BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043997
(222 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147828362|emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
Length = 972
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 146/186 (78%), Gaps = 23/186 (12%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
TSEG F+QPAIPRF GHYDHWSMLM+NF+RSKEYW LVETGYDEP + + + +A QK D
Sbjct: 4 TSEGXFAQPAIPRFDGHYDHWSMLMENFLRSKEYWSLVETGYDEPQANAAMTEAQQKRLD 63
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
E+KLKDLKVKNYLFQAIDRTIL+TI +K+T+K+IWD+MKKK+EGNARVK+S LQALRR+F
Sbjct: 64 EMKLKDLKVKNYLFQAIDRTILETILQKNTSKQIWDSMKKKYEGNARVKRSILQALRRDF 123
Query: 122 ETLEMKS---------------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESK 158
ET+EMKS GE+ +V IVEKILR LT+ FN IVCSIEESK
Sbjct: 124 ETVEMKSSECITDYFSRVMSVSNKMRFHGEQMLEVTIVEKILRXLTDNFNYIVCSIEESK 183
Query: 159 DIDSLS 164
D D+L+
Sbjct: 184 DTDTLT 189
>gi|147821826|emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
Length = 1246
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 142/186 (76%), Gaps = 23/186 (12%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
TSEG F+QPAIP F GHYDHWSMLM+NF+RSKEYW LVETGYDEP + + + A QK D
Sbjct: 4 TSEGQFAQPAIPCFNGHYDHWSMLMENFLRSKEYWSLVETGYDEPQANAAMTKAQQKRLD 63
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
E+KLKDLKVKNY+FQAIDRTIL+TI +K+T+K+IWD+MKKK+E NARVK+S LQ LRR+F
Sbjct: 64 EMKLKDLKVKNYMFQAIDRTILETILQKNTSKQIWDSMKKKYEENARVKRSILQTLRRDF 123
Query: 122 ETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESK 158
ETLEMKSGE +V IVEKILR+LT+ FN IVCSIEESK
Sbjct: 124 ETLEMKSGECITDYFSRVMSVSNKMRFHGEQIREVTIVEKILRSLTDNFNYIVCSIEESK 183
Query: 159 DIDSLS 164
D D+L+
Sbjct: 184 DTDTLT 189
>gi|147859212|emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 135/187 (72%), Gaps = 23/187 (12%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M E +F QPAIPRF GHYDHWSMLM+NF+RSKEYW LVETG A G L DA +K
Sbjct: 1 MAFENSFVQPAIPRFDGHYDHWSMLMENFLRSKEYWNLVETGITAAAEGIDLSDAQKKAL 60
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
++ KLKDLK KNYLFQAIDR+IL+TI KKDTAK+IWD++K+K++G ARVK +QLQALR+E
Sbjct: 61 EDQKLKDLKAKNYLFQAIDRSILETILKKDTAKDIWDSLKQKYQGTARVKHAQLQALRKE 120
Query: 121 FETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEES 157
FE L MK+GE DV I+EKILR++T K++ +VCSIEES
Sbjct: 121 FEVLHMKTGESVNDYFGRTLIIANKMRTHGERMVDVVIIEKILRSMTSKYDYVVCSIEES 180
Query: 158 KDIDSLS 164
D+D+LS
Sbjct: 181 NDLDTLS 187
>gi|147801787|emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
Length = 1278
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 133/187 (71%), Gaps = 24/187 (12%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M SE NF QPAIPRF GHYD+WSMLM+NF+RSKEYW +V G EPA+ S + DA +
Sbjct: 1 MASE-NFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEI 59
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+ +LKDLK KNYLFQAIDR+IL+TI KDT+++IWD+MKKK++G+ R K+ QLQALR E
Sbjct: 60 EGQRLKDLKAKNYLFQAIDRSILETILCKDTSQQIWDSMKKKYQGSMRTKRQQLQALRSE 119
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
FETL MK GE EDV ++EKILR++T KFN +VCSIEES
Sbjct: 120 FETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILRSMTPKFNYVVCSIEES 179
Query: 158 KDIDSLS 164
KD+D LS
Sbjct: 180 KDLDELS 186
>gi|147820839|emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 133/185 (71%), Gaps = 23/185 (12%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
+E +F QP +P+F GHYDHW+MLM+NF+RSKEYWGLVE+G A G VL DA +K D+
Sbjct: 2 AENSFVQPTVPKFDGHYDHWAMLMENFLRSKEYWGLVESGIPTVAEGVVLTDAQRKNIDD 61
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
KLKDLK KNYLFQA+DR++L+TI KDTAK IWD++K+K++G RVK++ LQALR+EFE
Sbjct: 62 QKLKDLKAKNYLFQALDRSVLETILNKDTAKNIWDSLKQKYQGTTRVKRAHLQALRKEFE 121
Query: 123 TLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKD 159
L MK+GE DV +VEKILR++T KF+ +VCSIEESKD
Sbjct: 122 LLHMKAGESVNEYFARTLTIANKMKANGENKGDVVVVEKILRSMTPKFDYVVCSIEESKD 181
Query: 160 IDSLS 164
++L+
Sbjct: 182 TNTLT 186
>gi|147782774|emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
Length = 672
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 128/182 (70%), Gaps = 23/182 (12%)
Query: 6 NFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKL 65
NF QPAIPRF GHYDHWSMLM+NF+RSKEYW +V G EPA+ S + DA + + +L
Sbjct: 5 NFVQPAIPRFDGHYDHWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEIEGQRL 64
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
KDLK KNYLFQAIDR+IL+TI KDT+++IWD+MKKK+ G+ R K+ QLQALR EFE L
Sbjct: 65 KDLKAKNYLFQAIDRSILETILCKDTSQQIWDSMKKKYLGSTRTKRQQLQALRFEFEMLR 124
Query: 126 MKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDS 162
MK GE EDV ++EKILR++T KFN +VCSIEESKD+D
Sbjct: 125 MKLGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILRSMTPKFNYVVCSIEESKDLDE 184
Query: 163 LS 164
LS
Sbjct: 185 LS 186
>gi|147819474|emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
Length = 1338
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 130/187 (69%), Gaps = 23/187 (12%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M +E NF QPAIP+ HYDHW MLM+NF+RSKEYW L+E G +G L + +K+
Sbjct: 64 MATESNFVQPAIPKLDAHYDHWCMLMENFLRSKEYWNLIEQGIXTAEAGVELTEGQKKVI 123
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+ KLKDLKVKNYLFQAIDR++L+TI KDTAK IWD++K+K++G ARV+++Q QALR+E
Sbjct: 124 ENAKLKDLKVKNYLFQAIDRSVLETILNKDTAKCIWDSLKQKYQGTARVQRAQRQALRKE 183
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
FE L MK GE EDV ++EKILR++T KFN +VCSIEES
Sbjct: 184 FEMLNMKVGESVNEYFARTLTIANKMRVHGQKMEDVVVIEKILRSMTPKFNCVVCSIEES 243
Query: 158 KDIDSLS 164
D+D+LS
Sbjct: 244 NDLDTLS 250
>gi|147841356|emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
Length = 1202
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 129/187 (68%), Gaps = 24/187 (12%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M SE NF QPAIPRF GHYD+WSMLM+NF+RSKEYW +V G EPA+ S + DA +
Sbjct: 1 MASE-NFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEI 59
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+ +LKDLK KN LFQ IDR+IL+TI KDT+++IWD+MKKK++G+ R K+ LQALR E
Sbjct: 60 EGQRLKDLKAKNXLFQXIDRSILETILCKDTSQQIWDSMKKKYQGSTRTKRQXLQALRSE 119
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
FETL MK GE EDV ++EKIL ++T KFN +VCSIEES
Sbjct: 120 FETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILXSMTPKFNYVVCSIEES 179
Query: 158 KDIDSLS 164
KD+D LS
Sbjct: 180 KDLDELS 186
>gi|357499393|ref|XP_003619985.1| Resistance gene analog protein [Medicago truncatula]
gi|355495000|gb|AES76203.1| Resistance gene analog protein [Medicago truncatula]
Length = 510
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
MTSEG+F QPAIPRF HYDH SMLM+NF+RSKEYW LVETGY EP + DA +K
Sbjct: 1 MTSEGSFVQPAIPRFDCHYDHSSMLMENFLRSKEYWSLVETGYAEPEQA--VTDAERKRL 58
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
DELKLKDLK KNYLFQAIDRTIL+TI +K+T+K+IWD+MKKK+EGNARVK+ LQALR+E
Sbjct: 59 DELKLKDLKCKNYLFQAIDRTILETILQKNTSKQIWDSMKKKYEGNARVKRLHLQALRKE 118
Query: 121 FETLEMKSGE 130
FETLEMKSGE
Sbjct: 119 FETLEMKSGE 128
>gi|297744326|emb|CBI37296.3| unnamed protein product [Vitis vinifera]
Length = 3048
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 127/182 (69%), Gaps = 23/182 (12%)
Query: 6 NFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKL 65
+F QPAI +F G+YDHW+MLM+NF+RSKEYWGLV G A +VL DA +K ++ +L
Sbjct: 30 SFVQPAISKFDGYYDHWAMLMENFLRSKEYWGLVVNGVPAVAEDAVLTDAQRKHIEDQQL 89
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
KDLK KNYLFQA+DR+IL+TI K T K+IWD+MK+KF+G RVK+ LQALR+EF+ L
Sbjct: 90 KDLKAKNYLFQALDRSILETILNKKTTKDIWDSMKQKFQGTTRVKRGNLQALRKEFKILH 149
Query: 126 MKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDS 162
MKSGE + +VEKILR++T KF+ +VCSIEESKD+D+
Sbjct: 150 MKSGETVNEYFSRTLAIANKMKVNGEDKGNTAVVEKILRSMTSKFDYVVCSIEESKDLDT 209
Query: 163 LS 164
L+
Sbjct: 210 LT 211
>gi|7076770|emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 124/188 (65%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSV-LMDAHQKM 59
M+S F QPAIPRF G+YD WSM M+NF+RS+E W LVE G G+ + +A +
Sbjct: 1 MSSSEKFVQPAIPRFDGYYDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSA 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLKDLKVKN+LFQAIDR IL+TI K T+K IW++MKKK++G+ +VK++QLQALR+
Sbjct: 61 VEEAKLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRK 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE L MK GE E IV KILR+LT KFN +VCSIEE
Sbjct: 121 EFELLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEE 180
Query: 157 SKDIDSLS 164
S D+ +LS
Sbjct: 181 SNDLSTLS 188
>gi|357457145|ref|XP_003598853.1| hypothetical protein MTR_3g022370 [Medicago truncatula]
gi|355487901|gb|AES69104.1| hypothetical protein MTR_3g022370 [Medicago truncatula]
Length = 435
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 120/187 (64%), Gaps = 25/187 (13%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
MT +F QPAIP+F G Y+HWSMLM+N +RSKEYW L+E G + L K+
Sbjct: 1 MTKSSSFLQPAIPKFDGFYNHWSMLMENLLRSKEYWNLIEYGVIIAPPNATL--EQHKLV 58
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+E KL+DLKVKNYLFQ+IDR+I++ I DT+K+IWD+M++K++G+ +VK++QLQ LRRE
Sbjct: 59 NESKLRDLKVKNYLFQSIDRSIMEKIIVCDTSKDIWDSMRRKYQGSTKVKRAQLQILRRE 118
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
E L MK E E IVEK++ ++T KFN +VCSIEES
Sbjct: 119 LEVLAMKDSESVNDYIGKTLAITNCMTSHGERLEQTIIVEKVMCSMTPKFNYVVCSIEES 178
Query: 158 KDIDSLS 164
D+ LS
Sbjct: 179 NDVTMLS 185
>gi|147866090|emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
Length = 1226
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 105/143 (73%), Gaps = 3/143 (2%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
MT+E +F QP IP+F G+YDHW+MLM+NF+RSKEYWGLV G A VL DA +K
Sbjct: 1 MTTESSFVQPTIPKFDGYYDHWAMLMENFLRSKEYWGLVVNGVPAVAEDVVLXDAQRKHI 60
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
++ +LKDLK KNYLFQA+D +IL+TI K T K+IWD+MK+KF+G RVK+ LQALR+E
Sbjct: 61 EDQQLKDLKAKNYLFQALDCSILETILNKKTTKDIWDSMKQKFQGTTRVKRGNLQALRKE 120
Query: 121 FETLEMKSGEEDVKIVEKILRTL 143
FE L MKSGE + E RTL
Sbjct: 121 FEILHMKSGE---TVNEYFSRTL 140
>gi|358346461|ref|XP_003637286.1| hypothetical protein MTR_080s0034 [Medicago truncatula]
gi|355503221|gb|AES84424.1| hypothetical protein MTR_080s0034 [Medicago truncatula]
Length = 332
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 121/188 (64%), Gaps = 39/188 (20%)
Query: 1 MTSEG-NFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M+SE NF QPAIP+F GHYDHW+MLM+NF+RSKEYW LVE G A G +A +K+
Sbjct: 1 MSSESSNFVQPAIPKFDGHYDHWAMLMENFLRSKEYWHLVEAGIRTIAEGVQSTEAQRKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLKDLKVKNYLFQ+I+R I++TI + G++++K++QLQALR+
Sbjct: 61 IEEQKLKDLKVKNYLFQSIERNIMETILDR---------------GSSKMKRAQLQALRK 105
Query: 120 EFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEE 156
EFE L+MK GE+ V I+EKILR++T +F+ IVCSIEE
Sbjct: 106 EFEVLQMKEGEKVDEYFARTLTIVKKMKIYGENMTQVMILEKILRSMTSRFDYIVCSIEE 165
Query: 157 SKDIDSLS 164
S ++D L+
Sbjct: 166 SNNLDELT 173
>gi|147843841|emb|CAN79446.1| hypothetical protein VITISV_037463 [Vitis vinifera]
Length = 1120
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 132/210 (62%), Gaps = 30/210 (14%)
Query: 9 QPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDL 68
+P +PRF G+YDHW+MLM+NF+RSK+YW +VE A GS+ A +K +E +LKD+
Sbjct: 81 EPTVPRFDGYYDHWAMLMENFLRSKKYWSIVENEIPLIAEGSMPTQAQRKEVEEARLKDM 140
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
K+KNY+FQ+ID+TI+ TI +T+K IWD++++K++G+ RVK++QLQALR+EFE L+MK
Sbjct: 141 KIKNYMFQSIDKTIMKTILDNNTSKSIWDSIRQKYQGSTRVKQAQLQALRKEFEILQMKE 200
Query: 129 GE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDI---- 160
GE ++V IVEKILR++ + + +V SIEES ++
Sbjct: 201 GEKVDEYFAKGLTIANKMKAHEERMGQNV-IVEKILRSMXPRLDYVVYSIEESNNVDMMT 259
Query: 161 -DSLSEEAEVKEDEVKTLLGAEEEEEAGKF 189
D L V E + G +E+A +F
Sbjct: 260 TDELXSSLLVHEQRMNCHSGNARDEQALRF 289
>gi|10177935|dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis thaliana]
Length = 1334
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 115/176 (65%), Gaps = 23/176 (13%)
Query: 12 IPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK 71
IP+F G Y+HW+MLM+N +RSKE+W ++ETG P +L A + E +KD KVK
Sbjct: 9 IPKFDGDYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVK 68
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE- 130
NYLF +ID+TIL TI +K+T+K++W++MK+K++GN RV+ +QLQ LRR FE LEMK GE
Sbjct: 69 NYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGET 128
Query: 131 ----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D K+VEKILRTL EKF +VC+IEES +I L+
Sbjct: 129 ITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELT 184
>gi|12322452|gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
thaliana]
Length = 1334
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 115/176 (65%), Gaps = 23/176 (13%)
Query: 12 IPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK 71
IP+F G Y+HW+MLM+N +RSKE+W ++ETG P +L A + E +KD KVK
Sbjct: 9 IPKFDGDYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVK 68
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE- 130
NYLF +ID+TIL TI +K+T+K++W++MK+K++GN RV+ +QLQ LRR FE LEMK GE
Sbjct: 69 NYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGET 128
Query: 131 ----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D K+VEKILRTL EKF +VC+IEES +I L+
Sbjct: 129 ITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELT 184
>gi|147812529|emb|CAN72768.1| hypothetical protein VITISV_020056 [Vitis vinifera]
Length = 673
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 114/175 (65%), Gaps = 44/175 (25%)
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+KLKDLKVKNYLFQAI+RTILDTI KKDTAK+IW+AMKKKFE NARVK+S LQALRR FE
Sbjct: 1 MKLKDLKVKNYLFQAIERTILDTILKKDTAKDIWEAMKKKFEENARVKRSHLQALRRNFE 60
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
TLEM+SGE +DVK+VEKILR+LTEKFN +VCSIEE KD
Sbjct: 61 TLEMRSGEGVTKYFSRVMKVANKMRIYGEDMQDVKVVEKILRSLTEKFNYVVCSIEELKD 120
Query: 160 IDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSF 214
ID+L+ DE+++LL E+ KF CH +A V+F
Sbjct: 121 IDALN------VDELQSLLIVHEQ----KF-----------QRCHGEEQALKVTF 154
>gi|147790218|emb|CAN67881.1| hypothetical protein VITISV_032294 [Vitis vinifera]
Length = 538
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 103/144 (71%), Gaps = 29/144 (20%)
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+KLKDLKVKNYLFQAID T+L+T KKDTAK+IWDAMKKKFEGNARVK+S LQALRREFE
Sbjct: 1 MKLKDLKVKNYLFQAIDWTVLNTFLKKDTAKDIWDAMKKKFEGNARVKRSHLQALRREFE 60
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
TLEM+SGE +DVK+VEKILR+LTEKFN +VCSIEE KD
Sbjct: 61 TLEMRSGEGVTEYFFRVMTMANKMQIYGEDMQDVKVVEKILRSLTEKFNYVVCSIEELKD 120
Query: 160 IDSLSEEAEVKEDEVKTLLGAEEE 183
ID L+ DE+K+ L E+
Sbjct: 121 IDVLT------IDELKSSLIVHEQ 138
>gi|147798257|emb|CAN69993.1| hypothetical protein VITISV_018605 [Vitis vinifera]
Length = 118
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 86/107 (80%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M SE +F QPAIPRF GHYDHWSML++NF+RSKEYW LVETG A G L DA +K
Sbjct: 1 MASENSFVQPAIPRFDGHYDHWSMLVENFLRSKEYWNLVETGITAAAEGIDLSDAQKKAL 60
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNA 107
++ K+KDLK KNYLFQAIDR+IL+TI KKDTAK+IWD++K+K+ G+
Sbjct: 61 EDHKMKDLKAKNYLFQAIDRSILETILKKDTAKDIWDSLKQKYSGDG 107
>gi|147782385|emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]
Length = 1095
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 95/125 (76%), Gaps = 23/125 (18%)
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+KLKDLKVKNYLFQAIDRTIL+TI +K+T+K+IWD+MKKK+EGNARVK+S LQALRR+FE
Sbjct: 1 MKLKDLKVKNYLFQAIDRTILETILQKNTSKQIWDSMKKKYEGNARVKRSILQALRRDFE 60
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
TLEMKSGE +V IVEKILR+LT+ FN IVCSIEESKD
Sbjct: 61 TLEMKSGECITDYFSRVMSVSNKMRFHGEQMREVTIVEKILRSLTDNFNYIVCSIEESKD 120
Query: 160 IDSLS 164
D+L+
Sbjct: 121 TDTLT 125
>gi|147820329|emb|CAN66914.1| hypothetical protein VITISV_017048 [Vitis vinifera]
Length = 669
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 97/178 (54%), Gaps = 51/178 (28%)
Query: 10 PAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
PAIP F GHYDHWSMLM+ F++SKEYW +V G EP
Sbjct: 28 PAIPHFDGHYDHWSMLMEKFLKSKEYWTIVVFGVAEPT---------------------- 65
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
+ ID +IL+TI KDTAK IWD+MKKK+ G R K+ QLQALR EFE L M SG
Sbjct: 66 ------EDIDHSILETILCKDTAKHIWDSMKKKYXGTTRAKRQQLQALRSEFEMLRMTSG 119
Query: 130 E-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
E E+V IVEKILR+LT FN IVCSIEE+ D+ LS
Sbjct: 120 ELVIDYFSRTIAIVNKIRIHGDKTENVLIVEKILRSLTPNFNFIVCSIEEANDVGLLS 177
>gi|399920231|gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
Length = 1187
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 51/185 (27%)
Query: 4 EGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPAS-GSVLMDAHQKMTDE 62
E NF QPAIPRF G+YDHW+MLM+NF+RSKEYW +VE G A+ G +A +K+ ++
Sbjct: 3 ETNFVQPAIPRFDGYYDHWAMLMENFLRSKEYWHMVEIGIPAAAAEGGEGTEAQRKLRED 62
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
KLKDLK D+M++KF+G+ +VK++QLQ LRREFE
Sbjct: 63 AKLKDLK---------------------------DSMRQKFQGSTKVKRAQLQTLRREFE 95
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
L M+ GE ED+ IVEKILR++T K++ +VCSIEES D
Sbjct: 96 VLGMREGEKVNEYFARTLTVANKMKAHGERMEDLVIVEKILRSMTRKYDYVVCSIEESND 155
Query: 160 IDSLS 164
+ +++
Sbjct: 156 LTTMT 160
>gi|147835404|emb|CAN74442.1| hypothetical protein VITISV_031467 [Vitis vinifera]
Length = 713
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 107/155 (69%), Gaps = 12/155 (7%)
Query: 39 VETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDA 98
V+ +D V +DA +K DE+KLKDLKVKNYLFQAID+T+LDTI KKDTAK+IWDA
Sbjct: 127 VQETFDPLRRYDVKIDAQRKKNDEMKLKDLKVKNYLFQAIDQTVLDTILKKDTAKDIWDA 186
Query: 99 MKKKFEGNARVKKSQ-LQALRREFETLEMK---SGE--EDVKIVEKILRTLTEKFNDIVC 152
MKKKFEGNAR++ + + T+ K GE +DVK+V+KILR+LTEKFN +VC
Sbjct: 187 MKKKFEGNARMRYGEGVTEYFSRVMTVANKMQIYGENMQDVKVVDKILRSLTEKFNYVVC 246
Query: 153 SIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEEAG 187
SIEESKDIDS + DE+++ L E+ G
Sbjct: 247 SIEESKDIDSFT------VDELQSSLIVHEQNFRG 275
>gi|147766170|emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
Length = 1041
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M SE +F QPAIP F GHY+HWSMLM+NF+RSKEYW +V + EP G VL +A +
Sbjct: 1 MASE-SFVQPAIPHFDGHYNHWSMLMENFLRSKEYWIVVVSRVAEPTEGVVLTNAQRTKF 59
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFE 104
+ELKLKDLK KNYLFQAIDR+IL+TI KDT K IWD+MKKK++
Sbjct: 60 EELKLKDLKAKNYLFQAIDRSILETILCKDTTKHIWDSMKKKYQ 103
>gi|147805939|emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
Length = 1084
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 103/182 (56%), Gaps = 27/182 (14%)
Query: 6 NFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKL 65
NF QPAIP+F GHYDHWSMLM+NF+ SKEYW L+E G G QK + KL
Sbjct: 7 NFVQPAIPKFDGHYDHWSMLMENFLXSKEYWSLIENGIPXXXEGIEPTXXQQKAIADHKL 66
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
KDLKVKNYLFQAID I++ I K+T K ++ R +
Sbjct: 67 KDLKVKNYLFQAIDXNIMEXILNKETX-----------------NKMKIHGERMKIHGES 109
Query: 126 MKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEE 185
MK V I+EKILR++T +F+ +VCS+EES D+D+L+ DE+++ L E+
Sbjct: 110 MK----QVVIIEKILRSMTSRFDYVVCSVEESNDLDTLT------IDELQSSLLVHEQRM 159
Query: 186 AG 187
G
Sbjct: 160 NG 161
>gi|147841699|emb|CAN77603.1| hypothetical protein VITISV_006917 [Vitis vinifera]
Length = 343
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 95/179 (53%), Gaps = 66/179 (36%)
Query: 9 QPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDL 68
+ +P+F GHYDHW+MLM+NF+RSKEYWGLVE G PA+
Sbjct: 159 ESVVPKFDGHYDHWAMLMENFLRSKEYWGLVENGI--PAAAE------------------ 198
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
AK IWD++K+K++G RVK++ LQALR+EFE L MK+
Sbjct: 199 -----------------------AKNIWDSLKQKYQGTTRVKRAHLQALRKEFEILHMKA 235
Query: 129 GEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
GE DV +VEKILR++T KF +VCSI++SKDID+L+
Sbjct: 236 GESVNEYFARTLTIANKMKANGDDKGDVAVVEKILRSMTPKFGYVVCSIKKSKDIDTLT 294
>gi|313184280|emb|CBL94144.1| putative copia-type polyprotein [Malus x domestica]
Length = 168
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 94/146 (64%), Gaps = 27/146 (18%)
Query: 42 GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKK 101
G GS + +K DELKLKDLK KNYLFQAIDR+IL+TI KKD IWD++K+
Sbjct: 2 GIAAVVGGSDSSEVQKKTLDELKLKDLKGKNYLFQAIDRSILETILKKD----IWDSLKQ 57
Query: 102 KFEGNARVKKSQLQALRREFETLEMKSGE-----------------------EDVKIVEK 138
K++G A VK++QLQ LR+EFE L MK+GE +DV I+EK
Sbjct: 58 KYQGIAHVKRAQLQTLRKEFEVLHMKNGETINDYFGSTLSITNNMRTHGEKMDDVVIIEK 117
Query: 139 ILRTLTEKFNDIVCSIEESKDIDSLS 164
ILR+ T K++ +VCSI+ES D+D+LS
Sbjct: 118 ILRSTTLKYDYVVCSIKESNDLDTLS 143
>gi|147802049|emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 88/173 (50%), Gaps = 58/173 (33%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M +E NF QPAIP+F GHYDHWSMLM+NF+RSKEYW LVE G A G +A QK
Sbjct: 1 MAAENNFVQPAIPKFDGHYDHWSMLMENFLRSKEYWSLVEIGIPAAAEGVEFTEAQQKSI 60
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+ KLKDLK G+ RVK++QLQALR+E
Sbjct: 61 ADQKLKDLK-----------------------------------GSTRVKRAQLQALRKE 85
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDI 150
FE L+MK GE + V I+EKILR++T +F+ +
Sbjct: 86 FEVLQMKEGESVDAYFARTLIIANKMKIHGENMQQVVIIEKILRSMTSRFDYV 138
>gi|357492633|ref|XP_003616605.1| hypothetical protein MTR_5g082280 [Medicago truncatula]
gi|355517940|gb|AES99563.1| hypothetical protein MTR_5g082280 [Medicago truncatula]
Length = 167
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 44/163 (26%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKD-LKVKNYLFQAIDRTILD 84
M+N RSKEYWGL ET + ++D + VKNYLFQ+IDR+IL+
Sbjct: 1 MENLFRSKEYWGLKET--------------------RITIQDQIPVKNYLFQSIDRSILE 40
Query: 85 TIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------- 130
TI +T+K+IWD+MK K++G+ +VK +QLQA+R +FE L MK GE
Sbjct: 41 TIIVHNTSKDIWDSMKIKYQGSTKVKHAQLQAIRSKFEALAMKEGESINNYFRRTLKIEN 100
Query: 131 ---------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
E++ I EKI R++T +FN +VC+IEES D+ +LS
Sbjct: 101 KMFAHGDRKEEIVIFEKIFRSMTSRFNYVVCTIEESNDVTTLS 143
>gi|147794682|emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 22/205 (10%)
Query: 8 SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
SQP IP F G Y+ WS+ M +S++ W LVE GY P D ++ + K K
Sbjct: 12 SQPTIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYP-------DEEARLKENTK-K 63
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++ QA+ +I I TAKE W +K F+G+++V +LQ+LRR+FETL M
Sbjct: 64 DSKALFFIQQAVHESIFSKIAAATTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHM 123
Query: 127 KSGEE----------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE---AEVKEDE 173
K+GE D +V K+LR+LT KF+ +V +IEESKD+ + S + ++ E
Sbjct: 124 KNGESMQDFFVKNILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHE 183
Query: 174 VKTLLGAEEEEEAGKFAEHWTTSRK 198
V+ E+ EE + + T+ +K
Sbjct: 184 VRLSRTEEKNEEKAFYTKGETSDQK 208
>gi|147776673|emb|CAN70073.1| hypothetical protein VITISV_011917 [Vitis vinifera]
Length = 147
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 71/98 (72%), Gaps = 23/98 (23%)
Query: 90 DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------------- 130
DTAK+IWDAMKKKFEGNARVK+S +QALRR+FETLEM+ GE
Sbjct: 2 DTAKDIWDAMKKKFEGNARVKRSHIQALRRDFETLEMRYGERVTKYFSRVMTVANKMQIY 61
Query: 131 ----EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+DVK+V+KILR+LTEKFN +VCSIEESKDIDS +
Sbjct: 62 GENMQDVKVVDKILRSLTEKFNYVVCSIEESKDIDSFT 99
>gi|147842083|emb|CAN62648.1| hypothetical protein VITISV_013220 [Vitis vinifera]
Length = 452
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 89/141 (63%), Gaps = 19/141 (13%)
Query: 24 MLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTIL 83
MLM+NF+ SK+YWGLVE G A G VL+DA +K D+ KLKDLK KNYLFQA++R+IL
Sbjct: 1 MLMENFLCSKDYWGLVENGIPAAAEGVVLIDAQRKNIDDQKLKDLKTKNYLFQALNRSIL 60
Query: 84 DTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTL 143
+T+ + E + AR L R E K DV IVEKILR++
Sbjct: 61 ETV--GEFVNEYF----------ART----LTIANRMKANCENKG---DVAIVEKILRSM 101
Query: 144 TEKFNDIVCSIEESKDIDSLS 164
T KF+ +VCSIEESKDID+L+
Sbjct: 102 TPKFDYVVCSIEESKDIDTLT 122
>gi|147807473|emb|CAN66190.1| hypothetical protein VITISV_006048 [Vitis vinifera]
Length = 916
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 90/136 (66%), Gaps = 11/136 (8%)
Query: 33 KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTA 92
K GLVE G PA+ L DA +K ++ KLKDLK NYLFQAIDR++L TI KDT
Sbjct: 24 KRVLGLVENGI--PAAAEGLTDAQRKNIEDQKLKDLKAXNYLFQAIDRSVLXTILNKDTT 81
Query: 93 KEIWDAMKKKFEGNARVKKSQLQALRREFETL-EMKSGEED---VKIVEKILRTLTEKFN 148
K IWD++K+K++G +S + R +MK+ +D V +VEKILR++T KF+
Sbjct: 82 KNIWDSLKQKYQG-----ESVNEYFARXLTIANKMKANGDDKGBVXVVEKILRSMTPKFD 136
Query: 149 DIVCSIEESKDIDSLS 164
+VCSIEESKDID+L+
Sbjct: 137 YVVCSIEESKDIDTLT 152
>gi|147789988|emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 97/181 (53%), Gaps = 32/181 (17%)
Query: 8 SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
SQPAIP F G Y+ WS+ M +S++ W LVE GY P D ++ + K K
Sbjct: 12 SQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYP-------DEEARLKENTK-K 63
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++ QA+ +I I TAKE W +K F+G+++V +LQ+LRR+FETL M
Sbjct: 64 DSKALFFIQQAVHESIFSKIAAXTTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHM 123
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K+GE D +V K+LR+LT KF+ +V +IEESKD+ +
Sbjct: 124 KNGESVQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTY 183
Query: 164 S 164
S
Sbjct: 184 S 184
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101216349 [Cucumis sativus]
Length = 1830
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 33/204 (16%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELK 64
N QP +PRF G +Y WS M S++ W +V+ GY EP S + L + +
Sbjct: 4 NMLQPQLPRFEGKNYRRWSQQMKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDAR 63
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
KD K +++Q++D I + I TAK WDA++ +EG +VK +LQ LR EF+T+
Sbjct: 64 KKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKVKLVRLQTLRAEFDTI 123
Query: 125 EMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
MK E ED +IVEKILR++T ++ IV +IEESKD+
Sbjct: 124 RMKDSETIEEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDLS 183
Query: 162 SLSEEAEVKEDEVKTLLGAEEEEE 185
+LS + +L+G+ + E
Sbjct: 184 TLS---------INSLMGSLQSHE 198
>gi|147777361|emb|CAN62886.1| hypothetical protein VITISV_039746 [Vitis vinifera]
Length = 209
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 91/187 (48%), Gaps = 74/187 (39%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
MT+E +F QPAI +F G+YDHW+MLM+NF+RSKEYWGLVE G A
Sbjct: 1 MTTESSFVQPAILKFDGYYDHWAMLMENFLRSKEYWGLVENGVPIVA------------- 47
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+D K FQ +VK++ LQALR E
Sbjct: 48 -----EDAK-----FQG----------------------------TTQVKRANLQALRNE 69
Query: 121 FETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEES 157
FE L MKSGE + +VEKILR++T KF+ +VCSIEES
Sbjct: 70 FEILHMKSGETMNEYFSHILAIANKMKVNGEDKGNTVVVEKILRSMTSKFDYVVCSIEES 129
Query: 158 KDIDSLS 164
KD+D+L+
Sbjct: 130 KDLDTLT 136
>gi|150036244|gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 33/209 (15%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M S GN Q +PRF G +++ WS+ M S+E W +VE GY E + S L +
Sbjct: 1 MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E + KD K +++QA+D I + I +AK WD ++ ++G +VK +LQALR
Sbjct: 61 LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
Query: 120 EFETLEMK---------------------SGEE--DVKIVEKILRTLTEKFNDIVCSIEE 156
EF+ ++MK +GEE D ++VEKILR++ KF IV +IEE
Sbjct: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
Query: 157 SKDIDSLSEEAEVKEDEVKTLLGAEEEEE 185
SKD+ +LS + +L+G+ + E
Sbjct: 181 SKDLSTLS---------INSLMGSLQSHE 200
>gi|147811646|emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 32/181 (17%)
Query: 8 SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
SQPAIP F G Y+ WS+ M +S++ W LVE GY P D ++ + K K
Sbjct: 12 SQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYP-------DEEARLKENTK-K 63
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++ QA+ +I I T KE W +K F+G+++V +LQ+LRR+FETL M
Sbjct: 64 DSKALFFIQQAVHESIFSKIAVATTTKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHM 123
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K+GE D IV K+LR+LT KF+ +V +IEESK + +
Sbjct: 124 KNGESVQDFLSRVAAIVNQMRSYGEDILDQTIVAKVLRSLTPKFDHVVAAIEESKGLSTY 183
Query: 164 S 164
S
Sbjct: 184 S 184
>gi|147804825|emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 88/187 (47%), Gaps = 60/187 (32%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M SE F Q AIPRF GHYDHW+MLM+NF+RSKEYW +V G +P + + A
Sbjct: 1 MASE-TFVQSAIPRFDGHYDHWNMLMENFLRSKEYWHVVSEGITKPTDNATMTQAQ---- 55
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
RT LD R+ K +G + S + E
Sbjct: 56 -------------------RTELDGQRRS----------TKVLQGQS---GSSFKHFETE 83
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
FETL M+SGE EDV IVEKILR++T FN +VCSIEES
Sbjct: 84 FETLRMRSGESVTDYFSRTMAIVNKMXIHGDKTEDVTIVEKILRSMTPXFNFVVCSIEES 143
Query: 158 KDIDSLS 164
DID LS
Sbjct: 144 HDIDELS 150
>gi|147834348|emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 86/187 (45%), Gaps = 60/187 (32%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M SE F QP IPRF GHYDH +MLM+NF+RSKEYW +V G EP + +
Sbjct: 1 MASE-TFVQPXIPRFDGHYDHXNMLMENFLRSKEYWHVVSEGITEPTXNATMTQXQ---- 55
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
RT LD R+ K +G + S + E
Sbjct: 56 -------------------RTELDXQRRS----------TKVLQGQS---GSSFKHFDTE 83
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
FETL M+SGE EDV IVEKILR++T FN +VCSIEES
Sbjct: 84 FETLRMRSGESVTDYFSRTMAIXNKMRIHGDKTEDVTIVEKILRSMTPXFNFVVCSIEES 143
Query: 158 KDIDSLS 164
DID LS
Sbjct: 144 HDIDELS 150
>gi|147857541|emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera]
Length = 870
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M+NF+RSKEYW +V +G EP G VL DA + + LKL+DLK KNYLFQAIDR+IL+T
Sbjct: 1 MENFLRSKEYWTVV-SGVAEPTEGVVLTDAQKTEFEGLKLRDLKAKNYLFQAIDRSILET 59
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
I KDTAK IWD+MKKK++ ++ + QAL+
Sbjct: 60 ILCKDTAKHIWDSMKKKYQAKINQQEKEEQALK 92
>gi|357517547|ref|XP_003629062.1| hypothetical protein MTR_8g072690 [Medicago truncatula]
gi|355523084|gb|AET03538.1| hypothetical protein MTR_8g072690 [Medicago truncatula]
Length = 152
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 99/163 (60%), Gaps = 20/163 (12%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVL-------MDAHQKMTDELKLKDLKVKNYLFQAI 78
M++F++SKEYW L+E Y + SG++ + + K K ++ Y Q
Sbjct: 1 MESFLKSKEYWELMEPDYVQSESGAIHNVCKVRGSNPSHHKKKKKKKKSGAIQTYAQQKK 60
Query: 79 DRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE--DVKIV 136
+ + I KKDT+K+IW++MKKKFEGNA VK+S LQAL F G+E DVK+V
Sbjct: 61 NEQM--NILKKDTSKKIWNSMKKKFEGNAMVKRSHLQAL---FADKMRIYGDEMSDVKVV 115
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLG 179
EKI+R+L EKF IVC IEESKDI++LS DE+++ LG
Sbjct: 116 EKIVRSLIEKFIYIVCYIEESKDIEALS------IDELQSSLG 152
>gi|297610014|ref|NP_001064026.2| Os10g0106900 [Oryza sativa Japonica Group]
gi|255679164|dbj|BAF25940.2| Os10g0106900 [Oryza sativa Japonica Group]
Length = 646
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 24/181 (13%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F G +YD WS+ M + S+ W +VE GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +KE WD +K++F+G+ +V +LQ LRR+F+ L M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM 121
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K E+ D K+VEKIL +L EK+ IV +IEESKD+ +L
Sbjct: 122 KESEKVKDYFPRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTL 181
Query: 164 S 164
+
Sbjct: 182 T 182
>gi|18542917|gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
gi|31429795|gb|AAP51797.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1350
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 24/181 (13%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F G +YD WS+ M + S+ W +VE GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +KE WD +K++F+G+ +V +LQ LRR+F+ L M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM 121
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K E+ D K+VEKIL +L EK+ IV +IEESKD+ +L
Sbjct: 122 KESEKVKDYFPRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTL 181
Query: 164 S 164
+
Sbjct: 182 T 182
>gi|261865355|gb|ACY01936.1| hypothetical protein [Beta vulgaris]
Length = 252
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 27/181 (14%)
Query: 8 SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
SQP+IP F G Y WS+ M +S+E W +VE GY+EP + +QK+ + K K
Sbjct: 10 SQPSIPIFKGEKYHLWSVKMQTLFKSQELWDIVECGYEEPNESPA--EPNQKLRENRK-K 66
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++ A+D I I T+K+ W+ +K ++ G+ +V +LQ LR EFE+L+M
Sbjct: 67 DAKALCFIQSAVDDDIFPRISTAKTSKDAWEIIKHEYRGDKKVISVKLQFLRSEFESLQM 126
Query: 127 KS---------------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GEE IV K+LR+L F+++V +IEESKD+ +
Sbjct: 127 KDKEPIQGYLSKVSAIINQMKSYGEEISSQAIVSKVLRSLNPSFDNVVAAIEESKDLSTY 186
Query: 164 S 164
+
Sbjct: 187 T 187
>gi|116309302|emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
Length = 1314
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 24/181 (13%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F G +YD WS+ M + S+ W +V+ GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVDNGYQEYSAGETLTAEQKKSLAEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +KE WD +K++F+G+ +V +LQ LRR+F+ L M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM 121
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K E+ D K+VEKIL +L EK+ IV +IEESKD+ +L
Sbjct: 122 KESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTL 181
Query: 164 S 164
+
Sbjct: 182 T 182
>gi|77553024|gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 24/181 (13%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F G +YD WS+ M + S+ W +VE GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +K+ WD +K++F+G+ +V +LQ LRR+F+ L M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKKAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM 121
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K E+ D K+VEKIL +L EK+ IV +IEESKD+ +L
Sbjct: 122 KESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTL 181
Query: 164 S 164
+
Sbjct: 182 T 182
>gi|18071369|gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108708461|gb|ABF96256.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1167
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 24/181 (13%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F G +YD WS+ M + S+ W +VE GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +KE WD +K++F+G+ +V +LQ LRR+F+ L M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM 121
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K E+ D K+VE+IL +L EK+ IV +IEESKD+ +L
Sbjct: 122 KESEKVKDYFSRVIEIVNQIRLYGEDINDQKVVEEILISLPEKYEYIVAAIEESKDLSTL 181
Query: 164 S 164
+
Sbjct: 182 T 182
>gi|147771031|emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 31/169 (18%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAI 78
Y+ WS+ M +S++ W LVE GY P D ++ + K KD K ++ QAI
Sbjct: 138 YEFWSIKMKTLFKSQDLWDLVENGYPYP-------DEEARLKENTK-KDSKALFFIQQAI 189
Query: 79 DRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------- 131
+I I TAKE W ++ F+G+++V +LQ+LRR+FETL MK+GE
Sbjct: 190 HESIFSKIAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESXQDFLSR 249
Query: 132 ----------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +V K+LR+LT KF+ +V IEESKD+ + S
Sbjct: 250 VAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYS 298
>gi|147795860|emb|CAN74228.1| hypothetical protein VITISV_000583 [Vitis vinifera]
Length = 909
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E FS A P F G +Y W++ M + + + W +E YD P + K
Sbjct: 1 MEIETTFSHVAPPIFDGDNYQAWAVRMXVHLEALDLWEAIEEDYDVPPLPANPTMTQLKT 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K + K K YLF + TI I ++AK+IWD +KK+++GN R K Q+ L R
Sbjct: 61 HKERKTRKSKAKAYLFFVVSSTIFTRIMNLESAKDIWDHLKKEYQGNERTKNMQVLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE L+MK E D +IV+KIL TL EK+ + S+EE
Sbjct: 121 EFEMLKMKETETIKDYSDKLLGIVNKVRLLGKDFSDERIVQKILITLPEKYESKISSLEE 180
Query: 157 SKDIDSLS 164
SKD+ S+S
Sbjct: 181 SKDLSSIS 188
>gi|31249765|gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1335
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 26/189 (13%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F G +YD WS+ M + S+ W +VE GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +KE WD +K++F+G+ +V +LQ LRR+F+ L M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM 121
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDI--D 161
K E+ D K+VEKIL +L EK+ IV + EESKD+ D
Sbjct: 122 KESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAATEESKDLSKD 181
Query: 162 SLSEEAEVK 170
SL E K
Sbjct: 182 SLESHEERK 190
>gi|224124512|ref|XP_002319350.1| predicted protein [Populus trichocarpa]
gi|222857726|gb|EEE95273.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 35/232 (15%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M++ N S AIP F G HY W++ M ++RS+ W +V + D P + A K
Sbjct: 1 MSTSSN-SASAIPVFSGEHYHIWAVKMRFYLRSQSLWNVVVSDSDPPPLTANPTIAQMKA 59
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLK K L + I I +T K++WD ++ +FEG++RVK +L AL+R
Sbjct: 60 HEEEKLKKDKAITCLHSGLADHIFTKIMDLETPKQVWDKLQGEFEGSSRVKTVRLLALKR 119
Query: 120 EFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEE 156
EFE ++MK E D K+VEKI+ ++ +KF + +IEE
Sbjct: 120 EFELMKMKDNESVKDYSGKLMDVVNQMRLLGKAFTDHKVVEKIMVSVPQKFEAKISAIEE 179
Query: 157 SKDIDS-----LSEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNC 203
S D+++ L+ + ++E V+ +EEA + A T +GS C
Sbjct: 180 SCDLNNLIIAELTSKLHIQEQRVQM-----RDEEAIEGAFQANTKERGSRTC 226
>gi|147786981|emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
Length = 1120
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E FS A P F G +Y W++ M + + + W +E YD P A K
Sbjct: 1 METETTFSHVAPPIFDGDNYQAWAVRMTVHLEALDLWEAIEEDYDVPPLPXNPXMAQLKT 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K + K K YLF + TI I + AK+IWD +KK+++GN R K ++ L R
Sbjct: 61 HKERKTRKSKAKAYLFSXVSSTIFTRIMNLEXAKDIWDYLKKEYQGNERTKNMKVLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE L+MK E D +IV+KIL TL EK+ + S+EE
Sbjct: 121 EFEMLKMKETENIKDYSDKLLGIVNKVRLLGKDFSDERIVQKILVTLXEKYESKISSLEE 180
Query: 157 SKDIDSLS 164
SKD S+S
Sbjct: 181 SKDXSSIS 188
>gi|147845303|emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 30/172 (17%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+YD W + M S++ W LVE G+DEP + ELK D K ++ Q
Sbjct: 218 NYDFWCVKMKTLFMSQDVWDLVENGFDEPP-------VEKXQLKELKKMDAKALLFIQQG 270
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK---------- 127
+ I I + AKE WD ++++F+G+ R + +LQALRRE E ++MK
Sbjct: 271 VGNNIFPRIMRASKAKEAWDILQQEFQGDKRTRSVKLQALRRELENMKMKENETLNEFSS 330
Query: 128 -----------SGEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
GEE D +IVEK+L +L KF+ IV IEE+KD+ LS +
Sbjct: 331 KFMELVNQMKSYGEEISDKRIVEKLLISLPSKFDPIVAVIEETKDLSLLSAQ 382
>gi|147859426|emb|CAN81437.1| hypothetical protein VITISV_001281 [Vitis vinifera]
Length = 1008
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 84/164 (51%), Gaps = 46/164 (28%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M SE F Q AIPRF GHYDHWS LM NF+RSKEYW +VE G +P ++ A ++
Sbjct: 1 MASE-TFVQLAIPRFDGHYDHWSXLMXNFLRSKEYWHIVEAGVAKP-----VLQALKRDF 54
Query: 61 DELKLKDLK-VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+ L++KD + V NY A+ + + K +F G
Sbjct: 55 ETLQMKDGESVTNYY-----------------ARTMXISNKMRFHGEKM----------- 86
Query: 120 EFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
EDV IVEKIL +LT KF+ +VCSIEE KDID+
Sbjct: 87 -----------EDVTIVEKILCSLTPKFDYVVCSIEEXKDIDAF 119
>gi|124359843|gb|ABD32432.2| polyprotein-related, putative [Medicago truncatula]
Length = 138
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 60/89 (67%), Gaps = 23/89 (25%)
Query: 99 MKKKFEGNARVKKSQLQALRREFETLEMKSGE-----------------------EDVKI 135
MKK FEGNARVK+S LQALRR+FETLEM+SGE +VK+
Sbjct: 1 MKKFFEGNARVKRSHLQALRRDFETLEMRSGEGVTKYFSRVTTVANKMRIYGEEMSNVKV 60
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
VEKILR+LTEKF IVCSIEESKDID LS
Sbjct: 61 VEKILRSLTEKFTYIVCSIEESKDIDYLS 89
>gi|1769897|emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 544
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 24 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 81
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++Q +D + + + +AKE W+ ++ ++G +VKK +LQ LR EFE L+M
Sbjct: 82 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 141
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GE +DV+I+EK+LR+L KF IV IEE+KD++++
Sbjct: 142 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 201
Query: 164 SEE 166
+ E
Sbjct: 202 TIE 204
>gi|12597806|gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++Q +D + + + +AKE W+ ++ ++G +VKK +LQ LR EFE L+M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GE +DV+I+EK+LR+L KF IV IEE+KD++++
