALLNFLLPDVFNSSEDFDSWFDTNNCLG--------DQKL-VER---LHTVLRPF 374
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
+LRR A + L PK + L+ +Q E Y + + + + ++L +
Sbjct: 375 LLRRIKADVEKTLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLM 434
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L +D + G P TT + SGKM
Sbjct: 435 QLRKCCNHPYL-FDGAEPGPPYTTDIHLAVN------------------------SGKMV 469
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +RQ +N F
Sbjct: 470 VLDKLLPKLKEQ-GSRVLIFSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQISINAF 528
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N+P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQ+K+V ++
Sbjct: 529 NEPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVF 588
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
RF++ T+EE++ +R K L ++ Q+
Sbjct: 589 RFITENTVEERIVERAEMKLRLDSIVIQQ 617
>gi|24666729|ref|NP_649111.1| Chd3 [Drosophila melanogaster]
gi|25089877|sp|O16102.3|CHD3_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 3; AltName:
Full=ATP-dependent helicase Chd3
gi|23093148|gb|AAF49162.2| Chd3 [Drosophila melanogaster]
Length = 892
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 272/570 (47%), Gaps = 94/570 (16%)
Query: 184 LRPHQREGVQFM-FECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPM 242
L P Q EGV ++ + G+ ILAD+MGLGKT+Q++ LY+L +G P
Sbjct: 267 LHPFQIEGVSWLRYSWGQGI-------PTILADEMGLGKTIQTVVFLYSLFKEGHCRGPF 319
Query: 243 VKKAIIVTPTSLVSNWEAEIKKW---------VGGRVQ--LIALCESTRDDVVSGIDSFT 291
+I P S ++NWE E++ W VGG+ +I E + ++V +
Sbjct: 320 ----LISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMREN 375
Query: 292 DPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNR----------- 340
V++ SYE + ++ C + L++ DEAHRL+++Q+ R
Sbjct: 376 QTQYKFNVMLTSYEFISVDAAFLGCIDWAALVV-DEAHRLRSNQSKFFRILSKYRIGYKL 434
Query: 341 --------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERS 392
N+LEE F ++NF + G D F+ + T+ K+ ++R
Sbjct: 435 LLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEF------------TDVSKEEQVKRL 482
Query: 393 SELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEET 452
E+ + +LRR A + +PPK +V +L+ +Q + Y H + +KN K A++++
Sbjct: 483 HEI---LEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHIL-TKNFK-ALNQKG 537
Query: 453 --KQSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGG 510
+ +L + L+K CNHP L + +G +
Sbjct: 538 GGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEM------------------- 578
Query: 511 DGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTT 570
+ + SGK+ +L+++L L+ + R++L S T+ L++ Y Y R+DG+
Sbjct: 579 -SSLTKASGKLDLLSKMLKQLKA-DNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSI 636
Query: 571 SISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARV 630
RQK ++ FNDP FVFLLS++AGG G+NL + +++FD DWNP ND QA +R
Sbjct: 637 KGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRA 696
Query: 631 WRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRD 690
R GQKK+V IYRF++ ++EE++ Q K L ++ + T NF S ++L D
Sbjct: 697 HRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTT--NF-SKDELED 753
Query: 691 LFTF--HDDVRSEIHENMHCTRCQNYDDGA 718
+ F D + E +H YDD A
Sbjct: 754 ILRFGTEDLFKDGKSEAIH------YDDKA 777
>gi|119613043|gb|EAW92637.1| RAD26L hypothetical protein, isoform CRA_c [Homo sapiens]
Length = 672
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/545 (29%), Positives = 258/545 (47%), Gaps = 100/545 (18%)
Query: 166 NDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAGIHG--CILADDMGLGKTL 223
+D G+ +P T++ R+LR +QREG +F++ IHG CIL DDMGLGKT+
Sbjct: 109 SDNGDSIPYTIN----RYLRDYQREGTRFLY--------GHYIHGGGCILGDDMGLGKTV 156
Query: 224 QSIALLYTLL-----------------CQGFDGKPMVKKA----IIVTPTSLVSNWEAEI 262
Q I+ L +L + +P+ A +IV P S++ NW+ E+
Sbjct: 157 QVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDEL 216
Query: 263 KKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDL 322
W G ++ L + +D+ + + ++ + +YET R+ + + E
Sbjct: 217 DTW--GYFRVTVLHGNRKDNELIRVKQ-----RKCEIALTTYETLRLCLDELNSLEW-SA 268
Query: 323 LICDEAHRLKNDQTLTN-------------------RNDLEEFFAMVNFTNPGILGDAAY 363
+I DEAHR+KN + +N+++E + ++++ PG+LG Y
Sbjct: 269 VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTY 328
Query: 364 FRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVV 423
F++ + + G+ TAT+ E G + L+ K++ + LRRT L+ + LP K +V
Sbjct: 329 FKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMV 388
Query: 424 CCKLTPLQSELYNHFIHSKNVKRAISE-----------------------ETKQSKILAY 460
C LT Q +Y + +++V + ET ++ L+Y
Sbjct: 389 YCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKTLYLSY 448
Query: 461 ITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFP--PEMFSGRSGSWTGGDGAWVEL- 517
+T L+K+ NH L+ S T C + F P+ D A+ L
Sbjct: 449 LTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPDFVQ------KSKDAAFETLS 502
Query: 518 ----SGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
SGKM VL +LL H R + D+++L S T+ LD+ Q C Y RLDG+T
Sbjct: 503 DPKYSGKMKVLQQLLNHCR-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSE 561
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+R K+V FN +++ + L+S+ AGG GLN +G N +VLFDP WNPAND QA R
Sbjct: 562 ERLKIVKEFNS-TQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRTQTH 620
Query: 634 GQKKR 638
+++R
Sbjct: 621 CRRER 625
>gi|363733106|ref|XP_001234486.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Gallus
gallus]
Length = 1001