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 164 SEE 166
+ E
Sbjct: 186 TIE 188
>gi|6850900|emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++Q +D + + + +AKE W+ ++ ++G +VKK +LQ LR EFE L+M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GE +DV+I+EK+LR+L KF IV IEE+KD++++
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 164 SEE 166
+ E
Sbjct: 186 TIE 188
>gi|5734736|gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++Q +D + + + +AKE W+ ++ ++G +VKK +LQ LR EFE L+M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GE +DV+I+EK+LR+L KF IV IEE+KD++++
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 164 SEE 166
+ E
Sbjct: 186 TIE 188
>gi|12321254|gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++Q +D + + + +AKE W+ ++ ++G +VKK +LQ LR EFE L+M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GE +DV+I+EK+LR+L KF IV IEE+KD++++
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 164 SEE 166
+ E
Sbjct: 186 TIE 188
>gi|449456267|ref|XP_004145871.1| PREDICTED: uncharacterized protein LOC101208246 [Cucumis sativus]
Length = 423
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 97/191 (50%), Gaps = 35/191 (18%)
Query: 1 MTSEGNF---SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAH 56
M + GN +QP I F G Y+ WSM M +RS++ W LVE Y +P D
Sbjct: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADP-------DDE 53
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
K+ E + KD K + QA+ + I T+KE W ++K F G+ RV +LQ+
Sbjct: 54 GKLR-EKRRKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQS 112
Query: 117 LRREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCS 153
LR+EFETL MK+ E D IVEK+LR+LT KF+ +V +
Sbjct: 113 LRKEFETLMMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAA 172
Query: 154 IEESKDIDSLS 164
IEESKD+ + +
Sbjct: 173 IEESKDLSTFT 183
>gi|6996308|emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++Q +D + + + +AKE W+ ++ ++G +VKK +LQ LR EFE L+M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GE +DV+I+EK+LR+L KF IV IEE+KD++++
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 164 SEE 166
+ E
Sbjct: 186 TIE 188
>gi|147862988|emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
Length = 1291
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MT N S IP F G HY W++ M ++RS+ W +V + D P G+ A K
Sbjct: 1 MTPSSNISS-VIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKA 59
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLK K L + I I +T K++WD ++ +FEG+ RVK +L L+R
Sbjct: 60 YEEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQVWDKLQGEFEGSERVKNVRLLTLKR 119
Query: 120 EFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEE 156
EFE ++MK E D K+VEKI+ ++ +KF + +IEE
Sbjct: 120 EFELMKMKDDESVKDYSGRLMDVVNQMRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEE 179
Query: 157 SKDIDSLS---EEAEVKEDEVKTLLGAEEEEEAGKFAEH 192
S D+ +L+ +++ E + L+ +E E A H
Sbjct: 180 SCDLQTLTIVELTSKLHAQEQRVLMRGDEATEGAFQANH 218
>gi|48843818|gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 24/181 (13%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F +YD WS+ M + S+ W +VE GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFARENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLVEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +KE WD +K++F+ + +V +LQ LRR+F+ L+M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQASQKVLAVKLQTLRRQFQNLQM 121
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K E+ D K+V+KIL +L EK+ IV +IEESKD+ +L
Sbjct: 122 KESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVKKILISLPEKYEYIVAAIEESKDLSTL 181
Query: 164 S 164
+
Sbjct: 182 T 182
>gi|6552735|gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLQMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++Q +D + + + +AKE W+ ++ ++G +VKK +LQ LR EFE L+M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGEFEALQM 125
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K GE +DV+I+EK+LR+L KF IV IEE+KD++++
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 164 SEE 166
+ E
Sbjct: 186 TIE 188
>gi|296082871|emb|CBI22172.3| unnamed protein product [Vitis vinifera]
Length = 1752
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 24/194 (12%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
G+E + KIV+KIL TL EK+ + S+E SKD+ S E E+ E
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLRYASTETEISP-ET 195
Query: 175 KTLLGAEEEEEAGK 188
+ L + E AGK
Sbjct: 196 TSKLRLKWEFYAGK 209
>gi|449481240|ref|XP_004156123.1| PREDICTED: uncharacterized protein LOC101231875 [Cucumis sativus]
Length = 423
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 96/191 (50%), Gaps = 35/191 (18%)
Query: 1 MTSEGNF---SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAH 56
M + GN +QP I F G Y+ WSM M RS++ W LVE Y +P D
Sbjct: 1 MDNHGNAMGTTQPLILIFKGEGYEFWSMRMKTLFRSQDLWDLVEHNYADP-------DDE 53
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
K+ E + KD K + QA+ + I T+KE W ++K F G+ RV +LQ+
Sbjct: 54 GKLR-EKRRKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQS 112
Query: 117 LRREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCS 153
LR+EFETL MK+ E D IVEK+LR+LT KF+ +V +
Sbjct: 113 LRQEFETLMMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAA 172
Query: 154 IEESKDIDSLS 164
IEESKD+ + +
Sbjct: 173 IEESKDLSTFT 183
>gi|47824985|gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 33/181 (18%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
SQP IP F G +Y WS+ M +S+E W +VETG P + M H+K +
Sbjct: 10 SQPLIPIFRGENYQFWSLKMKTLFKSQELWDIVETGI--PEGNANQMREHRK-------R 60
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + QA+D I I +T+K+ W+ +K+++ G+ +V +LQ LRR+FETL M
Sbjct: 61 DSKALFTIQQALDDEIFPRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFM 120
Query: 127 KSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
E ++ +V K+LR+LT KF +V +IEESKD+ +
Sbjct: 121 NENESVQGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTY 180
Query: 164 S 164
S
Sbjct: 181 S 181
>gi|147778267|emb|CAN60813.1| hypothetical protein VITISV_038722 [Vitis vinifera]
Length = 566
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M S++ W LVE G+DEP + L + ELK D K ++ Q + I
Sbjct: 1 MKTLFMSQDVWDLVENGFDEPENVITLTPLEKDQLKELKQMDAKTLLFIQQGVGNNIFPR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS----------------- 128
I + AKE WD ++++F+G+ + + +LQALRRE E ++MK
Sbjct: 61 IMRASKAKEAWDILQQEFQGDKKTRSIKLQALRRELENMKMKENETLNELSSRFMELVNQ 120
Query: 129 ----GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
GEE D +IVEK+L +L +KFN IV IEE+KD+ LS
Sbjct: 121 MKSYGEEINDKRIVEKLLISLPDKFNPIVVVIEETKDLSLLS 162
>gi|147836147|emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
Length = 1945
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 11 AIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
IP F G HY W++ M ++RS+ W +V + D P G+ A K +E KLK K
Sbjct: 211 VIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSETDPPPLGANPTVAQMKAYEEEKLKKDK 270
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
V L + I I +T K++WD ++ +FEG+ RVK +L L+R+FE ++MK
Sbjct: 271 VITCLHSGLADQIFTKIMNLETPKQVWDKLQGEFEGSERVKTVRLLTLKRKFELMKMKDD 330
Query: 130 EE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS-- 164
E D K+VEKI+ ++ +KF + +IEES D+ +L+
Sbjct: 331 ESVKDYSGRLMDVVNQMRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEESCDLQTLTIV 390
Query: 165 -EEAEVKEDEVKTLLGAEEEEEAGKFAEH 192
+++ E + L+ +E E A H
Sbjct: 391 ELTSKLHAQEQRVLMRGDEATEGAFQANH 419
>gi|224152499|ref|XP_002337246.1| predicted protein [Populus trichocarpa]
gi|222838548|gb|EEE76913.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 27/219 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS A P F G +Y W++ M+ ++ + + W VE Y+ PA + A K
Sbjct: 1 METEVSFSSIAPPVFNGDNYQFWAVRMETYLEALDLWEAVEEDYEIPALPNNPTMAQVKS 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K K LF A+ TI I TAKEIW+ +K ++EG+ R++ Q+ L R
Sbjct: 61 QKERKTKKSKAKACLFAAVASTIFTRIMSLKTAKEIWEFLKTEYEGDERIQGMQVLNLMR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
+FE +MK E + +IV+KIL T+ E F + S+E
Sbjct: 121 DFELQKMKKTESIKEYSDRLLNIASRISLLGSSLPESRIVQKILVTIPEIFEATITSLEN 180
Query: 157 SKDID--SLSEEAE-VKEDEVKTLLGAEEEEEAGKFAEH 192
+KD+ +L+E ++ E + ++ E+E E F +H
Sbjct: 181 TKDMSKITLTEMLNALQAQEQRRIMRQEDEIEGALFVKH 219
>gi|147787712|emb|CAN74050.1| hypothetical protein VITISV_040588 [Vitis vinifera]
Length = 1067
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 60/89 (67%), Gaps = 23/89 (25%)
Query: 99 MKKKFEGNARVKKSQLQALRREFETLEMKSGE-----------------------EDVKI 135
MKKK+EGNARVK+S LQALRR+FETLEMKSGE +V I
Sbjct: 1 MKKKYEGNARVKRSILQALRRDFETLEMKSGECITDYFSRVMSVSNKMRFHGEQMREVTI 60
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
VEKILR+LT+ FN IVCSIEESKD D+L+
Sbjct: 61 VEKILRSLTDNFNYIVCSIEESKDTDTLT 89
>gi|357506619|ref|XP_003623598.1| hypothetical protein MTR_7g072950 [Medicago truncatula]
gi|355498613|gb|AES79816.1| hypothetical protein MTR_7g072950 [Medicago truncatula]
Length = 91
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 57/69 (82%)
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
E KL DLK KNYLFQ+IDR+I+ TI +DTAK+IW +M +K++G+ +VK++QL+ LRREF
Sbjct: 2 ESKLCDLKAKNYLFQSIDRSIMVTILVRDTAKDIWHSMHRKYQGSTKVKRAQLKTLRREF 61
Query: 122 ETLEMKSGE 130
E L+MK GE
Sbjct: 62 EVLDMKEGE 70
>gi|297738601|emb|CBI27846.3| unnamed protein product [Vitis vinifera]
Length = 780
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MT E + + P F G +Y W++ M+ ++ + + W V Y+ P A K+
Sbjct: 1 MTLEASLNALTPPMFDGINYQVWAVRMEAYLDASDLWEAVSEEYEVPPLSDNPTIAQIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E + + KVK LF + TI I T EIW+ +KK++EGN RVK Q+ L R
Sbjct: 61 HNERRQRKSKVKASLFAVVSSTIFTRIMTLKTTNEIWNFLKKEYEGNERVKGMQVLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E + +IV+KI T++EKF + + S+E
Sbjct: 121 EFEMQRMKESETIKDYSDKLLSIVNKVRLLGVDFSNSRIVQKIFITVSEKFENTISSLEN 180
Query: 157 SKDIDSLS 164
SKD+ S++
Sbjct: 181 SKDVSSIT 188
>gi|147865954|emb|CAN78841.1| hypothetical protein VITISV_036973 [Vitis vinifera]
Length = 251
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 44/56 (78%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAH 56
M EGNF Q AIPRF GHYDHWSMLM+ +R KEYW LVETGY EP SG+VL++A
Sbjct: 196 MRIEGNFVQLAIPRFDGHYDHWSMLMEKILRFKEYWSLVETGYVEPESGAVLIEAQ 251
>gi|224097570|ref|XP_002334601.1| predicted protein [Populus trichocarpa]
gi|222873462|gb|EEF10593.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 1 MTSEGNFSQPAIPRFVGHYDH-WSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M++ N + AIP F G H W++ M ++RS+ W +V T D P + A K
Sbjct: 1 MSTSSNIAS-AIPMFSGELYHIWAVKMRFYLRSQGLWNVVVTDSDPPPLNANPTIAQMKA 59
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLK K L + I I +T K++WD ++ +FEG+ RVK +L A +R
Sbjct: 60 HEEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQVWDKLQIEFEGSNRVKSVKLLAFKR 119
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE ++MK E ED K+VEK++ ++ +KF + +IEE
Sbjct: 120 EFELMKMKDNESVKDYSGRLMDVVNQMRLLGNTFEDHKVVEKLMMSVPQKFEAKISAIEE 179
Query: 157 SKDIDSLS 164
S D+ +L+
Sbjct: 180 SCDLQNLT 187
>gi|356574359|ref|XP_003555316.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like
[Glycine max]
Length = 1204
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 23/157 (14%)
Query: 32 SKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDT 91
+ + W +VE G+ P S L + +K + K K+ K L QA+ I I T
Sbjct: 272 TADLWDIVEEGFTIPVDTSALNASQEKELKKNKQKNSKALFTLQQAVTNPIFLRIMGAKT 331
Query: 92 AKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------------E 131
AKE W+ ++++F+G+ +V+ +LQ+LRR+FE L+MK E E
Sbjct: 332 AKEAWNTLQEEFQGSVKVRAIKLQSLRRDFELLKMKESETVKDYYSKVKGIVNQMRAFGE 391
Query: 132 DV---KIVEKILRTLTEKFNDIVCSIEESKDIDSLSE 165
D+ KIVEKIL T+ +KF+ IV +IEE+KD+ +LSE
Sbjct: 392 DILDKKIVEKILITMPQKFDPIVTTIEETKDLSTLSE 428
>gi|225016148|gb|ACN78972.1| truncated copia-type polyprotein [Glycine max]
gi|225016156|gb|ACN78979.1| truncated copia-type polyprotein [Glycine max]
Length = 212
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 85/188 (45%), Gaps = 60/188 (31%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M S G S PR +YD+W M + S++ W +VE G DE
Sbjct: 1 MASNG-LSMFQFPRLTKENYDNWCRRMKALLGSQDAWEIVEKGLDE-------------- 45
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+ + + T+KE W+ +K EG +VKK +LQ LRR
Sbjct: 46 ---------------------AMFELVSNATTSKEAWEILKTSLEGVDKVKKVRLQTLRR 84
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE+L MK E EDV++VEKILR+L KF+ +VC+IEE
Sbjct: 85 EFESLHMKESESISDFGNKVLAIVNQMKRYGENMEDVRVVEKILRSLIAKFDYVVCAIEE 144
Query: 157 SKDIDSLS 164
SKD+DS++
Sbjct: 145 SKDLDSIT 152
>gi|359497632|ref|XP_003635592.1| PREDICTED: subtilisin-like protease-like, partial [Vitis vinifera]
Length = 837
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +I I K D+ EIW+ +K++++G+ R+K Q+ L REFE +M+ +
Sbjct: 77 VSPSIFIKIMKIDSTAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+ KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|224096936|ref|XP_002310792.1| predicted protein [Populus trichocarpa]
gi|222853695|gb|EEE91242.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 5 GNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL 63
N S +IP F G HY W++ M ++RS++ W +V + D P + A K +E
Sbjct: 4 SNNSASSIPLFNGEHYHIWAVKMRFYLRSQDLWNVVVSDSDPPPLTANPTIAQMKAHEEE 63
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
KLK K L + I I +T K++WD ++ +FE ++RVK +L AL+REFE
Sbjct: 64 KLKKDKTITCLHSGLADHIFTKIMDLETPKQVWDKLQGEFEDSSRVKIVRLLALKREFEL 123
Query: 124 LEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDI 160
++MK E D K+VEKI+ ++ +KF + +IEES D+
Sbjct: 124 MKMKDNESIKDYSSRLMDIVNQMRLLGKAFTDHKVVEKIMVSVPQKFEAKISAIEESCDL 183
Query: 161 DSLS 164
++L+
Sbjct: 184 NNLT 187
>gi|147776648|emb|CAN73998.1| hypothetical protein VITISV_043372 [Vitis vinifera]
Length = 634
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M+ N S IP F G HY W++ M ++RS+ W +V + D P G+ A K
Sbjct: 1 MSPSSNTSS-VIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKA 59
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLK K L + I I +T K +WD ++ +FEG+ RVK +L L+R
Sbjct: 60 YEEEKLKKDKAITCLHSGLADHIFTKIMNLETPKLVWDKLQGEFEGSERVKTVRLLTLKR 119
Query: 120 EFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEE 156
EFE ++MK E D K+VEKI+ ++ +KF + +IEE
Sbjct: 120 EFELMKMKDDESVKDYSGRLMDVVNQIQLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEE 179
Query: 157 SKDIDSL 163
S D+ +L
Sbjct: 180 SCDLQTL 186
>gi|356533047|ref|XP_003535080.1| PREDICTED: uncharacterized protein LOC100781109 [Glycine max]
Length = 444
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 26/189 (13%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W +VE Y+ P + M A K
Sbjct: 1 MEGEASFSHITLPIFDGENYDLWEVKMQSYMESLDLWDVVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K KV+ LF + + I I ++K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKVRPCLFTGVSQMIFIRIMTLKSSKAIWDYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIE 155
REFE M+ E D +IVEKIL T+ E++ + S+E
Sbjct: 120 REFELQRMEESETIKEYLNKLLGIANKIKLLGSDFTDSRIVEKILVTVPERYEAFIASLE 179
Query: 156 ESKDIDSLS 164
+KD+ ++
Sbjct: 180 NTKDLSKIA 188
>gi|147856256|emb|CAN79644.1| hypothetical protein VITISV_033788 [Vitis vinifera]
Length = 1181
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
HY W++ M ++RS+ W +V D P G+ + A K DE KLK K L
Sbjct: 18 HYHIWAVKMRFYLRSQGLWNVVMFEADPPPLGANPIVAQMKAYDEEKLKKDKAITCLHSG 77
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ I I +T K +WD ++ +FEG+ RVK +L L+REFE ++MK E
Sbjct: 78 LADHIFTKIMNLETPKLVWDKLQGEFEGSERVKTVRLFTLKREFELMKMKDDESIKDYSG 137
Query: 132 -----------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS---EEAEVKE 171
D K+VEKI+ ++ +KF + +IEES D+ +L+ +++
Sbjct: 138 RLMDVVNQMRLLGEAFTDQKVVEKIMVSMPQKFEAKISAIEESCDLQTLTIVELTSKLHA 197
Query: 172 DEVKTLLGAEEEEEAGKFAEH 192
E + L+ +E E A H
Sbjct: 198 XEQRVLMRGDEATEGAFQANH 218
>gi|356544663|ref|XP_003540767.1| PREDICTED: uncharacterized protein LOC100797817 [Glycine max]
Length = 639
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 27/187 (14%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M G F+ +P F G ++ WS+ M +++ V G P +A + +
Sbjct: 1 MNGNGGFNT-HLPVFDGRNWSRWSIQMRVLFGAQDVLEFVNDGV--PVLAENTTEAQRNL 57
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K KD K Y+ Q +D I + I + TAK WD + + + GNA VKK +LQ+LR+
Sbjct: 58 HREKKKKDQKALFYIHQCVDAKIFEKIAESTTAKAAWDTLVRCYGGNATVKKVKLQSLRK 117
Query: 120 EFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEE 156
++E L MK E+ + IVEK+LR+LT +F+ IV +IE+
Sbjct: 118 QYENLNMKHNEKVADYVSRIITVTNEMKTCGETISEQMIVEKVLRSLTAQFDHIVVAIEQ 177
Query: 157 SKDIDSL 163
SKD ++
Sbjct: 178 SKDTSTM 184
>gi|147788526|emb|CAN65302.1| hypothetical protein VITISV_002195 [Vitis vinifera]
Length = 581
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 27/172 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV---- 133
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+ E DV
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR--ESDVVKDY 134
Query: 134 ---------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 135 AAQLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147863420|emb|CAN79357.1| hypothetical protein VITISV_025405 [Vitis vinifera]
Length = 581
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 27/172 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV---- 133
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+ E DV
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR--ESDVVKDY 134
Query: 134 ---------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 135 AAQLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147788107|emb|CAN69334.1| hypothetical protein VITISV_003274 [Vitis vinifera]
Length = 923
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 81/170 (47%), Gaps = 24/170 (14%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E FS A P F G +Y W++ M + + + W +E YD P + K
Sbjct: 1 METETTFSHVAPPIFDGDNYQAWAIRMTVHLEALDLWEAIEEDYDVPPLPANPTMTQLKT 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K + KVK YLF A+ TI I ++AK+IWD +KK++ GN R K Q+ L R
Sbjct: 61 HKERKTRKSKVKAYLFSAVSSTIFTRIMNLESAKDIWDYLKKEYRGNERTKNMQVINLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEK 146
EFE L+MK E D +IV+KIL TL EK
Sbjct: 121 EFEMLKMKETETIKDNSDNLLGIVNKVRLLGKDFSDERIVQKILVTLPEK 170
>gi|147819265|emb|CAN68965.1| hypothetical protein VITISV_031258 [Vitis vinifera]
Length = 570
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 27/172 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV---- 133
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+ E DV
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR--ESDVVKDY 134
Query: 134 ---------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 135 AAQLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|224150796|ref|XP_002337010.1| predicted protein [Populus trichocarpa]
gi|222837569|gb|EEE75934.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS A P F G +Y W++ M+ ++ + + W VE YD + K
Sbjct: 1 MEAETSFSSIAPPVFNGDNYQIWAVRMETYLEALDLWEAVEEDYDVHVLPNNSTMTQIKT 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E+K K K K LF A+ TI I + T K IWD +K+++ G+ R++ Q+ L R
Sbjct: 61 YKEMKTKKSKAKACLFAAVSSTIFTRIMSRKTVKSIWDYLKEEYAGDERIRGMQVLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
+FE +MK E D +I+EKIL T+ E++ V ++E
Sbjct: 121 DFELQKMKESETIKEYSDRLLGIANKIRLLGSEFSDSRIIEKILVTVPERYEATVTTLEN 180
Query: 157 SKDIDSLS 164
+KD+ +S
Sbjct: 181 TKDLSKIS 188
>gi|147841017|emb|CAN62009.1| hypothetical protein VITISV_021498 [Vitis vinifera]
Length = 547
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 44/53 (83%)
Query: 34 EYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTI 86
EYW LVETGY EP SG VL + QK DE+KLKDLKVKNYLFQAIDRTIL+TI
Sbjct: 495 EYWSLVETGYVEPESGPVLTEVQQKKLDEMKLKDLKVKNYLFQAIDRTILETI 547
>gi|147822540|emb|CAN63946.1| hypothetical protein VITISV_035427 [Vitis vinifera]
Length = 575
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSISDKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147770077|emb|CAN72134.1| hypothetical protein VITISV_028721 [Vitis vinifera]
Length = 485
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147822225|emb|CAN63943.1| hypothetical protein VITISV_030434 [Vitis vinifera]
Length = 570
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEXTISSLENSKDLSTIS 186
>gi|147797712|emb|CAN76346.1| hypothetical protein VITISV_024039 [Vitis vinifera]
Length = 571
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147776624|emb|CAN65122.1| hypothetical protein VITISV_018226 [Vitis vinifera]
Length = 789
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 68/105 (64%), Gaps = 23/105 (21%)
Query: 83 LDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------ 130
++TI +D AK IWD+MK+K +G+ RVK++QLQALR+EFE L++K GE
Sbjct: 1 METILNRDIAKHIWDSMKQKNQGSTRVKRTQLQALRKEFEVLQIKEGESVDAYFARTLII 60
Query: 131 -----------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+ + I+EKIL+++T +F+ +VCS EES ++D+L+
Sbjct: 61 ANKMKIHGENMQQMVIIEKILKSMTSRFDYVVCSTEESNNLDTLT 105
>gi|147805321|emb|CAN69620.1| hypothetical protein VITISV_008603 [Vitis vinifera]
gi|147841281|emb|CAN62417.1| hypothetical protein VITISV_038422 [Vitis vinifera]
Length = 570
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147812205|emb|CAN68854.1| hypothetical protein VITISV_000898 [Vitis vinifera]
Length = 559
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147857655|emb|CAN83079.1| hypothetical protein VITISV_024674 [Vitis vinifera]
Length = 595
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147811660|emb|CAN65969.1| hypothetical protein VITISV_020934 [Vitis vinifera]
Length = 575
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147781105|emb|CAN64972.1| hypothetical protein VITISV_025928 [Vitis vinifera]
Length = 570
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147778840|emb|CAN67045.1| hypothetical protein VITISV_001149 [Vitis vinifera]
Length = 515
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAIRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147779984|emb|CAN75537.1| hypothetical protein VITISV_009642 [Vitis vinifera]
Length = 577
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTMAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147772049|emb|CAN66753.1| hypothetical protein VITISV_036089 [Vitis vinifera]
Length = 573
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147778997|emb|CAN60312.1| hypothetical protein VITISV_036303 [Vitis vinifera]
Length = 509
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRMLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147789978|emb|CAN60688.1| hypothetical protein VITISV_017222 [Vitis vinifera]
Length = 538
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147773033|emb|CAN60644.1| hypothetical protein VITISV_025693 [Vitis vinifera]
Length = 595
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W E Y+ P G+ A K+ E K + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAXEENYEVPPLGANPTVAQMKLHKERKTRXAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K ++A EIW+ +K +++GN R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKINSAXEIWEYLKXEYKGNERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|449529553|ref|XP_004171764.1| PREDICTED: uncharacterized protein LOC101225956, partial [Cucumis
sativus]
Length = 221
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 59/89 (66%), Gaps = 23/89 (25%)
Query: 99 MKKKFEGNARVKKSQLQALRREFETLEMKSGE-----------------------EDVKI 135
MKKK+EGNARV++S LQAL REFE LEMKSGE +DVK+
Sbjct: 1 MKKKYEGNARVRRSYLQALCREFEILEMKSGEGVTEYFSRVMIVANKMRTYGEDMQDVKV 60
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
VEKILR+LT+ FN IV SIEESKD ++L+
Sbjct: 61 VEKILRSLTDNFNYIVSSIEESKDPNTLT 89
>gi|356551241|ref|XP_003543985.1| PREDICTED: uncharacterized protein LOC100802976 [Glycine max]
Length = 335
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E +++ + P F G Y+ W+ M + + + W VE YD P A K
Sbjct: 1 MEGETSYTTGSPPIFYGEEYELWAARMTTHLEALDLWEAVEESYDVPELPLDPTVAQMKN 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K KN LF A+ + I I +AK+IWD + +++G R K Q+ L R
Sbjct: 61 HRERKTKKAKAKNCLFSAVSKIIFTRIMNFKSAKQIWDYLISEYQGCERTKGMQVLNLGR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E D +IV+KIL T+ EK+ + ++EE
Sbjct: 121 EFEMQSMKETEIIKGYTDQLLGIANRVRLLGKDFPDERIVQKILVTIPEKYESKISALEE 180
Query: 157 SKDIDSLS 164
SKD+ +++
Sbjct: 181 SKDLSTIT 188
>gi|357457917|ref|XP_003599239.1| F-box protein [Medicago truncatula]
gi|355488287|gb|AES69490.1| F-box protein [Medicago truncatula]
Length = 800
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 29/193 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGS--VLMDAHQKMTDELKLKDLKVKNYLF 75
+++ WS +M N +++ +++ G DE A + V +AH+ ELK KD K +
Sbjct: 533 NWERWSAVMKNLFGAQDLLEIMQNGVDELAMNATEVQRNAHK----ELKKKDCKALFLIQ 588
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE---- 131
Q++D + I K +KE WD + K EG +VK +LQ+LRR+FE ++M+ ++
Sbjct: 589 QSLDEGNFERISKTVRSKEAWDILSKYHEGGDKVKLIKLQSLRRKFELVQMEDDQKISEY 648
Query: 132 -------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKED 172
D IVEKI+RTL+ +FN IV +I+ESKD+ +L E
Sbjct: 649 ISKLINLVNQMKACSEAITDQHIVEKIMRTLSSRFNFIVVAIQESKDVKTLKIEELQSSL 708
Query: 173 EVKTLLGAEEEEE 185
E L+ E E
Sbjct: 709 EAHELMVTERSSE 721
>gi|356510027|ref|XP_003523742.1| PREDICTED: uncharacterized protein LOC100818405 [Glycine max]
Length = 172
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 55/89 (61%), Gaps = 23/89 (25%)
Query: 99 MKKKFEGNARVKKSQLQALRREFETLEMKSGEE-----------------------DVKI 135
MK+K+E + RVK++QLQALRR+FETL MK GE D I
Sbjct: 1 MKRKYEDSVRVKRAQLQALRRDFETLAMKDGESVTNYFARTMEISNKMRFHGEKMTDATI 60
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
VEKILR+LT FN +VCSIEESKDID LS
Sbjct: 61 VEKILRSLTTNFNYVVCSIEESKDIDVLS 89
>gi|147805222|emb|CAN77863.1| hypothetical protein VITISV_022394 [Vitis vinifera]
Length = 473
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAVEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYVA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|9294121|dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 25/180 (13%)
Query: 9 QPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKD 67
Q IP F G Y W + M +++++ W ++E G +S A + D+ +KD
Sbjct: 6 QQVIPIFNGESYGFWKIKMITILKTRKLWDVIENGVTSNSSPET-SPALTRERDDQVMKD 64
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ L A+ +I I +A E W+A++ +F+G+++VK LQ LRRE+E L+M+
Sbjct: 65 MMALQILQSAVSDSIFPRIAPASSATEAWNALEMEFQGSSQVKMINLQTLRREYENLKME 124
Query: 128 SGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
GE D ++V+KIL ++ ++F+ IV +E++KD+ +LS
Sbjct: 125 EGETINDFTTKLINLSNQLRVHGEEKSDYQVVQKILISVPQQFDSIVGVLEQTKDLSTLS 184
>gi|147858492|emb|CAN81397.1| hypothetical protein VITISV_018726 [Vitis vinifera]
Length = 567
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+ EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSTAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|297737422|emb|CBI26623.3| unnamed protein product [Vitis vinifera]
Length = 1940
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 736 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 795
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 796 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 855
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 856 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 905
>gi|6642775|gb|AAF20282.1| gag-pol polyprotein [Vitis vinifera]
Length = 581
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGADPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL +K+ + S+E SKD+ ++S
Sbjct: 137 QLLSIANKVRLLGKEFSNEKIVQKILVTLPKKYEATISSLENSKDLSTIS 186
>gi|147826941|emb|CAN68874.1| hypothetical protein VITISV_001416 [Vitis vinifera]
Length = 529
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+ Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIXNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147866995|emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
Length = 1770
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 79/159 (49%), Gaps = 47/159 (29%)
Query: 34 EYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAK 93
EYW LVETGY EP S ++L +A QK DE+KLKDLK
Sbjct: 307 EYWSLVETGYVEPESEAILTEAQQKKLDEMKLKDLK------------------------ 342
Query: 94 EIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCS 153
KK+EGN RVK+S +QALR+EFET+EMK GE +++ +
Sbjct: 343 -------KKYEGNERVKQSIIQALRKEFETIEMKFGEGVSDYFSRVMSVANK------MR 389
Query: 154 IEESKDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEH 192
+ ESKDID LS DE+++ L E+ KF H
Sbjct: 390 VHESKDIDLLS------IDEMQSSLIVHEQ----KFHRH 418
>gi|147775979|emb|CAN73455.1| hypothetical protein VITISV_003293 [Vitis vinifera]
Length = 581
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K +++G+ R++ Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKGEYKGDERIRNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV++IL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQQILVTLPEKYEATISSLENSKDLSTIS 186
>gi|356565685|ref|XP_003551068.1| PREDICTED: uncharacterized protein LOC100777015 [Glycine max]
Length = 904
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E NFS +P F G +YD W + M ++M S + W +VE Y+ P + M A K
Sbjct: 1 MEGEANFSHITLPIFDGENYDLWEVKMQSYMESLDLWDVVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K +++LF + + I I + IWD +K+++ + R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSFLFTGVSQMIFIRIMTLKSPTAIWDYLKEEYARDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIE 155
REFE M+ E D +IVEKIL T+ E++ + S+E
Sbjct: 120 REFELQRMEESETIKEYSNKLLGIANKIKLLGSDFADSRIVEKILVTVPERYEASIASLE 179
Query: 156 ESKDIDSLS 164
+KD+ ++
Sbjct: 180 NTKDLSKIT 188
>gi|147768613|emb|CAN67165.1| hypothetical protein VITISV_037677 [Vitis vinifera]
Length = 571
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A +IW+ +K +++G+ R++ Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAKIWEYLKGEYKGDERIRNMQVMNLIREFEIKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147858493|emb|CAN81398.1| hypothetical protein VITISV_018727 [Vitis vinifera]
Length = 954
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MTS + + A P F G +Y W + ++ ++ + + W +V Y+ P A K+
Sbjct: 1 MTSXVSLNALAPPVFDGINYQVWXVRIEAYLDASDLWEVVSEXYEVPPLSDNPTMAQIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E + + K K LF A+ I I T EIW+ +KK++EGN +VK Q+ L R
Sbjct: 61 HNERRQRKSKAKASLFAAVSSIIFTRIMTLKTTNEIWNFLKKEYEGNEQVKGMQVLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E D +IV+KI T+ EKF + S+E
Sbjct: 121 EFEMQRMKELETIKDYSDRLLSIVNKVRLLDIDFSDSRIVQKISITIPEKFETTISSLEN 180
Query: 157 SKDIDSLS 164
SKD+ S++
Sbjct: 181 SKDVSSIT 188
>gi|356554163|ref|XP_003545418.1| PREDICTED: uncharacterized protein LOC100775695 [Glycine max]
Length = 462
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 9/221 (4%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W +VE Y+ P + M A K
Sbjct: 1 MEGEASFSHITLPIFNGENYDLWEVKMQSYMESLDVWDVVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEV 174
REFE MK E + K+L + K + S+E +KD+ ++ AEV + E
Sbjct: 120 REFELQRMKESETIKEYSNKLL-GIANKIKLLGTSLEITKDLSKIT-LAEVLHALQAQEQ 177
Query: 175 KTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ L+ + E A+H +K C K FR
Sbjct: 178 RRLMRQDRVVEGALPAKHHEDKKKNYPPCQHCGKKGHAPFR 218
>gi|356577809|ref|XP_003557015.1| PREDICTED: uncharacterized protein LOC100798180 [Glycine max]
Length = 446
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 7 FSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDE-PASGSVLMDAHQKMTDELK 64
FS +P F G +YD W + M ++M S + W VE Y+ P + M A K E K
Sbjct: 41 FSHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIFPLPENPTM-AQIKNHKERK 99
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LRREFE L
Sbjct: 100 MKKAKARSCLFTGVSQMIFIRIMTLKSPKSIWDYLKEEYAGDDRIRSMQVLNLRREFELL 159
Query: 125 EMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEVKTLLGA 180
M+ E + K+L + K + S+E +KD+ ++ AEV + E + L+
Sbjct: 160 RMEDSETIKEYSNKLL-GIANKIKLLGTSLENTKDLSKIT-LAEVLHALQAQEQRRLMRQ 217
Query: 181 EEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ E A+H +K CH K FR
Sbjct: 218 DRVVEGALPAKHHEDKKKNYPPCHHCGKKGHAPFR 252
>gi|224086387|ref|XP_002307877.1| predicted protein [Populus trichocarpa]
gi|222853853|gb|EEE91400.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 24/184 (13%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS A P F G +Y W++ M+ ++ + + W VE YD P K
Sbjct: 1 MEAETSFSSIAPPVFNGDNYQIWAVRMETYLEALDLWEAVEEDYDVPVLLKNPTMTQIKT 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E+K K K K LF A+ TI I TAK IWD +K+++ + R++ Q+ L R
Sbjct: 61 HKEMKTKKSKAKACLFVAVSTTIFTRIMSHKTAKSIWDYLKEEYAVDERIRGMQVLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
+FE +MK E D +IVEKIL T+ +++ V ++E
Sbjct: 121 DFELQKMKESETIKEYSDRLLGIANEIRLLGSEFSDSRIVEKILVTVPKRYEATVTTLEN 180
Query: 157 SKDI 160
+KD+
Sbjct: 181 TKDL 184
>gi|296090421|emb|CBI40240.3| unnamed protein product [Vitis vinifera]
Length = 2196
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
HY W++ M ++RS+ W +V + D P G+ A K +E KLK K L
Sbjct: 18 HYHIWAVKMRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKAYEEEKLKKDKAITCLHSG 77
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ I I +T K +WD ++ +FEG+ R K +L L+REFE ++MK E
Sbjct: 78 LTDHIFTKIMNLETPKLVWDKLQGEFEGSERFKTVRLLKLKREFELMKMKDDEFVKDYSG 137
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS---EEAEVKE 171
D K+VEKI+ + +KF + +IEES D+ +L+ +++
Sbjct: 138 RLMDVVNQIRLLGEAFTDQKVVEKIMVLVPQKFEAKISAIEESCDLQTLTIVELTSKLHA 197
Query: 172 DEVKTLLGAEEEEEAGKFAEH 192
E + L+ +E E A H
Sbjct: 198 QEQRVLMRGDEATEGAFQANH 218
>gi|356495123|ref|XP_003516430.1| PREDICTED: uncharacterized protein LOC100785903 [Glycine max]
Length = 670
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 30/191 (15%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD---EPASGSVLMDAH 56
M E +FS +P F G +YD W + M ++M S + W VE Y+ P + +++ +
Sbjct: 1 MEGEASFSHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIFPLPENPTMVQIKN 60
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
K E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+
Sbjct: 61 HK---ERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRNMQVLN 117
Query: 117 LRREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCS 153
LRREFE M+ E D +I+EKIL T+ E++ + S
Sbjct: 118 LRREFELQRMQESETIKEYSNKLLGIANKIKLLGSDFVDSRIIEKILVTVPERYEASIAS 177
Query: 154 IEESKDIDSLS 164
+E +KD+ ++
Sbjct: 178 LENTKDLSKIT 188
>gi|77556816|gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 15/158 (9%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+Q +P F G +YD WS+ M + S+ W +VE GY E ++G L +K E ++
Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMS 61
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K + Q + ++ I +KE WD +K++F+G+ Q +R E +
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGS--------QKMRLYGEDI-- 111
Query: 127 KSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D K+VEKIL +L EK+ IV +IEESKD+ +L+
Sbjct: 112 ----NDQKVVEKILISLPEKYEYIVAAIEESKDMLTLT 145
>gi|147790287|emb|CAN74375.1| hypothetical protein VITISV_044324 [Vitis vinifera]
Length = 523
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+A EIW+ +K++++G+ R+ + L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIXNMXVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|356566371|ref|XP_003551406.1| PREDICTED: uncharacterized protein LOC100816061 [Glycine max]
Length = 444
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 33/232 (14%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +++ +P F G +YD W + M ++M S + W VE Y+ P + M A K
Sbjct: 1 MEGEASYTHITLPIFDGENYDLWEVKMQSYMESLDLWDTVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIE 155
REFE M+ E D +IVEKIL T+ E++ + S+E
Sbjct: 120 REFELQRMQESETIEEYSNKLLGIANKIKLLGSDFADSRIVEKILVTVPERYEASITSLE 179
Query: 156 ESKDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTW 207
+KD+ ++ AEV + L E+ + +E W G +N H T+
Sbjct: 180 NTKDLSKIT-LAEV----LHALQAQEQRRLMSESSESWLID-SGCTN-HMTY 224
>gi|224096740|ref|XP_002334673.1| predicted protein [Populus trichocarpa]
gi|222874106|gb|EEF11237.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M++ N S AIP F G HY W++ M ++RS+ W +V + D P + + A K
Sbjct: 1 MSTSSN-SASAIPVFNGEHYHIWAVKMRFYLRSQGLWNVVVSDSDPPPLTANPIIAQMKA 59
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLK K L+ + I I +T KE+WD ++ +FEG+ RVK +L AL+R
Sbjct: 60 HEEEKLKKDKANTCLYSGLADHIFTKIMDLETPKEVWDKLQGEFEGSNRVKTVRLLALKR 119
Query: 120 EFETLEMKSGE 130
EFE ++MK E
Sbjct: 120 EFELMKMKDNE 130
>gi|224132568|ref|XP_002327828.1| predicted protein [Populus trichocarpa]
gi|222837237|gb|EEE75616.1| predicted protein [Populus trichocarpa]
Length = 254
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 30/191 (15%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY---DEPASGSVLMDAH 56
M SE S + F G +Y+ W++ M + + + W VE Y D PA+ +V
Sbjct: 1 MDSESIISHGSPLIFNGENYETWAIKMTIHLEALDLWEAVEENYIFPDLPANPTV---TQ 57
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
K+ E K + K K L+ A+ TI I ++AK IWD +KK+++GN R K Q+
Sbjct: 58 LKIHKENKTRKSKAKACLYAAVSNTIFTRIMNLESAKGIWDYLKKEYQGNERTKNMQVLN 117
Query: 117 LRREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCS 153
+ REFE +MK E D +IV+KIL T+ EK+ + S
Sbjct: 118 IIREFEMQKMKETENIKDYADKLLSIINKVRLLGKEFSDDRIVQKILVTMPEKYESKISS 177
Query: 154 IEESKDIDSLS 164
+EESKD+ ++S
Sbjct: 178 LEESKDLTNIS 188
>gi|147815205|emb|CAN70170.1| hypothetical protein VITISV_006874 [Vitis vinifera]
Length = 559
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 45/61 (73%)
Query: 9 QPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDL 68
+P + +F GHYDHW+MLM NF+ SKEYWGLVE G A G VL+DA +K D+ KLKDL
Sbjct: 497 EPTVSKFDGHYDHWAMLMKNFLCSKEYWGLVENGILAAAEGVVLIDAQRKNIDDQKLKDL 556
Query: 69 K 69
K
Sbjct: 557 K 557
>gi|357440057|ref|XP_003590306.1| hypothetical protein MTR_1g056260 [Medicago truncatula]
gi|355479354|gb|AES60557.1| hypothetical protein MTR_1g056260 [Medicago truncatula]
Length = 125
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 28 NFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIR 87
NF+RSKEYW LV+ G SG L A QK E+ LK LKVKNYL AIDR I++TI
Sbjct: 44 NFLRSKEYWSLVDDGVARLGSGGPLTAAEQKTPYEMMLKYLKVKNYLLHAIDRKIIETIL 103
Query: 88 KKDTAKEIWDAMKKKFEG 105
+K+T K+IW +M+ K +G
Sbjct: 104 EKNTLKKIWASMRGKDKG 121
>gi|356507050|ref|XP_003522284.1| PREDICTED: uncharacterized protein LOC100782062 [Glycine max]
Length = 430
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 10/223 (4%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W M ++M S + W VE Y+ P + M A K
Sbjct: 1 MEGEASFSHITLPIFDGENYDMWEAKMQSYMESLDLWDAVEEDYEIYPLPKNPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS---EEAEVKEDEVK 175
REFE MK E + + K+L + K + S+E +KD+ ++ ++ E +
Sbjct: 120 REFELQRMKESETIKEYLNKLL-GIANKIKLLGTSLENTKDLSKITLVEVLHALQAQEQR 178
Query: 176 TLLGAEEEEEAGKFAEHWTTS---RKGSSNCHSTWKAQDVSFR 215
L+ + E A+H +K CH K FR
Sbjct: 179 RLMRQDRVVEGALPAKHQNKGKDKKKNYPPCHHCGKKGHAPFR 221
>gi|357515159|ref|XP_003627868.1| hypothetical protein MTR_8g039380 [Medicago truncatula]
gi|355521890|gb|AET02344.1| hypothetical protein MTR_8g039380 [Medicago truncatula]
Length = 91
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 60/112 (53%), Gaps = 28/112 (25%)
Query: 6 NFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKL 65
NF IP+F G YD+W L G+ K+ E L
Sbjct: 8 NFVHYIIPKFDGRYDYWRKL---------------------RHGA-------KLIKEQML 39
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
DLK KNYLFQAI R +L TI +DT+K IWD+MK+K +G+ RVK++QLQAL
Sbjct: 40 MDLKAKNYLFQAISRDVLQTILNQDTSKNIWDSMKQKLQGSNRVKRAQLQAL 91
>gi|224136141|ref|XP_002327391.1| predicted protein [Populus trichocarpa]
gi|222835761|gb|EEE74196.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS A P F G +Y W++ M+ ++ + + W VE YD P + K
Sbjct: 1 MEAETSFSSIAPPVFNGDNYQIWAVRMETYLEALDLWEAVEEDYDVPVLPNNPTMTQIKT 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E+K K K K LF A+ TI I + TAK IWD +K+++ G+ R++ Q+ L R
Sbjct: 61 HKEMKTKKSKAKACLFAAVSTTIFTRIMSRKTAKSIWDYLKEEYAGDERIRGMQVLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEK 146
+FE +MK E D +IVEKIL T+ E+
Sbjct: 121 DFELQKMKESETIKEYLDRLLGIANKIRLLGSEFSDSRIVEKILVTVPER 170
>gi|77554492|gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 904
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 47/236 (19%)
Query: 4 EGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL 63
EG S P +Y W++ M+ M ++ W +E DE ++
Sbjct: 436 EGIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAV--------------DI 481
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K KD + + LF A+ +L I KK TAKE+W+++K +F G RVKK+++Q L+ +F+
Sbjct: 482 K-KDKQARACLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKA 540
Query: 124 LEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
L MK E +D + V+K+L ++ +KF ++ +IE+ D+
Sbjct: 541 LHMKDTESIDEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDL 600
Query: 161 DSLSEEAEVKEDEVKTLLGAEEE---EEAGKFAEHWTTSRKGSSNCHSTWKAQDVS 213
DS+ DE L A EE + K EH + +S S K D S
Sbjct: 601 DSMP------FDEAIGRLKAYEERIRKRDDKNGEHLLFTSGDTSGGRSRVKKPDRS 650
>gi|224119568|ref|XP_002318106.1| predicted protein [Populus trichocarpa]
gi|222858779|gb|EEE96326.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M SE +F+ + P F G ++ W++ M+ + + + W VE Y+ P + K
Sbjct: 1 MDSESSFTHISPPIFNGENFQLWAVRMETHLEALDLWEAVEEDYEVPPLPNNPTMTQIKS 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K K LF A+ TI I +AK++WD +KK++ G+ R++ Q L R
Sbjct: 61 HKERKTKKSKAKACLFAAVSTTIFTRIMSLQSAKDVWDYLKKEYAGDERIRGMQSLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E D +IVEK+L T+ EK+ + ++E
Sbjct: 121 EFELQRMKDSETIKEYSDKLMGIANRVRLLVTSFADSRIVEKLLVTVPEKYEASITTLEN 180
Query: 157 SKDIDSLS 164
+KD+ ++
Sbjct: 181 TKDLSKIT 188
>gi|147821989|emb|CAN74754.1| hypothetical protein VITISV_015105 [Vitis vinifera]
Length = 188
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 23/170 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+ EIW+ +K++++G+ R+K + L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSXAEIWEYLKEEYKGDERIKNMXVMNLIREFEMKKMRESDAVKDYAA 136
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 186
>gi|147767220|emb|CAN62449.1| hypothetical protein VITISV_044204 [Vitis vinifera]
Length = 571
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 23/176 (13%)
Query: 12 IPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK 71
+P + M M +++ + W VE Y+ P G+ A K+ E + + K K
Sbjct: 44 VPPLGANPTVAQMKMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAK 103
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--- 128
LF A+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 104 ACLFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDA 163
Query: 129 ------------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 164 VKDYAAQLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 219
>gi|356506547|ref|XP_003522041.1| PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Glycine
max]
Length = 710
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 34/189 (17%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E +FS +P F G +YD W + M ++M S + W VE Y+ L+ + M
Sbjct: 1 MEGEASFSHITLPIFDGENYDIWEVKMQSYMESLDLWDAVEEDYE-----IYLLPENPTM 55
Query: 60 TD-----ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL 114
T E K+K+ K ++ LF + I I + K IWD +K+++ G+ R++ Q+
Sbjct: 56 TQIKNHKERKMKNAKARSCLFTGVSLMIFTRIMTLKSPKAIWDYLKEEYAGDDRIRSMQV 115
Query: 115 QALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIV 151
LRREFE M+ E D KIVEKI+ T++E++ +
Sbjct: 116 LNLRREFELQRMEESETIKEYSNKLLGIANKIKLLGSDFADSKIVEKIMVTVSERYEASI 175
Query: 152 CSIEESKDI 160
S+E + D+
Sbjct: 176 ASLENTNDL 184
>gi|147854128|emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 59/181 (32%)
Query: 8 SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
SQPAIP F G Y+ WS+ M +S++ W LVE GY P D ++ + K K
Sbjct: 12 SQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYP-------DEEARLKENTK-K 63
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D K ++ QA G+++V +LQ+LRR+FETL M
Sbjct: 64 DSKALFFIQQA---------------------------GSSKVITVKLQSLRRDFETLHM 96
Query: 127 KSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K+GE D +V K+LR+LT KF+ +V +IEESKD+ +
Sbjct: 97 KNGESVQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTY 156
Query: 164 S 164
S
Sbjct: 157 S 157
>gi|224136145|ref|XP_002327392.1| predicted protein [Populus trichocarpa]
gi|222835762|gb|EEE74197.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS A P F G +Y W++ M+ ++ + + W VE YD P + K
Sbjct: 1 MEAETSFSSIAPPVFNGDNYQIWAVRMETYLEALDLWEAVEEDYDVPVLPNNPTMTQIKT 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E+K K K K LF A+ TI I + TAK IWD +K+++ G+ R++ Q+ L R
Sbjct: 61 HKEMKTKKSKAKACLFAAVSTTIFTRIMSRKTAKSIWDYLKEEYAGDERIRGMQVLNLIR 120
Query: 120 EFETLEMKSGEEDVKIVEKIL------RTLTEKFND 149
+FE +MK E + ++++L R L +F+D
Sbjct: 121 DFELQKMKESETIKEYLDRLLGIANKIRLLGSEFSD 156
>gi|356562080|ref|XP_003549302.1| PREDICTED: uncharacterized protein LOC100811374 [Glycine max]
Length = 627
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 7 FSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQKMTDELK 64
FS +P F G +YD W + M ++M S + W VE Y+ P + M A K E K
Sbjct: 36 FSHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIYPLPENPTM-AQIKNHKERK 94
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LRREFE
Sbjct: 95 MKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLRREFELQ 154
Query: 125 EMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEVKTLLGA 180
MK E + K+L + K + S+E +KD+ ++ AEV + E + L+
Sbjct: 155 RMKESETIKEYSNKLL-GIANKIKLLGTSLENTKDLSKIT-LAEVLHALQAQEQRRLMRQ 212
Query: 181 EEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSF----RERVDCN 221
E A+H +K CH K F R CN
Sbjct: 213 GRVVEGALPAKHHEDKKKNYPPCHHCGKKGHAPFKCWRRPDAKCN 257
>gi|147801877|emb|CAN70616.1| hypothetical protein VITISV_006246 [Vitis vinifera]
Length = 1011
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M++ N S I F G HY W + M ++RS+ W +V + + P G+ A K
Sbjct: 1 MSTSSNTSS-VIAVFNGEHYHIWVVKMRFYLRSQGLWNVVMSEANPPPLGANPTVAQMKA 59
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLK K L + I I DT K++WD ++ +FEG+ RVK +L L+R
Sbjct: 60 YEEKKLKKDKAITCLHSGLADHIFTKIMDLDTLKQVWDKLQGEFEGSNRVKIVKLLTLKR 119
Query: 120 EFETLEMKSGEED-------VKIVEKILRTLTEKFNDIVCSIEESKDIDSLS-----EEA 167
EFE ++MK E + +V ++ + +KF + +IE + D+ SL+ +
Sbjct: 120 EFEFMKMKDNESVKDYSSRLMDVVNQMRLLVPQKFEAKISTIEATCDLQSLTIAELISKL 179
Query: 168 EVKEDEVKTLLGAEEEEEAGKFAEH 192
VKE V L+ +E E A H
Sbjct: 180 HVKEQRV--LMRGDEAIEGAFQANH 202
>gi|147834280|emb|CAN76402.1| hypothetical protein VITISV_025682 [Vitis vinifera]
Length = 472
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W +VE Y+ P G+ A K+ E K + K K LF
Sbjct: 17 NYETWAVRMTIHLQALDVWEVVEENYEVPPLGANPTXAQMKLYKERKTRKXKXKACLFAX 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ +IL I K D A EIW+ +K++++G+ R+K ++ L EFE +MK
Sbjct: 77 VSPSILIKIMKIDLAXEIWEYLKEEYKGDERIKNMKVMNLIXEFEMKKMKESNAIKDYGA 136
Query: 132 ------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 137 QLLSIGDKKIVQKILVTLPEKYEATIFSLENSKDLSTIS 175
>gi|224077812|ref|XP_002335784.1| predicted protein [Populus trichocarpa]
gi|222834753|gb|EEE73216.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS + P F G +Y W++ M+ ++ + + W +E Y+ + A K
Sbjct: 1 MEAETSFSHISSPIFDGENYQLWAVKMETYLEAMDLWEAIEEDYEVHPLPNNPTVAQIKN 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K + K K LF A+ TI I +AK++WD +KK++ G+ R++ Q L R
Sbjct: 61 HKERKTRKSKAKACLFAAVSTTIFTRIMSLKSAKDVWDYLKKEYAGDDRIRGMQSLNLIR 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E D KIVEKIL T+ E++ + ++E
Sbjct: 121 EFELQMMKDSETIKEYSDKLLGIVNKVRLLGTLFSDCKIVEKILVTMPERYEASITTLEN 180
Query: 157 SKDIDSLS 164
+KD+ ++
Sbjct: 181 TKDLSKIT 188
>gi|147859057|emb|CAN80419.1| hypothetical protein VITISV_008670 [Vitis vinifera]
Length = 572
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 23/102 (22%)
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE----- 130
+A+DR+IL+TI K T K+IWD+MK+KF+G RVK+ LQALR+EFE L + GE
Sbjct: 24 KALDRSILETILNKKTTKDIWDSMKQKFQGTTRVKRGDLQALRKEFEILHINLGETVNEN 83
Query: 131 ------------------EDVKIVEKILRTLTEKFNDIVCSI 154
++ IVEKILR++T KF+ + +
Sbjct: 84 FSCTLAIANKKKVNGEDKRNIAIVEKILRSITSKFDYVASKV 125
>gi|147778323|emb|CAN76284.1| hypothetical protein VITISV_041019 [Vitis vinifera]
Length = 875
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 32/187 (17%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
MTSE + + A P ++ M+ ++ + + W V Y+ P A K+
Sbjct: 1 MTSEASLNALAPP---------AVRMEGYLDASDLWEAVSEEYEVPPLSDNPTMAQIKLH 51
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+E + + K K LF A+ TI I TA EIW+ +KK++EGN R K Q+ L RE
Sbjct: 52 NERRQRKSKAKASLFAAVSSTIFTKIMTLKTANEIWNFLKKEYEGNERDKGMQVLNLIRE 111
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
FE MK E D +IV+KI T+ EKF + S+E S
Sbjct: 112 FEMQRMKESETIKDYSDKLLSIVNKVKLLGTDFSDSRIVQKIFITILEKFETTISSLENS 171
Query: 158 KDIDSLS 164
KD+ +++
Sbjct: 172 KDVSNIT 178
>gi|4335731|gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 27/184 (14%)
Query: 8 SQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQKMT--DEL 63
S IP F G YD WS+ M R+++ W +VE G EP + + T +E
Sbjct: 5 SHQVIPIFDGEKYDFWSIKMATIFRTRKLWSVVEEGVPVEPVQAEETPETARAKTLREEA 64
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
D L A+ I I ++KE WD +K +++G+ +V+ +LQ+LRRE+E
Sbjct: 65 VTNDTMALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYEN 124
Query: 124 LEM---------------------KSGEE--DVKIVEKILRTLTEKFNDIVCSIEESKDI 160
L+M GE+ + ++++KIL +L KF+ IV +E+++D+
Sbjct: 125 LKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDL 184
Query: 161 DSLS 164
D+L+
Sbjct: 185 DALT 188
>gi|147807281|emb|CAN75261.1| hypothetical protein VITISV_041144 [Vitis vinifera]
Length = 654
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 22 WSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRT 81
W++ M ++RS+ W +V + D P G+ A K +E KLK K L +
Sbjct: 23 WAVKMRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKAYEEEKLKKDKAITCLHSGLADH 82
Query: 82 ILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE---------- 131
I I +T K +WD ++ +FEG+ RVK +L L+REFE ++MK E
Sbjct: 83 IFTKIMNLETPKLVWDKLQGEFEGSERVKTVRLLTLKREFELMKMKDDESVKDYSGRLMD 142
Query: 132 -------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
D K+VEKI+ ++ +KF + +IEES D+ +L
Sbjct: 143 VVNQIQLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEESCDLQTL 187
>gi|147839869|emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
Length = 2041
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MT N S IP F G HY W++ M ++RS+ W +V + + P G+ A K
Sbjct: 782 MTPSSNISS-VIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEANPPPLGANPTVAQMKA 840
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E KLK K L + I I +T K++WD ++ +FEG+ RVK +L L+R
Sbjct: 841 YEEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQVWDKLQGEFEGSERVKNVRLLTLKR 900
Query: 120 EFETLEMKSGEEDVK--------IVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKE 171
EFE ++MK +E VK +V + +R L E F D ++ K+ +L + K
Sbjct: 901 EFELMKMKD-DESVKDYSGRLMDVVNQ-MRLLGEAFTD-----QKGKNSGNLQGKKFFKN 953
Query: 172 DEVKTLLGAEEEEEAGKFA 190
K AE GKF
Sbjct: 954 SRGK----AEGSSRKGKFP 968
>gi|13940610|gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
Length = 1217
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 30/167 (17%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W + + M + W +E PA+G+ + D KD K K++L Q+
Sbjct: 28 NYTSWVIRVQAMMEDQGIWEAIE-----PAAGAAV-DPR---------KDKKAKSHLLQS 72
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +L + KK +AKE+WD +K +F G RV+ ++LQ L+ EF ++ M++GE
Sbjct: 73 LPEDLLMQVAKKRSAKEVWDCLKTRFVGVDRVRDARLQTLKGEFTSMVMEAGETLDQYAG 132
Query: 131 --------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
D +V+K+ T+ EKF +V IE+ D+D++ E V
Sbjct: 133 RITTMGWLNDAAMVKKLFDTVPEKFVSLVAGIEQFYDVDTMPFEEAV 179
>gi|147860686|emb|CAN83567.1| hypothetical protein VITISV_030380 [Vitis vinifera]
Length = 567
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 23/162 (14%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M +++ + W VE Y+ P G+ A K+ E + + K K LF A+ +I
Sbjct: 1 MTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAAVSPSIFIK 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS----------------- 128
I K D+A EIW+ +K++++G R+K Q+ L REFE +M+
Sbjct: 61 IMKIDSAAEIWEYLKEEYKGXERIKNMQVMNLIREFEMKKMRESDAVKDYAAQLLSIADK 120
Query: 129 ----GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 121 VRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 162
>gi|147802350|emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
Length = 1269
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 26/193 (13%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M ++RS+ W +V + D P G+ A K +E KLK KV L + I
Sbjct: 12 MRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKAYEEEKLKKDKVITCLHSGLADHIFTK 71
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE---------DV--- 133
I +T K++WD ++ +F+G+ RVK +L L+REFE ++MK E DV
Sbjct: 72 IMNLETPKQVWDKLQGEFDGSERVKNVRLLTLKREFELMKMKDDESVKDYSGRLMDVVNQ 131
Query: 134 -----------KIVEKILRTLTEKFNDIVCSIEESKDIDSLS---EEAEVKEDEVKTLLG 179
K+VEKI+ ++ +KF + IEES D+ +L+ +++ E + L+
Sbjct: 132 MRLLGEAFTNQKVVEKIMVSVPQKFEAKISVIEESCDLQTLTIVELTSKLHAQEQRVLMR 191
Query: 180 AEEEEEAGKFAEH 192
+E E A H
Sbjct: 192 GDEATEGAFQANH 204
>gi|356545209|ref|XP_003541037.1| PREDICTED: uncharacterized protein LOC100817353 [Glycine max]
Length = 494
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 26/189 (13%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W VE Y+ P + M K
Sbjct: 1 MEGETSFSHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIYPLPENPTM-TQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMICIRIMTLKSPKSIWDYLKEEYAGDDRIRSMQVLDLR 119
Query: 119 REFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIE 155
REFE M+ E D +IV+KIL T+ E++ + S++
Sbjct: 120 REFELQRMEESETIKEYSNKLLGIANKIKLLGSDFADSRIVDKILVTVPERYEASIASLK 179
Query: 156 ESKDIDSLS 164
+KD+ ++
Sbjct: 180 NTKDLSKIT 188
>gi|147798588|emb|CAN74390.1| hypothetical protein VITISV_023272 [Vitis vinifera]
Length = 568
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M +++ + W +E Y+ P G+ A K+ E + + K K LF A+ +I
Sbjct: 1 MTVHLQALDVWEAMEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAAVSPSIFIK 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS----------------- 128
I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 61 IMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAAQLLSIADK 120
Query: 129 ----GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 121 VRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 162
>gi|356519110|ref|XP_003528217.1| PREDICTED: uncharacterized protein LOC100794492 [Glycine max]
Length = 524
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E +FS +P F G +YD W + M ++M S + W VE Y+ A K
Sbjct: 1 MEGEASFSHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIYPLPENPTTAQIKN 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K+K K ++ LF + + I I + K IWD +K+++ + R++ Q+ LRR
Sbjct: 61 HKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYARDDRIRSMQVLNLRR 120
Query: 120 EFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEVK 175
EFE MK E + K+L + K + S+E +KD+ ++ AEV + E +
Sbjct: 121 EFELQRMKESETIKEYSNKLL-GIANKIKLLGTSLENTKDLSKIT-LAEVLHALQAQEQR 178
Query: 176 TLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
L+ + E A+H +K C K FR
Sbjct: 179 RLIRLDRVVEGVLPAKHHEDKKKNYPPCQHCSKKGHAPFR 218
>gi|356498917|ref|XP_003518293.1| PREDICTED: uncharacterized protein LOC100793334 [Glycine max]
Length = 458
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M + W +VE Y+ P + M K
Sbjct: 1 MEGEASFSHITLPIFDGKNYDLWEVKMQSYMEFLDLWDVVEEDYEIYPLPENPTM-TQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IW +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWHYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDID--SLSEEAEV-KEDEVK 175
REFE MK E + K+L + K + S+E +KD+ +L+E V + E +
Sbjct: 120 REFELQRMKESETIKEYSNKLL-GIANKIKLLGTSLENTKDLSKITLTEVLHVLQPQEQR 178
Query: 176 TLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSF----RERVDCN 221
L+ + E A+H +K S C K F R CN
Sbjct: 179 RLMRQDRVVEGALPAKHHEDKKKNYSPCQHYGKKGHAPFGCWRRPDAKCN 228
>gi|356544818|ref|XP_003540844.1| PREDICTED: uncharacterized protein LOC100805247 [Glycine max]
Length = 390
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 42/247 (17%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +F +P F G +YD W + M ++M S + W VE Y+ P + M K
Sbjct: 1 MEGEASFFHITLPIFDGQNYDLWEVKMQSYMESLDLWDAVEEDYEIYPLPENPTM-TQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ + R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKVIWDYLKEEYARDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIE 155
REFE MK E D +IVEKIL T+ E++ + S+E
Sbjct: 120 REFELQMMKESETIKEYSNKLLGIANKIKLLGSDFADSRIVEKILVTVPERYEASIASLE 179
Query: 156 ESKDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
++KD+ ++ AEV L A + +E + W R+ + C+ K +
Sbjct: 180 KTKDLSKIT-LAEV--------LHALQAQEQRRLMRCW---RRPDAKCN---KCNQIG-H 223
Query: 216 ERVDCNN 222
E V C N
Sbjct: 224 EAVICPN 230
>gi|356497812|ref|XP_003517751.1| PREDICTED: uncharacterized protein LOC100782526 [Glycine max]
Length = 421
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 10/217 (4%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W VE Y+ P + M A K
Sbjct: 1 MEGEASFSHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ + R++ QL LR
Sbjct: 60 YHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYARDDRIRSMQLLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLL 178
REFE M+ E + K+L + D+ I ++ + +L + E + L+
Sbjct: 120 REFELQRMQESETIKEYSNKLLGIANKNTKDL-SKITLAEVLHALQAQ------EQRRLM 172
Query: 179 GAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ E A+H RK CH K FR
Sbjct: 173 RQDRVVEGALPAKHHEDKRKNYPPCHHCGKKGHAPFR 209
>gi|158578605|gb|ABW74576.1| pol polyprotein [Boechera divaricarpa]
Length = 708
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 43/184 (23%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY-DEPASGSVLMDAHQKMT--DEL 63
Q IP F G YD W + M +++ + W +VE G ++PA G +A Q T +E
Sbjct: 5 PQQVIPIFNGERYDFWRIKMTTILKTIKLWTVVEEGVPNQPAQGDHSPEAVQSKTRWEEA 64
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
KDL T L ++ KE WDA+ +F+G+ +V+ LQ+LRRE+E
Sbjct: 65 STKDL------------TALQILQ----TKEAWDALMSEFQGSPQVRMINLQSLRREYEN 108
Query: 124 LEMKS---------------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDI 160
L+M GE+ D +IV+KIL L +F IV +E++KD+
Sbjct: 109 LKMSEEDNIKVFTEKLIDLGNQLRVHGEKKTDYQIVQKILIYLPARFTSIVAVMEQTKDL 168
Query: 161 DSLS 164
SLS
Sbjct: 169 PSLS 172
>gi|356498220|ref|XP_003517951.1| PREDICTED: uncharacterized protein LOC100815131 [Glycine max]
Length = 777
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDE-PASGSVLMDAHQK 58
M E +FS +P F +YD W + M ++M S + W VE Y+ P + M A K
Sbjct: 1 MEGEASFSHITLPIFDSENYDLWEVKMQSYMESLDLWDAVEEDYEIFPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRLRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEV 174
REFE M+ E + K+L + K + S E +KD+ ++ AEV + E
Sbjct: 120 REFELQRMQESETIKEYSNKLL-GIANKIKLLGTSFENTKDLSKIT-LAEVLHALQAQEQ 177
Query: 175 KTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR--ERVD--CN 221
+ L+ + E A+H +K C K FR R D CN
Sbjct: 178 RRLMRQDRVVEGALPAKHHEDKKKNYPPCQHCGKKGHAPFRCWRRPDAKCN 228
>gi|356541884|ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1534
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W +VE Y+ P + M K
Sbjct: 1 MEGEASFSHITLPIFEGKNYDFWEVKMQSYMESLDLWDVVEKDYELYPLPENPTM-PQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IW+ +K+++ + R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWNYLKEEYAEDDRIRNMQVLNLR 119
Query: 119 REFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIE 155
REFE M+ + D +IVEKIL T++E++ + S+E
Sbjct: 120 REFELQRMEESDTIKEYPNKLLGIANKIKLLGSDFVDSRIVEKILVTVSERYEASIASLE 179
Query: 156 ESKDIDSLS 164
+K++ ++
Sbjct: 180 NTKNLSKIA 188
>gi|29423279|gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 42/184 (22%)
Query: 18 HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELK----------- 64
+Y++W M F++S W V G++ P ++D K TDELK
Sbjct: 20 NYEYWKARMVAFLKSLDSRTWKAVIKGWEHPK----MLDTEGKPTDELKPEEDWTKEEDE 75
Query: 65 --LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
L + K N LF +D+ I I AK+ W+ +K EG ++VK S+LQ L +FE
Sbjct: 76 LALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSRLQLLATKFE 135
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
L+MK E D K+V KILR+L ++F+ V +IEE++D
Sbjct: 136 NLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQD 195
Query: 160 IDSL 163
I ++
Sbjct: 196 ICNM 199
>gi|147770954|emb|CAN76244.1| hypothetical protein VITISV_023380 [Vitis vinifera]
Length = 454
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 31/165 (18%)
Query: 27 DNFMRSKEYWGL----VETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTI 82
DN+ E W + VE Y+ P G+ A K+ E + + K K LF A+ +I
Sbjct: 16 DNY----ETWAVRMTAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAAVSPSI 71
Query: 83 LDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS-------------- 128
I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 72 FIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAAQLLSI 131
Query: 129 -------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 132 ADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 176
>gi|356537331|ref|XP_003537181.1| PREDICTED: uncharacterized protein LOC100802737 [Glycine max]
Length = 406
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +F +P F G +YD W + M ++M S + W VE Y+ P + M A K
Sbjct: 1 MEGEASFFHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEV 174
REFE M+ E + K+L + K + S+E +KD+ ++ AEV + E
Sbjct: 120 REFELQRMQESETLKEYSNKLL-GIANKIKLLGTSLENTKDLLKIT-LAEVLHALQAQEQ 177
Query: 175 KTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ L+ + E A+H ++ C K FR
Sbjct: 178 RRLMRKDRVVEGALPAKHHEDKKENYPPCQHCGKKGHAPFR 218
>gi|147828228|emb|CAN66574.1| hypothetical protein VITISV_016962 [Vitis vinifera]
Length = 416
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MTSE + + A P F G +Y W++ M+ ++ + + W V Y+ P K+
Sbjct: 1 MTSEASLNALAPPVFDGINYQVWAVRMEAYLDASDLWEAVSEEYEVPPLSDNPTMTQIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E + + K K LF A+ TI I T EIW+ +KKK+EGN RVK Q+ L R
Sbjct: 61 HNERRQRKSKAKASLFAAVSSTIFTRIMTLKTTNEIWNFLKKKYEGNERVKGMQVLNLIR 120
Query: 120 EFETLEMKSGE 130
EFE MK E
Sbjct: 121 EFEMQMMKESE 131
>gi|115474597|ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|215701150|dbj|BAG92574.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
+S FS P + +Y W + + M + W +E PA+G V +D
Sbjct: 16 SSGSAFSYPQL--TATNYTSWCIRVQAMMEDQGVWDAIE-----PAAG-VAVDPR----- 62
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
+D K K++L Q++ +L + KK +AKE+WD +K +F G RV++++LQ L+ EF
Sbjct: 63 ----RDKKSKSHLLQSLPEDLLMQVAKKRSAKEVWDCLKTRFVGADRVREARLQTLKGEF 118
Query: 122 ETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESK 158
+ M+ GE D IV+K+ T+ EKF +V IE+
Sbjct: 119 GAMVMEPGETLDQYAGRITAMSVRHSVLGSTLSDSAIVKKLFDTVPEKFISLVAGIEQFY 178
Query: 159 DIDSLSEEAEV 169
+ID++ E V
Sbjct: 179 EIDNMPFEEAV 189
>gi|29423270|gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 42/181 (23%)
Query: 18 HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELK----------- 64
+Y++W M F++S W V G++ P ++D K TDELK
Sbjct: 20 NYEYWKARMVAFLKSLDSRTWKAVIKGWEHPK----MLDTEGKPTDELKPEEDWTKEEDE 75
Query: 65 --LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
L + K N LF +D+ I I AK+ W+ +K EG ++VK S+LQ L +FE
Sbjct: 76 LALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISRLQLLATKFE 135
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
L+MK E D K+V KILR+L ++F+ V +IEE++D
Sbjct: 136 NLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQD 195
Query: 160 I 160
I
Sbjct: 196 I 196
>gi|224120898|ref|XP_002330853.1| predicted protein [Populus trichocarpa]
gi|222872675|gb|EEF09806.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRF-VGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E +FS + P F +Y W++ M ++ + + W +E YD P + A K
Sbjct: 1 MEVEASFSHISSPIFDRENYQLWAVRMKTYLEALDLWEAIEKDYDVPPLPNNPTMAQIKS 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K K LF AI TI +AK++WD +KK++ G+ +++ Q L++
Sbjct: 61 HKERKTKQSKAKVCLFAAISTTIFTRNMSLKSAKDVWDYLKKEYVGDEKIRGMQNLNLKQ 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E D +I+EK L T+ EK+ ++ ++E
Sbjct: 121 EFELQRMKESETIKEYSNRLLGIVNRVKLLGISFTDFRIIEKNLVTVPEKYKALITTLEN 180
Query: 157 SKDIDSLS 164
+KD+ ++
Sbjct: 181 TKDLSKIT 188
>gi|218201855|gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
+S FS P + +Y W + + M + W +E PA+G V +D
Sbjct: 16 SSGSAFSYPQL--TATNYTSWCIRVQAMMEDQGVWDAIE-----PAAG-VAVDPR----- 62
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
+D K K++L Q++ +L + KK +AKE+WD +K +F G RV++++LQ L+ EF
Sbjct: 63 ----RDKKAKSHLLQSLPEDLLMQVAKKRSAKEVWDCLKTRFVGADRVREARLQTLKGEF 118
Query: 122 ETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESK 158
+ M+ GE D +V+K+ T+ EKF +V IE+
Sbjct: 119 GAMVMEPGETLDQYAGRITAMSVRHSALGSTLSDSAMVKKLFDTVPEKFISLVAGIEQFY 178
Query: 159 DIDSLSEEAEV 169
+ID++ E V
Sbjct: 179 EIDNMPFEEAV 189
>gi|108708653|gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W + + M + W +E PA+G+ + D KD KVK++L Q+
Sbjct: 22 NYTSWVIRVQAMMEDQGVWEAIE-----PAAGAAV-DPR---------KDKKVKSHLLQS 66
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ +L + KK TAKE+WD +K +F G +V+ ++LQ L+ EF ++ M++GE
Sbjct: 67 LPEDLLMQVAKKRTAKEVWDCLKTRFVGADKVRDARLQTLKGEFASMVMEAGESLDQYAG 126
Query: 132 -----------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
D +V+K+ T+ EKF +V IE+ ++D + E V
Sbjct: 127 RITMMGVRHSALGATLNDAAMVKKLFDTVPEKFVSLVVGIEQFYNVDDMPFEEAV 181
>gi|224093834|ref|XP_002310012.1| predicted protein [Populus trichocarpa]
gi|222852915|gb|EEE90462.1| predicted protein [Populus trichocarpa]
Length = 260
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 26/189 (13%)
Query: 1 MTSEGNFSQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M +E +FSQ A P F G Y W++ M+ ++ + W VE Y+ P + +M A +
Sbjct: 1 MEAEASFSQIAPPIFDGESYQLWAVKMETYLEAFNLWKAVEEDYEVHPLPTNPIM-AQIR 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K + K K LF + TI I AK++WD +KK++ G+ R++ Q L
Sbjct: 60 NHKERKTRKSKAKACLFDVVSTTIFTRIMSLKLAKDVWDYLKKEYAGDERIRGMQSLNLI 119
Query: 119 REFETLEMK-SGE----------------------EDVKIVEKILRTLTEKFNDIVCSIE 155
REFE MK SG D IVEKI+ T+ +K+ + +E
Sbjct: 120 REFELQRMKESGTIKEYSNRLLGIVNKVRLLGKSFTDSTIVEKIMVTVPKKYEASITILE 179
Query: 156 ESKDIDSLS 164
+KD+ ++
Sbjct: 180 NTKDLSKIT 188
>gi|30017513|gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1283
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W + + M + W +E PA+G+ + D KD KVK++L Q+
Sbjct: 22 NYTSWVIRVQAMMEDQGVWEAIE-----PAAGAAV-DPR---------KDKKVKSHLLQS 66
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ +L + KK TAKE+WD +K +F G +V+ ++LQ L+ EF ++ M++GE
Sbjct: 67 LPEDLLMQVAKKRTAKEVWDCLKTRFVGADKVRDARLQTLKGEFASMVMEAGESLDQYAG 126
Query: 132 -----------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
D +V+K+ T+ EKF +V IE+ ++D + E V
Sbjct: 127 RITMMGVRHSALGATLNDAAMVKKLFDTVPEKFVSLVVGIEQFYNVDDMPFEEAV 181
>gi|29423282|gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 43/197 (21%)
Query: 5 GNFSQPAIPRFVGHYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
G ++P I +Y++W M F++S W V G++ P ++D K T+E
Sbjct: 8 GPVNRPPILDGT-NYEYWKARMVAFLKSLDSRTWKAVIKGWEHPK----MLDTEGKPTNE 62
Query: 63 LK-------------LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARV 109
LK L + K N LF +D+ I I AK+ W+ +K EG ++V
Sbjct: 63 LKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKV 122
Query: 110 KKSQLQALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEK 146
K S+LQ L +FE L+MK E D K+V KILR+L ++
Sbjct: 123 KMSRLQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLPKR 182
Query: 147 FNDIVCSIEESKDIDSL 163
F+ V +IEE++DI ++
Sbjct: 183 FDMKVTAIEEAQDICNM 199
>gi|356569892|ref|XP_003553128.1| PREDICTED: uncharacterized protein LOC100806996 [Glycine max]
Length = 585
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 7 FSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDE-PASGSVLMDAHQKMTDELK 64
FS +P F G +YD W + M ++M S + W VE Y+ P + M A K E K
Sbjct: 179 FSHITLPIFDGENYDLWEVKMQSYMESLDLWDAVEEDYEIFPLPENPTM-AQIKNHKERK 237
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR+EFE
Sbjct: 238 MKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLRKEFELQ 297
Query: 125 EMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEVKTLLGA 180
M+ E + K+L + K + S+E +KD+ ++ AEV + E + L+
Sbjct: 298 RMQESETIKEYSNKLL-GIANKIKLLGTSLENTKDMSKIT-LAEVLHALQAQEQRRLMRQ 355
Query: 181 EEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSF----RERVDCN 221
+ E A+H +K C K F R CN
Sbjct: 356 DRVVEGALPAKHHEDKKKNYPPCQHCGKKGHAPFKCWRRPNAKCN 400
>gi|224144265|ref|XP_002325240.1| predicted protein [Populus trichocarpa]
gi|222866674|gb|EEF03805.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 37/191 (19%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD---------- 61
P+F G +YD W++ M + + + W ++E G S V + + + ++
Sbjct: 14 PQFNGTNYDFWAVKMKTILIAFDLWDVIEAGIQSHQSPEVAIGSGDEESEAEQTTLRTST 73
Query: 62 ---ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K+ K + + A+ + IR + TAK WD + ++F G+ +V+ +LQA+R
Sbjct: 74 TSREDKIKNAKALSLIQGALTDDLFPRIRNEKTAKGAWDILSREFRGDKKVRAVKLQAVR 133
Query: 119 REFETLEM--------------------KSGEEDV---KIVEKILRTLTEKFNDIVCSIE 155
+FE L M KS EDV +IV+K+L +L+ ++ IV IE
Sbjct: 134 ADFEYLRMSENESLDGYLAKFFATVNNLKSLGEDVPENRIVQKLLMSLSRRYKSIVSIIE 193
Query: 156 ESKDIDSLSEE 166
E++D+D L E
Sbjct: 194 ETRDLDVLRAE 204
>gi|356522712|ref|XP_003529990.1| PREDICTED: uncharacterized protein LOC100817057 [Glycine max]
Length = 764
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 1 MTSEGNFSQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYD---EPASGSVLMDAH 56
M E +F +P F G YD W + M ++M S + W VE Y+ P + +++ +
Sbjct: 1 MEGETSFFHITLPIFDGEKYDLWEVKMQSYMESLDLWDAVEEDYEISPRPENPTMVQIKN 60
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
K E K+K V++ LF + + I I + K IWD +K+++ G+ R++ Q+
Sbjct: 61 HK---ERKMKKANVRSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYVGDDRIRNMQVLN 117
Query: 117 LRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEA---EVKEDE 173
LRREFE M+ + + K+L + K + S+E KD+ ++ ++ E
Sbjct: 118 LRREFELQRMEESDIIKEYSNKLL-GIANKIKLLGTSLENIKDLSKITLAKVLHALQAQE 176
Query: 174 VKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ L+ E A+H +K CH K FR
Sbjct: 177 QRRLMRQNRVVEGALPAKHHEDKKKNYPPCHHCGKKGHAPFR 218
>gi|115441419|ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa Japonica Group]
Length = 278
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 4 EGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL 63
EG S P +Y W++ M+ M ++ W +E DE ++
Sbjct: 23 EGIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAV--------------DI 68
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K KD + + LF A+ +L I KK TAKE+W+++K +F G RVKK+++Q L+ +F+
Sbjct: 69 K-KDKQARACLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKA 127
Query: 124 LEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
L MK E +D + V+K+L ++ +KF ++ +IE+ D+
Sbjct: 128 LHMKDTESIDEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDL 187
Query: 161 DSLS 164
DS+
Sbjct: 188 DSMP 191
>gi|12039053|gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 52/89 (58%), Gaps = 23/89 (25%)
Query: 99 MKKKFEGNARVKKSQLQALRREFETLEMKSGE-----------------------EDVKI 135
MK+K++GN RV+ +QLQ LRR FE LEMK GE D K+
Sbjct: 1 MKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKV 60
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
VEKILRTL EKF +VC+IEES +I L+
Sbjct: 61 VEKILRTLVEKFTYVVCAIEESNNIKELT 89
>gi|224110302|ref|XP_002333113.1| predicted protein [Populus trichocarpa]
gi|222834904|gb|EEE73353.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 39/192 (20%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-----EPASGS---------VLMDAHQ 57
P+F G +YD W++ M + + + W +VE G + E A GS +++ A
Sbjct: 14 PQFNGTNYDFWAVKMKTVLIALDLWEVVEDGINSHQAPEIAGGSGDEESEADQIILHAST 73
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+E K+K+ K + + A+ + IR + TAK WD + ++F G+ +V+ +LQ +
Sbjct: 74 TSREE-KIKNAKALSLIQGALTDDLFPRIRNEKTAKGAWDILSREFRGDKKVRAVKLQGV 132
Query: 118 RREFETLEM--------------------KSGEEDV---KIVEKILRTLTEKFNDIVCSI 154
R +FE L M KS EDV +IV+K+L +L+ ++ IV I
Sbjct: 133 RADFEYLRMTESESLDGYLAKFFATINNLKSLGEDVSENRIVQKLLMSLSRRYKSIVSII 192
Query: 155 EESKDIDSLSEE 166
EE++D++ L E
Sbjct: 193 EETRDLEVLRAE 204
>gi|224102263|ref|XP_002312614.1| predicted protein [Populus trichocarpa]
gi|222852434|gb|EEE89981.1| predicted protein [Populus trichocarpa]
Length = 345
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M SE NFS + P F G +Y W++ M+ ++ + + W VE Y+ P + M K
Sbjct: 15 MDSETNFSHISTPIFNGENYQLWAVRMETYLEAMDLWEAVEEDYEILPLPNNPTM-TQIK 73
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K K K K LF A+ TI I +AK++W+ +K+++ G+ +++ Q L
Sbjct: 74 SHKERKTKKSKAKATLFAAVSTTIFTRIMSLKSAKDVWEYLKEEYAGDEKIRGMQSLNLI 133
Query: 119 REFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIE 155
REFE MK E D +IVEKIL T+ EK+ + ++E
Sbjct: 134 REFELQRMKDSETIKEYSDRLLGIANRVKLLGTSFLDSRIVEKILVTVPEKYEASITTLE 193
Query: 156 ESKDIDSLS------------EEAEVKEDEV--KTLLGAEEEEEAGKFAEHWTTSRKGSS 201
+KD+ S++ ++ +++D V L + E KF + K +S
Sbjct: 194 NTKDLSSITLTELLNALQAQEQKRLMRQDHVIEGALQAKFPDSERRKFGRKHQVAAKPTS 253
Query: 202 NCHSTWKAQDVSFRERVDCN 221
H K +F CN
Sbjct: 254 QGHGKGKFIKRNFPPCQHCN 273
>gi|224093224|ref|XP_002309841.1| predicted protein [Populus trichocarpa]
gi|222852744|gb|EEE90291.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 39/192 (20%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY-----DEPASGS---------VLMDAHQ 57
P+F G +YD W++ M+ + + + W +VE G E A GS +++ A
Sbjct: 14 PQFNGTNYDFWAVKMETVLIALDLWEVVEDGIKSHQAPEIAGGSGDEESEADQIILHAST 73
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+E K+K+ K + + A+ + IR + TAK WD + ++F G+ +V+ +LQ +
Sbjct: 74 TSREE-KIKNAKALSLIQGALTDDLFPRIRNEKTAKGAWDILSREFRGDKKVRAVKLQGV 132
Query: 118 RREFETLEM--------------------KSGEEDV---KIVEKILRTLTEKFNDIVCSI 154
R +FE L M KS EDV +IV+K+L +L+ ++ IV I
Sbjct: 133 RADFEYLRMTESESLDGYLAKFFATINNLKSLGEDVSENRIVQKLLMSLSRRYKSIVSII 192
Query: 155 EESKDIDSLSEE 166
EE++D++ L E
Sbjct: 193 EETRDLEVLRAE 204
>gi|224134332|ref|XP_002321793.1| predicted protein [Populus trichocarpa]
gi|222868789|gb|EEF05920.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 29/152 (19%)
Query: 39 VETGY---DEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI 95
VE Y D PA+ +V A K+ E K + K K L+ A+ TI I ++AK+I
Sbjct: 64 VEENYVVPDLPANPTV---AQLKIHREKKTRKSKAKACLYAAVSNTIFTRIMNLESAKDI 120
Query: 96 WDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-----------------------D 132
WD KK+++GN R K Q+ L REFE +MK E D
Sbjct: 121 WDYHKKEYQGNGRTKNMQVLILIREFEMQKMKETENINDYADKLLSIINKVRLLEKEFSD 180
Query: 133 VKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+IV+KIL T+ EK+ + S+EESKD+ ++S
Sbjct: 181 DRIVQKILVTMPEKYESKISSLEESKDLTNIS 212
>gi|356513818|ref|XP_003525606.1| PREDICTED: uncharacterized protein LOC100812570 [Glycine max]
Length = 413
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 14/227 (6%)
Query: 1 MTSEGNFSQPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G YD W + M ++M S + W VE Y+ P + M A K
Sbjct: 1 MKGEASFSHITLPIFDGEDYDLWEVKMQSYMESLDIWDAVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYTGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLL 178
REF+ M+ E + K+L + D+ I ++ + +L + E + L+
Sbjct: 120 REFKLQRMQESETIKEYSNKLLGIANKNTKDLS-KITLAEVLHALQAQ------EQRRLM 172
Query: 179 GAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSF----RERVDCN 221
+ E A+H +K CH K F R CN
Sbjct: 173 RQDRVVEGALPAKHHEDKKKNYPPCHHCGKKGHAPFKCWRRPDAKCN 219
>gi|449529720|ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226793 [Cucumis sativus]
Length = 407
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 46/222 (20%)
Query: 13 PRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK 71
P H Y W++ + + ++ W +E PA G+ + ++K KD K +
Sbjct: 6 PMLTPHNYTVWTIKAEAILNAQGVWEAIE-----PARGAEV---------DVK-KDKKAR 50
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE- 130
Y+ Q I +L I KK TAKEIWD++K ++ G+ RVK +++Q L+ EF L MK E
Sbjct: 51 AYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIET 110
Query: 131 ----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAE 168
ED +V K+L ++ +K+ IV I++ +D++++ E
Sbjct: 111 IDEFVGKISGLASKFTTLRVALEDSSLVNKLLDSVPDKYLPIVVGIKQFQDLETMPFEEA 170
Query: 169 VKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQ 210
+ + EE +F E+ + H+ WKA+
Sbjct: 171 IGRMKAY-------EERTTRFRENNNNTDGQLLLTHAEWKAR 205
>gi|124361001|gb|ABN08973.1| Peptidase aspartic, catalytic; Polynucleotidyl transferase,
Ribonuclease H fold [Medicago truncatula]
Length = 972
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 55/251 (21%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQK 58
M G F + +YD+W M +++S + W V G++ P V++D
Sbjct: 1 MEKVGGFVNRPPLLYETNYDYWKSRMSAYLKSVDSKTWKAVLRGWEHP----VVLDKDDN 56
Query: 59 MT-------------DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEG 105
T DEL L + K N LF +D+ + I+K D AK+ WD ++ EG
Sbjct: 57 KTTDLKPEEEWTAPEDELALANSKALNALFNGVDKNMFRLIKKCDVAKDAWDILRTTHEG 116
Query: 106 NARVKKSQLQALRREFETLEMKSGE-----------------------EDVKIVEKILRT 142
++VK S++Q L +FE+L+M+ E D K+V KILR+
Sbjct: 117 TSKVKSSRIQLLTTKFESLKMQEDETIQDYYMNVLDIANSFDSLGEKLSDEKLVRKILRS 176
Query: 143 LTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSN 202
++F V +IEE++++ ++ +V+ L+G+ + E T +KG
Sbjct: 177 -PKRFYMKVTAIEEAQEVSNM---------QVEELIGSLQNYE---LVVDNRTEKKGKGI 223
Query: 203 CHSTWKAQDVS 213
+T A DV
Sbjct: 224 AFTTSTADDVG 234
>gi|90265100|emb|CAH67713.1| H0512B01.8 [Oryza sativa Indica Group]
Length = 1454
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 46/192 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS+LM ++++ W VE G + + M+A + +A
Sbjct: 63 NYTEWSLLMKVMLQARGLWDAVEHGECDEQEDRMAMEA------------------ILRA 104
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ ++ + KD+AK+ WDA+K G RV+K++ Q LRRE+E++ GE
Sbjct: 105 VPSEMISLLATKDSAKDAWDAIKVMHVGVDRVRKAKAQQLRREYESISFHDGESIDDFAL 164
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
E+ ++EK LR + E+F+ I SIE D+ +L+ ED
Sbjct: 165 RLTSLVSQLGTLGERIEEQNVIEKFLRVVPERFSQIAVSIETLLDLSTLT-----IEDVT 219
Query: 175 KTLLGAEEEEEA 186
+ L AEE + A
Sbjct: 220 RRLKVAEERQPA 231
>gi|224093577|ref|XP_002334830.1| predicted protein [Populus trichocarpa]
gi|222875108|gb|EEF12239.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 23/162 (14%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M ++RS++ W +V + D P + A K +E KLK K L + I
Sbjct: 1 MRFYLRSQDLWNVVVSDSDPPPLTANPTIAQMKAHEEEKLKKDKTITCLHSGLADHIFTK 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-------------- 131
I +T K++WD ++ +FE ++RVK +L AL+REFE ++MK E
Sbjct: 61 IMDLETPKQVWDKLQGEFEDSSRVKIVRLLALKREFELMKMKDNESIKDYSSRLMDIVNQ 120
Query: 132 ---------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D K+VEKI+ ++ +KF + +IEES D+++L+
Sbjct: 121 MRLLGKAFTDHKVVEKIMVSVPQKFEAKISAIEESCDLNNLT 162
>gi|77553519|gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 271
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 38/189 (20%)
Query: 4 EGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL 63
EG S P +Y W++ M+ M ++ W +E+ D D +K D++
Sbjct: 14 EGGVSLPYPMLTSTNYSTWAIKMEANMEAQGIWDAIESAAD---------DVVEKKKDKM 64
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
L LF A+ +L I K TAKE W+++K +F G RVKK+++Q L+ EF+
Sbjct: 65 ALA------CLFGAVPDEVLQQIANKKTAKEAWESLKTRFLGVDRVKKARVQTLKSEFKA 118
Query: 124 LEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
L MK E D ++V+K+L ++ EKF I+ +IE+ D+
Sbjct: 119 LCMKKTETIDEFAGKISGLANAMSGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDL 178
Query: 161 DSLSEEAEV 169
D++ E +
Sbjct: 179 DTMPFEEAI 187
>gi|115480545|ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group]
gi|113632099|dbj|BAF25780.1| Os09g0551200 [Oryza sativa Japonica Group]
Length = 280
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 38/189 (20%)
Query: 4 EGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL 63
EG S P +Y W++ M+ M ++ W +E+ D D +K D++
Sbjct: 23 EGGVSLPYPMLTSTNYSTWAIKMEANMEAQGIWDAIESAAD---------DVVEKKKDKM 73
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
L LF A+ +L I K TAKE W+++K +F G RVKK+++Q L+ EF+
Sbjct: 74 ALA------CLFGAVPDEVLQQIANKKTAKEAWESLKTRFLGVDRVKKARVQTLKSEFKA 127
Query: 124 LEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
L MK E D ++V+K+L ++ EKF I+ +IE+ D+
Sbjct: 128 LCMKKTETIDEFAGKISGLANAMSGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDL 187
Query: 161 DSLSEEAEV 169
D++ E +
Sbjct: 188 DTMPFEEAI 196
>gi|108706239|gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1409
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 40/191 (20%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
+S FS P + +Y W + + M + W +E PA+G V +D
Sbjct: 16 SSGSAFSYPQLT--ATNYTSWCIRVQAMMEDQGVWDAIE-----PAAG-VAVDPR----- 62
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
+D K +++L Q+ +L + KK +AKE+WD +K +F G RV++++LQ L+ EF
Sbjct: 63 ----RDKKARSHLLQSQPEDLLMQVAKKRSAKEVWDCLKTRFVGADRVREARLQTLKGEF 118
Query: 122 ETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESK 158
+ M+ GE D +V+K+ T+ EKF +V IE+
Sbjct: 119 GAMVMEPGETLDQYAGRITAMSVRHSALGSTLGDSAMVKKLFDTVPEKFVSLVAGIEQFY 178
Query: 159 DIDSLSEEAEV 169
DID++ E V
Sbjct: 179 DIDTMPFEEAV 189
>gi|356566464|ref|XP_003551451.1| PREDICTED: uncharacterized protein LOC100778447 [Glycine max]
Length = 443
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 1 MTSEGNFSQPAIPRF-VGHYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS + F +YD W + M ++M S + W VE Y+ P S + M K
Sbjct: 1 MEGETSFSHITLLIFDRENYDLWEVKMQSYMESLDLWDAVEEDYEIYPLSKNPTM-TQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
+ E K+K K ++ LF + + + I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 IHKERKMKKAKARSSLFTGVSQMLFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEV 174
REFE M+ E + K+L + K + S+E +KD+ ++ AEV + E