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 249/509 (48%), Gaps = 75/509 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 128 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 181
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLI 301
V + P S + NW E K+WV L A+C +D + + P V +
Sbjct: 182 V-----LVPKSTLHNWMNEFKRWVPT---LRAVCLIGDKDQRAAFVRDVLLP-GEWDVCV 232
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------ND 342
SYE S F + L+ DEAHR+KN+++ TNR N+
Sbjct: 233 TSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 291
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + + F +++T+ G ++KL +ER L + F
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDSWFDTNNCLG--------DQKL-VER---LHMVLRPF 339
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
+LRR A + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 340 LLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILM 399
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 400 QLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHLVTNSGKMV 434
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +RQ +N +
Sbjct: 435 VLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAY 493
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N+P ++FVF+LS++AGG G+NL + ++L+D DWNP D QA R R GQ K V ++
Sbjct: 494 NEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVF 553
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
RF++ T+EE++ +R K L ++ Q+
Sbjct: 554 RFITDNTVEERIVERAEMKLRLDSIVIQQ 582
>gi|115491355|ref|XP_001210305.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
gi|114197165|gb|EAU38865.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
Length = 1459
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 255/534 (47%), Gaps = 77/534 (14%)
Query: 173 PITVDPLLVR--FLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLY 230
PI P V+ L+ Q +GV FM N +LAD+MGLGKT+Q++A +
Sbjct: 425 PIKGTPTFVQNGELKEFQVKGVNFM------AFNWVKNRNVVLADEMGLGKTVQTVAFIS 478
Query: 231 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSF 290
L P V +V P S + +W W ++ +V+ +
Sbjct: 479 WLRHVRRQQGPFV----VVVPLSTMPSWADTFDNWTPDLNYIVYNGNEAARNVLREHELM 534
Query: 291 TD---PCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------- 336
D VL+ +YE + SS F + DEAHRLKN ++
Sbjct: 535 IDGNPKRPKFNVLLTTYEYVLLDSS-FLSQFKWQFMAVDEAHRLKNRESQLYQKLLEFRS 593
Query: 337 -----LTN---RNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLG 388
+T +N+L E A+++F NPG++ I + A +KL
Sbjct: 594 PARLLITGTPIQNNLAELSALLDFLNPGLV------------DIDVDMDLNAEAASQKL- 640
Query: 389 IERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAI 448
+EL+ + F+LRRT + + + LPPK +++ +L+ +Q E Y + + +KN A+
Sbjct: 641 ----AELTKAIQPFMLRRTKSKVESDLPPKTEKIIRVELSDIQLEYYKNIL-TKNYA-AL 694
Query: 449 SEETKQSK--ILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGS 506
+E TK K +L + LKK NHP + + G+T ED +R
Sbjct: 695 NEGTKGQKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDILR------------- 741
Query: 507 WTGGDGAWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL 566
A + SGKM +L +LL L+ R R+++ S + LDL + R Y Y RL
Sbjct: 742 ------AMITSSGKMMLLDQLLAKLK-RDGHRVLIFSQMVKMLDLLGEYMEFRGYQYQRL 794
Query: 567 DGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 626
DGT + + R+ + HFN P ++F F+LS++AGG G+NL+ + +VLFD DWNP D QA
Sbjct: 795 DGTIAAASRRLAIEHFNAPGSSDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQA 854
Query: 627 AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV-IQQEQTDSSATQ 679
AR R GQ K V +YR +S T+EE+V +R +K L+ + IQ+ TD A++
Sbjct: 855 MARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASE 908
>gi|326918376|ref|XP_003205465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Meleagris gallopavo]
Length = 1020
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 249/509 (48%), Gaps = 75/509 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 147 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 200
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLI 301
V + P S + NW E K+WV L A+C +D + + P V +
Sbjct: 201 V-----LVPKSTLHNWMNEFKRWVPT---LRAVCLIGDKDQRAAFVRDVLLP-GEWDVCV 251
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------ND 342
SYE S F + L+ DEAHR+KN+++ TNR N+
Sbjct: 252 TSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 310
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + + F +++T+ G ++KL +ER L + F
Sbjct: 311 LHELWALLNFLLPDVFNSSEDFDSWFDTNNCLG--------DQKL-VER---LHMVLRPF 358
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
+LRR A + LPPK + L+ +Q E Y + + + + ++L +
Sbjct: 359 LLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILM 418
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 419 QLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHLVTNSGKMV 453
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +RQ +N +
Sbjct: 454 VLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAY 512
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N+P ++FVF+LS++AGG G+NL + ++L+D DWNP D QA R R GQ K V ++
Sbjct: 513 NEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVF 572
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
RF++ T+EE++ +R K L ++ Q+
Sbjct: 573 RFITDNTVEERIVERAEMKLRLDSIVIQQ 601
>gi|11035016|gb|AAG01537.2|AF292095_1 imitation switch ISWI [Xenopus laevis]
Length = 1046
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 248/509 (48%), Gaps = 75/509 (14%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 173 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRSIPGPHM 226
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCE-STRDDVVSGIDSFTDPCSSLQVLI 301