Sbjct: 120 REFELQRMEESETIKEYSNKLL-GIANKIKLLGTSLENTKDLSKIT-LAEVLHALQAQEQ 177
Query: 175 KTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ L+ + E A+H +K C K FR
Sbjct: 178 RRLMRQDRVVEGALPAKHHEDKKKNYPPCQHCGKKGHAPFR 218
>gi|351721388|ref|NP_001235160.1| gag-protease polyprotein [Glycine max]
gi|7488678|pir||T06419 gag-proteinase polyprotein - soybean retrovirus-like element
gi|905361|gb|AAC18777.1| gag-protease polyprotein [Glycine max]
Length = 640
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 5 GNFSQPAIPRFVGHYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTD- 61
G ++P I +Y++W M F++S W V ++ P ++D K TD
Sbjct: 8 GPVNRPPILDGT-NYEYWKARMVAFLKSLDSRTWKAVIKDWEHPK----MLDTEGKPTDG 62
Query: 62 ------------ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARV 109
EL L + K N LF +D+ I I AK+ W+ +K EG ++V
Sbjct: 63 LKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKV 122
Query: 110 KKSQLQALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEK 146
K S+LQ L +FE L+MK E D K+V KILR+L ++
Sbjct: 123 KMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERMTDEKLVRKILRSLPKR 182
Query: 147 FNDIVCSIEESKDIDSL 163
F+ V +IEE++DI +L
Sbjct: 183 FDMKVTAIEEAQDICNL 199
>gi|19881713|gb|AAM01114.1|AC098682_18 Putative retroelement [Oryza sativa Japonica Group]
gi|22725941|gb|AAN04951.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431112|gb|AAP52934.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 299
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 41/172 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS+LM M+++ W VE G E H+ D + L + QA
Sbjct: 56 NYIEWSLLMKVNMQAQGVWDAVELGNTE----------HR--IDRMALAAI------LQA 97
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +L T+ KDTAKE W+A++ G RV++++ Q+LR+EFE + MK GE
Sbjct: 98 VPSEMLATLASKDTAKEAWEAVRTMRMGVERVREAKAQSLRKEFELIRMKEGESVDDFAM 157
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
E+ +V+K LR + K+ + SIE+ D+ +LS E
Sbjct: 158 RLTGLVNNIHTLGAMMEEEMVVKKFLRVVPSKYTQVAISIEQLIDLKTLSVE 209
>gi|147779982|emb|CAN75535.1| hypothetical protein VITISV_009640 [Vitis vinifera]
Length = 236
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 32/190 (16%)
Query: 3 SEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMD---AHQ 57
+ N S + P F G +Y W++ M ++R W VET EP + ++ AH
Sbjct: 2 ASNNTSALSTPVFNGENYQVWAVKMKAYLRGLGLWQWVETERQIEPLGNNPTLNQIGAH- 60
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+E + K + +Y+ A+ I I +T KE WD +K+ + G+ R ++ Q+ L
Sbjct: 61 ---EEEEAKTPRALSYIHAAVSEPIFTRIMACETPKEAWDKLKEMYLGSDRTRQMQILNL 117
Query: 118 RREFETLEMKS---------------------GEE--DVKIVEKILRTLTEKFNDIVCSI 154
+R+FE L MK GEE + ++VEK+L +L E+F + S+
Sbjct: 118 KRQFEVLRMKDNEFIKEYVDKLMEVVNKIRLLGEELTNQRVVEKVLVSLPERFESKISSL 177
Query: 155 EESKDIDSLS 164
E SKD+ +S
Sbjct: 178 ENSKDLTKIS 187
>gi|147835217|emb|CAN67797.1| hypothetical protein VITISV_038915 [Vitis vinifera]
Length = 518
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MT E + + P F G +Y W++ M+ ++ + + W V Y+ P A K+
Sbjct: 1 MTLEASLNASTPPVFDGINYQVWAVRMEAYLDASDLWETVSEEYEVPPLSDNPTIAQIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E + + K K LF + TI I T EIW+ +KK++EG RVK Q+ L R
Sbjct: 61 HNERRQRKSKAKASLFVVVSSTIFTRIMTLKTTNEIWNFLKKEYEGTERVKGMQVLNLIR 120
Query: 120 EFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKD 159
EFE +MK E +K L ++ K ++ ++EE +D
Sbjct: 121 EFEMQKMKES-ETIKDYSNKLLSIVNKQGEVKATVEELQD 159
>gi|356551980|ref|XP_003544350.1| PREDICTED: uncharacterized protein LOC100807415 [Glycine max]
Length = 483
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +F +P F G +YD W + M ++M S + W E Y+ P + M A K
Sbjct: 1 MEGETSFFHITLPIFDGENYDLWEVKMQSYMESLDLWDAAEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKANARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYTGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
REFE MK E + K+L +T K + S+E +KD+ ++
Sbjct: 120 REFEPQRMKESETIKEYSNKLL-GITNKIKLLETSLENTKDLSKIT 164
>gi|29423273|gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 42/184 (22%)
Query: 18 HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELK----------- 64
+Y++W M F++S W V G++ P ++D K TDELK
Sbjct: 20 NYEYWKARMVAFLKSLDSRTWKAVIKGWEHPK----MLDTEGKPTDELKPEEDWTKEEDE 75
Query: 65 --LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
L + K N LF +D+ I I AK+ + +K EG ++VK S+LQ L +FE
Sbjct: 76 LALGNSKALNALFNGVDKNIFRLINTCTVAKDACEILKSTHEGTSKVKMSRLQLLATKFE 135
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
L+MK E D K+V KILR+L ++F+ V +IEE++D
Sbjct: 136 NLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQD 195
Query: 160 IDSL 163
I ++
Sbjct: 196 ICNM 199
>gi|356558310|ref|XP_003547450.1| PREDICTED: uncharacterized protein LOC100784470 [Glycine max]
Length = 589
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W VE Y+ P + M K
Sbjct: 1 MEGETSFSHITLPIFDGENYDLWEVKMQSYMESLDLWDGVEEDYEIYPLPENPTM-TQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKTKARSCLFTGVSKMIFIRIMTLKSPKAIWDYLKEEYTGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
REFE M+ E + K+L + K + S+E +KD+ ++
Sbjct: 120 REFELQRMEESETIKEYSNKLL-GIANKIKLLGTSLENTKDLSKIT 164
>gi|147782850|emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]
Length = 1072
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 25/185 (13%)
Query: 4 EGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
E +F+ A P F G +Y W++ M +++ + W +E Y+ G+ A K E
Sbjct: 3 EASFTA-APPVFNGENYQTWAVRMTVHLQALDVWEAIEEDYEISPLGANPTVAQMKNHKE 61
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
K + KVK LF + IL I + ++A EIW + ++++GN R++ Q+ L REFE
Sbjct: 62 KKTRKAKVKACLFSTVSPLILTRIMQLESATEIWKHLWEEYQGNERLRNMQVMNLIREFE 121
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK + + ++V+K TL EK+ + S+E +KD
Sbjct: 122 MVRMKESQTIKDYAEQLLTIANKVRLLGKEFSNERVVQKNFVTLPEKYEATISSLENTKD 181
Query: 160 IDSLS 164
+ S++
Sbjct: 182 LSSIT 186
>gi|297727655|ref|NP_001176191.1| Os10g0459550 [Oryza sativa Japonica Group]
gi|255679467|dbj|BAH94919.1| Os10g0459550 [Oryza sativa Japonica Group]
Length = 616
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 43/187 (22%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
+ G+ P + R +Y W+++M ++++ W +E GY E +Q D
Sbjct: 74 TAGSVVYPMLTRT--NYTDWALVMRVNLQAQGLWSAIEPGYAE----------YQD--DR 119
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ L + + +A+ +L T+ KDTAKE W+++K G ARV++++ Q LR EFE
Sbjct: 120 MAL------SAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFE 173
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK E E+ K+V+K LR + +F + +IE+ D
Sbjct: 174 LIRMKESESVDEFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLD 233
Query: 160 IDSLSEE 166
+ +LS E
Sbjct: 234 LKTLSIE 240
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 43/187 (22%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
+ G+ P + R +Y W+++M ++++ W +E GY E +Q D
Sbjct: 342 TAGSVVYPMLTRT--NYTDWALVMRVNLQAQGLWSAIEPGYAE----------YQD--DR 387
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ L + + +A+ +L T+ KDTAKE W+++K G ARV++++ Q LR EFE
Sbjct: 388 MAL------SAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFE 441
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK E E+ K+V+K LR + +F + +IE+ D
Sbjct: 442 LIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLD 501
Query: 160 IDSLSEE 166
+ +LS E
Sbjct: 502 LKTLSIE 508
>gi|356498126|ref|XP_003517904.1| PREDICTED: uncharacterized protein LOC100810691 [Glycine max]
Length = 393
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS+ +P F G +YD W + M ++M S + W VE Y+ P + M A K
Sbjct: 1 MEGEASFSRITLPIFDGENYDSWEVKMQSYMESLDVWDAVEEDYEIYPLPENSTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIVTLKSPKAIWDYLKEEYAGDDRIRSIQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIV-CSIEESKDIDSLSEEAEV----KEDE 173
REFE M+ +T+ E N ++ + + +KD+ ++ AEV + E
Sbjct: 120 REFELQRMQES-----------KTIKEYSNKLLGIANKNTKDLSKIT-LAEVLHALQAQE 167
Query: 174 VKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ L+ + E A+H +K C K FR
Sbjct: 168 QRRLMRQDRVVEGALPAKHNEDKKKNYPPCQHCGKKGHAPFR 209
>gi|147795970|emb|CAN76333.1| hypothetical protein VITISV_021982 [Vitis vinifera]
Length = 801
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 83/190 (43%), Gaps = 43/190 (22%)
Query: 13 PRFVG-HYDHWSMLMDNF--MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK--- 66
P G +Y HW + M F M+S++ W VE G+ P ++D + T+ +K K
Sbjct: 14 PFLTGENYSHWKVRMQYFLKMQSEKXWNTVEFGWSPPK----VLDREGRPTNXIKPKLEW 69
Query: 67 ----------DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+ + +F AI I +AKE WD ++ EG K S+LQ
Sbjct: 70 DRXENEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAXKVSKLQM 129
Query: 117 LRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCS 153
L FET+ M E + K+V KILR+L E+F V +
Sbjct: 130 LTSRFETIRMDDHETFGEFNAKLMDXVNSSFNLGEPISNSKVVRKILRSLPERFRAKVTA 189
Query: 154 IEESKDIDSL 163
IEESKD+DSL
Sbjct: 190 IEESKDVDSL 199
>gi|224147121|ref|XP_002336413.1| predicted protein [Populus trichocarpa]
gi|222834940|gb|EEE73389.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS + P G +Y W++ M+ ++ + + W VE Y+ P + K
Sbjct: 1 MDNEASFSHISSPISNGENYQLWAVRMETYLEALDIWEAVEEYYEIPPLPTNPTMTQIKS 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K K L A+ T+ I +AK++WD +K+++ G+ R++ Q L
Sbjct: 61 HKERKTKKSKAKACLLAAVSTTVFTRIMSLKSAKDVWDYLKEEYAGDERIRGMQSLNLII 120
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E D +IVEKIL T+ E++ + ++E
Sbjct: 121 EFELQRMKESETIKEYSEKLLGIVNKVRLLGTDFTDCRIVEKILVTVPERYEASITTLEN 180
Query: 157 SKDIDSLS 164
+KD+ ++
Sbjct: 181 TKDLSKIN 188
>gi|110289190|gb|AAP54120.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 609
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 43/187 (22%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
+ G+ P + R +Y W+++M ++++ W +E GY E + + A
Sbjct: 68 TAGSVVYPMLTR--TNYTDWALVMRVNLQAQGLWSAIEPGYAEYQDDRMALSA------- 118
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ +A+ +L T+ KDTAKE W+++K G ARV++++ Q LR EFE
Sbjct: 119 -----------ILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFE 167
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK E E+ K+V+K LR + +F + +IE+ D
Sbjct: 168 LIRMKESESVDEFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLD 227
Query: 160 IDSLSEE 166
+ +LS E
Sbjct: 228 LKTLSIE 234
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 43/187 (22%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
+ G+ P + R +Y W+++M ++++ W +E GY E + + A
Sbjct: 350 TAGSVVYPMLTR--TNYTDWALVMRVNLQAQGLWSAIEPGYAEYQDDRMALSA------- 400
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ +A+ +L T+ KDTAKE W+++K G ARV++++ Q LR EFE
Sbjct: 401 -----------ILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFE 449
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK E E+ K+V+K LR + +F + +IE+ D
Sbjct: 450 LIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLD 509
Query: 160 IDSLSEE 166
+ +LS E
Sbjct: 510 LKTLSIE 516
>gi|359487478|ref|XP_003633600.1| PREDICTED: uncharacterized protein LOC100853661 [Vitis vinifera]
Length = 558
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++GN R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAVEIWEYLKEEYKGNERIKNMQVMNLIREFEMKKMR 126
>gi|22213210|gb|AAM94550.1| putative lectin receptor kinase [Oryza sativa Japonica Group]
Length = 594
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 43/187 (22%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
+ G+ P + R +Y W+++M ++++ W +E GY E + + A
Sbjct: 68 TAGSVVYPMLTR--TNYTDWALVMRVNLQAQGLWSAIEPGYAEYQDDRMALSA------- 118
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ +A+ +L T+ KDTAKE W+++K G ARV++++ Q LR EFE
Sbjct: 119 -----------ILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFE 167
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK E E+ K+V+K LR + +F + +IE+ D
Sbjct: 168 LIRMKESESVDEFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLD 227
Query: 160 IDSLSEE 166
+ +LS E
Sbjct: 228 LKTLSIE 234
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 43/187 (22%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
+ G+ P + R +Y W+++M ++++ W +E GY E + + A
Sbjct: 335 TAGSVVYPMLTR--TNYTDWALVMRVNLQAQGLWSAIEPGYAEYQDDRMALSA------- 385
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ +A+ +L T+ KDTAKE W+++K G ARV++++ Q LR EFE
Sbjct: 386 -----------ILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFE 434
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK E E+ K+V+K LR + +F + +IE+ D
Sbjct: 435 LIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLD 494
Query: 160 IDSLSEE 166
+ +LS E
Sbjct: 495 LKTLSIE 501
>gi|224147346|ref|XP_002336456.1| predicted protein [Populus trichocarpa]
gi|222835066|gb|EEE73515.1| predicted protein [Populus trichocarpa]
Length = 484
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 54/214 (25%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY---------------- 43
M S G+ P+F G +YD W++ M+ + + + W +VE G
Sbjct: 1 MVSSGDLR---TPQFNGVNYDFWAVKMETILIAFDLWDVVEFGMKSGSSVKEEESEKEDK 57
Query: 44 --------DEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI 95
D S+ A + + E K+++ K + + A+ + IR ++TA+
Sbjct: 58 KNDETESKDGETKSSI---AEEAVFRENKIRNAKALSLIQGALTDELFPRIRNENTAQGA 114
Query: 96 WDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------------EDV-- 133
W+ +K+++ G+ +V+ +LQA+R EFE + M GE EDV
Sbjct: 115 WNVLKREYRGDKKVRSVKLQAVRAEFEYMRMSEGEGLEHYLSKFFEAINSLKSLGEDVPE 174
Query: 134 -KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+IV+K+L +L ++ IV IEE++D+D L E
Sbjct: 175 IRIVQKLLMSLNRRYKSIVSIIEETRDLDVLKVE 208
>gi|224154671|ref|XP_002337503.1| predicted protein [Populus trichocarpa]
gi|222839482|gb|EEE77819.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 54/214 (25%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY---------------- 43
M S G+ P+F G +YD W++ M+ + + + W +VE G
Sbjct: 1 MVSSGDLR---TPQFNGVNYDFWAVKMETILIAFDLWDVVEFGMKSGSSVKEEESEKEDK 57
Query: 44 --------DEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI 95
D S+ A + + E K+++ K + + A+ + IR ++TA+
Sbjct: 58 KNDETESKDGETKSSI---AEEAVFRENKIRNAKALSLIQGALTDELFPRIRNENTAQGA 114
Query: 96 WDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------------EDV-- 133
W+ +K+++ G+ +V+ +LQA+R EFE + M GE EDV
Sbjct: 115 WNVLKREYRGDKKVRSVKLQAVRAEFEYMRMSEGEGLEHYLSKFFEAINSLKSLGEDVPE 174
Query: 134 -KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+IV+K+L +L ++ IV IEE++D+D L E
Sbjct: 175 IRIVQKLLMSLNRRYKSIVSIIEETRDLDVLKVE 208
>gi|399920207|gb|AFP55554.1| gag-pol polyprotein [Rosa rugosa]
Length = 733
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 38/184 (20%)
Query: 19 YDHWSMLMDNFMRSKE--YWGLVETGYDEP-----------ASGSVLMDAHQKMTDELKL 65
Y W ++M F+ S++ W +VE G++ P S + + +E++
Sbjct: 155 YSQWKIMMRAFLYSQDENMWNIVEIGWEHPTMAEDSKKEEVVSARIPKPRKEWTKEEVRD 214
Query: 66 K--DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
+ D K +N LF A+ + I DTAK+ WD ++ +EGN +V+ +LQ L EFE
Sbjct: 215 RNCDFKARNSLFTALSKKERMRISHCDTAKQAWDLLQVTYEGNKKVRGQKLQRLVLEFEN 274
Query: 124 LEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
+ M E E+ +IV+K LR+L KF +IEE++D+
Sbjct: 275 MSMTEDESIDDFHARLLNVTSQCRSLDDPFEEHRIVKKFLRSLPSKFQAKQIAIEEAQDL 334
Query: 161 DSLS 164
D+ +
Sbjct: 335 DTYT 338
>gi|147842492|emb|CAN65221.1| hypothetical protein VITISV_042416 [Vitis vinifera]
Length = 487
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 11 AIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
A P F G +Y W++ M +++ + W +E Y+ P G+ A K E K + +K
Sbjct: 9 APPVFNGENYQTWAVRMIVHLQALDVWEAIEEDYEIPPLGANPTVAQMKNHKEKKTRKVK 68
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
K LF AI IL I + ++ EIW+ ++++++GN RVK Q+ L REFE + M+S
Sbjct: 69 AKACLFPAISPLILTRIMQLESVAEIWEHLREEYQGNERVKNMQVMNLIREFEMVMMES 127
>gi|356554771|ref|XP_003545716.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-7-like
[Glycine max]
Length = 620
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W VE Y+ P S + M A K
Sbjct: 1 MEGEASFSHITLPIFDGENYDLWEVKMQSYMESWDLWDAVEEDYEIYPLSENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
+ K+K K ++ LF + + I I + K IW+ +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKKRKMKKAKARSCLFTGVSQMIFIRIMTLKSPKTIWEYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIE 155
+EFE M+ E D +IVEKIL T+ E++ + S+E
Sbjct: 120 KEFELQRMQESETIKEYSNKLLGIANKIKLLGSDFVDSRIVEKILVTVPERYEASIASLE 179
Query: 156 ESKDIDSLS 164
+KD+ ++
Sbjct: 180 NTKDLSKIT 188
>gi|147780881|emb|CAN70479.1| hypothetical protein VITISV_023585 [Vitis vinifera]
Length = 958
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 31/195 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLV-ETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y W + M ++++ ++W +V E P + + + DE K K K K +
Sbjct: 18 NYQIWYVKMQTYLKAFDFWEVVAEDKPIAPLPANPTLAQIKAHIDE-KTKKFKAKTLIQN 76
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------ 130
++ + I T KE WD +K +++G+ R K+ Q+ L+R+F++L MK E
Sbjct: 77 SVADLVFHRIMNCRTTKEAWDKLKLEYQGSDRTKQMQVLNLKRDFKSLTMKEDETITKYS 136
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
D +IVEK+L TL E+F + S+EES+D+ +S E
Sbjct: 137 DRISLIVNKIRSLGEKFPDARIVEKVLVTLPERFESKISSLEESRDLSQISLA------E 190
Query: 174 VKTLLGAEEEEEAGK 188
+ L A+E+ A K
Sbjct: 191 IINALQAQEQRRALK 205
>gi|147768381|emb|CAN71522.1| hypothetical protein VITISV_037360 [Vitis vinifera]
Length = 196
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 3 SEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
+ N S A F G +Y WS+ M ++ + + W +V P ++ + + TD
Sbjct: 2 ASNNISLLAPQIFAGENYRIWSVKMQMYLEAFDLWEVVVHKPIAPLPTNLTLAQIKAYTD 61
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
E K K + K + ++ ++ I T KE WD +K +++G+ + K+ Q+ L+R+F
Sbjct: 62 E-KTKKFEAKTLIQNSVADSVFHRIMNYKTTKEAWDKLKLEYQGSDKTKQMQVLNLKRDF 120
Query: 122 ETLEMKS---------------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESK 158
++L M+ GEE D +IVEKIL TL E+F + ++EES+
Sbjct: 121 KSLTMQEDETITTYSDRIALIVNKIRSLGEEFLDARIVEKILVTLPERFESKISTLEESR 180
Query: 159 DIDSLS 164
D +S
Sbjct: 181 DFSQIS 186
>gi|147833448|emb|CAN68520.1| hypothetical protein VITISV_011970 [Vitis vinifera]
Length = 582
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 44/170 (25%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ N F A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGA---------------------NPTFAA 55
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 56 VSPSIFIKIMKIDLAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAT 115
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 116 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 165
>gi|356565678|ref|XP_003551065.1| PREDICTED: uncharacterized protein LOC100819239 [Glycine max]
Length = 488
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS +P F G +YD W + M ++M S + W +VE Y+ P + M A K
Sbjct: 1 MEGEASFSHITLPIFDGENYDLWEVKMQSYMESLDLWDVVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ + R++ Q+ LR
Sbjct: 60 NHKERKMKKAKTRSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYARDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIV-CSIEESKDIDSLSEEAEV----KEDE 173
REFE M+ L T+ E N ++ + + +KD+ ++ AEV + E
Sbjct: 120 REFELQRMEE-----------LETIKEYSNKLLGIANKNTKDLSKIT-LAEVLHAMQAQE 167
Query: 174 VKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ L+ + E A+H +K C K FR
Sbjct: 168 QRRLMRKDRVVEGALPAKHHEDKKKNYPPCQHCGKKGHAPFR 209
>gi|359493619|ref|XP_003634637.1| PREDICTED: uncharacterized protein LOC100854919 [Vitis vinifera]
Length = 548
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|224147020|ref|XP_002336387.1| predicted protein [Populus trichocarpa]
gi|222834870|gb|EEE73319.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS + F G +Y W++ M+ ++ + + W VE Y+E +
Sbjct: 70 MEAESSFSHISSLIFDGENYQLWAVKMETYLDALDLWEAVEDDYEERKT----------- 118
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+ K K LF AI TI I +AK++WD +KK++ G+ R++ Q L R
Sbjct: 119 ----RKSKAKAKACLFAAISTTIFTRIMSLKSAKDVWDYLKKEYAGDERIRGMQSLNLIR 174
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEE 156
EFE MK E D +IVEKIL T+ E++ + ++E
Sbjct: 175 EFELQRMKDSETTKEYSDKLLGIVNKVRLLGTYFSDCRIVEKILVTVPERYEASITTLEN 234
Query: 157 SKDIDSL 163
+KD+ +
Sbjct: 235 TKDLSKI 241
>gi|359493379|ref|XP_003634580.1| PREDICTED: uncharacterized protein LOC100854770 [Vitis vinifera]
Length = 558
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|359492435|ref|XP_003634412.1| PREDICTED: uncharacterized protein LOC100853086 [Vitis vinifera]
Length = 558
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|359483610|ref|XP_002272161.2| PREDICTED: uncharacterized protein LOC100246970 [Vitis vinifera]
Length = 558
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|225459509|ref|XP_002284438.1| PREDICTED: uncharacterized protein LOC100267674 [Vitis vinifera]
Length = 558
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|224092958|ref|XP_002334863.1| predicted protein [Populus trichocarpa]
gi|222875333|gb|EEF12464.1| predicted protein [Populus trichocarpa]
Length = 484
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 54/214 (25%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY---------------- 43
M S G+ P+F G +YD W++ M+ + + + W +VE G
Sbjct: 1 MVSSGDLR---TPQFNGVNYDFWAVKMETILIAFDLWDVVEFGMKSGSSVKEEESEKEDK 57
Query: 44 --------DEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI 95
D S++ +A + E K+++ K + + A+ + IR ++TA+
Sbjct: 58 KNDETESKDGETKSSIVEEA---VFRENKIRNAKALSLIQGALTDELFPRIRNENTAQGA 114
Query: 96 WDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------------EDV-- 133
W+ +K+++ G+ +V+ +LQA+R +FE + M GE EDV
Sbjct: 115 WNVLKREYRGDKKVRSVKLQAVRAKFEYMRMSEGEGLEHYLSKFFEAINSLKSLGEDVPE 174
Query: 134 -KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+IV+K+L +L ++ IV IEE++D+D L E
Sbjct: 175 IRIVQKLLMSLNRRYKSIVSIIEETRDLDVLKVE 208
>gi|359494127|ref|XP_003634724.1| PREDICTED: uncharacterized protein LOC100852742 [Vitis vinifera]
Length = 558
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|359481123|ref|XP_003632572.1| PREDICTED: uncharacterized protein LOC100855048 [Vitis vinifera]
Length = 548
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|147800639|emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]
Length = 783
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 43/190 (22%)
Query: 13 PRFVG-HYDHWSMLMDNF--MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK--- 66
P G +Y HW + M F M+S++ W VE G+ P ++D + T+ +K K
Sbjct: 14 PFLTGENYSHWKVRMQYFLKMQSEKVWNAVEFGWSPPK----VLDREGRPTNVIKPKLEW 69
Query: 67 ----------DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+ + +F AI I +AKE WD ++ E VK S+L
Sbjct: 70 DRGDNEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEDTNAVKVSKLLM 129
Query: 117 LRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCS 153
L FET+ M+ E + K+V KILR+L+E+F V +
Sbjct: 130 LTSRFETIRMEDHENFGEFYAKLMDIVNSSFNLGEPIPNSKVVRKILRSLSERFRAKVTA 189
Query: 154 IEESKDIDSL 163
IEESKD+DSL
Sbjct: 190 IEESKDVDSL 199
>gi|147790730|emb|CAN72434.1| hypothetical protein VITISV_039727 [Vitis vinifera]
Length = 546
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y P G+ A K+ E + K K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYKVPPLGANPTVAQMKLHKERRTKKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|225450354|ref|XP_002269175.1| PREDICTED: uncharacterized protein LOC100264740 [Vitis vinifera]
Length = 505
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|297719655|ref|NP_001172189.1| Os01g0160300 [Oryza sativa Japonica Group]
gi|9757691|dbj|BAB08210.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672895|dbj|BAH90919.1| Os01g0160300 [Oryza sativa Japonica Group]
Length = 305
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 41/170 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ M FM ++ W VE DA + D++ L + QA
Sbjct: 41 NYGIWAVKMKIFMHAQGVWAAVEG------------DAADEKIDQMALA------AIVQA 82
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ ++ I +K+TAKE WDA+K+ G RVKK+++Q L+RE + + M + E
Sbjct: 83 VPEAVVMAISEKETAKEAWDALKQMNMGEERVKKARVQTLKRELDGMYMSNSEKINDFAL 142
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
E+ +VEK+L ++ +KF ++ +IE+ D+ ++
Sbjct: 143 KVTTIVNEIRSLGTKVEETTVVEKLLHSVPDKFQPLISTIEQWGDVSEMT 192
>gi|147810581|emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera]
Length = 639
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 16/98 (16%)
Query: 95 IWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSI 154
IWD+MKKK+EGN RVK+S +QALR+EFETLEMKSGE +++ + +
Sbjct: 184 IWDSMKKKYEGNERVKRSIIQALRKEFETLEMKSGEGVFDYFSRVMFVANKM------RV 237
Query: 155 EESKDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEH 192
ESKDID LS DE+++ L E+ KF H
Sbjct: 238 HESKDIDLLS------IDELQSSLIVHEQ----KFHRH 265
>gi|359491323|ref|XP_003634264.1| PREDICTED: uncharacterized protein LOC100854076 [Vitis vinifera]
Length = 548
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYEIWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWGYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|113205349|gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1140
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 8 SQPAIPRFVG--HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKMTDELK 64
S P P +Y W++ M +++ W VE EP + + + +E+
Sbjct: 5 SSPLSPPIFNSENYQVWAVKMKTYLKGLGLWKYVEEDNAPEPLRANPTLQQIRSHEEEIA 64
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
K K +++ A+ +I I ++AKE WD +K++F+G+ R ++ Q+ LR+EFE L
Sbjct: 65 -KGPKALSFIHAAVSDSIFTRIMTCESAKESWDMLKQEFQGSDRTRQMQILNLRKEFEML 123
Query: 125 EMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
MK E E+ +IVEK++ TL EKF + SIE++ D+
Sbjct: 124 RMKETEKVKDYIDRIMKIFNQIRLLGEKVEEQRIVEKVIVTLPEKFEAKISSIEDTWDM- 182
Query: 162 SLSEEAEVKEDEVKTLLGAEEEEEA 186
+ V +E+ L A E+ +A
Sbjct: 183 -----SRVTLNELSNALLAVEKRKA 202
>gi|222617781|gb|EEE53913.1| hypothetical protein OsJ_00468 [Oryza sativa Japonica Group]
Length = 726
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 41/170 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ M FM ++ W VE DA + D++ L + QA
Sbjct: 462 NYGIWAVKMKIFMHAQGVWAAVEG------------DAADEKIDQMALA------AIVQA 503
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ ++ I +K+TAKE WDA+K+ G RVKK+++Q L+RE + + M + E
Sbjct: 504 VPEAVVMAISEKETAKEAWDALKQMNMGEERVKKARVQTLKRELDGMYMSNSEKINDFAL 563
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
E+ +VEK+L ++ +KF ++ +IE+ D+ ++
Sbjct: 564 KVTTIVNEIRSLGTKVEETTVVEKLLHSVPDKFQPLISTIEQWGDVSEMT 613
>gi|359487485|ref|XP_003633601.1| PREDICTED: uncharacterized protein LOC100853804 [Vitis vinifera]
Length = 449
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+A EIW+ +K++++G R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGYERIKNMQVMNLIREFEMKKMR 126
>gi|224111142|ref|XP_002332977.1| predicted protein [Populus trichocarpa]
gi|222834308|gb|EEE72785.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 7 FSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDE---PASGSVLMDAHQKMTDE 62
+S + P F G +Y W+ M +++ ++W +E ++ PA ++ A + E
Sbjct: 6 YSLASPPVFTGENYQMWAARMKTYLQGCDFWDAIEQEHESQPLPADPTI---AQIRNHRE 62
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ + K K L+ A+ I I DTAK+IW+ ++++F GN R+ + Q+ LRREFE
Sbjct: 63 ERARKFKAKTCLYSAVSEAIFPRIIALDTAKQIWNYLQEEFHGNERIIQMQVLNLRREFE 122
Query: 123 TLEMKSGE 130
+MK E
Sbjct: 123 IQKMKETE 130
>gi|147788266|emb|CAN69957.1| hypothetical protein VITISV_032884 [Vitis vinifera]
Length = 169
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 23/130 (17%)
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
K +E K + K K YLF A+ TI I ++ K+IWD +KK+++GN R K Q+ L
Sbjct: 5 KTHNERKTRKSKAKAYLFXAVSSTIFTRIMNLESTKDIWDYLKKEYQGNERTKNMQVLNL 64
Query: 118 RREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSI 154
REFE L++K + D +IV+KI TL + + + S+
Sbjct: 65 IREFEMLKIKETKTIKDYSDKLLGIVNKVRLLGKDFSDERIVQKIPVTLPKNYESKISSL 124
Query: 155 EESKDIDSLS 164
EESKD+ S+S
Sbjct: 125 EESKDLSSIS 134
>gi|147840444|emb|CAN66133.1| hypothetical protein VITISV_026878 [Vitis vinifera]
Length = 1302
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 42/184 (22%)
Query: 18 HYDHWSMLMDNF--MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK--------- 66
+Y HW + M F M+S+ W VE G+ P ++D + T+ +K K
Sbjct: 20 NYFHWKVRMQYFLKMQSENVWNAVEFGWSPPK----VLDREGRSTNVIKPKLEWDKGDNE 75
Query: 67 ----DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ + +F AI+ I + KE WD ++ EG VK S+LQ L +FE
Sbjct: 76 ASENNARAMYSIFNAINTDEFHRIATCTSTKEAWDILQVIHEGTNAVKVSKLQMLTSKFE 135
Query: 123 TLEMKS----GEEDV-------------------KIVEKILRTLTEKFNDIVCSIEESKD 159
T+ M+ GE V K+V KILR+L E+F V +IEESKD
Sbjct: 136 TIRMEDHENFGEFHVKLMDILNSSFNLGEPIPHSKVVRKILRSLLERFKAKVTAIEESKD 195
Query: 160 IDSL 163
+D L
Sbjct: 196 VDFL 199
>gi|113205300|gb|AAT38726.2| hypothetical protein SDM1_41t00003 [Solanum demissum]
Length = 304
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F Q AIP F GHYDHW+MLM+NF+RSKE+W +V G EP + + H++ + ++ L+
Sbjct: 6 FVQAAIPHFDGHYDHWTMLMENFLRSKEFWSVVSVGVQEPTT-DMPRRNHKRQSWKINLQ 64
Query: 67 D 67
D
Sbjct: 65 D 65
>gi|357466509|ref|XP_003603539.1| hypothetical protein MTR_3g108870 [Medicago truncatula]
gi|355492587|gb|AES73790.1| hypothetical protein MTR_3g108870 [Medicago truncatula]
Length = 125
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 68/165 (41%)
Query: 24 MLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTIL 83
ML++NF+ SKEYW LVE+ SV + ++
Sbjct: 1 MLVENFLCSKEYWNLVES--------SVYISTPEE------------------------- 27
Query: 84 DTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV---------- 133
I+K D++K+K++G+++VK++QLQAL +EFE L+MK G++ +
Sbjct: 28 --IKK--------DSIKQKYQGSSKVKRAQLQALHKEFELLDMK-GDDSIDEYFSRTLSI 76
Query: 134 --------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
IVE IL++LT F+ +VCSIEES D +LS
Sbjct: 77 VNWMNMHGKKVDQGTIVENILKSLTTNFDYVVCSIEESSDATTLS 121
>gi|147822183|emb|CAN77044.1| hypothetical protein VITISV_029293 [Vitis vinifera]
Length = 566
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIW---DAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVK 134
+ +I I K D+A EIW DA+ K + +++ L +EF + K
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEESDAV-KDYAAQLLSIADKVRLLGKEF---------SNEK 126
Query: 135 IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
IV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 127 IVQKILVTLPEKYEATISSLENSKDLSTIS 156
>gi|55733863|gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1332
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 41/175 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W V+ GY E M A L QA
Sbjct: 55 NYADWALLMRVNLQAQGLWAAVDPGYAEFREDRQAMAA------------------LLQA 96
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ + +L + KKDTAKE+WDA+K G RV++++ QALR ++E ++ K GE
Sbjct: 97 VPKEMLRPLSKKDTAKEVWDAIKTMRVGVDRVREAREQALRSQYEAIQFKDGETVEDFAL 156
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
D +++K+LR + ++ + SIE+ D+ ++ E V
Sbjct: 157 RLHALVIDIRDMGGTLTDEHMLKKLLRVVPFHYHQLALSIEQMLDLKTMPLEELV 211
>gi|3777527|gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 42/176 (23%)
Query: 26 MDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELK-------------LKDLKV 70
M F++S W V G++ P ++D K T+ELK L + K
Sbjct: 1 MVAFLKSLDSRTWKAVIKGWEHPK----MLDTEGKPTNELKPEEDWTKEEDELALGNSKA 56
Query: 71 KNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
N LF +D+ I I AK+ W+ +K EG ++VK S+LQ L +FE L+MK E
Sbjct: 57 LNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEE 116
Query: 131 -----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
D K+V KILR+L ++F+ V +IEE++DI ++
Sbjct: 117 CIHEFHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNM 172
>gi|9665090|gb|AAF97281.1|AC010164_3 Hypothetical protein [Arabidopsis thaliana]
gi|12324507|gb|AAG52212.1|AC022288_11 putative gag-pol polyprotein; 76173-77576 [Arabidopsis thaliana]
Length = 467
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 42/173 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+M M ++ + W ++ETG ++P + M + LFQA
Sbjct: 29 NYTVWAMKMKVALKVHKTWDVIETGANDPEKNDMAM------------------HLLFQA 70
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
I +++ I + DTAK++W+A+K+K G RVK+++LQ L EF+ L+MK E
Sbjct: 71 IPESMVLQIGELDTAKKVWEAIKEKNVGAERVKEARLQTLMNEFDRLKMKDSENIEAFSG 130
Query: 131 ----------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDIDSLSEE 166
E K+V+K L++L +K+ IV S+E+ D+ + S E
Sbjct: 131 RLAEIASKSAALGENIETEKLVKKFLKSLPRKKYIQIVASLEQVLDLKNTSFE 183
>gi|147822207|emb|CAN77696.1| hypothetical protein VITISV_043521 [Vitis vinifera]
Length = 559
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 34/170 (20%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +I I K D+ EIW+ +K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSXAEIWE-----------IKNMQVMNLIREFEMKKMRESDAVKDYAA 125
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 126 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 175
>gi|224115988|ref|XP_002317178.1| predicted protein [Populus trichocarpa]
gi|222860243|gb|EEE97790.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M +S+ +VE G ++P + S+L +A QK + K KD + Q++ TI
Sbjct: 1 MMTLFKSQNLTDIVEKGLNKPTNISILEEAQQKELEVRKQKDASALYLIQQSLAITIFPR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------DVKIVEKI 139
I + TAK+ WD ++K+F G+++V+ +LQ LRRE E ++MK E VK+V
Sbjct: 61 ISEASTAKQAWDTLQKEFLGDSKVRTIRLQILRRELENIKMKYSETVKDYHGRVKVVVNQ 120
Query: 140 LRTLTEKFND 149
R++ E D
Sbjct: 121 TRSVGENVTD 130
>gi|359483401|ref|XP_003632949.1| PREDICTED: uncharacterized protein LOC100853606 [Vitis vinifera]
Length = 505
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ +I I K D+ EIW+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 VSPSIFIKIMKIDSTAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMR 126
>gi|46391155|gb|AAS90682.1| pupative polyprotein [Oryza sativa Japonica Group]
Length = 1404
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 44/198 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ WS+LM ++++ WG ++ G E + +DA + A
Sbjct: 59 NYNDWSLLMKIKLQARCLWGAIDPGGVELHEDRMALDA------------------ICSA 100
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV-- 133
+ ++ T+ K +AKE WD ++ G+ R++K+ Q +R E+E+L ++ GE ED
Sbjct: 101 VPPEMISTLATKASAKEAWDCIRILRVGDDRIRKASAQKVRMEYESLVLRDGETVEDFAM 160
Query: 134 -------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE---AEVKE 171
K+VEK LR +F +V SIE DI +LS E +K
Sbjct: 161 RLTSTVNQLATLGDPEPADKVVEKYLRVARPRFTQLVLSIETLLDISTLSLEEVTGRLKA 220
Query: 172 DEVKTLLGAEEEEEAGKF 189
E L + + AGK
Sbjct: 221 AEDAMPLPSSSSDNAGKL 238
>gi|183584128|gb|ACC63530.1| polyprotein [Hordeum vulgare]
Length = 1274
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 41/205 (20%)
Query: 5 GNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELK 64
G+ + P + R +Y WS+LM+ M+++ W +E D L + + D+
Sbjct: 44 GHANVPPLTR--TNYAEWSLLMEVGMQARGMWRAIEGAED-------LDEEYGYRNDKGA 94
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K ++ +++ +L +RK T++E+W+A++ G+ARV+ ++ Q LR EF+ L
Sbjct: 95 MK------FILRSVPAEMLPMLRKHKTSQELWEAIRAMRAGSARVRDAKAQNLRGEFDQL 148
Query: 125 EMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
KSGE D + ++K LR + ++++ +V SI+ D+D
Sbjct: 149 RHKSGESIDELAMRLTGMCARLGELGDAISDKRAIQKWLRIVPKRYSQLVLSIDNLVDLD 208
Query: 162 SLSEEAEV---KEDEVKTLLGAEEE 183
+ S E + K E + L EEE
Sbjct: 209 TTSIEEVIGRFKAAEERYELDVEEE 233
>gi|356544858|ref|XP_003540864.1| PREDICTED: uncharacterized protein LOC100820212 [Glycine max]
Length = 424
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +F +P F G +YD W + M ++M S W VE Y+ P + M A K
Sbjct: 1 MEGEASFFHITLPIFDGENYDLWEVKMQSYMESLNLWDAVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K ++ LF + + I I + K IWD +K+++ G+ R++ Q+ L+
Sbjct: 60 NHKERKMKKAKARSCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYVGDDRIRSMQVLNLK 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
REFE M+ + + K+L ++ K + S++ +KD+ ++
Sbjct: 120 REFELQRMEESDTIKEYSNKLL-GISNKIKLLGISLKNTKDLSKIT 164
>gi|224056605|ref|XP_002298933.1| predicted protein [Populus trichocarpa]
gi|222846191|gb|EEE83738.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK 71
P F G +Y W++ M+ ++ + + W VE Y+ P + A K E K+K K K
Sbjct: 35 PVFDGDNYQIWAVRMEIYLDALDLWEAVEEDYEIPELSNNPTMAQIKAHKEKKMKKSKAK 94
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE- 130
LF + TI I +AKEIWD +K ++EG+ R++ Q+ L R+FE +MK E
Sbjct: 95 VCLFTVVSSTIFTRIMSLKSAKEIWDYLKIEYEGDERIRGIQVLNLVRDFELQKMKKTES 154
Query: 131 ----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE-- 166
+ +IV+KIL T+ EKF + S+E +KD+ ++
Sbjct: 155 IKEYSDRLLNIASRVRLLGSSLPESRIVQKILVTIPEKFEATITSLENTKDMSKITLSDM 214
Query: 167 -AEVKEDEVKTLLGAEEEEEAGKFAEH 192
++ E + + E++ E F +H
Sbjct: 215 LNALQAQEQRRAMRQEDDVEGALFVKH 241
>gi|147846408|emb|CAN79909.1| hypothetical protein VITISV_023346 [Vitis vinifera]
Length = 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 44/191 (23%)
Query: 13 PRFVG--HYDHWSMLMDNF--MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK-- 66
P F+ +Y HW + M F M+S++ W ++E G+ P +++D + T+ +K K
Sbjct: 13 PHFLTXENYSHWKVRMQYFLKMQSEKVWNVIEFGWSPP----MVLDRESRSTNVVKPKLE 68
Query: 67 -----------DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
+++V +F AI I AKE WD ++ EG +K S+ Q
Sbjct: 69 WDRSESETSENNVRVMYSIFNAISMNEFCRIAICTLAKEAWDILQVTHEGTNVMKVSKFQ 128
Query: 116 ALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVC 152
L FET+ M E + K+V KILR L E+F +
Sbjct: 129 MLTSRFETIRMDDHETFGEFHAKLMDIMNSSFNLGEPISNSKVVRKILRPLLERFRAKIT 188
Query: 153 SIEESKDIDSL 163
+IE+SKD SL
Sbjct: 189 TIEKSKDAGSL 199
>gi|147864819|emb|CAN83641.1| hypothetical protein VITISV_005205 [Vitis vinifera]
Length = 603
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 44/191 (23%)
Query: 13 PRFVG--HYDHWSMLMDNF--MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK-- 66
P F+ +Y HW + M F M+S++ W VE G+ S ++D ++T+ +K K
Sbjct: 13 PPFLTSENYSHWKVRMQYFLKMQSEKVWNAVEFGW----SPLKVLDREGRLTNVIKPKLE 68
Query: 67 -----------DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
+ + +F AI I +AKE WD ++ E VK S+LQ
Sbjct: 69 WDRGDNEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILRVTHEETNAVKVSKLQ 128
Query: 116 ALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVC 152
L FET+ M+ E + K+V KILR+L E+F V
Sbjct: 129 MLTSRFETIRMEDHENFGEFHAKLMDIVNSSFNLGEPIPNSKVVRKILRSLLERFRAKVT 188
Query: 153 SIEESKDIDSL 163
+IEESKD+D L
Sbjct: 189 AIEESKDVDFL 199
>gi|147770423|emb|CAN62685.1| hypothetical protein VITISV_019302 [Vitis vinifera]
Length = 398
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 85 TIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE--DVKIVEKILRT 142
+++ + T KE WD +K +++G+ R K+ Q+ L+R+F++L M GE+ D KI EK+L T
Sbjct: 23 SVKMQTTTKEAWDKLKLEYQGSDRTKQMQVLNLKRDFKSLTMSLGEKFPDAKIAEKVLVT 82
Query: 143 LTEKFNDIVCSIEESKDIDSLS 164
L E+F + S+EES+D+ +S
Sbjct: 83 LPERFESKISSLEESRDLSQIS 104
>gi|224146788|ref|XP_002336337.1| predicted protein [Populus trichocarpa]
gi|222834751|gb|EEE73214.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMD----A 55
M+SE + + A P F G +Y W + M+ ++ + + W VE Y+ P +L+D A
Sbjct: 1 MSSEASVNLMAPPVFDGTNYQVWVVRMEAYLYANDQWEAVEDTYEVP----LLLDNPTIA 56
Query: 56 HQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
K E K K K K LF A+ +I I TA EIW+ +KKK+EGN RVK Q+
Sbjct: 57 QMKNHKESKQKKSKAKANLFAAVSSSIFTRIMTLKTANEIWNFLKKKYEGNERVKGMQVL 116
Query: 116 ALRREFETLEMKSGE 130
L REFE M E
Sbjct: 117 NLIREFEMQRMNESE 131
>gi|359491406|ref|XP_002274613.2| PREDICTED: wall-associated receptor kinase-like 2-like [Vitis
vinifera]
Length = 902
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 40/170 (23%)
Query: 30 MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK-------------DLKVKNYLFQ 76
M+S++ W VE G+ P ++D + T+ +K K + + +F
Sbjct: 1 MQSEKVWNTVEFGWSPPK----VLDREGRPTNVIKPKLEWDRSENEASENNARAMYSIFN 56
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------ 130
AI I +AKE WD ++ EG VK S+LQ L FET+ M E
Sbjct: 57 AISTNEFRRIATCTSAKEAWDILQVTHEGTNAVKVSKLQMLTSRFETIRMDDHETFGEFN 116
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+L E+F V +IEESKD+DSL
Sbjct: 117 AKLMDIVNSSFNLGEPISNSKVVRKILRSLPERFRAKVTAIEESKDVDSL 166
>gi|224071601|ref|XP_002335934.1| predicted protein [Populus trichocarpa]
gi|222836445|gb|EEE74852.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M SE + + A P F G +Y W++ M+ ++ + + W VE Y+ P A K
Sbjct: 1 MNSEASVNLMAPPVFDGTNYQVWAVRMEAYLDANDQWEAVEDTYEVPLLPDNPTIAQMKN 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K K LF A+ +I I TA EIW+ +KK++EGN RVK Q+ L R
Sbjct: 61 HKESKQKKSKAKASLFAAVSSSIFTRIMTLKTANEIWNFLKKEYEGNERVKGMQVLNLIR 120
Query: 120 EFETLEMKSGE 130
EFE M E
Sbjct: 121 EFEMQRMNESE 131
>gi|357499555|ref|XP_003620066.1| hypothetical protein MTR_6g074980 [Medicago truncatula]
gi|355495081|gb|AES76284.1| hypothetical protein MTR_6g074980 [Medicago truncatula]
Length = 488
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKE--YWGLVETGYDEPASGSVLMDAHQK 58
M+ G+ ++P + V +Y +W M+ F+RS++ W ++E G P + + +
Sbjct: 7 MSEGGSATRPPLFEGVDYY-YWKDKMELFLRSQDNNMWPVIEEGNYTPYDEDLNVKKKED 65
Query: 59 MTDE---LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
++E L + K K +L A+ R D I++ + AKEIWD +K EG + VK++ +
Sbjct: 66 WSEEDGKRVLLNFKAKLFLTMALSREEFDRIQECNNAKEIWDTLKIHHEGTSHVKETTID 125
Query: 116 ALRREFETLEMK--------------------SGEEDVKI---VEKILRTLTEKFNDIVC 152
R+FE EMK S E+ + V KILR L + + IV
Sbjct: 126 IGVRKFELFEMKETETIDEMFGRFTIITNELRSLEKSFSVHDRVRKILRCLPKSWRHIVT 185
Query: 153 SIEESKDIDSL 163
+I E+KD++ L
Sbjct: 186 AITEAKDLNKL 196
>gi|224100319|ref|XP_002334387.1| predicted protein [Populus trichocarpa]
gi|222871597|gb|EEF08728.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 28/176 (15%)
Query: 15 FVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASG--SVLMDAHQKMTDELKLKDLKVK 71
F G +Y WS+ M F+ + + W +V D+P + + A K + E K K K K
Sbjct: 14 FTGENYHIWSVKMQAFLEAYDLWEIVSE--DKPVAPLPTYPTVAQIKFSSEEKAKKSKAK 71
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE- 130
+ + ++ ++I I ++AKE W+ +K++++G+ R+++ Q+ L+R+FE L M+ E
Sbjct: 72 SIIQNSVAKSIFYRIMACNSAKEAWNKLKEEYQGSDRIRQMQVLNLKRDFEALNMQEDET 131
Query: 131 ----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +IVEK+L TL E+F + S+EESKD+ +S
Sbjct: 132 ISKYSDRISLIINNIRLLGEDFPDSRIVEKVLVTLPERFESKISSLEESKDLSKIS 187
>gi|29423276|gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 5 GNFSQPAIPRFVGHYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
G ++P I +Y++W M F++S W V G++ P ++D K T+E
Sbjct: 8 GPVNRPPILDGT-NYEYWKARMVAFLKSLDSRTWKAVIKGWEHPK----MLDTEGKPTNE 62
Query: 63 LK-------------LKDLKVKNYLFQAIDRTILDTIRKKDTAKE-IWDAMKKKFEGNAR 108
LK L + K N LF +D+ I I AK+ + +K EG ++
Sbjct: 63 LKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDACGEILKTTHEGTSK 122
Query: 109 VKKSQLQALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTE 145
VK S+LQ L +FE L+MK E D K+V KILR+L +
Sbjct: 123 VKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERMTDEKLVRKILRSLPK 182
Query: 146 KFNDIVCSIEESKDIDSL 163
+F+ V +IEE++DI ++
Sbjct: 183 RFDMKVTAIEEAQDICNM 200
>gi|113205352|gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
Length = 1793
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 32/181 (17%)
Query: 28 NFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIR 87
+F+ + E W V A A K +E K K K K+ + A+ ++ I
Sbjct: 140 SFLEAYELWETVTEDKPLAALPENPTLAQIKSNNEEKTKKSKAKSLMQNAVADSVFYRIM 199
Query: 88 KKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS------------------- 128
TAKE WD +K++++G+ R ++ Q+ L+REFE L M+
Sbjct: 200 ACKTAKEAWDRLKEEYQGSDRTRQMQVLNLKREFECLNMQDDETISKYADRISLIVNNIR 259
Query: 129 --GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEE 184
GEE D +IVEK+L TL E+F + S E+SKD+ LS + L+GA + +
Sbjct: 260 LLGEEFTDKRIVEKVLVTLPERFESKISSFEKSKDLGKLS---------LGELMGALQAQ 310
Query: 185 E 185
E
Sbjct: 311 E 311
>gi|224092350|ref|XP_002334900.1| predicted protein [Populus trichocarpa]
gi|222832222|gb|EEE70699.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E +FS + P F G +Y W++ M+ ++ + + W VE Y+ + A K
Sbjct: 1 MEVETSFSHMSSPIFDGENYQLWAVKMETYLDAMDLWEAVEEDYEVHPLPNNPTVAQIKN 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K + K K LF A+ TI I + K++WD +KK++ G+ R++ Q L R
Sbjct: 61 HKERKTRKSKAKACLFAAVSTTIFTRIMSLQSVKDVWDYLKKEYAGDERIRGMQSLNLIR 120
Query: 120 EFETLEMKSGEEDVKIVEKIL 140
EFE MK E + +K+L
Sbjct: 121 EFELQRMKDSESIKEYSDKLL 141
>gi|222632658|gb|EEE64790.1| hypothetical protein OsJ_19646 [Oryza sativa Japonica Group]
Length = 570
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 41/170 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ M FMR++ W VE A +KM D++ L + QA
Sbjct: 307 NYGVWAVKMKIFMRAQGVWAAVEGNA-----------ADEKM-DQMALA------AIVQA 348
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ ++ I +K+TA+E WDA+K+ G RVKK+++Q L+R + M + E
Sbjct: 349 VPEAMVMAISEKETAREAWDALKQMNMGEERVKKARVQTLKRVLHGMYMGNSEKINDFAL 408
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
E+ +VEK+L ++ +KF ++ +IE+ D+ ++
Sbjct: 409 KVTTIVNEIHSLGTKVEETTVVEKLLHSVPDKFQSLISTIEQWGDVSEMT 458
>gi|224140935|ref|XP_002323832.1| predicted protein [Populus trichocarpa]
gi|222866834|gb|EEF03965.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
LF A+ +I I TA EIW+ +KK++EGN RVK Q+ L REFE M E
Sbjct: 31 LFVAVSSSIFIRIMTLKTANEIWNFLKKEYEGNERVKGMQVLNLIREFEMQRMNESETIK 90
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEA--- 167
D +IV+K+L + EKF + SIE SKD+ S++
Sbjct: 91 DYSDRLLDIVNKVRLLGTAFSDSRIVQKLLVIVPEKFEATISSIENSKDVSSITLAVLLN 150
Query: 168 EVKEDEVKTLLGAEEEEEAGKFAEHWT-------TSRKGSSNCHSTWKAQD 211
++ E + L+ E FA+ R G+ + H A++
Sbjct: 151 ALQAQEQRRLMRQASSVEGAFFAKSQNNIQQRNRNYRAGTQHFHHVLIAKN 201
>gi|90265095|emb|CAH67708.1| H0512B01.3 [Oryza sativa Indica Group]
Length = 1283
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 46/192 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS+LM ++++ W VE G + + M+A + +A
Sbjct: 63 NYTEWSLLMKVMLQARGLWDAVENGECDEQEDRMAMEA------------------ILRA 104
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ ++ + KD+AK+ WDA+K G RV+K++ Q LR E+E++ GE
Sbjct: 105 VPSEMISLLATKDSAKDAWDAIKVMRVGVDRVRKAKAQQLRWEYESISFHDGESIDDFAL 164
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
E+ ++EK LR + E+F+ I SIE D+ +L+ ED
Sbjct: 165 RLTSLVSQLGTLGERIEEQNVIEKFLRVVPERFSQIAMSIETLLDLSTLT-----IEDVT 219
Query: 175 KTLLGAEEEEEA 186
L AEE A
Sbjct: 220 GCLKVAEERRPA 231
>gi|224150528|ref|XP_002336971.1| predicted protein [Populus trichocarpa]
gi|222837480|gb|EEE75859.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS A P F G +Y W++ M+ ++ + + W VE Y+ PA + A K
Sbjct: 1 METEVSFSSIAPPVFNGDNYQFWAVRMETYLEALDLWEAVEEDYEIPALPNNPTMAQVKS 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVK 110
E K K K K LF A+ TI I TAKEIW+ +K ++EG+ K
Sbjct: 61 QKERKTKKSKAKACLFAAVASTIFTRIMSLKTAKEIWEFLKTEYEGDQEFK 111
>gi|77552771|gb|ABA95567.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1465
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 41/172 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W ++ GY E +D + + QA
Sbjct: 160 NYPDWALLMRVSLQAQGLWTAIDPGYAE------------------NREDHAALSAILQA 201
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ R +L + K DTAK WDA+K G RV++++ Q R+FE++ K GE
Sbjct: 202 VPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFCRQFESMRFKEGERPEEFAM 261
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
ED + +K+LR + +K+ + S+E+ DI +++ E
Sbjct: 262 RLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDIKTMALE 313
>gi|356498286|ref|XP_003517984.1| PREDICTED: uncharacterized protein LOC100818867 [Glycine max]
Length = 135
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 23/87 (26%)
Query: 101 KKFEGNARVKKSQLQALRREFETLEMKSGE-----------------------EDVKIVE 137
KKF NAR K S +Q+LR +F+ LEMK GE ++V IV+
Sbjct: 2 KKFGWNAREKYSNMQSLRMDFDVLEMKVGETLTKYRAQVMGLAKKMRSNEGYMKEVTIVK 61
Query: 138 KILRTLTEKFNDIVCSIEESKDIDSLS 164
KILR+LT+KFN +V SIE+SKDID L+
Sbjct: 62 KILRSLTKKFNYVVVSIEKSKDIDKLT 88
>gi|359473531|ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251075 [Vitis vinifera]
Length = 2818
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 40/170 (23%)
Query: 30 MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK-------------DLKVKNYLFQ 76
M+S++ W VE G+ P ++D + T+ +K K + + +F
Sbjct: 1 MQSEKVWNTVEFGWSPPK----VLDREGRPTNVIKPKLEWDRSENEASENNARAMYSIFN 56
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------ 130
AI I +AKE WD ++ EG VK S+LQ L FET+ M E
Sbjct: 57 AISTDEFRRIATCTSAKEAWDILQVTHEGTNVVKVSKLQMLTSRFETIRMDDHETFGEFN 116
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+L E+F V +IEESKD+DSL
Sbjct: 117 AKLMDIVNSSFNLGEPISNSKVVRKILRSLPERFRAKVTAIEESKDVDSL 166
>gi|356537446|ref|XP_003537238.1| PREDICTED: uncharacterized protein LOC100775601 [Glycine max]
Length = 554
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQK 58
M E +FS + F G + D W + M ++M S + W +VE Y+ P + M A K
Sbjct: 1 MEGEASFSHITLAIFDGENCDIWEVKMQSYMESLDLWDVVEEDYEIYPLPENPTM-AQIK 59
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K+K K + LF + + I I + K IWD +K+++ G+ R++ Q+ LR
Sbjct: 60 NHKERKMKKEKARLCLFTGVSQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLR 119
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLL 178
REFE M+ + + K+L + K I I ++ + +L + E + L+
Sbjct: 120 REFELQRMEESKTIKEYSNKLL-GIANKIKLICQKITLAEVLHALQAQ------EQRRLM 172
Query: 179 GAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
+ E A+H +K C K FR
Sbjct: 173 RQDRVVEGALPAKHHEDKKKNYPPCQHCGKKGHAPFR 209
>gi|147840287|emb|CAN63990.1| hypothetical protein VITISV_016158 [Vitis vinifera]
Length = 897
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 68/211 (32%)
Query: 3 SEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
S N IP F G HY W++ M ++RS+ W +V + + P G+
Sbjct: 2 STSNSISSVIPMFNGEHYHIWAVKMRFYLRSQGLWNVVMSEANPPPLGA----------- 50
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
+WD ++ +FEG+ RVK +L L+REF
Sbjct: 51 ------------------------------NPTVWDKLQGEFEGSDRVKTVRLLTLKREF 80
Query: 122 ETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESK 158
E ++MK E D K+VEKI+ ++ +KF + +IEES
Sbjct: 81 ELMKMKKNESVKDYSSRLMDVVNQMRLVGEAFTDQKVVEKIMVSVPQKFEAKISAIEESC 140
Query: 159 DIDSLS---EEAEVKEDEVKTLLGAEEEEEA 186
D+ SL+ +++ E + L+ +E EA
Sbjct: 141 DLQSLTIAELTSKLHAXEQRVLMRGDEXTEA 171
>gi|38194925|gb|AAR13313.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 529
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 11 AIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
A P F G Y W++ M+ ++ + + W VE Y+ + A K + K+K K
Sbjct: 2 APPVFDGDSYQMWAVRMETYLEALDLWEAVEEDYEIQSLPENPTVAQIKSQKDKKMKRSK 61
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
K LF A+ + I +AKEIWD +K ++EG+ R++ Q L REFE +MK
Sbjct: 62 AKACLFAAVSPMVFTRIMSLKSAKEIWDYLKAEYEGDERIRGMQALNLIREFELQKMKES 121
Query: 130 EEDVKIVEKILRTLTEKFNDI 150
E + +++L + D+
Sbjct: 122 ESIKEYSDRLLTIANKNTKDL 142
>gi|147862556|emb|CAN81496.1| hypothetical protein VITISV_031970 [Vitis vinifera]
Length = 1116
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 87/218 (39%), Gaps = 70/218 (32%)
Query: 2 TSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
TS FS IP F G HY W++ M ++RS+ W +V D P G+ +
Sbjct: 3 TSSSTFS--VIPVFNGEHYHTWAIKMRFYLRSQGLWNVVMYEVDPPPLGANPI------- 53
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+WD ++ +FEG+ RVK +L L+RE
Sbjct: 54 ----------------------------------VWDKLQGEFEGSDRVKTVRLLTLKRE 79
Query: 121 FETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEES 157
FE ++MK E D K+VEKI+ + +KF + IEES
Sbjct: 80 FELMKMKDNESMKDYSSRLMDVVNQMKLLGEAXTDQKVVEKIMVLVPQKFEAKISVIEES 139
Query: 158 KDIDSLS---EEAEVKEDEVKTLLGAEEEEEAGKFAEH 192
D+ SL+ +++ E + L+ +E + A H
Sbjct: 140 CDLQSLTIAELTSKLHAXEXRVLMRGDEATKGAFQANH 177
>gi|116309563|emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
Length = 1426
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 50/217 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W ++ GY E +D + + QA
Sbjct: 60 NYPDWALLMRVNLQAQGLWTAIDPGYAE------------------FREDRAALSAILQA 101
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ R +L + K DTAK WDA+K G RV++++ Q RR+FE++ K E
Sbjct: 102 VPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFRRQFESMRFKERETPEEFAM 161
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS-EEAEVKEDE 173
ED + +K+LR + +K+ + S+E+ D+ +++ EE +
Sbjct: 162 RLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALEELVGRLST 221
Query: 174 VKTLLGAEEEEEAGKFA---EHWTTSRK-----GSSN 202
V + EE + GK E W K GS N
Sbjct: 222 VDSYSDDEEGSDGGKLYLTEEQWQARVKQREQEGSGN 258
>gi|440577427|emb|CCI55449.1| PH01B001E05.5 [Phyllostachys edulis]
Length = 303
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 41/184 (22%)
Query: 4 EGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL 63
EG+ S P +Y W+M M FM ++ W + DE S + D++
Sbjct: 31 EGSISLPYPMLTRSNYTTWAMKMKVFMCTQGVWNAI---VDEEVS---------ERQDQM 78
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
L +F A+ + +L + +K+TAKE W+ + G RV+++++Q L+ EF+
Sbjct: 79 ALA------AIFLAVPKDMLMLLAEKETAKETWNTLNMMHLGADRVREARVQNLKSEFDN 132
Query: 124 LEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
L M+ E E+V IV K LR ++ KF+ I +IE+ DI
Sbjct: 133 LHMRDTEQIDDFTMGLMTIVSKIRGLGDKMEEVYIVRKFLRAVSRKFSPIASTIEQFGDI 192
Query: 161 DSLS 164
++S
Sbjct: 193 KNMS 196
>gi|357470847|ref|XP_003605708.1| hypothetical protein MTR_4g037310 [Medicago truncatula]
gi|355506763|gb|AES87905.1| hypothetical protein MTR_4g037310 [Medicago truncatula]
Length = 367
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 33/193 (17%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKE--YWGLVETG----YDEPASGSVLM 53
M+ G+ ++P P F G Y +W M+ F++S++ W +VE G YDE +
Sbjct: 7 MSEGGSSNRP--PLFEGTDYYYWKGKMELFLQSQDNHMWTVVENGNYIPYDEDLNEKKKE 64
Query: 54 DAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
D ++ + L + K K +L A+ R D +++ AKEIWD +K EG + VK+++
Sbjct: 65 DWSEEEGKRMLL-NFKAKLFLTMALSREEYDRVQECKNAKEIWDTLKVHHEGTSHVKETR 123
Query: 114 LQALRREFETLEMK--------------------SGEEDVKIVE---KILRTLTEKFNDI 150
+ R+FE EMK S E+D I E KILR L + I
Sbjct: 124 IDIGVRKFELFEMKETETIDEMYGRFTIIMNELRSLEKDFTIHERVIKILRCLPRSWRHI 183
Query: 151 VCSIEESKDIDSL 163
V +I E+KD+ L
Sbjct: 184 VTAITEAKDLKKL 196
>gi|21741247|emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
Length = 1425
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 41/172 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W ++ GY E +D + + QA
Sbjct: 60 NYPDWALLMRVNLQAQGLWTAIDPGYAE------------------FREDRAALSAILQA 101
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ R +L + K DTAK WDA+K G RV++++ Q RR+FE++ K E
Sbjct: 102 VPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFRRQFESMRFKERETPEEFAM 161
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
ED + +K+LR + +K+ + S+E+ D+ +++ E
Sbjct: 162 RLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALE 213
>gi|226529173|ref|NP_001150961.1| retrotransposon protein [Zea mays]
gi|195643232|gb|ACG41084.1| retrotransposon protein [Zea mays]
Length = 262
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 39/180 (21%)
Query: 11 AIPRFV-GHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
A P V Y W++ ++ + ++ W V PA+G+ + D + T
Sbjct: 16 AYPVLVPASYTAWAIKVEANLDAQGLWEAVA-----PAAGTTV-DVQKSKT--------- 60
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
+ L QA+ IL + K TAKE+WD++K ++ G RVK ++L L+ EF+ L M+ G
Sbjct: 61 ARAVLLQALPEDILLQVSSKLTAKEVWDSLKSRYVGADRVKSARLATLKGEFDRLFMEDG 120
Query: 130 E-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
E +D +V+K+L T+ ++ V IE+ D+D + E
Sbjct: 121 EALDVYAGKIGGMAARYIALGATLDDATMVKKLLDTVPDRLYPAVAGIEQFCDVDKMPFE 180
>gi|357440453|ref|XP_003590504.1| hypothetical protein MTR_1g066510 [Medicago truncatula]
gi|355479552|gb|AES60755.1| hypothetical protein MTR_1g066510 [Medicago truncatula]
Length = 114
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 55/130 (42%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M F+ P I +F G YDHW+ LM+N
Sbjct: 1 MADHHPFTPPKISKFDGFYDHWTELMEN-------------------------------- 28
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
LK+KDLKVKNYL Q+IDR+I++TI VK++QLQAL +
Sbjct: 29 --LKIKDLKVKNYLSQSIDRSIMETI---------------------LVKRAQLQALCAK 65
Query: 121 FETLEMKSGE 130
FE L MK E
Sbjct: 66 FEALSMKEDE 75
>gi|108862332|gb|ABA96719.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1795
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
++L+D + + L A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E
Sbjct: 407 VRLQDRRALDALIAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWE 466
Query: 123 TLEMKSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESK 158
L K GE ++ + VEK+ R + EK+ I SIE
Sbjct: 467 NLAFKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLL 526
Query: 159 DIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
D+ ++S E + +K + G E + +G E W S RKG S+
Sbjct: 527 DLSTMSIEEAL--GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDRRKGESS 581
>gi|147792922|emb|CAN66530.1| hypothetical protein VITISV_039027 [Vitis vinifera]
Length = 230
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 34/170 (20%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ +T + K K L A
Sbjct: 17 NYETWAVRMTVHLQALDVWEAVEENYEVPPLGA------NPIT-----RKAKAKACLLAA 65
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +IL I K D+A +IW+ +K++++GN R+K ++ L EFE +MK
Sbjct: 66 VSPSILIKIMKIDSAAKIWEYLKEEYKGNERIKNMKVMNLILEFEMKKMKESDAVKDYGA 125
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 126 QLLSIADKVRLLGKEFSNKKIVQKILVTLPEKYEATISSLENSKDLSTIS 175
>gi|224088017|ref|XP_002308292.1| predicted protein [Populus trichocarpa]
gi|222854268|gb|EEE91815.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 29/164 (17%)
Query: 26 MDNFMRSKEYWGLVETGYDE---PASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTI 82
M+ ++ + + W VE Y+ P + +V A K E K + K K LF + TI
Sbjct: 1 METYLDALDLWEAVEDDYEVHLLPTNPTV---AQIKNHKERKTRKSKAKACLFVVVSTTI 57
Query: 83 LDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------ 130
I +AK++WD +KK++ G+ R++ Q L REFE MK E
Sbjct: 58 FTRIISLKSAKDVWDYLKKEYAGDERIRGMQSLNLIREFELQRMKDSETIKEYSDRLLGI 117
Query: 131 -----------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
D +IVEKIL T+ E++ + ++E +KD+ +
Sbjct: 118 VNKVRLLGTDFSDCRIVEKILVTVPERYEASITTLENTKDLSKI 161
>gi|78708561|gb|ABB47536.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 155
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 15/113 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W + + M + W +E PA+G+ + D KD K K++L Q+
Sbjct: 28 NYTSWVIRVQAMMEDQGIWEAIE-----PAAGAAV-DPR---------KDKKAKSHLLQS 72
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
+ +L + KK +AKE+WD +K +F G RV+ ++LQ L+ EF ++ M++GE
Sbjct: 73 LPEDLLMQVAKKRSAKEVWDCLKTRFVGVDRVRDARLQTLKGEFTSMVMEAGE 125
>gi|115476244|ref|NP_001061718.1| Os08g0389500 [Oryza sativa Japonica Group]
gi|113623687|dbj|BAF23632.1| Os08g0389500 [Oryza sativa Japonica Group]
Length = 1453
Score = 63.2 bits (152), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 40/173 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK-NYLFQ 76
+YD W+MLM M + W VE DE E++ +D ++ + +
Sbjct: 58 NYDEWAMLMQVNMEAAGIWYAVEPYPDE----------------EVEYRDDRLALAAILR 101
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------ 130
++ +L T+R K +A+ WDA+K G RV++S+ Q LRREF L K GE
Sbjct: 102 SVPSEMLPTLRGKRSARAAWDAIKTIRVGVERVRESKAQQLRREFAALTWKEGETAEDFS 161
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D +V K+L + E I ++E D++++S E
Sbjct: 162 VRITGLANNLRTLGDNISDADVVRKMLDVVPEHLEQIAVAVETLLDLNTVSVE 214
>gi|54287639|gb|AAV31383.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1028
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 38/153 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W + + M + W ++E PA+G+ + D KD K K++L Q+
Sbjct: 28 NYTSWVIRVQAMMEDQGIWEVIE-----PAAGAAV-DPR---------KDKKAKSHLLQS 72
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ +L + KK TAKE+WD +K +F RV+ ++LQ ++ EF ++ M++GE
Sbjct: 73 LPEDLLMQVAKKRTAKEVWDCLKTRFVRADRVRDARLQTMKGEFASMVMEAGESLDQYAG 132
Query: 132 -----------------DVKIVEKILRTLTEKF 147
D +V+K+ T+ EKF
Sbjct: 133 RITTMGVRHSALGATLNDAAMVKKLFDTVPEKF 165
>gi|77548291|gb|ABA91088.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1399
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W ++ GY E +D + + QA
Sbjct: 160 NYPDWALLMRVSLQAQGLWTAIDPGYAE------------------NREDHAALSAILQA 201
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ R +L + K DTAK WDA+K G RV++++ Q RR+FE++ K GE +
Sbjct: 202 VPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFRRQFESMRFKEGERPEEFAM 261
Query: 138 KILRTLTE------------KFNDIVCSIEESKDIDSLSEE 166
++ + + K+ + S+E+ DI +++ E
Sbjct: 262 RLTAVVADIRDMGGVMEDEHKYKPVAISLEQLLDIKTMALE 302
>gi|38345433|emb|CAE03285.2| OSJNBb0046P18.1 [Oryza sativa Japonica Group]
Length = 1349
Score = 62.8 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W ++M M+++ WG VE G L+D Q D + + +A
Sbjct: 119 NYQDWVLVMRVNMQAQGLWGAVE------PEGDDLVDYRQ---------DRQALTAILRA 163
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +L T+ K+T +E W+A+K + G V+++ Q LRREF + K GE
Sbjct: 164 VPAEMLATLAVKETVQEAWEAIKTRRIGVQHVREANAQQLRREFGDIIFKDGETVDDFSM 223
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D ++V+K+L+ + E I SIE D++ LS E
Sbjct: 224 RIGVLANNLRTLGDNITDAEVVQKLLQVVPEHLQQIAISIETLLDVNELSLE 275
>gi|242080049|ref|XP_002444793.1| hypothetical protein SORBIDRAFT_07g028153 [Sorghum bicolor]
gi|241941143|gb|EES14288.1| hypothetical protein SORBIDRAFT_07g028153 [Sorghum bicolor]
Length = 1288
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 48/198 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS M M++++ W VE G P D + + +
Sbjct: 127 NYYEWSQTMKLRMQARDLWEAVEGG---PVQYR---------------DDRRALEVIVAS 168
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ + + + K TAKE WDA+ G RV+++ LQ LRRE+E +++K GE
Sbjct: 169 VPKELGLPLLDKATAKEAWDAIAATRIGVDRVRRATLQRLRREWENMDVKPGEPVEDFAL 228
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
++ ++VEK LRT+ K+ IV +IE+ D ++LS E E
Sbjct: 229 RLSTLHQQLVLHGDRDIDEKRVVEKFLRTVPAKYAQIVVAIEQFLDFEALSLE------E 282
Query: 174 VKTLLGAEEEEEAGKFAE 191
V L A +E EA E
Sbjct: 283 VTGRLKAVDEREAQAVTE 300
>gi|284434528|gb|ADB85284.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 385
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 59/213 (27%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
T +G FS + +Y W+M M MR++ WG+V+
Sbjct: 145 TRDGPFSLLYLVLTTDNYLVWAMKMKANMRAQGVWGVVDP-------------------- 184
Query: 62 ELKLKDLKVKN--------YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
K KD +V N ++QA+ +++ + K+TA+E+W ++K EG RVK+ +
Sbjct: 185 --KAKDKEVDNKVDHTALAIIYQAVPDSMMRQLISKETAREVWVTLQKMHEGVDRVKEVR 242
Query: 114 LQALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDI 150
LQ L EFE L+M + E+ V+K LR L E F +
Sbjct: 243 LQNLHTEFENLQMGETQSVDEFVGKLSSLYNQIVSLGDKIEESVAVKKYLRVLLENFVPV 302
Query: 151 VCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEE 183
V ++ S D++ E K +E+ L A EE
Sbjct: 303 VTTLIYSPDLE------EKKIEEITGSLKAHEE 329
>gi|147839964|emb|CAN77177.1| hypothetical protein VITISV_021789 [Vitis vinifera]
Length = 474
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MTS+ + + A P F G +Y W + M+ ++ + + W V Y+ P+ A K+
Sbjct: 1 MTSKASLNALAPPVFDGINYQVWVVHMEAYLDASDLWEAVSEEYEVPSLFDNPTMAQIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVK 110
+E + + K K+ LF AI TI I T EIW+ +KK++EGN +VK
Sbjct: 61 HNERRQRKSKAKSSLFAAISSTIFTRIMTLKTTNEIWNVLKKEYEGNEQVK 111
>gi|115481010|ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|31430018|gb|AAP51989.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113638707|dbj|BAF26012.1| Os10g0130700 [Oryza sativa Japonica Group]
Length = 1426
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 50/217 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W ++ GY E +D + + QA
Sbjct: 60 NYPDWALLMRVNLQAQGLWTAIDPGYAE------------------FREDRAALSAILQA 101
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ R +L + K DTAK WDA+K G RV++++ + RR+FE++ K E
Sbjct: 102 VPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEKGFRRQFESMRFKERETPEEFAM 161
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS-EEAEVKEDE 173
ED + +K+LR + +K+ + S+E+ D+ +++ EE +
Sbjct: 162 RLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALEELVGRLST 221
Query: 174 VKTLLGAEEEEEAGKFA---EHWTTSRK-----GSSN 202
V + EE + GK E W K GS N
Sbjct: 222 VDSYSDDEEGSDGGKLYLTEEQWQARVKQREQEGSGN 258
>gi|147862182|emb|CAN80477.1| hypothetical protein VITISV_032838 [Vitis vinifera]
Length = 464
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E K + KVK LF A
Sbjct: 17 NYETWAVRMTIHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERKTRKAKVKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
I +IL I K D+A EIW+ +K++++ + R+K Q RR
Sbjct: 77 ISPSILIKIMKIDSATEIWEYLKEEYKEDERIKNMQAMEQRR 118
>gi|147801935|emb|CAN66074.1| hypothetical protein VITISV_026160 [Vitis vinifera]
Length = 550
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E K + KVK LF A
Sbjct: 17 NYETWAVRMTIHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERKTRKAKVKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
I +IL I K D+A EIW+ +K++++ + R+K Q RR
Sbjct: 77 ISPSILIKIMKIDSATEIWEYLKEEYKEDERIKNMQAMEQRR 118
>gi|357501909|ref|XP_003621243.1| Starch synthase [Medicago truncatula]
gi|355496258|gb|AES77461.1| Starch synthase [Medicago truncatula]
Length = 357
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 30/156 (19%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAI 78
+ WS LM + ++E LV+ GYD+ ++ M +++ +K
Sbjct: 60 WKRWSALMKSLFGAQEVLELVQNGYDDLGIATIC-----SMFNKMLIK------------ 102
Query: 79 DRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE- 137
I + I K +KE WD + K +E + VK+ +LQ+LRR++E + M EE+ +I +
Sbjct: 103 --IIFEKISKITRSKEAWDILVKYYEDSDNVKQVKLQSLRRKYELMLM---EEEQRINDY 157
Query: 138 -------KILRTLTEKFNDIVCSIEESKDIDSLSEE 166
KI+R+LT KF+ IV + E+KD+ ++ E
Sbjct: 158 FSKLLCVKIMRSLTSKFDFIVLARREAKDVKTMKIE 193
>gi|147859486|emb|CAN81436.1| hypothetical protein VITISV_010701 [Vitis vinifera]
Length = 327
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 32/186 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSK--EYWGLVETGYDEPAS--GSVLMDAHQKMTDELKLKD 67
P F+G Y +W M F++S + W ++E G P+ V++ + DEL K
Sbjct: 19 PIFMGTDYPYWKTKMTWFIQSTSLDLWDVIEDGPHIPSKLENGVMVPKLKHEWDELDRKK 78
Query: 68 LKVKN----YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
+++ L AIDR + I +AKEIW ++ +EGN +VK+S++ L ++E
Sbjct: 79 IQLNAKAVFILHCAIDRNEFNRIWHCKSAKEIWKLLEVTYEGNDQVKESKINILMHDYEL 138
Query: 124 LEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCSIEESKDI 160
+K E V++ V KILR+L K+ V +I+E+KD+
Sbjct: 139 FSIKDFESIVEMFSRFLVIVNKLEALGKTFTEVEKVMKILRSLPRKWETKVTTIQEAKDL 198
Query: 161 DSLSEE 166
LS E
Sbjct: 199 TKLSLE 204
>gi|116311092|emb|CAH68021.1| H0807C06-H0308C08.8 [Oryza sativa Indica Group]
Length = 859
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W ++M M+++ WG VE G L+D Q D + + +A
Sbjct: 119 NYQDWVLVMRVNMQAQGLWGAVE------PEGDDLVDYRQ---------DRQALTAILRA 163
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +L T+ K+T +E W+A+K + G V+++ Q LRREF + K GE
Sbjct: 164 VPAEMLATLAVKETVQEAWEAIKTRRIGVQHVREANAQQLRREFGDILFKDGETVDDFSM 223
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+ ++V+K+L+ + E I SIE D++ LS E
Sbjct: 224 RIGVLANNLRTLGDNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNELSLE 275
>gi|38344222|emb|CAE03692.2| OSJNBb0026E15.10 [Oryza sativa Japonica Group]
Length = 1449
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 38/172 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+++M M+++ WG VE G L+D Q D + + +A
Sbjct: 56 NYQDWALVMRVNMQAQCLWGAVE------PEGDDLVDYRQ---------DQQALAAILRA 100
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +L T+ K+TA+E W+A+K + G RV+++ Q LRREF + K E
Sbjct: 101 VPAEMLATLAVKETAQEAWEAIKTRRIGVQRVREANAQQLRREFGDILFKDDETVDDFSM 160
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+ ++V+K+L+ + E I SIE D++ LS E
Sbjct: 161 RIGGLANNLRTLGDNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNELSLE 212
>gi|32488778|emb|CAE04331.1| OSJNBb0016D16.22 [Oryza sativa Japonica Group]
gi|38346705|emb|CAE04855.2| OSJNBa0086O06.3 [Oryza sativa Japonica Group]
Length = 1498
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 63/225 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 186 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 224
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 225 IAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 284
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK R + EK+ I SIE D+ ++S E +
Sbjct: 285 FALRLNTLLQKMVQYGDDTYDEERAVEKFFRCVPEKYRQIARSIESLLDLSTMSIEEAL- 343
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
+K + G E + +G E W S RKG S+
Sbjct: 344 -GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDGRKGESS 387
>gi|77553830|gb|ABA96626.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1629
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 43/174 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET-GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM ++++ W ++ G D P H+ D + L + +
Sbjct: 53 NYNDWALLMKIKLQARCLWAAIKPDGVDVPL--------HE---DRMAL------DAICS 95
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV--- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + G+E V
Sbjct: 96 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRAEYESLAFR-GDETVEDF 154
Query: 134 ---------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
K+VEK LR +FN ++ SIE DI +LS E
Sbjct: 155 ALRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 208
>gi|62732947|gb|AAX95066.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77548827|gb|ABA91624.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1385
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 41/172 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ WS+LM ++++ WG ++ G E + +DA +
Sbjct: 32 NYNVWSLLMKIKLQARCLWGAIDPGEVELHEDRMTLDA------------------ICSV 73
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ ++ T+ K+TAK WD +K N R++K+ Q LR E+E L + GE
Sbjct: 74 VPAEMISTLATKETAKAAWDCIKTMRVVNDRIRKASAQKLRSEYEALAFRDGESVEDFAM 133
Query: 132 -----------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D K+VEK L +F+ +V SIE DI +L+ E
Sbjct: 134 RLNTVVTQLSTLGDPEPDDKVVEKYLCVARPRFSQLVLSIETLLDISTLTLE 185
>gi|242063996|ref|XP_002453287.1| hypothetical protein SORBIDRAFT_04g003280 [Sorghum bicolor]
gi|241933118|gb|EES06263.1| hypothetical protein SORBIDRAFT_04g003280 [Sorghum bicolor]
Length = 758
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGS------VLMDAHQKMTDELKLKDLKVK 71
+Y WS M M++++ W +E G++ G L + + D +
Sbjct: 141 NYYEWSQTMKLRMQARDLWDAIEGGWERKREGEQGLLTWCLCAGANSGPVQFR-DDRRAL 199
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
+ A+ + + + K TAKE WDA+ G RV+++ LQ LRR++E + + GE+
Sbjct: 200 EVIVGAVPKEMGIPLLDKATAKEAWDAIAATRIGVDRVRRATLQRLRRDWENISVNPGEQ 259
Query: 132 ---------------------DV---KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D+ ++VEK LRT+ K+ IV +IE+ D ++L+ E
Sbjct: 260 VEDFAMRLSTLHQQLVIHGDKDITEERVVEKFLRTVPAKYAQIVVAIEQFLDFEALTLE 318
>gi|224097065|ref|XP_002334645.1| predicted protein [Populus trichocarpa]
gi|222873930|gb|EEF11061.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 29/125 (23%)
Query: 90 DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------------------ 131
D+AK IWD +KK+++GN R K Q+ L REFE +MK E
Sbjct: 4 DSAKGIWDYLKKEYQGNERTKNMQVLNLIREFEMQKMKETENIKDYADRLLSIINKVRLL 63
Query: 132 -----DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEEA 186
D +IV+KIL T+ EK+ + S+EESKD+ S+S E+ L A+E+ +
Sbjct: 64 GKEFSDDRIVQKILVTMPEKYESKISSLEESKDLTSIS------LGELTNALQAQEQRRS 117
Query: 187 GKFAE 191
+ E
Sbjct: 118 MRLEE 122
>gi|147821769|emb|CAN77162.1| hypothetical protein VITISV_029831 [Vitis vinifera]
Length = 1434
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+F AI I +AKE WD ++ EG VK S+LQ L FET+ M E
Sbjct: 821 IFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAVKVSKLQMLTSRFETIRMDDHENFG 880
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+L E+F V +IEESKD+DSL
Sbjct: 881 EFYAKLMDIVNSSFNLGEPIPNSKVVRKILRSLPERFRAKVTAIEESKDVDSL 933
>gi|13129455|gb|AAK13113.1|AC080019_5 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
Length = 893
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 24/151 (15%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+ QA+ R +L + K DTAK WDA+K G RV +++ Q RR+FE + K GE
Sbjct: 31 ILQAVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVSEAREQGFRRQFEAMRFKDGETPE 90
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
ED I +K+LR + +K+ + S+E+ D+ +++ E ++
Sbjct: 91 EFAMRLTAIVADMRNMGGVMEDEHINKKLLRVVPKKYKPVAISLEQLLDVKTMALEELIE 150
Query: 171 -EDEVKTLLGAEEEEEAGKFAEHWTTSRKGS 200
V + EE + GK + S GS
Sbjct: 151 WLSTVDSYSDDEEASDGGKLSSGRPVSSSGS 181
>gi|147834092|emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
Length = 1885
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 32/193 (16%)
Query: 6 NFSQPAIPRFVGH-YDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMT 60
NFS+ P F G Y +W M F++S + W ++E G P VL+ +K
Sbjct: 12 NFSKHRAPFFTGTDYPYWKARMTWFLQSTDLDVWDVIEDGPTFPTKLVDGVLVPKPKKEW 71
Query: 61 DELKLKDLKVKN---YLFQ-AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL ++ ++ + Q A+DR + I + +AKEIW ++ EG +VK+S++
Sbjct: 72 NELDRRNFQLNAKAVFTLQCAMDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINI 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L +E MK E V++ V KILR+L K++ V +
Sbjct: 132 LVHNYELFSMKETETIVEMITRFTEIVNGLEALGRVINESEKVMKILRSLPSKWHTKVTA 191
Query: 154 IEESKDIDSLSEE 166
I+E+KD+ L E
Sbjct: 192 IQEAKDLTKLPME 204
>gi|38567926|emb|CAE03978.3| OSJNBa0033H08.2 [Oryza sativa Japonica Group]
Length = 1479
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 49/199 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET-GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM ++++ W +E G D P +D + +
Sbjct: 93 NYNDWALLMKIKLQARCLWAAIEPDGVDVPLH-----------------EDRMALDAICS 135
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + E ED
Sbjct: 136 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRAEYESLAFRGDETVEDFA 195
Query: 134 --------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
K+VEK LR +FN ++ SIE DI +LS E E
Sbjct: 196 LRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME------E 249
Query: 174 VKTLLGAEEEEEAGKFAEH 192
V L A E++G+ + H
Sbjct: 250 VTGRLKA--AEDSGQSSSH 266
>gi|147811749|emb|CAN59755.1| hypothetical protein VITISV_034567 [Vitis vinifera]
Length = 1333
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 4 EGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
E +F+ A P F G +Y W+ M +++ + W +E Y G+ A K E
Sbjct: 3 EASFTT-APPVFNGENYQTWAXRMTVHLQALDVWEAIEEDYXISPLGANPTVAQMKNHKE 61
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
K + K K LF A+ IL I + ++A EI + ++++GN RV+ Q+ L REFE
Sbjct: 62 KKTRXAKAKACLFSAVSPLILTRIMQLESAAEIXKHLXEEYQGNERVRNMQVMNLIREFE 121
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+ MK + D ++V+K TL EK+ + +E +KD
Sbjct: 122 MVRMKESQTIKDYAEQLLTIANKVRLLGKEFSDERVVQKFFVTLPEKYEATISFLENTKD 181
Query: 160 IDSLS 164
+ S++
Sbjct: 182 LSSIT 186
>gi|116309068|emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group]
gi|116309095|emb|CAH66202.1| OSIGBa0148D14.8 [Oryza sativa Indica Group]
Length = 1439
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 49/199 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET-GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM ++++ W +E G D P +D + +
Sbjct: 53 NYNDWALLMKIKLQARCLWAAIEPDGVDVPLH-----------------EDRMALDAICS 95
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + E ED
Sbjct: 96 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRAEYESLAFRGDETVEDFA 155
Query: 134 --------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
K+VEK LR +FN ++ SIE DI +LS E E
Sbjct: 156 LRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME------E 209
Query: 174 VKTLLGAEEEEEAGKFAEH 192
V L A E++G+ + H
Sbjct: 210 VTGRLKA--AEDSGQSSSH 226
>gi|147819719|emb|CAN73575.1| hypothetical protein VITISV_008297 [Vitis vinifera]
Length = 357
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+F AI I +AKE WD ++ EG VK S+LQ L FET+ M E
Sbjct: 4 IFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAVKVSKLQMLTSRFETIRMDDHETFG 63
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+L E+F V +IEESKD+DSL
Sbjct: 64 EFNAKLMDIVNSSFNLGEPISNSKVVRKILRSLPERFRAKVTAIEESKDVDSL 116
>gi|297612304|ref|NP_001068391.2| Os11g0656500 [Oryza sativa Japonica Group]
gi|108864629|gb|ABA95163.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|255680327|dbj|BAF28754.2| Os11g0656500 [Oryza sativa Japonica Group]
Length = 1400
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 49/199 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM ++++ W +E G D P +D + +
Sbjct: 53 NYNDWALLMKIKLQARCLWAAIEPDGVDVPLH-----------------EDRMALDAICS 95
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + E ED
Sbjct: 96 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRSEYESLAFRGDETVEDFA 155
Query: 134 --------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
K+VEK LR +FN ++ SIE DI +LS E E
Sbjct: 156 LRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME------E 209
Query: 174 VKTLLGAEEEEEAGKFAEH 192
V L A E++G+ + H
Sbjct: 210 VTGRLKA--AEDSGQSSSH 226
>gi|108862774|gb|ABA98827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1269
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 40/160 (25%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS+LM ++++ W VETG + + ++A + +A
Sbjct: 57 NYSDWSLLMRVMLQARGLWEAVETGDVDFQEDRMALEA------------------VLKA 98
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +L + K+TAK+ WDA+K G RV+KS+ Q LR++F+ E K GE
Sbjct: 99 VPADLLPVLAVKETAKDAWDAIKTMRVGVDRVRKSKAQELRKQFDANEFKEGESVEFSVR 158
Query: 131 ---------------EDVKIVEKILRTLTEKFNDIVCSIE 155
E+ K+ EK L + + I SIE
Sbjct: 159 LSGLVNNLAVLGFQLEESKVCEKFLHVVPDHLEQIALSIE 198
>gi|12597892|gb|AAG60200.1|AC084763_20 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1611
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 63/225 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 195 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 233
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 234 IAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 293
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK+ R + EK+ I SIE D+ ++S E +
Sbjct: 294 FALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEAL- 352
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
+K + G E +G E W S RKG S+
Sbjct: 353 -GRLKVVDGDEPRPLSGPITIGGKLHLTREQWEASQGDGRKGESS 396
>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
Length = 1487
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 63/225 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 185 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 223
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 224 IAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 283
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK+ R + EK+ I SIE D+ ++S E +
Sbjct: 284 FALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEAL- 342
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
+K + G E +G E W S RKG S+
Sbjct: 343 -GRLKVVDGDEPRPLSGPITIGGKLHLTREQWEASQGDGRKGESS 386
>gi|22758275|gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1586
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 63/225 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 185 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 223
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 224 IAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 283
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK+ R + EK+ I SIE D+ ++S E +
Sbjct: 284 FALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEAL- 342
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
+K + G E +G E W S RKG S+
Sbjct: 343 -GRLKVVDGDEPRPLSGPITIGGKLHLTREQWEASQGDGRKGESS 386
>gi|115486633|ref|NP_001068460.1| Os11g0682500 [Oryza sativa Japonica Group]
gi|113645682|dbj|BAF28823.1| Os11g0682500, partial [Oryza sativa Japonica Group]
Length = 1457
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 49/199 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET-GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM ++++ W +E G D P +D + +
Sbjct: 81 NYNDWALLMKIKLQARCLWAAIEPDGVDVPLH-----------------EDRMALDAICS 123
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + E ED
Sbjct: 124 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRAEYESLAFRGDETVEDFA 183
Query: 134 --------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
K+VEK LR +FN ++ SIE DI +LS E E
Sbjct: 184 LRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME------E 237
Query: 174 VKTLLGAEEEEEAGKFAEH 192
V L A E++G+ + H
Sbjct: 238 VTGRLKA--AEDSGQSSSH 254
>gi|27476076|gb|AAO17007.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1002
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 41/183 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+++M ++ + W V G YDE D L L V
Sbjct: 176 NYVEWAVVMRVRLQVQHMWEAVRYGNVDYDE---------------DRWALDALIV---- 216
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV- 133
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE+ +
Sbjct: 217 --AVPPVMQFSLSQKRTAKEAWDAIVAARIGSDRARKSTLQALRKEWENLAFKPGEDKMV 274
Query: 134 ----------KIVEKILRTLTEKFNDIVCSIEESKDIDSLS-EEAE-----VKEDEVKTL 177
+ VEK+ + EK+ I SIE D+ ++S EEA+ V DE + L
Sbjct: 275 QYDDDTYDEERAVEKLFCCIPEKYRQIARSIESLLDLSTMSIEEAKGRIKVVDGDEPQLL 334
Query: 178 LGA 180
G+
Sbjct: 335 SGS 337
>gi|297611403|ref|NP_001067439.2| Os11g0199800 [Oryza sativa Japonica Group]
gi|255679875|dbj|BAF27802.2| Os11g0199800 [Oryza sativa Japonica Group]
Length = 872
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 63/224 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 185 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 223
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R KS LQALR+E+E L K GE
Sbjct: 224 IAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRAHKSTLQALRKEWENLAFKPGEDVDD 283
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK+ R + EK+ I SIE D+ ++S E +
Sbjct: 284 FALRLHTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYKQIARSIESLLDLSTMSIEEAL- 342