V + P S + NW AE K+WV L A+C +D + + P V +
Sbjct: 227 V-----LVPKSTLHNWMAEFKRWVPS---LCAVCLIGDKDHRAAFVRDVLLP-GEWDVCV 277
Query: 302 VSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR---------ND 342
SYE S F + L+ DEAHR+KN+++ TNR N+
Sbjct: 278 TSYEMLIREKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 336
Query: 343 LEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQF 402
L E +A++NF P + + F +++T+ G ++KL +ER L + F
Sbjct: 337 LHELWALLNFLLPDVFNSSEDFDSWFDTNNCLG--------DQKL-VER---LHMVLKPF 384
Query: 403 ILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYIT 462
+LRR A + L PK + L+ +Q E Y + S +T + ++L +
Sbjct: 385 LLRRIKADVEKSLKPKKEIKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILM 444
Query: 463 ALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMH 522
L+K CNHP L +D + G P TT D SGKM
Sbjct: 445 QLRKCCNHPYL-FDGAEPGPPYTT------------------------DLHLATNSGKMM 479
Query: 523 VLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHF 582
VL +LL L+++ D RI++ S T+ LD+ C R Y Y RLDG T +RQ+ + +
Sbjct: 480 VLDKLLPKLKEQ-DSRILIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQESIIAY 538
Query: 583 NDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIY 642
N P +F+F+LS++AGG G+NL + ++++D DWNP D QA R R GQ K V ++
Sbjct: 539 NAPGSTKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVF 598
Query: 643 RFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
RF++ T+EE++ +R K L ++ Q+
Sbjct: 599 RFITDNTVEERIVERAEMKLRLDSIVIQQ 627
>gi|388453347|ref|NP_001253253.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|332217318|ref|XP_003257807.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Nomascus
leucogenys]
gi|402870539|ref|XP_003899273.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Papio
anubis]
gi|355687630|gb|EHH26214.1| hypothetical protein EGK_16126 [Macaca mulatta]
gi|380783625|gb|AFE63688.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|383408717|gb|AFH27572.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|384941584|gb|AFI34397.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
Length = 1052
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|297674406|ref|XP_002815220.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like,
partial [Pongo abelii]
Length = 816
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|296195484|ref|XP_002745366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Callithrix jacchus]
Length = 1052
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 278
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 279 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 335
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 383
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 444 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 478
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 479 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 537
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 538 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 597
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 598 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|116283949|gb|AAH16071.1| Smarca1 protein [Mus musculus]
Length = 1032
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/572 (30%), Positives = 267/572 (46%), Gaps = 80/572 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L G++G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 187 LRDYQIRGLNWLIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 240
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L +C DV + V +
Sbjct: 241 V-----LVPKSTLHNWMNEFKRWVPS---LRVICFVGDKDVRAAFIRDEMMPGEWDVCVT 292
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---------NDL 343
SYE S F L+ DEAHR+KN+++ TNR N+L
Sbjct: 293 SYEMVIKEKSVFK-KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNL 351
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 352 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 399
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR + LPPK + L+ +Q E Y + S + + ++L +
Sbjct: 400 LRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQ 459
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 460 LRKCCNHPYL-FDGAEPGPPYTT------------------------DEHIVGNSGKMVA 494
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL ++++ R+++ S T+ LD+ C R Y Y RLDG T +R++ ++ FN
Sbjct: 495 LDKLLARIKEQ-GSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN 553
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 554 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 613
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
++ T+EE++ +R K L ++ Q Q Q N L+ E++ + +R
Sbjct: 614 LITDNTVEERIVERAEIKLRLDSIVIQ-QGRLIDQQSNKLAKEEMLQM------IRHGAT 666
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
C + D+ +I E E +A N++
Sbjct: 667 HVFACKESELTDEDIVTILERGEKKTAEMNER 698
>gi|157817975|ref|NP_001100889.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Rattus norvegicus]
gi|149037939|gb|EDL92299.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 995
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 123 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 176
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 177 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 221
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 222 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 278
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 279 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 326