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSS 201
+K + G E + +G E W S RKG S
Sbjct: 343 -GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQSNGRKGES 385
>gi|39545654|emb|CAE03128.3| OJ000114_01.9 [Oryza sativa Japonica Group]
Length = 1601
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 63/225 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 185 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 223
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 224 IAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 283
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK+ R + EK+ I SIE D+ ++S E +
Sbjct: 284 FALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEAL- 342
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
+K + G E +G E W S RKG S+
Sbjct: 343 -GRLKVVDGDEPRPLSGPITIGGKLHLTREQWEASQGDRRKGESS 386
>gi|147834139|emb|CAN68769.1| hypothetical protein VITISV_024757 [Vitis vinifera]
Length = 446
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 32/193 (16%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSK--EYWGLVETGYDEPAS--GSVLMDAHQKMT 60
+FS P F G Y +W M F++S + W ++E G P+ V+ +
Sbjct: 12 SFSTTRPPIFTGTDYPYWKTKMTWFIQSTSLDLWDVIEDGPHIPSKLENGVMALKLKHEW 71
Query: 61 DELKLKDLKVKN----YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
DEL K +++ L AIDR + I +AKEIW ++ +EGN +VK+S++
Sbjct: 72 DELDRKKIQLNAKAVFILHCAIDRNEFNRIWHCKSAKEIWKLLEVTYEGNDQVKESKINI 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L ++E +K E V++ V KILR+L K+ V +
Sbjct: 132 LVHDYELFSIKDFESIVEMFSRFLVIVNELEALGKTYTEVEKVMKILRSLPRKWETKVTA 191
Query: 154 IEESKDIDSLSEE 166
I+E+KD+ LS E
Sbjct: 192 IQEAKDLTKLSLE 204
>gi|21742944|emb|CAD39834.1| OSJNBa0079F16.1 [Oryza sativa Japonica Group]
gi|32489912|emb|CAE05105.1| OSJNBa0009K15.25 [Oryza sativa Japonica Group]
Length = 1592
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 54/195 (27%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+++M ++ + W V G YDE D + + L
Sbjct: 264 NYIEWAVVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 302
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
+ + ++ +K TAKE WDA+ G R +KS LQALR+E+E L K GE
Sbjct: 303 IATVPPEMQFSLSQKRTAKEAWDAIAAARIGRDRARKSTLQALRKEWENLAFKPGEDVDD 362
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS-EEA-- 167
++ + VEK+ R + EK+ I SIE D+ ++S EEA
Sbjct: 363 FALRLNTLLQKMVQYGDDTYDEERAVEKLFRYVPEKYRQIARSIESLLDLSTMSIEEALG 422
Query: 168 ---EVKEDEVKTLLG 179
V DE + LLG
Sbjct: 423 RLKVVDGDEPQPLLG 437
>gi|29150404|gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1339
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 23/107 (21%)
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------- 130
+ KK +AKE+WD +K +F G RV+ ++LQ L+ EF + M++GE
Sbjct: 33 VAKKRSAKEVWDCLKTRFIGADRVRDARLQTLKEEFTNMVMEAGETLDQYAGRITTMGVR 92
Query: 131 --------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
D +V+++ T+ EKF +V IE+ D+D++ E V
Sbjct: 93 YSALGATLNDAAMVKRLFDTVPEKFISLVAGIEQFYDVDTMPFEEAV 139
>gi|297610524|ref|NP_001064658.2| Os10g0429700 [Oryza sativa Japonica Group]
gi|255679425|dbj|BAF26572.2| Os10g0429700, partial [Oryza sativa Japonica Group]
Length = 880
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 41/173 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET-GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM ++++ W +E G D P +D + +
Sbjct: 53 NYNDWALLMKIKLQARCLWAAIEPDGVDVPLH-----------------EDRMALDAICS 95
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + E ED
Sbjct: 96 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRSEYESLAFRGDETVEDFA 155
Query: 134 --------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
K+VEK LR +FN ++ SIE DI +LS E
Sbjct: 156 LRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 208
>gi|110289120|gb|AAP53887.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 41/173 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET-GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM ++++ W +E G D P +D + +
Sbjct: 249 NYNDWALLMKIKLQARCLWAAIEPDGVDVPLH-----------------EDRMALDAICS 291
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + E ED
Sbjct: 292 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRSEYESLAFRGDETVEDFA 351
Query: 134 --------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
K+VEK LR +FN ++ SIE DI +LS E
Sbjct: 352 LRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 404
>gi|147857518|emb|CAN83910.1| hypothetical protein VITISV_000580 [Vitis vinifera]
Length = 565
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 31/179 (17%)
Query: 19 YDHWSMLMDNFMRS--KEYWGLVETGYDEPAS--GSVLMDAHQKMTDELKLKDLKVKN-- 72
Y +W M F++S + W ++E G P+ V++ + DEL K +++
Sbjct: 26 YPYWKTKMTCFLQSINLDLWDVIEDGPHIPSKLENGVMVPKPKHEWDELDRKKVQLNAKA 85
Query: 73 --YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
L AIDR + I + AKEIW ++ +EGN +VK+S++ L ++E + +K E
Sbjct: 86 VFILHCAIDRNEFNRIWQCKLAKEIWRLLEITYEGNNQVKESRINILVHDYELVSIKDFE 145
Query: 131 EDVKI-----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V++ V KILR+L +K V +I+E+KD+ LS E
Sbjct: 146 SIVEMFSRFMVIVNELEALGKTYTEVEKVMKILRSLPKKRETKVTAIQEAKDLTKLSLE 204
>gi|224142974|ref|XP_002324802.1| predicted protein [Populus trichocarpa]
gi|222866236|gb|EEF03367.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 37/190 (19%)
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
E K+K+ K + + A+ + IR K TAK WD + ++F G+ +V+ +LQA+ F
Sbjct: 40 ENKIKNAKALSLIQGALTDELFPRIRNKKTAKGAWDILSREFRGDKKVRAVKLQAVTANF 99
Query: 122 ETLEMKSGE--------------------EDV---KIVEKILRTLTEKFNDIVCSIEESK 158
E + M GE EDV +IV+K+L +L+ ++ IV I+E++
Sbjct: 100 EYMRMSDGERLDGYRVKFFAIVNNLKSLGEDVSETRIVQKLLMSLSRRYKSIVSIIKETR 159
Query: 159 DIDSLSEE---AEVK--------EDEVKTLLGAEE--EEEAGKFAEHWTTS-RKGSSNCH 204
D+D L E A VK DE L G E+ A +F + + S N
Sbjct: 160 DLDVLRVEKVIASVKVYDKREDLHDERDKLTGTEKAFSNVATQFLTYVLIKFQNKSKNNK 219
Query: 205 STWKAQDVSF 214
T K Q + F
Sbjct: 220 KTLKIQKIHF 229
>gi|224165231|ref|XP_002338789.1| predicted protein [Populus trichocarpa]
gi|222873464|gb|EEF10595.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 36/172 (20%)
Query: 26 MDNFMRSKEYWGLVETGYD-----EPASGSVLMDAHQK--------MTDELKLKDLKVKN 72
M+ + + + W ++E G E A+GS ++ K + E K+K+ K +
Sbjct: 1 METILIAFDLWDVIEVGIQSHQSPEVANGSGDEESEAKQTTLRTSTTSREDKIKNAKALS 60
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM------ 126
+ A+ + IR + TAK WD + ++F G+ +V+ +LQA+R +FE L M
Sbjct: 61 LIQGALIDNLFPRIRNEKTAKGAWDILSREFRGDKKVRAVKLQAVRADFEYLRMLESESL 120
Query: 127 --------------KSGEEDV---KIVEKILRTLTEKFNDIVCSIEESKDID 161
KS EDV +IV+K+L +L+ ++ IV I+E++D+D
Sbjct: 121 DGYLAKFFATVNNLKSLREDVSENRIVQKLLMSLSRRYKSIVSIIKETRDLD 172
>gi|224165302|ref|XP_002338798.1| predicted protein [Populus trichocarpa]
gi|222873477|gb|EEF10608.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 41/170 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ M +RS W ++E G D TD+ K + V + QA
Sbjct: 32 NYGIWAVKMKIILRSLGVWSVIE-GAD---------------TDDDKDQGAMVA--ISQA 73
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ ++ I +K TAKE WDA+++ G RVKK+++Q L+R+ + M+ E
Sbjct: 74 VPDDVMMAIAEKQTAKEAWDALREMRIGEDRVKKARVQVLKRQLYKVHMQDSETVNEYSM 133
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
E+ ++VEK+ ++ ++F I+ +IE+ D+D++S
Sbjct: 134 KLTALVGEIRSLGAKLEESEVVEKLFSSVPDRFLQIIGTIEQFGDVDTMS 183
>gi|147811800|emb|CAN74868.1| hypothetical protein VITISV_002411 [Vitis vinifera]
Length = 538
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 32/193 (16%)
Query: 6 NFSQPAIPRFVGH-YDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMT 60
NFS+ P F G Y +W M F++S + W ++E G P L+ +K
Sbjct: 12 NFSKHRAPFFTGTDYPYWKARMTWFLQSTDLDVWDVIEDGPTFPTKLVDGFLVPKPKKEW 71
Query: 61 DELKLKDLKVKN---YLFQ-AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL ++ ++ + Q A+DR + I + +AKEIW ++ EG +VK+S++
Sbjct: 72 NELDRRNFQLNAKAVFTLQCAMDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINI 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L +E MK E V++ V KILR+L K++ V +
Sbjct: 132 LVHNYELFSMKETETIVEMITRFTEIVNGLESLGRVINESEKVMKILRSLPSKWHTKVTA 191
Query: 154 IEESKDIDSLSEE 166
I+E+KD+ L E
Sbjct: 192 IQEAKDLTKLPME 204
>gi|224140897|ref|XP_002323814.1| predicted protein [Populus trichocarpa]
gi|224140899|ref|XP_002323815.1| predicted protein [Populus trichocarpa]
gi|222866816|gb|EEF03947.1| predicted protein [Populus trichocarpa]
gi|222866817|gb|EEF03948.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY---DEPASGSVLMDAHQKMTDELKLKDL 68
P F G +Y+ W + M + + + W VE Y D PA+ ++ A K+ E K +
Sbjct: 13 PVFNGDNYETWVIRMTIHLEALDLWEAVEENYVVPDLPANPTI---AQPKIHKEKKTRKS 69
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
K K L+ + TI I +AK IWD +K++++ N R K Q L REFE +MK
Sbjct: 70 KAKACLYTVVSNTIFIRIMNLKSAKGIWDYLKEEYQDNERTKNMQALNLIREFEMQKMKE 129
Query: 129 GEEDVKIVEKILRTL 143
E +K+L +
Sbjct: 130 TENIKDYADKLLSII 144
>gi|32487722|emb|CAE05399.1| OSJNBa0022F16.23 [Oryza sativa Japonica Group]
Length = 1628
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS+LM ++ + W V+TG + ++A + +
Sbjct: 57 NYSDWSLLMRAMLQVRGLWEAVDTGDVNFQEDRMALEA------------------VLKV 98
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ +L + K+TAK+ WDA+K G RV+KS+ Q LR++F +E K GE VE
Sbjct: 99 VPADLLPVLSVKETAKDAWDAIKTMRVGVDRVRKSKAQELRKQFNAIEFKEGES----VE 154
Query: 138 KILRTLTEKFNDIVC---SIEESKDIDSLSEEAEVKEDEVKT-----LLGAEEEEEAGKF 189
+ L+ N++ +EESK + AE + + K+ L EE+ A +
Sbjct: 155 EFSVRLSGLVNNLAVLGIQLEESKKLTGRLRNAEERRPKKKSGDEGDKLYITEEQWAARA 214
Query: 190 AEHWT---TSRKGSSN 202
E + +SRK + N
Sbjct: 215 KERQSGEGSSRKKAGN 230
>gi|62734628|gb|AAX96737.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1523
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 63/224 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 185 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 223
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R KS LQALR+E+E L K GE
Sbjct: 224 IAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRAHKSTLQALRKEWENLAFKPGEDVDD 283
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK+ R + EK+ I SIE D+ ++S E +
Sbjct: 284 FALRLHTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYKQIARSIESLLDLSTMSIEEAL- 342
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSS 201
+K + G E + +G E W S RKG S
Sbjct: 343 -GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQSNGRKGES 385
>gi|253761656|ref|XP_002489203.1| hypothetical protein SORBIDRAFT_0012s004320 [Sorghum bicolor]
gi|241947063|gb|EES20208.1| hypothetical protein SORBIDRAFT_0012s004320 [Sorghum bicolor]
Length = 579
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 48/198 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS M M++++ W VE G P D + + +
Sbjct: 114 NYYEWSQTMKLRMQARDLWEDVEGG---PVQ---------------YRDDRRALEVIVAS 155
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ + + + K TAKE WDA+ G RV+++ LQ LRRE+E +++K GE
Sbjct: 156 VPKELGLPLLDKATAKEAWDAIAVTRIGVDRVRRATLQRLRREWENVDVKPGEPVEDFAL 215
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
++ ++VEK LRT+ K+ IV +IE+ D +LS E E
Sbjct: 216 RLSTLHQQLVLHGDRDIDEKRVVEKFLRTVPAKYAQIVVAIEQFLDFKALSLE------E 269
Query: 174 VKTLLGAEEEEEAGKFAE 191
V L A +E EA E
Sbjct: 270 VTGRLKAVDEREAQAVTE 287
>gi|147789996|emb|CAN62929.1| hypothetical protein VITISV_041092 [Vitis vinifera]
Length = 1014
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 4 EGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
E +F+ A P F G +Y W++ M +++ + W +E Y+ G+ A K E
Sbjct: 3 EASFT-AAPPIFNGENYQTWAIRMTVHLQALDVWEAIEEDYEISPLGANPTVAQMKNHKE 61
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
K + K K LF A+ IL I + ++A EIW+ ++++++GN RV+ Q+ L +EFE
Sbjct: 62 KKTRKAKAKACLFSAVSPLILTKIVQLESAAEIWNHLREEYQGNERVRNMQVMNLIQEFE 121
Query: 123 TLEMKSGEEDVKIVEKILRTLTEKFN--DIVCS 153
+ +K + E++L T+T K D+ C+
Sbjct: 122 IVRIKESQTIKDYAEQLL-TITNKVRLLDVKCN 153
>gi|77552469|gb|ABA95266.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1388
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 63/225 (28%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 185 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 223
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 224 IVAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 283
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
++ + VEK+ R + EK+ I SIE D+ ++S E +
Sbjct: 284 FALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRRIARSIESLLDLSTMSIEEAL- 342
Query: 171 EDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
+K + G E + +G E W S RKG S+
Sbjct: 343 -GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDGRKGESS 386
>gi|51038080|gb|AAT93883.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1248
Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 39/155 (25%)
Query: 85 TIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------- 130
++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 4 SLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDDFALRLNTLLQ 63
Query: 131 ----------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGA 180
++ + VEK+ R + EK+ I SIE D+ ++S E + +K + G
Sbjct: 64 KIVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEAL--GRLKVVDGD 121
Query: 181 EEEEEAGKFA---------EHWTTS----RKGSSN 202
E + +G E W S RKG S+
Sbjct: 122 EPQPLSGSITIGGKLHLTREQWEASQGDGRKGESS 156
>gi|224099427|ref|XP_002334482.1| predicted protein [Populus trichocarpa]
gi|222872653|gb|EEF09784.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 36/177 (20%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD-------------ELKLKDLKVKN 72
M+ + + + W ++E G S V + + + ++ E K+K+ K +
Sbjct: 1 METILVAFDLWDIIEVGIQSHQSPEVAIGSDDEESEAEQTTLQTSTTSRENKIKNAKALS 60
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM------ 126
+ A+ + IR K TAK WD + ++F G+ +V+ +LQA+R +FE L M
Sbjct: 61 LIQGALTDDLFSRIRNKKTAKGAWDILSREFRGDKKVRAVKLQAVRADFEYLRMSESESL 120
Query: 127 --------------KSGEEDV---KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
KS EDV +IV+K+L + + ++ IV IEE++D+ L E
Sbjct: 121 DVYLAKFFATVNNLKSLGEDVLENRIVQKLLMSPSRRYKSIVSIIEETRDLKVLRVE 177
>gi|297609630|ref|NP_001063453.2| Os09g0473900 [Oryza sativa Japonica Group]
gi|255678974|dbj|BAF25367.2| Os09g0473900 [Oryza sativa Japonica Group]
Length = 651
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 54/196 (27%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 315 NYIEWAAVMRVRLQVRHMWEAVRYGDVDYDE---------------------DRRALDAL 353
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WD + G+ R +KS LQALR+E+E L K GE
Sbjct: 354 IAAVPPEMQFSLSQKRTAKEAWDTIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 413
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS-EEA-- 167
++ + VEK+ R + EK+ I SIE D+ ++S EEA
Sbjct: 414 FALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEALG 473
Query: 168 ---EVKEDEVKTLLGA 180
V DE + L G
Sbjct: 474 RLKVVDGDEPQPLSGP 489
>gi|253759675|ref|XP_002488942.1| hypothetical protein SORBIDRAFT_1475s002010 [Sorghum bicolor]
gi|241947152|gb|EES20297.1| hypothetical protein SORBIDRAFT_1475s002010 [Sorghum bicolor]
Length = 447
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 38/230 (16%)
Query: 13 PRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKN 72
P +Y WS+ + M + W ++E SGS E K KD K K
Sbjct: 22 PLTANNYISWSIRVRAIMEDQGVWDVME------PSGSTSAPT-AAEAAEAKKKDTKAKA 74
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-- 130
+L Q + +L + K T KE+WDA+K + G RVK+++LQ L+ EF+ + MK E
Sbjct: 75 HLLQCLPDDLLMQVAGKKTGKEVWDALKARHVGADRVKEARLQTLKSEFDAMRMKDEESL 134
Query: 131 ---------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE--- 166
ED +V+K+ T+ ++ ++ IE+ D+ ++ E
Sbjct: 135 DQYVGRLTGMSVRYGNLGGSLEDAALVKKLFDTVPGRYIHVIAGIEQFYDLQTMKFEDAV 194
Query: 167 AEVKEDEVKTLLG-AEEEEEAGKF----AEHWTTSRKGSSNCHSTWKAQD 211
+K E +T G E EAG+ AE RK + + ++QD
Sbjct: 195 GRLKAYEERTRRGVGEGRSEAGQVLLTQAEWEARQRKSTGDGSGGSRSQD 244
>gi|27476074|gb|AAO17005.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 2071
Score = 59.7 bits (143), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 39/151 (25%)
Query: 89 KDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------------ 130
K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 164 KRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDDFALRLNTLLQKMVQ 223
Query: 131 ------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEE 184
++ + VEK+ R + EK+ I SIE D+ ++S E + +K + G E +
Sbjct: 224 YGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEAL--GRLKVVDGDEPQP 281
Query: 185 EAGKFA---------EHWTTS----RKGSSN 202
+G E W S RKG S+
Sbjct: 282 LSGPITIGGKLHLTREQWEASQGDGRKGESS 312
>gi|110289021|gb|ABB47448.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 886
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 23/116 (19%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+ QA+ R +L + K DTAK WDA+K G RV +++ Q RR+FE + K GE
Sbjct: 58 ILQAVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVSEAREQGFRRQFEAMRFKDGETPE 117
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
ED I +K+LR + +K+ + S+E+ D+ +++ E
Sbjct: 118 EFAMRLTAIVADMRNMGGVMEDEHINKKLLRVVPKKYKPVAISLEQLLDVKTMALE 173
>gi|39546256|emb|CAD39831.3| OSJNBa0079F16.4 [Oryza sativa Japonica Group]
Length = 1708
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 39/174 (22%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+D + + L A+ + ++ K TAKE WDA+ G+ R +KS LQALR+E+E L
Sbjct: 387 EDRRALDALIAAVPLEMQFSLSHKWTAKEAWDAIAVARIGSDRARKSTLQALRKEWENLA 446
Query: 126 MKSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
K GE ++ + VEK+ R + EK+ I SIE D+
Sbjct: 447 FKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLS 506
Query: 162 SLSEEAEVKEDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
++S E + +K + G E + +G E W S RKG S+
Sbjct: 507 TMSIEEAL--GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDGRKGESS 558
>gi|147778576|emb|CAN77983.1| hypothetical protein VITISV_000988 [Vitis vinifera]
Length = 887
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 23/130 (17%)
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
K+ +E + + K K LF + TI I T EIW+ +KK++E N RVK Q+ L
Sbjct: 21 KLHNERRQRKSKAKASLFAIVSSTIFTRIMTLKTTNEIWNFLKKEYEVNERVKGMQVLNL 80
Query: 118 RREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSI 154
REFE MK E +IV+KI T+ EKF + S+
Sbjct: 81 IREFEMQMMKELETIKDYSDRLLSIVNKVRLLGTNFSYSRIVQKIFITVPEKFETTISSL 140
Query: 155 EESKDIDSLS 164
E SK++ S++
Sbjct: 141 ENSKNVSSIT 150
>gi|224160640|ref|XP_002338235.1| predicted protein [Populus trichocarpa]
gi|222871390|gb|EEF08521.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M+ ++++ + W +VE+ G+ A K +E K K K + L A+ I
Sbjct: 1 METYLKALDLWEIVESDRQPTPLGNNPTIAQMKFFNEEKAKRFKALSCLHNAVSEDIFTR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I +AKE WD +K +F G+ + ++ Q+ LRR+FE L+MK E
Sbjct: 61 IMTCKSAKETWDKLKAEFHGDEKSRRMQILNLRRQFEGLKMKENE 105
>gi|77553280|gb|ABA96076.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1351
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 30/144 (20%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+D + + L AI + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L
Sbjct: 23 EDRRALDALIAAIPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLA 82
Query: 126 MKSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
K GE ++ + VEK+ R + EK+ I SIE D+
Sbjct: 83 FKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLS 142
Query: 162 SLS-EEA-----EVKEDEVKTLLG 179
+++ EEA V DE + L G
Sbjct: 143 TMTIEEALGRLKVVDSDEPQPLSG 166
>gi|147783333|emb|CAN77489.1| hypothetical protein VITISV_027476 [Vitis vinifera]
Length = 515
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 4 EGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
E +F+ A P F G +Y W++ M +++ + W +E Y+ G+ A K E
Sbjct: 3 EASFTA-APPVFNGENYQTWAVRMTVHLQALDVWEAIEEDYEISPLGANPTVAQMKNHKE 61
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARV----KKSQ-LQAL 117
K + K K LF A+ IL I + ++A EIW ++++++GN RV K+SQ ++
Sbjct: 62 KKTRKAKAKACLFSAVSPLILTRIMQLESAAEIWKHLREEYQGNERVRNMMKESQTIKDY 121
Query: 118 RREFETLEMKS---GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+ T+ K G+E D ++V K TL EK+ + S+E +KD+ S++
Sbjct: 122 AEQLLTIANKVRLLGKEFSDERVVPKKFVTLPEKYEATISSLENTKDLSSIT 173
>gi|77552313|gb|ABA95110.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1146
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 39/172 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ WS+LM ++++ WG V+ G +G ++ H+ D + L + + A
Sbjct: 482 NYNEWSLLMKIKLQARFLWGTVDPG----GAG---IELHE---DRMAL------DAICSA 525
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ ++ + K TAK W ++ GN R++K+ Q LR E+E L + GE
Sbjct: 526 VPAEMISMLATKVTAKTAWKCIRTLRVGNDRIRKASTQKLRSEYEALAFRDGESVQDFAM 585
Query: 132 -----------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D K+V+K LR +F+ ++ SIE DI +LS E
Sbjct: 586 RLNTIVTQLVTLGDPEPDDKVVKKYLRVTRPRFSQLILSIETLLDISTLSLE 637
>gi|6598588|gb|AAF18643.1|AC006228_14 F5J5.14 [Arabidopsis thaliana]
Length = 743
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 45/199 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ M + W +E G D+ K+ + +FQ+
Sbjct: 26 NYTVWAIRMQIARSVNKMWETIEPGIDD------------------GYKNTMARGLIFQS 67
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
I ++ + TAK +WD++K ++ G RVK+++LQ L EFE ++MK E
Sbjct: 68 IPESLTLQVGTLATAKLVWDSIKTRYVGADRVKEARLQTLMAEFEKMKMKESEKIDVFAG 127
Query: 131 ----------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDIDSLSEE---AEVK 170
E K+V+K L L K+ I+ S+E+ D+++ S E +K
Sbjct: 128 RLAELATRSDALGSNIETSKLVKKFLNALPLRKYIHIIASLEQVLDLNNTSFEDIVGRIK 187
Query: 171 EDEVKTLLGAEEEEEAGKF 189
E + G E+E++ GK
Sbjct: 188 VYEERVWDGEEQEDDQGKL 206
>gi|297728949|ref|NP_001176838.1| Os12g0212266 [Oryza sativa Japonica Group]
gi|255670145|dbj|BAH95566.1| Os12g0212266 [Oryza sativa Japonica Group]
Length = 962
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 39/173 (22%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D + + L A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L
Sbjct: 15 DRRALDALIAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAF 74
Query: 127 KSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDS 162
K GE ++ + VEK+ R + EK+ I SIE D+ +
Sbjct: 75 KPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLST 134
Query: 163 LSEEAEVKEDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
+S E + +K + G E + +G E W S RKG S+
Sbjct: 135 MSIEEAL--GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDRRKGESS 185
>gi|224159031|ref|XP_002338038.1| predicted protein [Populus trichocarpa]
gi|222870393|gb|EEF07524.1| predicted protein [Populus trichocarpa]
Length = 106
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 1 MTSEGNFSQPAIPRFV-GHYDHWSMLMDNFMRSKEYWGLVETGYDEPASG---SVLMDAH 56
MT+E +Q IP+ +YD W + + F+ S+E +V GYDEP S L +A
Sbjct: 1 MTTES--TQTLIPKLTKDNYDSWCIRLKAFLGSQECLEIVHYGYDEPESKEEEDALQEAQ 58
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKF 103
++ + KD K K ++Q +D + I +T+ +IW+A+++K+
Sbjct: 59 KQALKVNRKKDNKAKTIIYQGLDEDTFEIIASAETSHDIWEALQQKY 105
>gi|147790136|emb|CAN67887.1| hypothetical protein VITISV_042575 [Vitis vinifera]
Length = 208
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 27/29 (93%)
Query: 6 NFSQPAIPRFVGHYDHWSMLMDNFMRSKE 34
NF+QP +PRF G+YDHW+MLM+NF+RSKE
Sbjct: 5 NFAQPTVPRFDGYYDHWAMLMENFLRSKE 33
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 25/90 (27%)
Query: 85 TIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------- 130
T+ + D + W + + F + V ++QLQALR+EFE L+MK GE
Sbjct: 10 TVPRFDGYYDHWAMLMENFLRSKEVNRAQLQALRKEFEILQMKEGEKVDEYFTKALTIAN 69
Query: 131 ----------EDVKIVEKILRTLTEKFNDI 150
++V IVEKILR++T K + +
Sbjct: 70 KMKTHEERMGQNV-IVEKILRSMTPKLDYV 98
>gi|357151011|ref|XP_003575653.1| PREDICTED: uncharacterized protein LOC100835442 [Brachypodium
distachyon]
Length = 382
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 24/130 (18%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET---GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+M M M+S W V + GY++ D +
Sbjct: 259 NYTLWAMQMRVAMQSAGVWDAVSSELVGYED---------------------DRDALLAI 297
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVK 134
+Q + +L + +KDTAK W+A+K G+ RV++S LQALR+EF+ LEM E
Sbjct: 298 YQGVPEDMLPALARKDTAKLAWEAIKTMHVGHDRVRESNLQALRKEFQVLEMGENEATEA 357
Query: 135 IVEKILRTLT 144
++ + ++
Sbjct: 358 FATRVTKLVS 367
>gi|125547102|gb|EAY92924.1| hypothetical protein OsI_14726 [Oryza sativa Indica Group]
Length = 133
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ M FMR++ W VE DA + D++ L + QA
Sbjct: 41 NYGVWAVKMKIFMRAQGVWAAVEG------------DAADEKIDQMALA------AIVQA 82
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+ ++ I +K+TAKE WDA+K+ G RVKK+++Q L+RE +
Sbjct: 83 VPEAVVMAISEKETAKEAWDALKQMNMGEERVKKARVQTLKRELD 127
>gi|147800844|emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]
Length = 1220
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M+ N S IP F G HY W++ M ++RS+ W +V + D P G+ A K
Sbjct: 1 MSPSSNTSS-VIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEDDPPPLGANPTVAQMKA 59
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI-WDAMKKKFEGNARVKKSQLQALR 118
+E KLK K L + I I +T K+ ++ MK K + + + +L +
Sbjct: 60 YEEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQREFELMKMKDDESVKDYSGRLMDVV 119
Query: 119 REFETLEMKSGEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS---EEAEVKEDE 173
+ L GE D K+VEKI+ ++ +KF + +IEES D+ +L+ +++ E
Sbjct: 120 NQMRLL----GEAFTDQKVVEKIMVSVPQKFEAKISAIEESCDLQTLTIVELTSKLHAQE 175
Query: 174 VKTLLGAEEEEEAGKFAEH 192
+ L+ ++ E A H
Sbjct: 176 QRVLMRGDKATEGAFQANH 194
>gi|77556357|gb|ABA99153.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1515
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 39/174 (22%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+D + + L A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L
Sbjct: 177 EDRRALDALIAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLA 236
Query: 126 MKSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
K GE ++ + VEK+ R + EK+ I SIE ++
Sbjct: 237 FKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLNLS 296
Query: 162 SLSEEAEVKEDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
++S E + +K + G E + +G E W S RKG S+
Sbjct: 297 TMSIEEAL--GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDGRKGESS 348
>gi|147799348|emb|CAN74718.1| hypothetical protein VITISV_006955 [Vitis vinifera]
Length = 855
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMT 60
N S+ P F G Y +W M +++S + W ++E G + P VL+ ++
Sbjct: 12 NVSKHRAPFFTGTDYPYWKTRMTWYLQSTDLDVWDVIEDGPNFPTKLVDGVLVPKPKQEW 71
Query: 61 DELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL ++ KV L A+DR + I + +AKEIW ++ EG +VK+S++
Sbjct: 72 NELDRRNFQLNAKVVFTLQCAMDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINL 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L +E MK E V++ V KILR+L K++ V +
Sbjct: 132 LVHNYELFSMKEXETIVEMITGFTDIVNGLEALGKTYKESEKVMKILRSLPSKWHTKVTA 191
Query: 154 IEESKDIDSLSEEAEV 169
I+E+KD+ L E +
Sbjct: 192 IQEAKDLTKLPMEEXI 207
>gi|284434727|gb|ADB85424.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1946
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 39/203 (19%)
Query: 14 RFVGHYDHWSMLMDNFMRSKEYW-GLVETGYDEPASGSVLMDAHQKMTDELKLKDL---- 68
R+ GH+++ +++ D + W L +T Y E A+ + + M D ++ D+
Sbjct: 514 RYRGHHEYQAVVRD--VGPGGGWPTLTKTNYVEWAAVMRVKLQVRHMWDAVRYGDVDYDQ 571
Query: 69 --KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
+ + L A+ + ++ K TAKE WDA+ G+ R +KS LQALR+E+E L
Sbjct: 572 DRRALDALIAAVPPEMQFSLTNKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAF 631
Query: 127 KSGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDS 162
K GE+ + + VEK+ R + EK+ + SIE D+ +
Sbjct: 632 KPGEDVDDFALRLNTLLQKLVQFGDDTYGEERAVEKLFRCVPEKYKQMARSIESLLDLST 691
Query: 163 LS-EEA-----EVKEDEVKTLLG 179
++ EEA V DE + L G
Sbjct: 692 MTIEEALGRLKVVDSDEPQRLSG 714
>gi|224150413|ref|XP_002336952.1| predicted protein [Populus trichocarpa]
gi|222837210|gb|EEE75589.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGY-----DEPASGS---------VLMDAHQ 57
P+F G +YD W++ M+ + + + W +VE G E A GS +++ A
Sbjct: 14 PQFNGTNYDFWAVKMEIVLIALDLWEVVEDGIKSHQAPEIAGGSGDEESEADQIILHAST 73
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+E K+K+ K + + A+ + IR + TAK WD + ++F G+ +V+ +LQ +
Sbjct: 74 TSREE-KIKNAKALSLIQGALTDDLFPRIRNEKTAKGAWDILSREFRGDKKVRAVKLQGV 132
Query: 118 RREFETLEMKSGEEDVKIVEKILRTL 143
R +FE L M E + K T+
Sbjct: 133 RADFEYLRMTESESLDGYLAKFFATI 158
>gi|224115936|ref|XP_002317165.1| predicted protein [Populus trichocarpa]
gi|222860230|gb|EEE97777.1| predicted protein [Populus trichocarpa]
Length = 802
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M RS+ W +V+ GY+EP + S L +A +K + K KD + Q++ TI
Sbjct: 1 MKTLFRSQNLWDIVKNGYEEPENISTLEEAQRKELEVKKQKDASALYLIQQSLADTIFPR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTE 145
I + TAK+ WD ++ +F G++++ E E LE G + ++ E
Sbjct: 61 ITEASTAKQAWDILQNEFLGDSKIAP--------EIE-LEAPYGAAMNGYWQSMIDFYRE 111
Query: 146 KFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEE 185
F I C + SKD KE +K LL +E E
Sbjct: 112 HFEKIGCPVTPSKDTGLHLAVHSKKEQPLKALLEIMKERE 151
>gi|224151274|ref|XP_002337081.1| predicted protein [Populus trichocarpa]
gi|222837980|gb|EEE76345.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
Query: 83 LDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------ 130
L+ I T+KEIW+ +K +++GN R+K Q+ L REFE +MK E
Sbjct: 36 LNRIMTLKTSKEIWNFLKGEYKGNERIKGMQVLNLIREFELQKMKESETIKEYSNKLLSI 95
Query: 131 -----------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+ +IV+KIL T+ EKF + S+E SKD+ S++
Sbjct: 96 VNNIKLLGTDFSNSRIVQKILVTILEKFETTISSLENSKDLSSIT 140
>gi|147815592|emb|CAN65974.1| hypothetical protein VITISV_019888 [Vitis vinifera]
Length = 243
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSK--EYWGLVETGYDEPAS--GSVLMDAHQKMT 60
+FS F G Y +W M F+ S + W ++E G P+ V++ +
Sbjct: 12 SFSTTRPXLFTGTBYPYWKTKMTWFIXSTSLDLWDVIEDGPHIPSKLEXGVMVPKLKHEW 71
Query: 61 DELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
DEL K + KV L AIDR + I +AKEIW ++ +EGN +VK+S++
Sbjct: 72 DELDRKKVQLNAKVIFILHCAIDRNEFNRIWHCKSAKEIWKLLEVTYEGNDQVKESKINI 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L ++E +K E V++ V KILR+L K+ V +
Sbjct: 132 LMHDYELFSIKXFESIVEMFSRFLVIXNELEALGKTYTEVEKVMKILRSLPXKWETKVTA 191
Query: 154 IEESKDIDSLSEEAEVK 170
I+E D+ LS E ++
Sbjct: 192 IQEXNDLTKLSLEELIR 208
>gi|38346593|emb|CAE04657.2| OSJNBa0061G20.13 [Oryza sativa Japonica Group]
Length = 1122
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 41/172 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W ++ Y E +D + + QA
Sbjct: 62 NYPDWALLMRVNLQAQGLWMAIDPSYAE------------------FREDRAALSAILQA 103
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ R L + K DTAK WDA K G RV++++ Q RR+FE++ GE
Sbjct: 104 VPRETLRGLAKHDTAKAAWDATKTMRVGVDRVREAKEQGFRRQFESMRFNEGETPEEFAM 163
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
ED +K+LR + +K+ + S+E+ D+ +++ E
Sbjct: 164 RLTAVVADIRDMGGVMEDEHGNKKLLRVVPKKYKPVAISLEQLLDVKTMALE 215
>gi|116634828|emb|CAH66352.1| OSIGBa0135C09.3 [Oryza sativa Indica Group]
Length = 1366
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 44/184 (23%)
Query: 30 MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKK 89
M+++ WG VE G L+D Q D + + +A+ +L T+ K
Sbjct: 1 MQAQGLWGAVE------PEGDDLVDYRQ---------DRQALAAILRAVPAEMLATLAVK 45
Query: 90 DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------------- 130
+TA+E W+A+K + G RV+++ Q LRREF + K GE
Sbjct: 46 ETAQEAWEAIKTRRIGVQRVREANAQQLRREFGDILFKDGETVDHFSMRIGGLANNLRIL 105
Query: 131 ----EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEEA 186
+ ++V+K+L+ + E I SIE D++ LS E EV L + E+ +
Sbjct: 106 GDNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNELSLE------EVTGCLRSVEQRKQ 159
Query: 187 GKFA 190
K A
Sbjct: 160 HKTA 163
>gi|116309640|emb|CAH66692.1| OSIGBa0097A15.7 [Oryza sativa Indica Group]
Length = 1122
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 41/172 (23%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++LM ++++ W ++ Y E +D + + QA
Sbjct: 62 NYPDWALLMRVNLQAQGLWMAIDPSYAE------------------FREDRAALSAILQA 103
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ R L + K DTAK WDA K G RV++++ Q RR+FE++ GE
Sbjct: 104 VPRETLRGLAKHDTAKAAWDATKTMRVGVDRVREAKEQGFRRQFESMRFNEGETPEEFAM 163
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
ED +K+LR + +K+ + S+E+ D+ +++ E
Sbjct: 164 RLTAVVADIRDMGGVMEDEHGNKKLLRVVPKKYKPVAISLEQLLDVKTMALE 215
>gi|115469592|ref|NP_001058395.1| Os06g0684500 [Oryza sativa Japonica Group]
gi|113596435|dbj|BAF20309.1| Os06g0684500 [Oryza sativa Japonica Group]
gi|215704773|dbj|BAG94801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 288
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 50/210 (23%)
Query: 17 GHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y W+++M + + E W DA + +T KD + +
Sbjct: 31 ANYHQWALVMRVSLEALELW-----------------DAVEAVT-----KDRRALATILH 68
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------ 130
A+ + + K +AKE WD++KK G+ RVK + +Q +EFE + + GE
Sbjct: 69 AVPPKMKVGLAVKTSAKEAWDSVKKMRAGDDRVKSASVQRFMKEFENMMFRDGETVGDFA 128
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
ED +V+K+LR + ++ + +IE +D+D +S E V +
Sbjct: 129 MRINGPTASLRDLGEEIEDSHVVKKVLRVVPKRLKQVTVAIEMLEDMDDMSVEELVGRLQ 188
Query: 174 VKTLLGAEEEEE--AGKFA---EHWTTSRK 198
V E++ E G+ E W SR+
Sbjct: 189 VAVDADVEDQTEVHGGQLLLAEEQWEASRR 218
>gi|357521417|ref|XP_003630997.1| T-complex protein 1 subunit delta [Medicago truncatula]
gi|355525019|gb|AET05473.1| T-complex protein 1 subunit delta [Medicago truncatula]
Length = 608
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M ++R++ W +VE G + P + A + + K+ + + A+ I
Sbjct: 1 MKTYLRAQSLWDVVEKGNNPPPLPNNPTLAQIRNHSDEVAKEGRALAIIHAALHDDIFIK 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------- 130
I + AKE W+ + ++++G+ R KK ++ LRREFE L+MK E
Sbjct: 61 ILNLEIAKEAWNKLMEEYQGSERTKKMKVLNLRREFEALKMKETETVREFSDRISKVITQ 120
Query: 131 --------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEE 182
D ++VEKIL L E F + S+EE+K+ +E+ E+ L A E
Sbjct: 121 IRLLGEDLSDQRVVEKILVCLPEMFEAKISSLEENKNF------SEITVPELVNALQASE 174
Query: 183 EEEAGKFAEH----WTTSRKG 199
+ + + E+ + S KG
Sbjct: 175 QRRSLRMEENVEGAFLASNKG 195
>gi|147765525|emb|CAN75867.1| hypothetical protein VITISV_018217 [Vitis vinifera]
Length = 343
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 32/186 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPAS--GSVLMDAHQKMTDELKLKD 67
P F G Y +W M M F +S + W +E G P V++ + DEL K
Sbjct: 19 PLFTGTDYPYWKMKMTWFFQSINLDLWDAIEDGPHIPLKLENGVMVPKPKHEWDELDRKK 78
Query: 68 LKVKN----YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
+++ L AIDR + I + +AKEI ++ +EGN +VK+S++ L R++E
Sbjct: 79 VQLNAKAIFILHCAIDRNEFNHIWQCKSAKEICRLLENTYEGNNQVKESRINILVRDYEL 138
Query: 124 LEMKSGEEDVKI--------------------VE---KILRTLTEKFNDIVCSIEESKDI 160
+K E V++ VE KILR+L +K+ V +I+E+KD+
Sbjct: 139 FSIKDFESIVEMFYSFMVILNELEALGKTYTEVEKFMKILRSLPKKWETKVTAIQEAKDL 198
Query: 161 DSLSEE 166
LS E
Sbjct: 199 IKLSLE 204
>gi|224171345|ref|XP_002339483.1| predicted protein [Populus trichocarpa]
gi|222875219|gb|EEF12350.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M +E +FS + P G +Y W++ M+ ++ + + W VE Y+ P + K
Sbjct: 1 MDNEASFSHISSPISNGENYQLWAVRMETYLEALDIWEAVEEYYEIPPLPTNPTMTQIKS 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K K L A+ T+ I +AK++WD K+++ G+ R++ Q L
Sbjct: 61 HKERKTKKSKAKACLLAAVSTTVFTRIMSLKSAKDVWDYXKEEYAGDERIRGMQSLNLII 120
Query: 120 EFETLEMK 127
EFE MK
Sbjct: 121 EFELQRMK 128
>gi|147798116|emb|CAN71776.1| hypothetical protein VITISV_002511 [Vitis vinifera]
Length = 177
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 13 PRFVG-HYDHWSMLMDNF--MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK--- 66
P G +Y HW + M F M+S++ W VE G+ P ++D + T+ +K K
Sbjct: 14 PFLTGENYSHWKVRMQYFLKMQSEKVWNAVEFGWSPPK----VLDREGRPTNVIKPKLEW 69
Query: 67 ----------DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+ + +F AI I +AKE WD ++ EG VK S+LQ
Sbjct: 70 DRGDNEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAVKVSKLQM 129
Query: 117 LRREFETLEMKSGEEDVKIVEKILRTLTEKFN 148
L FET+ M+ E + K++ + FN
Sbjct: 130 LTSRFETIRMEDHENFGEFYAKLMDIVNSSFN 161
>gi|147807890|emb|CAN70948.1| hypothetical protein VITISV_018487 [Vitis vinifera]
Length = 351
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 15 FVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPAS--GSVLMDAHQKMTDELKLKDLK 69
F+G +Y +W M F++S + W +++ G P+ V++ + DEL K ++
Sbjct: 21 FMGTNYPYWKTKMTWFLQSINLDLWDVIKDGPHIPSKLENGVMVPKPKHEWDELDRKKIQ 80
Query: 70 VKN----YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+ L AIDR + I +AKEIW ++ +EGN +VK+S++ ++E
Sbjct: 81 LNAKAVFILHCAIDRNEFNRIWHCKSAKEIWRLLENTYEGNNQVKESRINIRVHDYELFS 140
Query: 126 MKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCSIEESKDIDS 162
+K E V++ V KILR+L +K+ V +I+E+KD+
Sbjct: 141 IKDFESIVEMCSRFLVIVNELEALGKTYTEVEKVMKILRSLPKKWETKVTAIQEAKDLTK 200
Query: 163 LSEEAEV 169
LS E +
Sbjct: 201 LSLEGLI 207
>gi|20503047|gb|AAM22735.1|AC092388_19 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1213
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 49/178 (27%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+ +M ++ + W V G YDE D + + L
Sbjct: 73 NYIEWAAMMRVRLQVQHMWEAVRYGDVDYDE---------------------DRRALDAL 111
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---- 130
A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L K GE
Sbjct: 112 IAAVLPEMQFSLSQKRTAKEAWDAIVAARIGSDRARKSTLQALRKEWENLAFKPGEDVDD 171
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS-EEA 167
++ + VE + R + EK+ I SIE D+ ++S EEA
Sbjct: 172 FALRLNTLLQKMVQYGDDTYDEERAVEMLFRCVPEKYRQIARSIESLLDLSTMSIEEA 229
>gi|19881703|gb|AAM01104.1|AC098682_8 Putative retroelement [Oryza sativa Japonica Group]
gi|31431122|gb|AAP52944.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 727
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 39/174 (22%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+D + + L A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L
Sbjct: 215 EDRRALDALIAAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLA 274
Query: 126 MKSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
K GE ++ + VEK+ R + EK+ I SIE D+
Sbjct: 275 FKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLS 334
Query: 162 SLSEEAEVKEDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
++S E + +K + G E + +G E W S RKG S+
Sbjct: 335 TMSIEEAL--GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDGRKGESS 386
>gi|77556026|gb|ABA98822.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1567
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 39/174 (22%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+D + + L A+ + ++ +K TAKE WDA+ G+ R KS LQALR+E+E L
Sbjct: 187 EDRRALDALITAVPPEMQFSLSQKRTAKEAWDAIAVAHIGSDRACKSTLQALRKEWENLA 246
Query: 126 MKSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
K GE ++ + VEK+ R + EK+ I SIE D+
Sbjct: 247 FKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLS 306
Query: 162 SLSEEAEVKEDEVKTLLGAEEEEEAGKFA---------EHWTTS----RKGSSN 202
++S E + +K + G E + +G E W S +KG S+
Sbjct: 307 TMSIEEAL--GRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQGDGKKGESS 358
>gi|297720907|ref|NP_001172816.1| Os02g0163901 [Oryza sativa Japonica Group]
gi|255670628|dbj|BAH91545.1| Os02g0163901 [Oryza sativa Japonica Group]
Length = 723
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 30/144 (20%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
KD + + L A+ + ++ +K TAKE WDA+ G+ R +KS LQALR+E+E L
Sbjct: 14 KDRRALDALITAVPPEMQFSLSQKRTAKEAWDAIAAARIGSDRARKSTLQALRKEWENLA 73
Query: 126 MKSGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
K G+ ++ + VEK+ + EK+ I SIE D+
Sbjct: 74 FKPGKDVDDFALRLNNLLQKMVQCDDDTYDEERAVEKLFHCVPEKYRQIARSIESLLDLS 133
Query: 162 SLS-EEA-----EVKEDEVKTLLG 179
++S EEA V +DE + L G
Sbjct: 134 TMSIEEALGRLKVVDDDEPQPLSG 157
>gi|147836440|emb|CAN70892.1| hypothetical protein VITISV_039825 [Vitis vinifera]
Length = 216
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 32/192 (16%)
Query: 7 FSQPAIPRFVGH-YDHWSMLMDNFMRSK--EYWGLVETGYDEPAS--GSVLMDAHQKMTD 61
F++ P F+G Y +W M F++S + W ++E G P VL+ ++ +
Sbjct: 13 FAKHRAPFFMGTDYPYWKTKMTWFLQSTNLDVWDVIEDGPTFPTKLVDGVLVPKPKQEWN 72
Query: 62 ELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
EL ++ KV L +DR + I + +AKEIW ++ EG +VK+S++ L
Sbjct: 73 ELDRRNFQLNAKVVFTLQCVMDRNEYNRIYQCKSAKEIWRLLEITHEGTNQVKESKINLL 132
Query: 118 RREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCSI 154
+E MK E V++ V KILR+L K++ V +I
Sbjct: 133 VHNYELFSMKENETIVEMITRFTDIVNGLEVLGKTYKESEKVMKILRSLPSKWHTKVTAI 192
Query: 155 EESKDIDSLSEE 166
+E+KD+ L E
Sbjct: 193 QEAKDLTKLPME 204
>gi|10177949|dbj|BAB11308.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1013
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 17 GHYDHWSMLMDNFMRS--KEYWGLVETGYDEPA----SGSVLMDAHQKMTDELKLK---D 67
G+Y HW + M +R KE W G+ P +G ++ + TD + K +
Sbjct: 19 GNYGHWKVKMRALIRGLGKEAWIATSVGWKAPVVKGENGEDVLKTEDQWTDAEEAKATAN 78
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ + +F ++++ I+ ++AKE WD + K +EG + VK+S++ L +FE L M
Sbjct: 79 SRALSLIFNSVNQNQFKRIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLASQFENLTMD 138
Query: 128 SGEEDVKIVEKILRTLTEKFN 148
E + KI +E N
Sbjct: 139 ESENIEEFSGKISAIASEAHN 159
>gi|342365847|gb|AEL30380.1| hypothetical protein 205D04_20 [Arachis hypogaea]
Length = 1597
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEP----ASGSVLMDAHQKMTDELKL 65
P F G +Y +W M F+++ +Y W ++ G P A G V + TDE +
Sbjct: 174 PLFNGKNYTYWKERMKIFVQAVDYRLWKIILEGPQYPTVTSAEGVVSLKPEASWTDEDRK 233
Query: 66 K---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
K + K N L AI + + TAKEIWD ++ EG VKK++ L RE+E
Sbjct: 234 KVELNAKAINLLNCAISFKEYRWVSRCTTAKEIWDKLQITHEGTTIVKKTRTDMLNREYE 293
Query: 123 TLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKD 159
+K GE + +V ++LR LT+++ I ES
Sbjct: 294 MFAVKEGESIDELFERFNAIIVGLDALGITHSESVLVRRVLRCLTKEWETKALIISESSS 353
Query: 160 IDSLS 164
+DS++
Sbjct: 354 LDSMT 358
>gi|8778475|gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
Length = 1188
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 29/138 (21%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
K+L + LFQ+I + I TAKE+WD++K + G RVK+++LQ L EFE ++
Sbjct: 56 KNLMARGLLFQSIPEALTLQIGNLQTAKEVWDSIKTRNVGAERVKEARLQTLMAEFEKIK 115
Query: 126 MKSGE-----------------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDID 161
MK E E K+V+K L +L +K+ I+ S+E+ D++
Sbjct: 116 MKETEKIDDFAGKLSEISTKSAALGVNIEVPKLVKKFLNSLPRKKYIHIIASLEQVLDLN 175
Query: 162 SLSEE-----AEVKEDEV 174
+ S E +V ED V
Sbjct: 176 NTSFEDIIGRMKVYEDRV 193
>gi|108711556|gb|ABF99351.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1190
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
+ +A+ + +L T+ K+TAKE WD+++ G RV+KS+ Q R+++ +E K GE V
Sbjct: 6 ILRAVPQEMLLTLAVKETAKEAWDSIRVMRVGVDRVRKSKAQLFLRQYDAIEFKEGES-V 64
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDI----DSLSEEAEVKEDEVKTLLGAEE---EEEA 186
+ L L + IEESK + +++ E + ++TLL EE EE
Sbjct: 65 EDFSLRLNNLVTTLVTLGAPIEESKVVQKFLNAVPEHLQQIALSIETLLDVEELSLEEVT 124
Query: 187 GKFAEHWTTSRKGSSNCHSTWKAQDV 212
G +A+ RK + + K DV
Sbjct: 125 GHWAKDCRQPRKNTEAHQAHAKEDDV 150
>gi|31126757|gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1182
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
+ +A+ + +L T+ K+TAKE WD+++ G RV+KS+ Q R+++ +E K GE V
Sbjct: 6 ILRAVPQEMLLTLAVKETAKEAWDSIRVMRVGVDRVRKSKAQLFLRQYDAIEFKEGES-V 64
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDI----DSLSEEAEVKEDEVKTLLGAEE---EEEA 186
+ L L + IEESK + +++ E + ++TLL EE EE
Sbjct: 65 EDFSLRLNNLVTTLVTLGAPIEESKVVQKFLNAVPEHLQQIALSIETLLDVEELSLEEVT 124
Query: 187 GKFAEHWTTSRKGSSNCHSTWKAQDV 212
G +A+ RK + + K DV
Sbjct: 125 GHWAKDCRQPRKNTEAHQAHAKEDDV 150
>gi|39546216|emb|CAE04465.3| OSJNBa0029L02.6 [Oryza sativa Japonica Group]
Length = 252
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 54/195 (27%)
Query: 8 SQPAIP--RFVGH-----------YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMD 54
S P +P R GH Y W++LM ++ + W ++ GY E +
Sbjct: 37 SLPLVPQGRDAGHTTRLPVLSRTNYPDWALLMRVNLQEQGLWKAIDPGYVEFREDRAALS 96
Query: 55 AHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL 114
A + QA+ R +L + K DTAK DA+K G RV+++
Sbjct: 97 A------------------ILQAVPREMLRGLAKHDTAKAACDAIKTMRIGVDRVREANE 138
Query: 115 QALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIV 151
Q RR+FE + K GE ED I +K+L + +K+ +
Sbjct: 139 QGFRRQFEAMRFKDGETPEEFAIRLTAIVADIRDMGGVMEDEHINKKLLCVVPKKYKPVA 198
Query: 152 CSIEESKDIDSLSEE 166
S+E+ D+ +++ E
Sbjct: 199 ISLEQLLDVKTMALE 213
>gi|12584302|gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
Length = 1643
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 17 GHYDHWSMLMDNFMRS--KEYWGLVETGYDEPA----SGSVLMDAHQKMTDELKLK---D 67
G+Y HW + M +R KE W G+ P +G ++ + TD + K +
Sbjct: 19 GNYGHWKVKMRALIRGLGKEAWIATSVGWKAPVVKGENGEDVLKTEDQWTDAEEAKATAN 78
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ + +F ++++ I+ ++AKE WD + K +EG + VK+S++ L +FE L M
Sbjct: 79 SRALSLIFNSVNQNQFKRIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLASQFENLTMD 138
Query: 128 SGEEDVKIVEKILRTLTEKFN 148
E + KI +E N
Sbjct: 139 ESENIEEFSGKISAIASEAHN 159
>gi|147765931|emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera]
Length = 1798
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 23/106 (21%)
Query: 82 ILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE---------- 131
I I +T K +WD ++ +FEG+ RVK +L L++EFE ++MK E
Sbjct: 265 IFTEIMNLETPKLVWDKLQGEFEGSERVKTVRLLTLKKEFELMKMKDDESVKDYSGRLMD 324
Query: 132 -------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D K+VEKI+ ++ +KF + +IEES D+ +L+
Sbjct: 325 VVNQIRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEESYDLQTLT 370
>gi|38568037|emb|CAD40411.3| OSJNBa0065J03.7 [Oryza sativa Japonica Group]
Length = 1414
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 20/128 (15%)
Query: 4 EGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL 63
+G+ P + R +Y W++LM ++++ W V+TG D P
Sbjct: 1266 DGSVYYPILRR--SNYSDWAVLMRVNLQAQGLWDAVDTG-DVPYQ--------------- 1307
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
+D + + + +A+ ++ + +KD+AK+ WDA+K G RVK+S+ Q LR+ FE+
Sbjct: 1308 --EDCQALSAILRAVPAEMVRPLAEKDSAKDAWDALKSMRVGADRVKESRAQKLRQTFES 1365
Query: 124 LEMKSGEE 131
+ K+GE
Sbjct: 1366 MRFKNGEH 1373
>gi|387169508|gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]
Length = 1273
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 32/141 (22%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK------ 127
LFQA+ ++ + ++T K +WDA+K + +G RVK+++LQ L EFE + MK
Sbjct: 64 LFQAMPEALILQVGDQETPKAVWDAIKSRHQGADRVKEARLQTLMSEFERIRMKDTYTID 123
Query: 128 --SGE---------------EDVKIVEKILRTLTE-KFNDIVCSIEESKDIDSLSEEAEV 169
SG+ E+ K+V+K L +L +F I+ S+E+ D++
Sbjct: 124 SFSGKLSEIASKSSSLGGKIEETKLVKKFLNSLPRGRFIQIIASLEQVLDLNKTG----- 178
Query: 170 KEDEVKTLLGAEE---EEEAG 187
ED V L EE +EEAG
Sbjct: 179 FEDIVGRLKAYEERILDEEAG 199
>gi|356544970|ref|XP_003540919.1| PREDICTED: uncharacterized protein LOC100777793 [Glycine max]
Length = 350
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
K ++ LF I + I I + K IWD +K+++ G+ R++ Q+ LRREFE M+
Sbjct: 11 KARSCLFTGISQMIFIRIMTLKSPKAIWDYLKEEYAGDDRIRSMQVLNLRREFELQRMQE 70
Query: 129 GEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEVKTLLGAEEEE 184
E + K+L + K + S+E +KD+ ++ AEV + E + L+ +
Sbjct: 71 SETIKEYSNKLL-GIANKIKLLGTSLENTKDLSKIT-LAEVLHTLQAQEQRRLMRQDRVV 128
Query: 185 EAGKFAEHWTTSRKGSSNCHSTWKAQDVSFR 215
E A+H +K C K FR
Sbjct: 129 EGALPAKHHEDKKKNYPPCQHCGKKGHAPFR 159
>gi|9665114|gb|AAF97298.1|AC007843_1 Hypothetical protein [Arabidopsis thaliana]
Length = 362
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 24/125 (19%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
K+L + LFQ+I + I TAKE+WD++K + G RVK+++LQ L EFE ++
Sbjct: 56 KNLMARGLLFQSIPEALTLQIGNLQTAKEVWDSIKTRNVGAERVKEARLQTLMAEFEKIK 115
Query: 126 MKSGE-----------------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDID 161
MK E E K+V+K L +L +K+ I+ S+E+ D++
Sbjct: 116 MKETEKIDDFAGKLSEISTKSAALGVNIEVPKLVKKFLNSLPRKKYIHIIASLEQVLDLN 175
Query: 162 SLSEE 166
+ S E
Sbjct: 176 NTSFE 180
>gi|147766510|emb|CAN67680.1| hypothetical protein VITISV_019494 [Vitis vinifera]
Length = 301
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 21 HWSMLMDNFMRSK--EYWGLVETGYDEPAS--GSVLMDAHQKMTDELKLKDLKVKN---- 72
+W M F++S + W ++E G P+ V++ + DEL K +++
Sbjct: 28 YWKTKMTWFIQSTNLDLWDVIEDGPHIPSKLENGVMVPKLKXEWDELDRKKVQLNAKAIF 87
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEED 132
L AIDR + I +AKEIW ++ +EGN +VK+S++ L ++E +K E
Sbjct: 88 ILHCAIDRNEFNRIWHCKSAKEIWKLLEVTYEGNDQVKESKINILMHDYELFSIKEFESI 147
Query: 133 VKI-----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V++ V KILR+L +K+ V I+E+KD+ LS E
Sbjct: 148 VEMFSRFLVIVNELEALGKTYTEVEKVMKILRSLPKKWETKVTXIQEAKDLTKLSLE 204
>gi|92886100|gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Medicago truncatula]
Length = 1654
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
PRF G + W M +F+ +E W ++E G D+ ++ H +L
Sbjct: 32 PRFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ FEG+ +VK+++ L ++E
Sbjct: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVK-------IVEKILRTLTEKFNDIVCSIEESKDI 160
MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEE 166
++LS E
Sbjct: 212 NTLSVE 217
>gi|357439729|ref|XP_003590142.1| Aspartyl-tRNA synthetase [Medicago truncatula]
gi|355479190|gb|AES60393.1| Aspartyl-tRNA synthetase [Medicago truncatula]
Length = 737
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M NF+ +E W ++E G D+ ++ H +L
Sbjct: 32 PKFNGDPEEFSWWKTNMYNFIMGLDEELWDILEDGVDDLDLDEEGAAIDRKIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ FEG+ +VK+++ L ++E
Sbjct: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVK-------IVEKILRTLTEKFNDIVCSIEESKDI 160
MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEE 166
++LS E
Sbjct: 212 NTLSVE 217
>gi|147801346|emb|CAN74842.1| hypothetical protein VITISV_012791 [Vitis vinifera]
Length = 420
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM------- 126
+F I I +AKE WD ++ EG + VK S+LQ L FET+ M
Sbjct: 142 IFNVISTDEFRRITTCTSAKEAWDILQVTHEGTSAVKVSKLQMLTSRFETIRMDDHKTFR 201
Query: 127 --------------KSGEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE + K+V KILR+L ++F V +IEESKD++SL
Sbjct: 202 EFHAKLMDIVNSNFNPGEPISNSKVVRKILRSLPKRFRAKVTAIEESKDVESL 254
>gi|147838603|emb|CAN65059.1| hypothetical protein VITISV_008903 [Vitis vinifera]
Length = 539
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 32/193 (16%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETG--YDEPASGSVLMDAHQKMT 60
NFS+ P F+G Y +W M +++S + + ++E G + VL+ ++
Sbjct: 12 NFSKHRAPFFMGIDYPYWKTRMTWYLQSTDLDVYDVIEDGPTFLTKLVDGVLVPKPKQEW 71
Query: 61 DELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL ++ KV L A+DR + I + +AKEIW + EG RVK+S++
Sbjct: 72 NELDRRNFQLNAKVVFTLQCAMDRNEYNRICQCKSAKEIWRLFEITHEGTNRVKESKINL 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L +E MK E V++ V KILR+L K++ V +
Sbjct: 132 LVHNYELFSMKETETIVEMITRFTDIVNGLEALGKTYKESEKVMKILRSLPSKWHTKVTA 191
Query: 154 IEESKDIDSLSEE 166
I+E+KD+ L E
Sbjct: 192 IQEAKDLTKLPME 204
>gi|38346799|emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]
Length = 1403
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 41/160 (25%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+++M ++++ W VE G + + + M+A + +A
Sbjct: 61 NYGDWALMMKVMLQARGLWDAVEHGDADFQADRMAMEA------------------ILRA 102
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +L ++ K +AKE WDA+K G RV+KS+ Q L+++++ +E K GE
Sbjct: 103 MPPEMLASLAVKPSAKEAWDAIKTMRVGVDRVRKSKAQMLQKQYDAMEFKDGETVEEFSL 162
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSI 154
E+ K+VEK L ++ + + I SI
Sbjct: 163 RLNGLVTNLATLGVHLEEGKVVEKFLNSVPDHLSQIALSI 202
>gi|77552486|gb|ABA95283.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|215767919|dbj|BAH00148.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1369
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 31/139 (22%)
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDV- 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + E ED
Sbjct: 36 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRAEYESLAFRGDETVEDFA 95
Query: 134 --------------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
K+VEK LR +FN ++ SIE DI +LS E E
Sbjct: 96 LRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME------E 149
Query: 174 VKTLLGAEEEEEAGKFAEH 192
V L A E++G+ + H
Sbjct: 150 VTGRLKA--AEDSGQSSSH 166
>gi|440577334|emb|CCI55340.1| PH01B019A14.9 [Phyllostachys edulis]
Length = 1594
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 14 RFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDL----- 68
R+ GH+++ +++ D + L +T Y E A+ + + M D ++ D+
Sbjct: 159 RYRGHHEYQAVVRD-VGPGGGWPTLTKTNYVEWAAVMRVKLQVRHMWDAVRYGDVDYDQD 217
Query: 69 -KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ + L A+ + ++ K TAK+ WDA+ G+ R +KS LQALR+E+E L K
Sbjct: 218 RRALDALIAAVPPEMQFSLTNKRTAKKAWDAIAAARIGSDRARKSTLQALRKEWENLAFK 277
Query: 128 SGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE+ + + VEK+ R + EK+ + SIE D+ ++
Sbjct: 278 PGEDVDDFALRLNTLLQKLVQFGDDTYGEERAVEKLFRCVPEKYKQMARSIESLLDLSTM 337
Query: 164 S-EEA-----EVKEDEVKTLLG 179
+ EEA V DE + L G
Sbjct: 338 TIEEALGRLKVVDSDEPQRLSG 359
>gi|307135896|gb|ADN33760.1| gag-pol polyprotein [Cucumis melo subsp. melo]
Length = 198
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 35/157 (22%)
Query: 36 WGLVETGYDEPASGSVLMDAHQKMTDELKLKDL---------KVKNYLFQAIDRTILDTI 86
W + GY EP++ + MD + ++ D+ + N +F +D + I
Sbjct: 40 WRALVAGY-EPST--ITMDGVLVLKPKVDWADVEEQASVGNARAPNPIFNGVDLNLFKPI 96
Query: 87 RKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---------------- 130
T KE W ++ EG ++VK S+LQ + +FE L+M E
Sbjct: 97 HSCSTTKEAWSILEGSCEGTSKVKISRLQLITSKFEALKMSEDESVSEYNERVLEIANES 156
Query: 131 -------EDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
D IV KILR+L KF+ V +IEE+ DI
Sbjct: 157 LLLGEKIPDSMIVWKILRSLPRKFDMKVTTIEEAYDI 193
>gi|147828645|emb|CAN75289.1| hypothetical protein VITISV_028208 [Vitis vinifera]
Length = 763
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M+ ++ + + W V Y+ P A K+ +E + + K K LF + TI
Sbjct: 1 MEAYLDASDLWEAVSEEYEVPLLFDNPTMAQIKLHNERRQRKSKAKASLFVVVSSTIFTR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I T IW+ +KK++EGN RVK Q+ L REFE MK E
Sbjct: 61 IMTLKTTNGIWNFLKKEYEGNERVKGMQVLNLIREFEMQRMKELE 105
>gi|7523670|gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1150
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 24/115 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
LFQ+I + I + DTA+E+WDA+K + G RVK ++LQ L EF+ L MK E
Sbjct: 69 LFQSIPEALALQIGELDTAREVWDAIKSRHLGVERVKDARLQTLMAEFDRLTMKDSEKIY 128
Query: 131 --------------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDIDSLS 164
E+ ++V+K L+++ K+ IV ++E+ D+++++
Sbjct: 129 DFAGKLSEISAKSAALGVIIEESRLVKKFLKSVPRRKYIHIVAALEQVLDLNTIT 183
>gi|357142055|ref|XP_003572444.1| PREDICTED: uncharacterized protein LOC100837583 [Brachypodium
distachyon]
Length = 237
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 23/104 (22%)
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------- 130
+ K TAKE+WD++K +F G RVK +L LR EF+ L M GE
Sbjct: 41 VSTKKTAKEVWDSLKTRFVGADRVKAVRLSTLRGEFDMLCMAEGEPLEDYAGKIIGMAAR 100
Query: 131 --------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
++ +V+K+L T+ ++ + V IE+ D+++L+ E
Sbjct: 101 YASLGSTLDNAAMVKKLLDTVPDRLHSAVVGIEQFCDVETLAFE 144
>gi|4773900|gb|AAD29770.1|AF074021_2 putative transposon protein [Arabidopsis thaliana]
gi|7267214|emb|CAB80821.1| putative transposon protein [Arabidopsis thaliana]
Length = 590
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 45/222 (20%)
Query: 11 AIPRFVG----HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELK 64
AIP+ + HY +W +L+ ++S + W VE G+ P + D K E
Sbjct: 341 AIPKPLKLDAEHYGYWKVLIKRSIQSIDMDAWFAVEDGWMPPTTKDAKRDIVSKSRTEWI 400
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDT-------AKEIWDAMKKKFEGNARVKKSQLQAL 117
+ N+ QA+ +R K T AKE+W+ ++ FE VK+++L L
Sbjct: 401 ADEKTAANHNSQALSVIFGSLLRNKFTQVQGCLSAKEVWEILQVSFECTNNVKRTRLDML 460
Query: 118 RREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSI 154
EFE L M++ E +D K+V+K LR+L +KF +I
Sbjct: 461 ASEFENLTMEAEESVDDFNGKLSSITQEAVVLGKTYKDKKMVKKFLRSLPDKFQSHKSAI 520
Query: 155 EESKDIDSLSEEAEVKEDEVKTLLGA---EEEEEAGKFAEHW 193
+ S + D L K D+V ++ A ++EE +A ++
Sbjct: 521 DVSLNSDQL------KFDQVVGMMQAYDTDKEEILNSYATYF 556
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEP-ASGSVLMDAHQKMT--DELKLKDLKVKNYL 74
+Y W + M ++K+ W +V+ G +P A G +A Q+ T + LKDL L
Sbjct: 14 NYGFWRIKMKTIFQTKKLWEIVDEGVPKPPAEGDHSPEAVQQKTRCEAASLKDLTALQIL 73
Query: 75 FQAIDRTILDTIRKKDTA-KEIWDA--MKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
A+ +I I +A + W+ +K K N ++L + + GEE
Sbjct: 74 QTAVSDSIFPRIAPASSALGKPWEYENLKMKESDNINTFMTKLIEMGNQLRV----HGEE 129
Query: 132 --DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +IV+KIL +L ++F+ IV ++++KD+ SLS
Sbjct: 130 KSDYQIVQKILISLPKRFDIIVAMMKQTKDLTSLS 164
>gi|147771224|emb|CAN76440.1| hypothetical protein VITISV_001760 [Vitis vinifera]
Length = 222
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 131 EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
EDV IVEKILR++T KFN +VCSIEES DID LS
Sbjct: 15 EDVTIVEKILRSMTPKFNFVVCSIEESHDIDELS 48
>gi|4006828|gb|AAC95170.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 916
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 17 GHYDHWSMLMDNFMRS--KEYWGLVETGYDEPA----SGSVLMDAHQKMTDELKLK---D 67
G+Y HW + M +R KE W G+ P G ++ + D + K +
Sbjct: 31 GNYGHWKVKMRALIRGLGKEAWIATSIGWKAPVIKGEDGEDVLKTEDQWNDAEEAKATAN 90
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ + +F ++++ I+ ++AKE WD + K +EG + VK+S++ L +FE L M+
Sbjct: 91 SRALSLIFNSVNQNQFKQIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLASQFENLTME 150
Query: 128 SGEEDVKIVEKILRTLTEKFN 148
E + KI +E N
Sbjct: 151 ETENIEEFSGKISAIASEAHN 171
>gi|147815231|emb|CAN65499.1| hypothetical protein VITISV_010671 [Vitis vinifera]
Length = 750
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E NF IP G +Y W++ M +++ + W VE Y+ G K+
Sbjct: 1 MDGETNFL--LIPVVNGDNYQAWAIRMAVHLKALDLWETVEEDYEVLPLGDNPSINQMKI 58
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
E K K K LF +A IW+ +K +++GN V+ QL ++
Sbjct: 59 HRERKTMKAKAKACLFST-------------SAVTIWEHLKNEYQGNKMVQNMQLLSIAN 105
Query: 120 EFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+ + +E +IV+KIL TL+EK+ + S+E SK + S+S
Sbjct: 106 KVRLYGKEFSDE--RIVQKILVTLSEKYEATISSLENSKHLSSIS 148
>gi|147775386|emb|CAN60490.1| hypothetical protein VITISV_030841 [Vitis vinifera]
Length = 1000
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSK--EYWGLVETGYDEPAS--GSVLMDAHQKMT 60
N S+ P F G Y +W M +++S E W ++E G P VL+ ++
Sbjct: 12 NCSKHRAPFFTGTDYPYWKDRMTWYLQSTDLEVWDVIEDGPTFPTKLVDGVLVPKPKQEW 71
Query: 61 DELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL ++ KV L A+DR + I + + KEIW ++ EG +VK+S++
Sbjct: 72 NELDRRNFQLNAKVVFTLQCAMDRNEYNRICQCKSIKEIWRLLEITHEGTNQVKESKINI 131
Query: 117 LRREFETLEMKSGEEDVKIVE-----------------------KILRTLTEKFNDIVCS 153
L +E MK E V+++ KILR+L K++ V +
Sbjct: 132 LVHNYELFSMKETESIVEMITRFTEIVNGLEALGKVIXESEKVIKILRSLPSKWHTKVTA 191
Query: 154 IEESKDIDSLSEE 166
I+E+KD+ L E
Sbjct: 192 IQEAKDLTKLPME 204
>gi|326500412|dbj|BAK06295.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533564|dbj|BAK05313.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 229
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
KD + L + +L + K TAKE+WD++K +F G RV+ ++L LR +F+ L+
Sbjct: 57 KDKAARVMLLGTLPEDVLLQVATKLTAKEVWDSLKVRFVGADRVRTARLATLRGDFDRLK 116
Query: 126 MKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDS 162
M GE D +V+K+L + ++ +V IE+ D+ +
Sbjct: 117 MTDGEALDAYAGRLAGMTARFASLGETLGDAVLVKKLLDIVPDRLFPVVAGIEQFCDVTT 176
Query: 163 LS 164
++
Sbjct: 177 MA 178
>gi|224127156|ref|XP_002320001.1| predicted protein [Populus trichocarpa]
gi|222860774|gb|EEE98316.1| predicted protein [Populus trichocarpa]
Length = 175
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 7 FSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-EPASGSVLMDAHQKMTDELK 64
+S + P F G +Y + M ++++ ++W VE ++ +P + A + E +
Sbjct: 6 YSLASPPEFTGGNYQMQVVRMKTYLQACDFWDAVEQEHETQPLPADPTL-AQIRNHREER 64
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+ K K L+ A+ I I DTAK+IW+ ++++F GN R+ + Q Q RR
Sbjct: 65 ARKFKAKTCLYSAVSEAIFSRIIALDTAKQIWNYLQEEFHGNERIIQMQAQEQRR 119
>gi|54287533|gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1577
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 32/165 (19%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G +Y W + M +++ + W +V+ G+ +G+ LM+ + L+L + +
Sbjct: 12 PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLMEIDHR---NLQL-NAQ 65
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
N LF ++ + D + +TA EIW+ + + EG + K ++L L+ ++ET M
Sbjct: 66 AMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQYETFSMLPH 125
Query: 130 EE-----------------------DVKIVEKILRTLTEKFNDIV 151
E D+++ +K+LR L EK+ +V
Sbjct: 126 ESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLV 170
>gi|147812065|emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera]
Length = 977
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 26/137 (18%)
Query: 82 ILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE---------D 132
I I +T K++WD ++ +FEG+ RVK +L L+REFE ++MK E D
Sbjct: 23 IFTKIMNLETPKQVWDKLQGEFEGSERVKTVRLLTLKREFELMKMKDDESIKDYSGRLMD 82
Query: 133 V--------------KIVEKILRTLTEKFNDIVCSIEESKDIDSLS---EEAEVKEDEVK 175
V K+VE I+ ++ + F + +IEES D+ +L+ ++ E K
Sbjct: 83 VVNQIRLLGEAFTNQKVVENIMVSVPQNFEAKIFAIEESCDLQTLTIVELTSKFHAQEQK 142
Query: 176 TLLGAEEEEEAGKFAEH 192
L+ ++ E A H
Sbjct: 143 VLMRGDKTTEGAFQANH 159
>gi|147801040|emb|CAN60115.1| hypothetical protein VITISV_040259 [Vitis vinifera]
Length = 243
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 32/191 (16%)
Query: 6 NFSQPAIPRFVGH-YDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMT 60
+F+ P F+G Y +W M F++S + W ++E G P+ V++ ++
Sbjct: 12 SFATNRPPFFIGTDYPYWKPKMTWFLQSTDLDXWDIIEDGLTFPSKLVYGVMVPKPKQEX 71
Query: 61 DELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
DE ++ KV L ++DR + I + +AKEIW ++ EG +VK+S++
Sbjct: 72 DERDRRNFQLNAKVXYTLQCSMDRNEFNRICQCKSAKEIWRLLEITHEGTNQVKESKINL 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L +E +K E V++ V KILR+L K++ V +
Sbjct: 132 LVYSYELFFIKDNETIVEMITRFTDIVNGLEALGKTYKESAKVMKILRSLXSKWHTKVTT 191
Query: 154 IEESKDIDSLS 164
I+E+KD+ L
Sbjct: 192 IQEAKDLTKLP 202
>gi|226500000|ref|NP_001150428.1| retrotransposon protein [Zea mays]
gi|195639184|gb|ACG39060.1| retrotransposon protein [Zea mays]
Length = 274
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAI 78
Y W++ +++ + ++ W V P +G V +K+ + L QA+
Sbjct: 38 YTAWAIKVESILDAQGLWEAVSP----PDNGEVN-----------AVKNKTARAQLLQAL 82
Query: 79 DRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------- 130
IL + K TA E+W ++K +F G RVK ++L L+ EF+ L M+ E
Sbjct: 83 PDDILMQVSIKKTAAEVWASLKTRFVGADRVKTARLATLKGEFDKLYMEDEEALDDYAGK 142
Query: 131 ---------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+D +V+K+L T+ ++ +V IE+ D++++ E
Sbjct: 143 ISGMAARYAGLGATLDDAAMVKKLLDTVPDRLFPVVAGIEQFCDVETMPFE 193
>gi|356529174|ref|XP_003533171.1| PREDICTED: uncharacterized protein LOC100814595 [Glycine max]
Length = 650
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+ M + + + W VE Y+ + A K E K + K + LF
Sbjct: 30 NYQIWTARMKAHLEANDLWEAVEEDYEVLPLPTNPTMAQIKNQKERKARKSKARASLFAV 89
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ + I I +A EIW +K ++EG+ R+K Q L REFE +MK E +
Sbjct: 90 VSKEIFTRIMTIKSAYEIWSFLKNEYEGDERIKGMQALNLVREFEIQKMKESEIIKEYAN 149
Query: 138 KILRTLTEKFNDI 150
K+L + D+
Sbjct: 150 KLLSIANKNIKDL 162
>gi|147778209|emb|CAN72043.1| hypothetical protein VITISV_027478 [Vitis vinifera]
Length = 281
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSK--EYWGLVETGYDEPAS--GSVLMDAHQKMTDELKLK- 66
P F G Y HW M F++S + W ++E G P+ V++ ++ DEL K
Sbjct: 19 PFFTGIDYPHWKTKMTWFLQSTNLDLWDVIEDGPHIPSKLENGVMVSKPKQEWDELDRKK 78
Query: 67 ---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
++KV L AIDR + I + +AKEIW ++ EG +VK+S++ L ++E
Sbjct: 79 VQLNVKVVFILHCAIDRNEFNHIWQCKSAKEIWRLLEITHEGTNQVKESRINILVHDYEL 138
Query: 124 LEMKSGEEDVKIVEKILRTLTE 145
+K E ++ + + + E
Sbjct: 139 FSIKDFESIXEMFSRFMVIVNE 160
>gi|38346561|emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]
Length = 1539
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + K EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAKIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAKKMLRALPEKYETLV 170
>gi|357440143|ref|XP_003590349.1| TNP1 [Medicago truncatula]
gi|355479397|gb|AES60600.1| TNP1 [Medicago truncatula]
Length = 474
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M +F+ +E W ++E G D+ ++ H +L
Sbjct: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRKIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ FEG+ +VK+++ L ++E
Sbjct: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVK-------IVEKILRTLTEKFNDIVCSIEESKDI 160
MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEE 166
++LS E
Sbjct: 212 NTLSVE 217
>gi|116309492|emb|CAH66560.1| OSIGBa0113K06.6 [Oryza sativa Indica Group]
Length = 1539
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + K EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAKIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAKKMLRALPEKYETLV 170
>gi|147769512|emb|CAN74653.1| hypothetical protein VITISV_022992 [Vitis vinifera]
Length = 108
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MTSE + + A F G +Y W + M+ ++ + + W V Y+ P + A K+
Sbjct: 1 MTSEASLNALAPLVFDGMNYQVWVVRMEAYLDASDLWEAVSEEYEVPPLSNNPTMAQIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGN 106
+E + + K K LF + TI I T EIW+ +KK++EGN
Sbjct: 61 HNERRQRKSKAKASLFTTVSSTIFTRIMTLKTTNEIWNFLKKEYEGN 107
>gi|4773881|gb|AAD29754.1|AF076243_1 putative transposon protein [Arabidopsis thaliana]
gi|7267199|emb|CAB77910.1| putative transposon protein [Arabidopsis thaliana]
Length = 1008
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 17 GHYDHWSMLMDNFMRS--KEYWGLVETGYDEPA----SGSVLMDAHQKMTD--ELKLK-D 67
G+Y HW + M +R KE W G+ P G ++ + D E K K +
Sbjct: 19 GNYGHWKVKMRALIRGLGKEAWIATSIGWKAPVIKGEDGEDVLKTKDQWNDAEEAKAKAN 78
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ + +F +++ I+ ++AKE WD + K +EG + VK+S++ L +FE L M+
Sbjct: 79 SRALSLIFNFVNQNQFKRIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLASQFENLSME 138
Query: 128 SGEEDVKIVEKILRTLTEKFN 148
E + KI +E N
Sbjct: 139 ETENIEEFSGKISAIASEAHN 159
>gi|359494339|ref|XP_003634761.1| PREDICTED: uncharacterized protein LOC100852612 [Vitis vinifera]
Length = 697
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+F AI I + KE WD ++ EG VK S+LQ FET+ M+ E
Sbjct: 321 IFNAISTDEFGRIVTCTSTKEAWDILQVTHEGTNIVKVSKLQMFTSRFETIRMEDRENFG 380
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+L +F V IEESKD+DSL
Sbjct: 381 EFHAKLMNIVNSSFNLGESIPNSKVVRKILRSLPVRFRAKVTVIEESKDVDSL 433
>gi|87240724|gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic [Medicago truncatula]
Length = 1715
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M +F+ +E W ++E G D+ ++ H +L
Sbjct: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ FEG+ +VK+++ L ++E
Sbjct: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVK-------IVEKILRTLTEKFNDIVCSIEESKDI 160
MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEE 166
++LS E
Sbjct: 212 NTLSVE 217
>gi|147837624|emb|CAN70330.1| hypothetical protein VITISV_027936 [Vitis vinifera]
Length = 381
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 23/96 (23%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM---------------------KSG 129
+AKE WD ++ EG +K S+LQ L FET+ M G
Sbjct: 227 SAKEAWDILQVTHEGTNAMKVSKLQMLTSRFETIRMDDHKTFREFHAKLMDIVNSNFNPG 286
Query: 130 EE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
E + K+V KILR+L E+F V +IEESKD++SL
Sbjct: 287 EPISNSKVVRKILRSLPERFRAKVTAIEESKDVESL 322
>gi|78708103|gb|ABB47078.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF + + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNCLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEM-----------KSGEEDVKIVEKILRTLTEKFNDIV 151
+ ++ET M + +++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFSMLNVIVNDLKGLGANYTVLEVAQKMLRALPEKYETLV 158
>gi|357440145|ref|XP_003590350.1| TNP1 [Medicago truncatula]
gi|355479398|gb|AES60601.1| TNP1 [Medicago truncatula]
Length = 363
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M +F+ +E W ++E G D+ ++ H +L
Sbjct: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRKIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ FEG+ +VK+++ L ++E
Sbjct: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVK-------IVEKILRTLTEKFNDIVCSIEESKDI 160
MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEE 166
++LS E
Sbjct: 212 NTLSVE 217
>gi|357487903|ref|XP_003614239.1| hypothetical protein MTR_5g046840 [Medicago truncatula]
gi|355515574|gb|AES97197.1| hypothetical protein MTR_5g046840 [Medicago truncatula]
Length = 164
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 55/147 (37%)
Query: 24 MLMDNFMRSKEYWGLVETGY-DEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTI 82
MLM+N + SKEYW L+ TG + P + + +K+ + KL DLK +N +
Sbjct: 1 MLMENLLHSKEYWSLITTGMINAPENPT---PEQEKVAKDSKLCDLKERNLI-------- 49
Query: 83 LDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------ 130
KD+AK+IWDAM++K+ + ++ L MK GE
Sbjct: 50 ------KDSAKDIWDAMRRKYHDSTKI--------------LAMKEGESIDEYFAITLSI 89
Query: 131 -----------EDVKIVEKILRTLTEK 146
+ +VEKILR+LT++
Sbjct: 90 VNKITTRGEKMDQTLLVEKILRSLTKQ 116
>gi|357459093|ref|XP_003599827.1| hypothetical protein MTR_3g047520 [Medicago truncatula]
gi|355488875|gb|AES70078.1| hypothetical protein MTR_3g047520 [Medicago truncatula]
Length = 329
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 37/210 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M N++ +E W ++E G D+ ++ H +L
Sbjct: 32 PKFNGDPEEFSWWKTNMYNYIMGLDEELWDILEDGVDDLDLDEEGAAIDRKIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ +EG+ +VK+++ L ++E
Sbjct: 92 YKKYHKIRGIIVASIPRTKYMKMSDKSTAKAMFASLCANYEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVKI-------VEKILRTLTEKFNDIVCSIEESKDI 160
+MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FKMKDDESIEEMYSRFQTLVSGMQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEEAEVKEDEV----KTLLGAEEEEEA 186
++LS E ++K + K +E EEE+
Sbjct: 212 NTLSVE-DLKNKSIALPSKAYKASESEEES 240
>gi|6598575|gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]
Length = 1463
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 42/199 (21%)
Query: 19 YDHWSMLMDNFMRSK--EYWGLVETGYDEP----ASGSVLMDAHQKMTDELKLK---DLK 69
Y +W + M +R + + W VE G++ P G + T E KL+ + +
Sbjct: 21 YGYWKVRMTQIIRGQGEDAWTAVEEGWEPPFDLTEDGFKITKPKANWTAEEKLQSKFNAR 80
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
N + ID I+ +AK+ WD ++K EG + VK+++L + +FE L+M+
Sbjct: 81 AMNAIVNGIDEDEFKLIQGCKSAKQAWDTLQKSHEGTSSVKRTRLDHIATQFEYLKMEPY 140
Query: 130 E-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL--- 163
E +D K+V+K+LR L KF + + + D +
Sbjct: 141 ETIVKFSSKISALANEAEVLGKTYKDQKLVKKLLRCLPPKFPAHKAVMRVAGNTDKISFV 200
Query: 164 -------SEEAEVKEDEVK 175
SEE E +D+VK
Sbjct: 201 DLVGMLKSEEMEPDQDKVK 219
>gi|147838262|emb|CAN65521.1| hypothetical protein VITISV_025368 [Vitis vinifera]
Length = 1291
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+F I I +AKE WD ++ EG VK S+L L FET+ ++ E
Sbjct: 95 IFNVISTDEFRRIATCTSAKEAWDILQVTHEGTNVVKVSKLHMLTSRFETIRIEDHENFG 154
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+ E+F V +IEESKD+DSL
Sbjct: 155 EFHAKLIDIVNSSFNLGEPIPNSKVVRKILRSFPERFKAKVIAIEESKDVDSL 207
>gi|158578535|gb|ABW74560.1| polyprotein [Boechera divaricarpa]
Length = 642
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 42/173 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+M M +R + W ++E+ + + LFQ+
Sbjct: 6 NYTVWAMRMKVGLRVHKVWKVIESSNQDSEKNDI------------------ATALLFQS 47
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
I +++ + ++DT K IW+A+K + G V++++LQ L EF+ L MK +
Sbjct: 48 ISESLILQLGEQDTTKGIWEAIKTRHMGADHVREARLQTLNSEFDRLVMKDSDIIDNFAG 107
Query: 131 ----------------EDVKIVEKILRTLTE-KFNDIVCSIEESKDIDSLSEE 166
E+ K+V+K L++L KF I+ S E+ D+++ E
Sbjct: 108 NLFEISSRSAALGEVIEESKLVKKFLKSLPRYKFIHIIASFEQVLDLNTTGNE 160
>gi|20043059|gb|AAM08867.1|AC113339_13 Putative retroelement [Oryza sativa Japonica Group]
Length = 1061
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF + + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNCLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEM-----------KSGEEDVKIVEKILRTLTEKFNDIV 151
+ ++ET M + +++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFSMLNVIVNDLKGLGANYTVLEVAQKMLRALPEKYETLV 158
>gi|32487924|emb|CAE05272.1| OSJNBb0014D23.6 [Oryza sativa Japonica Group]
Length = 1475
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFYIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L+EK+ +V
Sbjct: 114 KIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALSEKYETLV 170
>gi|224096500|ref|XP_002310635.1| predicted protein [Populus trichocarpa]
gi|222853538|gb|EEE91085.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 34/160 (21%)
Query: 15 FVG-HYDHWSMLMDNFMRSKEYWGLV---ETGYDEPASGSVLMDAHQKMTDELKLKDLKV 70
F G +Y WS+ M F+ + + W +V + P + +V A K + E K K +
Sbjct: 14 FTGENYHIWSVKMQAFLEAYDLWEIVSEDKPVAPLPTNPTV---AQIKFSSEEKAKSINH 70
Query: 71 KNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
+N ++ ++I I ++AK+ W+ +K++++G+ R ++ Q+ L+R+FE L M+ E
Sbjct: 71 QN----SVAKSIFYRIMACNSAKKAWNKLKEEYQGSDRTRQMQVLNLKRDFEALNMQEDE 126
Query: 131 -----------------------EDVKIVEKILRTLTEKF 147
+ +IVEK+L TL ++F
Sbjct: 127 TISKYSDQISLIINNIRLLGEDFPNSRIVEKVLVTLPKRF 166
>gi|108710088|gb|ABF97883.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1441
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 32/165 (19%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G +Y W + M +++ + W +V+ G+ +G+ L + + L+L + +
Sbjct: 12 PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFT--ITGTPLTEIDHR---NLQL-NAQ 65
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
N LF ++ + D + +TA EIW+ + + EG ++ K ++L L+ ++ET M
Sbjct: 66 AMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSKYKDAKLHFLKIQYETFSMLPH 125
Query: 130 EE-----------------------DVKIVEKILRTLTEKFNDIV 151
E D+++ +K+LR L EK+ +V
Sbjct: 126 ESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLV 170
>gi|40644190|emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y +WS +M NF++ K+ WG V Y P + + D + + K+ ++
Sbjct: 20 NYSYWSYVMRNFLKGKKMWGYVSGTYVVPKNTE---EGDTVSIDTWEANNAKIITWINNY 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
++ +I + K +TAKE+WD +++ F + K+ QL+
Sbjct: 77 VEHSIGTQLAKYETAKEVWDHLQRLFTQSNFAKQYQLE 114
>gi|18652506|gb|AAL77140.1|AC097447_6 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|31430314|gb|AAP52245.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1283
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 38/159 (23%)
Query: 31 RSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKD 90
+++ WG VE G L+D Q D + + +A+ +L T+ K+
Sbjct: 163 KAQGLWGAVE------PEGDDLVDYRQ---------DRQALAAILRAVPAEMLATLAVKE 207
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------------- 130
TA+E W+A+K + G RV++ Q LRREF + K GE
Sbjct: 208 TAQEAWEAIKTRRIGVQRVREVNAQQLRREFGDILFKDGETVDDFSMRIGGLANNLRTLG 267
Query: 131 ---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+ ++V+K+L+ + E I SIE D++ +S E
Sbjct: 268 DNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNEVSLE 306
>gi|13435243|gb|AAK26118.1|AC084406_1 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1831
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 48/176 (27%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+M+M ++++ W V G Y E D + L
Sbjct: 515 NYAEWAMVMKVKLQARHMWDTVWYGDVDYGE---------------------DRRALEAL 553
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE--- 131
A+ + +I K T K+ WDA+ G+ R ++S LQ LR+++E L K GE+
Sbjct: 554 LAAVPTEMQSSIVNKRTTKDAWDAIASARIGSDRARRSTLQKLRQDWENLAFKPGEDIDD 613
Query: 132 ----------------DVKI-----VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D I VEK+LR + EK+ + SIE D L+ E
Sbjct: 614 FVLRLNSLQQRLAQLGDTTIDEERAVEKLLRVVPEKYTQLALSIETLLDFTELTIE 669
>gi|294462842|gb|ADE76963.1| unknown [Picea sitchensis]
Length = 113
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 16/112 (14%)
Query: 11 AIPRFVGH-YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLK- 66
IP+F GH YD W + M +++++ + W + GY PA T+E +K
Sbjct: 10 GIPQFDGHKYDFWIIGMKTYIQAQGFQVWQSIVDGYTTPAVPP---------TNEKAVKF 60
Query: 67 ---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
+ K N L + TI + + KEIWD ++ +EG+++VK ++LQ
Sbjct: 61 DENNFKAINALLNGLSDTIFTKVAHCKSDKEIWDKLRNIYEGDSKVKVAKLQ 112
>gi|224100601|ref|XP_002334357.1| predicted protein [Populus trichocarpa]
gi|222871820|gb|EEF08951.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M RS+ W +V+ GY+EP + S L +A +K + K KD + Q++ TI
Sbjct: 1 MKTLFRSQNLWDIVKNGYEEPENISTLEEAQRKELEVKKQKDASALYLIQQSLADTIFPR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNAR 108
I + TAK+ WD ++ +F G+++
Sbjct: 61 ITEASTAKQAWDILQNEFLGDSK 83
>gi|108710414|gb|ABF98209.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2311
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 48/176 (27%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG---YDEPASGSVLMDAHQKMTDELKLKDLKVKNYL 74
+Y W+M+M ++++ W V G Y E D + L
Sbjct: 865 NYAEWAMVMKVKLQARHMWDTVWYGDVDYGE---------------------DRRALEAL 903
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE--- 131
A+ + +I K T K+ WDA+ G+ R ++S LQ LR+++E L K GE+
Sbjct: 904 LAAVPTEMQSSIVNKRTTKDAWDAIASARIGSDRARRSTLQKLRQDWENLAFKPGEDIDD 963
Query: 132 ----------------DVKI-----VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D I VEK+LR + EK+ + SIE D L+ E
Sbjct: 964 FVLRLNSLQQRLAQLGDTTIDEERAVEKLLRVVPEKYTQLALSIETLLDFTELTIE 1019
>gi|13477077|dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1250
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 20/126 (15%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD 61
TS + S P + +Y+ W+M M ++ + W VE G ++ +
Sbjct: 16 TSSASISCPLLS--ATNYNVWTMRMRLLLKVHKVWDTVEPGSEDVDKNDI---------- 63
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
+ +FQ++ ++ I + +TAKE+W+++K K G RVK+++LQ L EF
Sbjct: 64 --------ARALIFQSVPESLTLQIGELETAKEVWESIKTKNVGAERVKEARLQTLMAEF 115
Query: 122 ETLEMK 127
E +MK
Sbjct: 116 ERAKMK 121
>gi|357460225|ref|XP_003600394.1| hypothetical protein MTR_3g060700 [Medicago truncatula]
gi|355489442|gb|AES70645.1| hypothetical protein MTR_3g060700 [Medicago truncatula]
Length = 1069
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 32/186 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M +F+ +E W ++E G D+ ++ H +L
Sbjct: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ + FEG+ +VK+++ L ++E
Sbjct: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCENFEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVKI-------VEKILRTLTEKFNDIVCSIEESKDI 160
MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEE 166
++LS E
Sbjct: 212 NTLSVE 217
>gi|357509661|ref|XP_003625119.1| Disease resistance protein [Medicago truncatula]
gi|355500134|gb|AES81337.1| Disease resistance protein [Medicago truncatula]
Length = 381
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 41/179 (22%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDE-PASGSVLMDAHQK 58
M +E +FS A P F G +YD W++ M++++ + + W VE + P + M A K
Sbjct: 210 METETSFSHVAPPVFDGENYDLWAVRMESYLEALDVWEAVEEDCEVLPLPNNPTM-AQLK 268
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
E K + K K+ L+ ++ + D +K+++ G+ R++ Q+ L
Sbjct: 269 YHKERKTRKAKAKSVLYSSVSQN---------------DYLKEEYAGDERIRGMQVLNLM 313
Query: 119 REFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSI 154
REFE +MK E D +IVEKIL T+ E++ + I
Sbjct: 314 REFEMQKMKESETIKDYSDRLLSTANKVRLLGTQFADSRIVEKILVTVPERYEASITVI 372
>gi|77555606|gb|ABA98402.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 505
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 1 MTSEGNFS-QPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAH 56
M + FS +P I F G + HW M +++ ++ Y W V Y P + +
Sbjct: 1 MATPARFSTKPHI--FDGTDFPHWCSKMQSYIMAENYDIWRKVSHPYMIPEAIN------ 52
Query: 57 QKMTDELKLK---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
TD LK + + K +N + I R+ D + +TA EIW+A+K +G +K+ +
Sbjct: 53 ---TDALKTEFENNCKARNIILSGISRSDYDRVAHLETAHEIWNALKNFHQGTNNIKELR 109
Query: 114 LQALRREFETLEMKSGE 130
++E+ EMKSGE
Sbjct: 110 RDLFKKEYIKFEMKSGE 126
>gi|297727551|ref|NP_001176139.1| Os10g0399500 [Oryza sativa Japonica Group]
gi|13940606|gb|AAK50408.1|AC021891_9 Putative retroelement [Oryza sativa Japonica Group]
gi|31431931|gb|AAP53637.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|255679383|dbj|BAH94867.1| Os10g0399500 [Oryza sativa Japonica Group]
Length = 308
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 43/198 (21%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS++M + + E W VE + + KD + + +A
Sbjct: 40 NYHEWSLVMQVSLEALEQWDAVEA------------------VSKDRGKDRRALATIIRA 81
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ R + + K +AKE WD +KK G+ RVK + +Q L ++FE + + GE
Sbjct: 82 VPREMKAGLAVKKSAKEAWDVVKKMHAGDDRVKATSVQRLMKQFENMAFRDGENVGDFAM 141
Query: 138 KI------LRTLTEKFND-----------------IVCSIEESKDIDSLSEEAEVKEDEV 174
+I LR L E+ D + +IE DID++ E V +V
Sbjct: 142 RINGLVASLRELGEEMEDSRVVKKVLRVVPKRLKQVAVAIEMLADIDTMEIEELVGRLQV 201
Query: 175 KTLLGAEEEEEAGKFAEH 192
A+ E++A AEH
Sbjct: 202 AE--DADAEDQAASSAEH 217
>gi|147865764|emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
Length = 1021
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 30/33 (90%)
Query: 132 DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
DV +VEKILR++T KF+ +VCSIEESKDID+L+
Sbjct: 30 DVAVVEKILRSMTPKFDYVVCSIEESKDIDTLT 62
>gi|147770778|emb|CAN60957.1| hypothetical protein VITISV_034687 [Vitis vinifera]
Length = 230