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 327 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 386
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 387 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 421
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 422 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 480
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 481 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 540
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 541 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 577
>gi|325651836|ref|NP_003592.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Homo sapiens]
gi|57014128|sp|O60264.1|SMCA5_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5;
Short=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin A5; AltName: Full=Sucrose
nonfermenting protein 2 homolog; Short=hSNF2H
gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens]
gi|18606276|gb|AAH23144.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|119625476|gb|EAX05071.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|168275690|dbj|BAG10565.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [synthetic construct]
gi|325463895|gb|ADZ15718.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [synthetic construct]
Length = 1052
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 255/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|397500075|ref|XP_003820752.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Pan
paniscus]
Length = 1052
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 255/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|410223740|gb|JAA09089.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
gi|410267210|gb|JAA21571.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
Length = 1052
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 255/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|262050608|ref|NP_444353.3| probable global transcription activator SNF2L1 [Mus musculus]
gi|81911462|sp|Q6PGB8.1|SMCA1_MOUSE RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=DNA-dependent ATPase SNF2L; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus]
Length = 1046
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/572 (30%), Positives = 267/572 (46%), Gaps = 80/572 (13%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L G++G ILAD+MGLGKTLQ+IALL Y + G M
Sbjct: 187 LRDYQIRGLNWLIS-----LYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 240
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIV 302
V + P S + NW E K+WV L +C DV + V +
Sbjct: 241 V-----LVPKSTLHNWMNEFKRWVPS---LRVICFVGDKDVRAAFIRDEMMPGEWDVCVT 292
Query: 303 SYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTL----------TNR---------NDL 343
SYE S F L+ DEAHR+KN+++ TNR N+L
Sbjct: 293 SYEMVIKEKSVFK-KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNL 351
Query: 344 EEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQFI 403
E +A++NF P + A F +++T G ++KL +ER L A + F+
Sbjct: 352 HELWALLNFLLPDVFNSADDFDSWFDTKNCLG--------DQKL-VER---LHAVLKPFL 399
Query: 404 LRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYITA 463
LRR + LPPK + L+ +Q E Y + S + + ++L +
Sbjct: 400 LRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQ 459
Query: 464 LKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKMHV 523
L+K CNHP L +D + G P TT D V SGKM
Sbjct: 460 LRKCCNHPYL-FDGAEPGPPYTT------------------------DEHIVGNSGKMVA 494
Query: 524 LARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFN 583
L +LL ++++ R+++ S T+ LD+ C R Y Y RLDG T +R++ ++ FN
Sbjct: 495 LDKLLARIKEQ-GSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN 553
Query: 584 DPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR 643
P+ ++F+F+LS++AGG G+NL + ++L+D DWNP D QA R R GQKK V ++R
Sbjct: 554 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 613
Query: 644 FLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSEIH 703
++ T+EE++ +R K L ++ Q Q Q N L+ E++ + +R
Sbjct: 614 LITDNTVEERIVERAEIKLRLDSIVIQ-QGRLIDQQSNKLAKEEMLQM------IRHGAT 666
Query: 704 ENMHCTRCQNYDDGAESIGEGDETNSANKNDQ 735
C + D+ +I E E +A N++
Sbjct: 667 HVFACKESELTDEDIVTILERGEKKTAEMNER 698
>gi|355749594|gb|EHH53993.1| hypothetical protein EGM_14722 [Macaca fascicularis]
Length = 1052
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 255/518 (49%), Gaps = 93/518 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 180 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G D
Sbjct: 234 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPGE---WDV 282
Query: 294 C-SSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR-- 340
C +S ++LI F+ + ++ L+ DEAHR+KN+++ TNR
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRY--------LVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 341 -------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSS 393
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER-- 383
Query: 394 ELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETK 453
L + F+LRR A + LPPK + L+ +Q E Y + + +
Sbjct: 384 -LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 454 QSKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGA 513
+ ++L + L+K CNHP L +D + G P TT D
Sbjct: 443 KMRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMH 477
Query: 514 WVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIS 573
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T
Sbjct: 478 LVTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 574 KRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 633
+RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R
Sbjct: 537 ERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 634 GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
GQ K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 634
>gi|354488354|ref|XP_003506335.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Cricetulus griseus]
Length = 1042
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 170 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 223
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 224 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 268
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 269 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 325
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 326 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 373
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 374 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 433
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 434 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 468
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 469 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 527
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 528 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 587
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 588 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 624
>gi|351713893|gb|EHB16812.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5, partial [Heterocephalus
glaber]
Length = 993
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 121 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 174
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 175 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 219
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 220 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 276
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 277 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 324
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 325 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 384
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 385 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 419
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 420 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 478
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 479 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 538
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 539 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 575
>gi|291401180|ref|XP_002716976.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a5-like [Oryctolagus cuniculus]
Length = 1051
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 91/517 (17%)
Query: 184 LRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALL-YTLLCQGFDGKPM 242
LR +Q G+ ++ L GI+G ILAD+MGLGKTLQ+I+LL Y + G M
Sbjct: 179 LRDYQVRGLNWLIS-----LYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 232
Query: 243 VKKAIIVTPTSLVSNWEAEIKKWV---------GGRVQLIALCESTRDDVVSGIDSFTDP 293
V + P S + NW +E K+WV G + Q A RD ++ G
Sbjct: 233 V-----LVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV---RDVLLPG------- 277
Query: 294 CSSLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQT----------LTNR--- 340
V + SYE S F + L+ DEAHR+KN+++ TNR
Sbjct: 278 --EWDVCVTSYEMLIKEKSVFK-KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL 334
Query: 341 ------NDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSE 394
N+L E ++++NF P + A F +++T+ G ++KL +ER
Sbjct: 335 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DQKL-VER--- 382
Query: 395 LSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQ 454
L + F+LRR A + LPPK + L+ +Q E Y + + + +
Sbjct: 383 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 442
Query: 455 SKILAYITALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAW 514
++L + L+K CNHP L +D + G P TT D
Sbjct: 443 MRLLNILMQLRKCCNHPYL-FDGAEPGPPYTT------------------------DMHL 477
Query: 515 VELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISK 574
V SGKM VL +LL L+++ R+++ S T+ LD+ C R Y Y RLDG T +
Sbjct: 478 VTNSGKMVVLDKLLPKLKEQ-GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 536
Query: 575 RQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDG 634
RQ +N +N+P+ +FVF+LS++AGG G+NL + ++L+D DWNP D QA R R G
Sbjct: 537 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG 596
Query: 635 QKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQE 671
Q K V ++RF++ T+EE++ +R K L ++ Q+
Sbjct: 597 QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQ 633
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,978,074,314
Number of Sequences: 23463169
Number of extensions: 656531399
Number of successful extensions: 2648039
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13169
Number of HSP's successfully gapped in prelim test: 2951
Number of HSP's that attempted gapping in prelim test: 2523244
Number of HSP's gapped (non-prelim): 73388
length of query: 911
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 759
effective length of database: 8,792,793,679
effective search space: 6673730402361
effective search space used: 6673730402361
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)