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-- 131
+F AI I + KE WD ++ EG VK S+LQ L FET++M+ E
Sbjct: 4 IFNAISMDEFLKIATCTSNKEAWDILQLTHEGTNAVKVSKLQMLTFRFETIKMEYHENFG 63
Query: 132 ---------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR L E+F V +IE+SKD+DSL
Sbjct: 64 EFYAKLMDMVSSSFNLGEPIPNSKMVRKILRFLFERFRAKVTAIEDSKDVDSL 116
>gi|147770281|emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera]
Length = 1652
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------------- 130
+AKE WD ++ EG K S+ Q L FET+ M E
Sbjct: 21 SAKEAWDILQVTHEGTNVTKVSKFQMLTSRFETIRMDDHETFGECHAKLMDIVNSSFNLS 80
Query: 131 ---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+L +F V +I+ESKD+DSL
Sbjct: 81 EPISNSKVVRKILRSLPNRFRAKVTAIKESKDMDSL 116
>gi|224103035|ref|XP_002334097.1| predicted protein [Populus trichocarpa]
gi|222869539|gb|EEF06670.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 10 PA-IPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKD 67
PA P F G ++ W++ M+ ++++ + W +VE+ G+ L AH K +E K K
Sbjct: 7 PAKTPVFTGQNFGVWTVKMETYLKAFDLWEIVESDKPPTPLGNNLTIAHMKFFNEEKAKR 66
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKK 111
K L A+ I I +AKE WD +K +F G+ + K
Sbjct: 67 FKALTCLHNAVSEDIFTRIMACKSAKETWDKLKAEFHGDEKSMK 110
>gi|224118228|ref|XP_002317765.1| predicted protein [Populus trichocarpa]
gi|222858438|gb|EEE95985.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 5 GNFSQPA-IPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
NF PA P F G ++ W++ M+ ++++ + W +VE+ G+ L AH K +E
Sbjct: 4 ANF--PAKTPVFTGQNFGVWTVKMETYLKAFDLWEIVESDKPPTPLGNNLTIAHMKFFNE 61
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKK 111
K K K L A+ I I +AKE WD +K +F G+ + K
Sbjct: 62 EKAKRFKALTCLHNAVSEDIFTRIMACKSAKETWDKLKAEFHGDEKSMK 110
>gi|147845566|emb|CAN78487.1| hypothetical protein VITISV_004930 [Vitis vinifera]
Length = 971
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 32/193 (16%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMT 60
NF++ P F G +Y +W M +++S + W ++E G P +L+ ++
Sbjct: 12 NFTKHRAPFFTGTNYPYWKTRMTWYLQSTDLDVWDVIEDGPTFPTKLVDGILVPKPKQEW 71
Query: 61 DELKLK----DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL + + KV L A+DR + I + +AKEIW ++ E +VK+S++
Sbjct: 72 NELDRRIFQLNAKVAFTLQCAMDRNEYNIICQCKSAKEIWRLLEITHEETNQVKESKINL 131
Query: 117 LRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCS 153
L +E +K E V++ V KILR L K++ V +
Sbjct: 132 LIHNYELFLIKENETIVEMITRFTNIVNGLEALGKTYKESEKVMKILRLLPSKWHTKVTT 191
Query: 154 IEESKDIDSLSEE 166
I+E+KD+ L E
Sbjct: 192 IQEAKDLTKLPIE 204
>gi|297726763|ref|NP_001175745.1| Os09g0272800 [Oryza sativa Japonica Group]
gi|255678729|dbj|BAH94473.1| Os09g0272800 [Oryza sativa Japonica Group]
Length = 707
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 25/151 (16%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLK---DLKVKNY 73
+ HW M +++ ++ Y W V Y P + + TD LK + + K +N
Sbjct: 19 FPHWCCKMQSYIMAENYDIWRKVSLPYVIPEAIN---------TDALKTEFENNCKARNI 69
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
L I R+ D + +TA EIW+A+K +G +K+ + ++E+ E+KSGE
Sbjct: 70 LLSGISRSDYDRVAHLETAHEIWNALKNFHQGTNNIKELRRDLFKKEYIKFEVKSGEA-- 127
Query: 134 KIVEKILRTLTEKFNDIVC---SIEESKDID 161
L +FN I+ S++ S D++
Sbjct: 128 ------LDDYLSRFNKILSDLRSVDSSYDVN 152
>gi|359324444|gb|EHK62701.1| hypothetical protein M3S_E12 [Sorghum bicolor]
Length = 260
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 42/173 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS+ + + + W LVE+ E + D L L + +
Sbjct: 6 NYQEWSVHVQCNLEAMYLWDLVESNKVE------------RRHDRLAL------GAMLRG 47
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ + + K +AKE W A+K G RVK+ Q L EFE + KSGE
Sbjct: 48 VPPELHSMLLNKKSAKEAWAAIKSMRLGADRVKEVNAQKLLAEFEAITFKSGETIEDFAV 107
Query: 131 -----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+D ++V+K LR + +K+N + +IE D+ +LS E
Sbjct: 108 RIEKIATNLKGLGETSVDDARVVKKFLRVVPQKYNQVAMTIEMFCDLKNLSVE 160
>gi|147835334|emb|CAN61121.1| hypothetical protein VITISV_028334 [Vitis vinifera]
Length = 568
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 43/170 (25%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W + M +++ + W VE Y+ P G+ A K+ E + + K K LF A
Sbjct: 17 NYETWVVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+K++++G+ +K Q+ L REFE + +
Sbjct: 77 Y--------------------LKEEYKGDEIIKNMQVMNLIREFEMKKXRESDAVKDYAA 116
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 117 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEAXISSLENSKDLSTIS 166
>gi|357140665|ref|XP_003571884.1| PREDICTED: uncharacterized protein LOC100827996 [Brachypodium
distachyon]
Length = 348
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKD-LKVKNYLF 75
+ W M ++ ++ Y W V Y+ PA G++ T+ + +++ K +NY+
Sbjct: 16 FQFWKAKMKAYIMAQSYAIWEKVAKPYELPADGAI------TPTNLVHVENNYKARNYII 69
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---ED 132
Q + R+ D + +A E+W+A+ EG+ VK+ + ++E+ EM +GE E
Sbjct: 70 QGLQRSDFDRVAHLASAHEVWNALCSYHEGSNSVKEVRRDMYKKEYMRFEMNAGESLDEF 129
Query: 133 VKIVEKILRTL 143
KIL TL
Sbjct: 130 FARFNKILSTL 140
>gi|147836974|emb|CAN61559.1| hypothetical protein VITISV_022170 [Vitis vinifera]
Length = 246
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MTSE + + A F G +Y ++ M+ ++ + W V Y+ P A K+
Sbjct: 1 MTSEASLNALAPXVFDGINYQVXAVCMEAYLDXSDLWEAVSEEYEVPPLSDNPTMAXIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+E + + K K LF + TI I T EIW+ +KK++EGN VK + +
Sbjct: 61 HNERRQRKSKAKASLFXXVSSTIFTRIMTLKTKNEIWNFLKKEYEGNEXVKGHVERICKS 120
Query: 120 EFETLEMKSGEEDVK 134
+ + E+K+ E+++
Sbjct: 121 QQQLGEVKAAVEELQ 135
>gi|147866009|emb|CAN80972.1| hypothetical protein VITISV_043375 [Vitis vinifera]
Length = 164
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+F AI I + E WD ++ EG VK S+LQ L FET+ M E
Sbjct: 4 IFNAISTYEFRRIGTCTSTMEAWDILQVTHEGTNAVKVSKLQMLTSRFETIRMDDHETFG 63
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V KILR+ E+F V +IEESKD+DSL
Sbjct: 64 EFHAKLMDIVNSSFNLGEPISNSKVVRKILRSRPERFRAKVTAIEESKDVDSL 116
>gi|31432007|gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1419
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 1 MTSEGNFS-QPAIPRFVGH-YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAH 56
M + FS +P I F G + HW M +++ ++ Y W V Y P + +
Sbjct: 1 MATPARFSTKPHI--FDGTDFPHWCSKMQSYIMAENYDIWRKVSHPYVIPEAIN------ 52
Query: 57 QKMTDELKLK---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
TD LK + + K +N L I R+ D + +TA EIW+A+K +G +K+ +
Sbjct: 53 ---TDALKTEFENNCKARNILSSGISRSDYDRVAHLETAHEIWNALKNFHQGTKNIKELR 109
Query: 114 LQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
++E+ EMKSGE L +FN I+ + + +DS S +A + E
Sbjct: 110 RDLFKKEYIKFEMKSGEA--------LDDYLSRFNKILSDL---RSVDS-SYDANYPQSE 157
Query: 174 V 174
+
Sbjct: 158 I 158
>gi|72255634|gb|AAZ66952.1| 117M18_33 [Brassica rapa]
Length = 681
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 46/175 (26%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETG--YDEPASGSVLMDAHQKMTDELKLKDLKVKNYLF 75
+Y W+M M ++ + W +E G ++E + ++ + +F
Sbjct: 29 NYTVWAMRMKVALKVNKVWETIEPGSKHEEKNNMAIAL--------------------MF 68
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE----- 130
Q+I + + + AK +WDA+K + G RV++++LQ L EF+ L+MK +
Sbjct: 69 QSIPEALTLQVGDLEDAKAVWDAIKTRHVGAERVREARLQTLMAEFDRLKMKEADTIDYF 128
Query: 131 ------------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDIDSLSEE 166
E+ K+V+K L++L +K+ +V S+E+ D++S S E
Sbjct: 129 VGKLSEISAKSASLGEIIEEPKLVKKFLKSLPRKKYIHMVASLEQVLDLNSTSFE 183
>gi|147840286|emb|CAN63989.1| hypothetical protein VITISV_016157 [Vitis vinifera]
Length = 550
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 42/170 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + +VE Y+ G+ A K+ E + + K K LF A
Sbjct: 17 NYETWAVRMTVHLQALDVREVVEENYEVSPLGANPTMAQMKLHKERRTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS--------- 128
+ +K++++G+ R+K Q+ L REFE +M+
Sbjct: 77 -------------------EYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 117
Query: 129 ------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G+E + KIV+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 118 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTIS 167
>gi|357517663|ref|XP_003629120.1| Serine/threonine protein kinase SRPK1 [Medicago truncatula]
gi|355523142|gb|AET03596.1| Serine/threonine protein kinase SRPK1 [Medicago truncatula]
Length = 1025
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 32/186 (17%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M +F+ +E W ++E G D+ ++ H +L
Sbjct: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKL 91
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K T K ++ ++ FEG+ +VK+++ L ++E
Sbjct: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTTKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
Query: 124 LEMK----------------SGEEDVKI-------VEKILRTLTEKFNDIVCSIEESKDI 160
MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
Query: 161 DSLSEE 166
++LS E
Sbjct: 212 NTLSVE 217
>gi|13937301|gb|AAK50132.1|AC087797_17 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1700
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L EK+ V
Sbjct: 114 KIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETFV 170
>gi|108710679|gb|ABF98474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1753
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L EK+ V
Sbjct: 114 KIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETFV 170
>gi|125597915|gb|EAZ37695.1| hypothetical protein OsJ_22037 [Oryza sativa Japonica Group]
Length = 346
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--- 130
+ +++ +L T+R K +A+ WD +K G RV++S+ Q LRREF L K GE
Sbjct: 37 ILRSVPSEMLPTLRGKRSARAAWDVIKTIRVGVERVRESKAQQLRREFAALTWKEGETAE 96
Query: 131 --------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAE 168
D +V K+L + E I ++E D++++S E E
Sbjct: 97 DFSVRITGLANNLRTLGDNISDADVVRKMLDVVPEHLEQIAIAVETLLDLNTVSVEEE 154
>gi|58532039|emb|CAE05092.3| OSJNBa0009K15.12 [Oryza sativa Japonica Group]
Length = 622
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQK 58
M++E N A+ +Y W + M +++ + W +V+ G+ +G+ L + +
Sbjct: 1 MSNEVNHVGKALMFNGTNYSIWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDHR 58
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
L+L + + N LF ++ + D +R +T EIW+ + + EG + K ++L L+
Sbjct: 59 ---NLQL-NTQAMNALFNSLSQEEFDRVRNLETTYEIWNKLAEIHEGTSEYKDAKLHFLK 114
Query: 119 REFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
++ET M E D+++ +K+LR L EK+ ++
Sbjct: 115 IQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLI 170
>gi|158578614|gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]
Length = 551
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 45/210 (21%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+M M ++ + W +E S+ +D K++ LFQ+
Sbjct: 27 NYTVWAMRMKIMLQIHKVWETIE-------GNSMDID-----------KNVIAIGLLFQS 68
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK--------SG 129
I +++ + D++K IW+A+K + G RVK+++LQ L EFE L M SG
Sbjct: 69 IPESLILQVGGLDSSKAIWEAIKTRHLGAERVKEARLQTLTYEFERLRMNDSDSIDAFSG 128
Query: 130 E---------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDIDSLSEE---AEVK 170
+ E+ K+V+K L +L +K+ I+ S+E+ +++ E +K
Sbjct: 129 KLSELASKSAALGEVIEEPKLVKKFLNSLPRKKYIHIIASLEQVLNLNETGFEDIVGRLK 188
Query: 171 EDEVKTLLGAEEEEEAGKFAEHWTTSRKGS 200
E + L +++E GK + +GS
Sbjct: 189 AYEERVLDDEKQDETQGKLLFTESNGYQGS 218
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 36/138 (26%)
Query: 84 DTIRKKDTA---------KEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS------ 128
D + KK +A E W+ +K++++G+ R KK ++ LRR FE L+MK
Sbjct: 627 DEVEKKGSALAIIHAALHDEAWNKLKEEYQGSERTKKMKVLNLRRVFEALKMKESVREFS 686
Query: 129 -------------GEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
GE+ D ++VEKIL L+E F + S+EE+K+ +E+ E
Sbjct: 687 DRISKVVTQIRLLGEDLSDQRVVEKILVCLSEMFEAKISSLEENKNF------SEITVAE 740
Query: 174 VKTLLGAEEEEEAGKFAE 191
+ L A E+ + + E
Sbjct: 741 LVNALQASEQRRSLRMKE 758
>gi|147807601|emb|CAN75483.1| hypothetical protein VITISV_042793 [Vitis vinifera]
Length = 917
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 46 PASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEG 105
P ++ M A K + K K K K YL+ + TI I +AK IWD +K ++EG
Sbjct: 23 PLPNNLTM-AQIKHHKQRKTKKSKAKVYLYAVVSSTIFTRIMSLRSAKAIWDHLKTEYEG 81
Query: 106 NARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+ R++ Q ++VEKIL T+ E+F + ++E +KD+ ++
Sbjct: 82 DERIRGMQ-------------------SRMVEKILVTVPERFEASITTLENTKDLSMIT 121
>gi|359496392|ref|XP_003635225.1| PREDICTED: uncharacterized protein LOC100855279 [Vitis vinifera]
Length = 324
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
K+ E + + K K LF A+ +I I K D+A EIW+ +K++++G+ R+K Q+ L
Sbjct: 2 KLHKERRTRKAKAKACLFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNL 61
Query: 118 RREFETLEMK 127
REFE +M+
Sbjct: 62 IREFEMKKMR 71
>gi|224089517|ref|XP_002308742.1| predicted protein [Populus trichocarpa]
gi|222854718|gb|EEE92265.1| predicted protein [Populus trichocarpa]
Length = 117
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 22/91 (24%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
LF A+ +I I T EIW+ +KK++EG RVK
Sbjct: 18 LFAAVSSSIFTRIMTLKTTNEIWNFLKKEYEGIERVKGI--------------------- 56
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
IV+KIL T+ EKF + SIE SKD+ S++
Sbjct: 57 -IVQKILVTVPEKFEATISSIENSKDVSSIT 86
>gi|242067845|ref|XP_002449199.1| hypothetical protein SORBIDRAFT_05g006355 [Sorghum bicolor]
gi|241935042|gb|EES08187.1| hypothetical protein SORBIDRAFT_05g006355 [Sorghum bicolor]
Length = 298
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+L Q I +L + K T KE+WD +K +F G RV+ ++LQ L+ +F+ L MK
Sbjct: 72 HLLQCIPDDLLMQVAGKKTGKEVWDTLKARFVGEERVRDARLQTLKSDFDALRMK 126
>gi|18657016|gb|AAL78103.1|AC093568_13 Putative polyprotein [Oryza sativa]
gi|31430580|gb|AAP52474.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 669
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 1 MTSEGNFS-QPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAH 56
M + FS +P + F G + HW M +++ +++Y W V Y P V+ A
Sbjct: 1 MATPARFSTKPHV--FNGTDFSHWCSRMQSYIMAEDYDIWRKVSHAYVIP---EVINTAA 55
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+K E ++ K +N L I R+ D + +TA EIW+A+K +G +K+ +
Sbjct: 56 EKTAFE---QNCKARNILLSGISRSDYDRVPHLETAHEIWNALKNFHQGTNNIKELRRDL 112
Query: 117 LRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDID 161
++E+ EMK E L +FN I+ S++ S D++
Sbjct: 113 FKKEYIKFEMKYREA--------LDDYLSRFNKILSDLRSVDSSYDVN 152
>gi|108862392|gb|ABA97191.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 926
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 1 MTSEGNFS-QPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAH 56
M + FS +P I F G + HW M +++ ++ Y W V Y P + +
Sbjct: 1 MATPARFSTKPHI--FDGTDFPHWCSKMQSYIMAENYDIWRKVSHPYVIPEAIN------ 52
Query: 57 QKMTDELKL---KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
TD LK + K +N L I R+ D + +TA EIW+A+K +G +K+
Sbjct: 53 ---TDALKTEFENNCKARNILLSGISRSDYDRVAHLETAHEIWNALKNFHQGTNNIKELS 109
Query: 114 LQALRREFETLEMKSGE 130
++E+ EMK GE
Sbjct: 110 QDLFKKEYIKFEMKPGE 126
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 10/84 (11%)
Query: 104 EGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
EG ++VK S+LQ L +FE L+MK EE K+V KILR+L ++F+ V +IEE++DI ++
Sbjct: 98 EGTSKVKMSRLQLLATKFENLKMKE-EEYEKLVRKILRSLPKRFDMKVTAIEEAQDICNM 156
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAG 187
V L+G+ + E G
Sbjct: 157 ---------RVDELIGSLQTFELG 171
>gi|29893613|gb|AAP06867.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108707413|gb|ABF95208.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 307
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 45/215 (20%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M + P + R +Y WS++M M + E W VE
Sbjct: 25 MANSSAVELPLLTRT--NYHEWSLVMQVSMEALEQWDAVEA------------------V 64
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
+ + KD + + A+ R + + K +AKE WDA+KK G+ R+K + +Q L ++
Sbjct: 65 SKDRGKDRRALAMIICAVPREMKAGLAVKKSAKEAWDAVKKMHAGDDRMKAASVQRLMKQ 124
Query: 121 FETLEMKSGEEDVKIVEKI------LRTLTEKFND-----------------IVCSIEES 157
E + + GE +I LR L E+ D + +IE
Sbjct: 125 VENMTFRDGENVGDFAMRINGLVASLRELGEEMEDSRVVKKVLRVVPKRLKQVAVAIEML 184
Query: 158 KDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEH 192
DID++ E V +V A+ E++A AEH
Sbjct: 185 ADIDTMKIEELVGRLQVAE--DADAEDQAASSAEH 217
>gi|77554011|gb|ABA96807.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1196
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRF-VGHYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNCTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFSMLPHESVNDMYGRLNIIVNDLKGLGANYTDLEVAQKMLRALLEKYETLV 170
>gi|357449861|ref|XP_003595207.1| Nucleosome assembly protein 1-like protein [Medicago truncatula]
gi|355484255|gb|AES65458.1| Nucleosome assembly protein 1-like protein [Medicago truncatula]
Length = 988
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
DEL L K N LF +D+ + I K++W+ +K EG A+V S+LQ L
Sbjct: 555 DELSLGTSKALNALFNGVDKNMFRLINTCIVTKDVWEILKTTHEGTAKVCMSRLQLLTTN 614
Query: 121 FETLEMKSGEE---------DV--------------KIVEKILRTLTEKFN 148
FE L M E D+ K+V KILR+L +K++
Sbjct: 615 FENLRMNYDETIHNFHMSILDIVNTSRALGETMLKEKLVRKILRSLLKKYD 665
>gi|77551553|gb|ABA94350.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1449
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 38/154 (24%)
Query: 36 WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI 95
WG VE G L+D Q D + + +A+ +L T+ K+TA+E
Sbjct: 147 WGAVE------PEGDDLVDYRQ---------DRQALAAILRAVPAEMLATLAVKETAQEA 191
Query: 96 WDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-----------------------ED 132
W+A+K + G V+++ Q LRREF + + GE +
Sbjct: 192 WEAIKTRRIGVQCVREANAQQLRREFGDILFEDGETVDNFSMRIGGLANNLRTLGDNITE 251
Query: 133 VKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
++V+K+L+ + E I SIE D++ LS E
Sbjct: 252 AEVVQKLLQVVPEHLQQIAISIETLLDVNELSLE 285
>gi|147865953|emb|CAN78840.1| hypothetical protein VITISV_036972 [Vitis vinifera]
Length = 266
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 102 KFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
K+EGN RVK+S +QAL +EFETLEMK GE +++ + + ESKDID
Sbjct: 89 KYEGNERVKRSIIQALHKEFETLEMKFGEGVSDYFSRVMFVANKM------RVHESKDID 142
Query: 162 SLS 164
LS
Sbjct: 143 LLS 145
>gi|4914361|gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1307
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 25/127 (19%)
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRR 119
+D+++ D+ + LFQ++ + + + K T+K +W+A+K + G RVK+++LQ L
Sbjct: 18 SDDMEKNDM-ARALLFQSVPESTILQVGKHKTSKAMWEAIKTRNLGAERVKEAKLQTLMA 76
Query: 120 EFETLEMKSGE-----------------------EDVKIVEKILRTLT-EKFNDIVCSIE 155
EF+ L MK E E+ KIV+K L++L +K+ I+ ++E
Sbjct: 77 EFDRLNMKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALE 136
Query: 156 ESKDIDS 162
+ D+++
Sbjct: 137 QILDLNT 143
>gi|22213212|gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1584
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PIFNGTNYSTWKIKMSTHLKAMSFHIWSIVYVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFYMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLV 170
>gi|357489175|ref|XP_003614875.1| hypothetical protein MTR_5g060670 [Medicago truncatula]
gi|355516210|gb|AES97833.1| hypothetical protein MTR_5g060670 [Medicago truncatula]
Length = 553
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 32/189 (16%)
Query: 13 PRFVG---HYDHWSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDEL 63
P+F G + W M +++ E W ++E G D+ ++ H +L
Sbjct: 29 PKFNGDPEEFSWWKTNMYSYIMGLDDELWDILEDGVDDLDLDEEGTAIDRKIHTPAQKKL 88
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K K++ + +I RT + K TAK ++ ++ +EG+ +VK++++ L ++E
Sbjct: 89 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANYEGSKKVKEAKVLMLVHQYEL 148
Query: 124 LEMK----------------SGEEDVKI-------VEKILRTLTEKFNDIVCSIEESKDI 160
+MK SG + +K V KILR+L ++ V +IEE+KD+
Sbjct: 149 FKMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 208
Query: 161 DSLSEEAEV 169
++LS E V
Sbjct: 209 NTLSVEYLV 217
>gi|449449701|ref|XP_004142603.1| PREDICTED: lysosomal beta glucosidase-like [Cucumis sativus]
Length = 725
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 23/96 (23%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK----------------------- 127
TAK+ W A+K FEG ++VK S+L L +FE+L M
Sbjct: 484 TAKDAWKALKVAFEGTSKVKISRLLLLTSKFESLRMMEEETISEYNSRVLEIANDSFNFD 543
Query: 128 SGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
G + ++V K+LR L +F+ V ++EE++DI +L
Sbjct: 544 EGIPESRLVRKVLRLLPRRFDMKVTAMEEAQDITTL 579
>gi|147832378|emb|CAN71117.1| hypothetical protein VITISV_040940 [Vitis vinifera]
Length = 227
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 16/87 (18%)
Query: 132 DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEE-------- 183
DV IV KIL++L++KFN IVCSIEESKDI+ LS DE+++ L E+
Sbjct: 30 DVTIVGKILQSLSDKFNYIVCSIEESKDINLLS------IDELQSSLIVHEQKFHRHKRK 83
Query: 184 EEAGKFAEHWTTSRKG--SSNCHSTWK 208
E+A K + +R+G + C+ + K
Sbjct: 84 EQALKVIHEESVARRGRDTVKCYKSHK 110
>gi|110289188|gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2112
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PIFNGTNYSTWKIKMSTHLKAMSFHIWSIVYVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFYMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLV 170
>gi|108708879|gb|ABF96674.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1136
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 29/161 (18%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++LM ++++ W V EP V+ H+ D + L + + A
Sbjct: 53 NYNDWALLMKIKLQARNLWAAV-----EPDGMEVVF--HE---DRMAL------DAICSA 96
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ ++ T+ K +A+ D +K GN R++K+ Q +R E+E L ++ +E V+
Sbjct: 97 VPPEMIGTLATKASARAACDCIKTMRVGNDRIRKASAQKVRAEYEWLAFRA-DETVEDFA 155
Query: 138 KILRTLTE------------KFNDIVCSIEESKDIDSLSEE 166
L T+T +FN +V SIE DI +LS E
Sbjct: 156 LCLTTITNQLATLAILSPQTRFNQLVLSIETLLDISTLSLE 196
>gi|147770822|emb|CAN76426.1| hypothetical protein VITISV_023563 [Vitis vinifera]
Length = 327
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 23/133 (17%)
Query: 55 AHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL 114
A K E K K K LF + I I +AK IWD +K K+EG+ R++ Q+
Sbjct: 2 AQIKHHKERKTNKSKAKACLFPVVSSIIFTCIMSLRSAKMIWDYLKTKYEGDERIRGMQV 61
Query: 115 QALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIV 151
L +FE +MK E + +IVEKIL + ++F +
Sbjct: 62 LNLIWDFELQKMKETESIKGYSNRLLDIANRVRLLGSSLPNSRIVEKILVMMLKRFEASI 121
Query: 152 CSIEESKDIDSLS 164
++E +KD+ ++
Sbjct: 122 IALENTKDLSMIT 134
>gi|57834010|emb|CAI44607.1| P0650D04.11 [Oryza sativa Japonica Group]
Length = 347
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 36/181 (19%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE GY VL + K +E + K+
Sbjct: 37 PYFNGKDYAAWKHKMKMHLKSINPSIWRIVEKGY-------VLQNPEDPTKEDNENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ R+ + + ++AK IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANAILSALSRSEFNRVDGIESAKVIWDTLRNLHEGTDSVRESKVEILKGQFERFVML 149
Query: 128 SGE------------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE D +V+K++R +T + + +V I E D +L
Sbjct: 150 DGEIPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTL 209
Query: 164 S 164
+
Sbjct: 210 T 210
>gi|242093452|ref|XP_002437216.1| hypothetical protein SORBIDRAFT_10g023023 [Sorghum bicolor]
gi|241915439|gb|EER88583.1| hypothetical protein SORBIDRAFT_10g023023 [Sorghum bicolor]
Length = 1308
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 46/206 (22%)
Query: 5 GNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELK 64
G+ S P + R +Y W+ M +R++++W +E D +
Sbjct: 35 GSGSWPMLTR--TNYGEWATQMKWKLRARKWWRAIEE------------------DDRTE 74
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+ V L + + + KDTAK+ W+ ++ G+ R K++++Q LRRE
Sbjct: 75 DAQVGVMEALMASTPAEYHEALGAKDTAKQAWEMLESLRIGSDRAKRARIQQLRRELNDS 134
Query: 125 EMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDID 161
+ K GE +D +V K+L T+ +++ + SIE DI
Sbjct: 135 KFKPGESVEDFTLRLQSLATQLATYRKKVDDEDLVTKLLCTVPARYSQLAMSIETMLDIS 194
Query: 162 SLSEE---AEVKEDEVKTLLGAEEEE 184
+LS E ++ E +T E+E+
Sbjct: 195 TLSLEDVAGRLRVAESRTTPAPEKEK 220
>gi|15451594|gb|AAK98718.1|AC090483_8 Putative retroelement [Oryza sativa Japonica Group]
Length = 1660
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 6 NFSQPAIPRFVG--------------------HYDHWSMLMDNFMRSKEY--WGLVETGY 43
NF Q AI RF G + HW M +++ +++Y W V Y
Sbjct: 130 NFGQTAIHRFRGVFAMATPARFSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHSY 189
Query: 44 DEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKF 103
P + + A +K E ++ K N L I R+ D + TA EIW A+
Sbjct: 190 VIPEA---INTAAEKTAFE---QNCKSHNILLSGISRSDYDRVAHLQTAHEIWTALSNFH 243
Query: 104 EGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDI 160
+G +K+ + ++E+ EMK GE L +FN I+ SI+ S D
Sbjct: 244 QGTNNIKELRRDLFKKEYIKFEMKPGEA--------LDDYLSRFNKILSDLRSIDSSYDT 295
Query: 161 D 161
+
Sbjct: 296 N 296
>gi|22725980|gb|AAN04980.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31430638|gb|AAP52526.1| hypothetical protein LOC_Os10g11080 [Oryza sativa Japonica Group]
gi|62733431|gb|AAX95548.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 439
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 37/186 (19%)
Query: 8 SQPAIPRFVGHYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKL 65
S+P I V +D+W M++++ S+ Y W V Y+ P + QK E
Sbjct: 7 SKPHIYNGV-DFDYWKKKMESYITSQGYDVWMKVARVYEIPERIETIA---QKTDFE--- 59
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+ K +N L I ++ D + +TA EIW A+ G+ +K+ Q ++++ E
Sbjct: 60 NNCKAQNILLSGISQSNFDRVSHLETANEIWKALNNFHTGSTNIKELQKDVFKKDYIKFE 119
Query: 126 MKSGE-------------EDVKIVE----------KILRTLTEKFNDIVC-----SIEES 157
M SGE D++ V+ +I R F+ IVC SI+ES
Sbjct: 120 MSSGESLDDYLGRFNKILSDLRSVDDSCDVNYSQSEIARHFMNGFDMIVCDVKVTSIQES 179
Query: 158 KDIDSL 163
D+++L
Sbjct: 180 VDMNTL 185
>gi|108862673|gb|ABA98230.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1463
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 30/181 (16%)
Query: 1 MTSEGNFS-QPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAH 56
M + FS +P I F G + HW M +++ ++ Y W V Y P + +
Sbjct: 1 MATPARFSTKPHI--FDGTDFPHWCSKMQSYIMAENYDIWRKVSHPYVIPEAIN------ 52
Query: 57 QKMTDELKLK---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
TD LK + + K +N L I R+ + +TA EIW+A+K +G +K+ +
Sbjct: 53 ---TDALKTEFENNCKARNILLSGISRSDYVRVAHLETAHEIWNALKNFHQGTNNIKELR 109
Query: 114 LQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE 173
++E+ EMKSGE L +FN I+ + + +DS S +A + E
Sbjct: 110 RDLFKKEYIKFEMKSGEA--------LDDYLSRFNKILSDL---RSVDS-SYDANYPQSE 157
Query: 174 V 174
+
Sbjct: 158 I 158
>gi|224154931|ref|XP_002337540.1| predicted protein [Populus trichocarpa]
gi|222839535|gb|EEE77872.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 27/159 (16%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAI 78
YD W ++ + ++S++ + + DE + ++ + E K+K+ KV + + A+
Sbjct: 8 YDLWDVV-EAGVQSQQTLEVAQGSGDERSEAEQILGEAPTTSRENKIKNAKVPSLIQGAL 66
Query: 79 DRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL-------------- 124
+ IR + TAK W+ ++++F G+ +V +LQA+R +FE +
Sbjct: 67 TDELFPHIRNEKTAKGAWNVLRREFRGDKKVIAVKLQAIRADFEYMIMIDNESLDSYLAK 126
Query: 125 ------EMKSGEEDV---KIVEKILRTLTEKFNDIVCSI 154
MKS EDV +IV+K+L +L E +++ S+
Sbjct: 127 FFGTVNNMKSLGEDVTERRIVQKLLMSLIE---EVIASV 162
>gi|57834062|emb|CAD40308.2| OSJNBb0013O03.3 [Oryza sativa Japonica Group]
Length = 1162
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K+ E ++ K +N L
Sbjct: 19 FYHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTAAEKIAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW+A+ +G +KK + + E+ EMK GE
Sbjct: 73 GISRSDYDRVAHFRTAHEIWNALSNFHQGTNNIKKLRRDIFKNEYIKFEMKPGE 126
>gi|224113705|ref|XP_002332516.1| predicted protein [Populus trichocarpa]
gi|222832622|gb|EEE71099.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M E NFS A P F G +Y W++ M ++ + W V+ Y+ PA + A K
Sbjct: 1 MEVEANFSSIASPVFNGDNYQTWAVRMKTYLDVLDIWEAVKENYEIPALPNNPTMAQIKA 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWD 97
E K K K L A+ TI I + KEIWD
Sbjct: 61 HKEKNTKKSKAKACLLAAVSSTIFTRIMSLKSGKEIWD 98
>gi|24421684|gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
Group]
gi|108706958|gb|ABF94753.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2011
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ LKL + + N LF ++ + D + +TA EIW+ + + E + K ++L L
Sbjct: 58 R---NLKL-NAQAMNVLFNSLSQEEFDRVSNLETAYEIWNKLAEIHESTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E ++++ +K+LR L EK+ +V
Sbjct: 114 KIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETLV 170
>gi|77555056|gb|ABA97852.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 412
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + +++ + W +V+ G+ +G+ LM+
Sbjct: 1 MSNEMNHVGKA-PMFNGTNYSTWKIKNSTHLKTMSFHIWSIVDVGF--AITGTPLMEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
++ L+L + + N LF ++ + D + +TA EIW+ + + EG + K +L L
Sbjct: 58 RI---LQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDVKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
+ ++ET M E D+++ +K+LR EK+ +V
Sbjct: 114 KIQYETFTMLPHESVNDMYGRLNVIGNDLKGLGATYTDLEVAQKMLRAPPEKYETLV 170
>gi|38345988|emb|CAD39978.2| OSJNBa0032B23.6 [Oryza sativa Japonica Group]
Length = 1149
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++LM ++++ W VE G ++ H+ D++ L + ++ A
Sbjct: 60 NYNDWALLMKIKLQARCLWDAVE-------RGRAAVELHE---DQMAL------DAIYSA 103
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ ++ + K +AKE WD +K G+ R++K+ Q +R E+E + + GE VE
Sbjct: 104 VPPEMISILATKASAKEAWDCIKTMRVGDNRIRKASAQRVRTEYERIAFRDGES----VE 159
Query: 138 KILRTLTEKFNDI 150
+ LT N +
Sbjct: 160 EFAMWLTSVVNQL 172
>gi|77549325|gb|ABA92122.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 685
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 37/146 (25%)
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------- 130
+R + + +WDA++ R +KS LQALR+E+E L K GE
Sbjct: 136 MRVRLQVRHMWDAVRD------RARKSTLQALRKEWENLAFKPGEDVDDLQKMVQYGDDT 189
Query: 131 -EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKF 189
++ + VEK+ R + EK+ I SIE D+ ++S E + +K + G E + +G
Sbjct: 190 YDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSIEEAL--GRLKVVDGDEPQPLSGPI 247
Query: 190 A---------EHWTTS----RKGSSN 202
E W S RKG S+
Sbjct: 248 TIGGKLHLTQEQWEASQGDGRKGESS 273
>gi|20042890|gb|AAM08718.1|AC116601_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1627
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 35/178 (19%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTE--- 54
Query: 58 KMTDELKLK-DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
D L+ + + N LF + + D + +TA EIW+ + + EG + K ++L
Sbjct: 55 --IDHCNLQLNAQAMNALFNSFSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHF 112
Query: 117 LRREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
L+ ++ET M E D+++ +K+LR L +K+ +V
Sbjct: 113 LKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGATYTDLEVAQKMLRALPKKYETLV 170
>gi|110288554|gb|ABB46643.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1604
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 35/178 (19%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTE--- 54
Query: 58 KMTDELKLK-DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
D L+ + + N LF + + D + +TA EIW+ + + EG + K ++L
Sbjct: 55 --IDHCNLQLNAQAMNALFNSFSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHF 112
Query: 117 LRREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIV 151
L+ ++ET M E D+++ +K+LR L +K+ +V
Sbjct: 113 LKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGATYTDLEVAQKMLRALPKKYETLV 170
>gi|297726133|ref|NP_001175430.1| Os08g0201900 [Oryza sativa Japonica Group]
gi|255678224|dbj|BAH94158.1| Os08g0201900 [Oryza sativa Japonica Group]
Length = 787
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 20/151 (13%)
Query: 26 MDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTIL 83
M +++ +++Y W V Y P V+ A +K E ++ K +N+L I +
Sbjct: 38 MQSYIMAEDYDIWRKVSHAYVIP---EVINTAAEKTAFE---QNCKARNFLLSGISHSDY 91
Query: 84 DTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTL 143
D + +TA EIW+A+K +G +K+ + ++E+ EMKSGE L
Sbjct: 92 DHVAHLETAHEIWNALKNFHQGTNNIKELRRDLFKKEYIKFEMKSGEA--------LDDY 143
Query: 144 TEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
+FN I+ + + +DS S +A + E+
Sbjct: 144 LSRFNKILSDL---RSVDS-SYDANYPQSEI 170
>gi|147860291|emb|CAN83967.1| hypothetical protein VITISV_018627 [Vitis vinifera]
Length = 229
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-- 131
+F AI I +AKE WD ++ EG VK S+LQ L FET+ M++ E
Sbjct: 4 IFNAISXDEFHRITTCTSAKEAWDILQVTHEGTNVVKVSKLQMLTSRFETIRMEAHENFG 63
Query: 132 ---------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V I+ L+E+F V +I+ESK +DSL
Sbjct: 64 EFHAKLTDIVNSSFNLGEPIPNSKVVRNIIIYLSERFRAKVTTIKESKAVDSL 116
>gi|57900659|gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1411
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 18 HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLF 75
+Y W + M +++ + W +V+ G+ +G+ LM+ + L+L + + N LF
Sbjct: 6 NYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLMEIDHR---NLQL-NAQAMNALF 59
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE---- 131
++ + D + +TA EIW+ + + E + K ++L L+ ++ET M E
Sbjct: 60 NSLSQEEFDRVSNLETAYEIWNKLAEIHEDTSEYKDAKLHFLKIQYETFSMLPHESVNDM 119
Query: 132 -------------------DVKIVEKILRTLTEKFNDIV 151
D+++ +K+LR L EK+ +V
Sbjct: 120 YGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLV 158
>gi|224115952|ref|XP_002317169.1| predicted protein [Populus trichocarpa]
gi|222860234|gb|EEE97781.1| predicted protein [Populus trichocarpa]
Length = 867
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 8/160 (5%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M+ RS+ W +VE G++EP + S L + +K + K KD + Q++ I
Sbjct: 1 METLFRSQNLWDIVEKGFEEPENISTLEETQRKELEVKKQKDASALYLIQQSLANKIFSR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTE 145
I TA + W ++KKF G++ +++ LE G + ++ E
Sbjct: 61 IVGASTANDAWGILQKKFHGDSDQIAPEIE--------LEAPYGAAMKGEWQSMIDFYRE 112
Query: 146 KFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEE 185
F I C + KD KE +K LL +E E
Sbjct: 113 HFEKIGCPVTPYKDTGLHLAVHSKKEQPLKALLEIMKERE 152
>gi|147789505|emb|CAN71925.1| hypothetical protein VITISV_006194 [Vitis vinifera]
Length = 171
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MTSE + + A P F G +Y W++ M+ + + + W V Y+ P AH K+
Sbjct: 1 MTSEASLNALAPPVFDGINYQVWAIRMEANLDANDMWESVSEEYEVPPLFDNPTMAHIKL 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKS 112
+E R I I T EIW+ +KK++EGN RVK+S
Sbjct: 61 HNE-----------------RRIFTRIMTLKTTNEIWNFLKKEYEGNERVKES 96
>gi|147792105|emb|CAN75234.1| hypothetical protein VITISV_021626 [Vitis vinifera]
Length = 262
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 43/168 (25%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------------- 130
+AKE WD ++ E K S+ Q L FET+ M E
Sbjct: 21 SAKEAWDILQVTHEETNVTKVSKFQMLTSRFETIRMDDHETFGEFHAKLMDIVNSSFNLS 80
Query: 131 ---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDE-VKTLLGAEEEEEA 186
+ K+V KILR+L ++F V +IEESKD+DSL K DE V G +
Sbjct: 81 EPISNSKVVRKILRSLPKRFRAKVTAIEESKDMDSL------KIDELVGEFFGIHGKRCP 134
Query: 187 GKFAEHWTTSRK--GSSNCHSTWKAQ-----------DVSFRERVDCN 221
+ + H R+ G HS+ ++ DVS+ E N
Sbjct: 135 DRASGHTIGGRRNVGCGIAHSSRRSHIRNSDPSIVHPDVSYSEFCSAN 182
>gi|38344342|emb|CAD40164.2| OSJNBa0061A09.3 [Oryza sativa Japonica Group]
gi|38346854|emb|CAD39936.2| OSJNBa0091C12.14 [Oryza sativa Japonica Group]
Length = 393
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE GY VL + K DE K K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINPSIWRIVEKGY-------VLQNPEDPTKEDDENKHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++AK IWD ++ EG V++S+++ + +FE M
Sbjct: 90 AQAANAILSALSGSEFNRVDGIESAKVIWDTLRNLHEGTDSVRESKVEIFKGQFERFVML 149
Query: 128 SGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE D +V+K++R +T + + +V I E D +L
Sbjct: 150 DGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTL 209
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRK 198
+ + +L E +E + TTS K
Sbjct: 210 TPHDLLGRILAHDILVQESKEVIQYINQSSTTSIK 244
>gi|224079051|ref|XP_002335719.1| predicted protein [Populus trichocarpa]
gi|222834636|gb|EEE73099.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
M SE +F+ A F G +Y W++ M+ ++ + + W VE Y+ P A K
Sbjct: 1 MNSEMSFTAVAPSVFDGINYQVWAVRMEAYLDANDLWEAVEQVYEVPTLSDNPTVAQIKN 60
Query: 60 TDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMK 100
E K + K K LF + TI I TAKEIWD +K
Sbjct: 61 HKEKKQRTSKAKATLFAVVSPTIFYRIMTLKTAKEIWDFLK 101
>gi|224157025|ref|XP_002337787.1| predicted protein [Populus trichocarpa]
gi|222869715|gb|EEF06846.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 7 FSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLV-ETGYDEPASGSVLMDAHQKMTDELK 64
+ P I F G +Y WS+ M F+ + + W +V E P + M A K + E K
Sbjct: 8 LNSPII--FTGENYHIWSVKMQAFLEAYDLWEIVSEDKPVAPLPTNPTM-AQIKFSSEEK 64
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
K K K+ + ++ +I I ++AKE W+ +K++++G+ R ++ Q+ L+R+FE L
Sbjct: 65 AKKSKAKSIIQNSVAESIFYRIMACNSAKEAWNKLKEEYQGSDRTRQMQVLNLKRDFEAL 124
Query: 125 EMKSGEEDVKIVEKI------LRTLTEKFND 149
M+ E K ++I +R L E F D
Sbjct: 125 NMQEDETISKYSDRISLIINNIRLLGEDFPD 155
>gi|11994261|dbj|BAB01444.1| unnamed protein product [Arabidopsis thaliana]
Length = 1049
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 35/176 (19%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL-KLKDLKVKNY-LF 75
+Y+ W+ + + K W +VE G P V A + +EL K +DL VK+
Sbjct: 872 NYEIWARIAKTTLTEKGLWDVVENGV-PPDPSKVPELAAKIQPEELSKWRDLAVKDMKAL 930
Query: 76 QAIDRTILDTIRKK----DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM----- 126
Q + ++ D+ +K +AK++WD ++K GN ++++L+ L ++FE L M
Sbjct: 931 QNLQSSLTDSALRKTLYASSAKDVWDLLEK---GNN--EQAKLRRLEKQFEELSMDEAEQ 985
Query: 127 ------------------KSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
K+G+ D ++V K+L +L+E D+ +EE D+ +S
Sbjct: 986 TNSYLDKVRKIAEQLRRLKNGKSDYEVVTKVLGSLSESHEDLATLLEEQVDLKKVS 1041
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 33/175 (18%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNY-LFQ 76
+Y+ W+ + + K W +VE G S + A + + K +DL K+ Q
Sbjct: 432 NYEIWAPIAKTTLTEKGLWDVVENGVPPDPSKVPELAATIQAEEFSKWRDLAEKDMKALQ 491
Query: 77 AIDRTILDTIRKK----DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE- 131
+ ++ D+ +K +AK++WD+++K GN ++++L+ L ++FE L M GE
Sbjct: 492 ILQSSLTDSAFRKTLSASSAKDLWDSLEK---GNN--EQAKLRRLEKQFEELSMNEGEPI 546
Query: 132 ----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +++EK+L TL+ ++D+ + + D+ ++S
Sbjct: 547 NPYIDRVIEIVEQLRRFKIAKSDYQVIEKVLATLSGSYDDVAPVLGDLVDLKNMS 601
>gi|16519476|gb|AAL25185.1|AC079852_18 Putative polyprotein [Oryza sativa]
gi|31430131|gb|AAP52089.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 36/215 (16%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE GY VL + K DE + K+
Sbjct: 37 PYFNGMDYAAWKHKMKMHLKSINPSIWRIVEKGY-------VLQNPEDPTKEDDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++AK IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANAILSALSGSEFNRVDGIESAKVIWDTLRNLHEGMDSVRESKVEILKGQFERFVML 149
Query: 128 SGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE D +V+K++R +T + + +V I E D +L
Sbjct: 150 DGESPSDMYDRLSKIINEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIHERPDYKTL 209
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRK 198
+ + +L E +E + TTS K
Sbjct: 210 TPHDLLGRILAHDMLVQESKEVIQYINQSSTTSIK 244
>gi|357496063|ref|XP_003618320.1| Phytoalexin-deficient 4-2 protein [Medicago truncatula]
gi|355493335|gb|AES74538.1| Phytoalexin-deficient 4-2 protein [Medicago truncatula]
Length = 905
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 31/191 (16%)
Query: 5 GNFSQPAIPRFVG-HYDHWSMLMDNFMRSKE--YWGLVETGYDEPASGSVLMDAHQK-MT 60
G+ ++P P F G +Y W M+ F+RS++ W ++ G P + ++ T
Sbjct: 11 GSSNRP--PLFDGSNYYFWKGKMELFLRSQDNDMWTVITDGDFVPLTKEGIIKVKSAWST 68
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKD--TAKEIWDAMKKKFEGNARVKKSQLQALR 118
DE L K LF + T+ ++ R + AKE+WD +K EG + VK++++
Sbjct: 69 DEKAQVLLNSKARLFLSCALTMEESERVDECKNAKEVWDTLKVHHEGTSHVKETRIDIGV 128
Query: 119 REFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCSIE 155
R+FE EM E ++ + KILR L + +V +I
Sbjct: 129 RKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHERIRKILRCLPSMWRPMVTAIT 188
Query: 156 ESKDIDSLSEE 166
++KD+ S++ E
Sbjct: 189 QAKDLKSMNLE 199
>gi|108708079|gb|ABF95874.1| hypothetical protein LOC_Os03g22290 [Oryza sativa Japonica Group]
Length = 255
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 33/183 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFYGTNYSTWKIKMSTHLKAMSFHIWIIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + +TA EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEINEGASEYKDAKLHFL 113
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSI 154
+ ++ET M E D+++ +K+L L EK+ +V +
Sbjct: 114 KIQYETFSMLPHESVNDIYGRLNVIVNDLKGLGANYTDLEVAQKMLMALPEKYETLVTML 173
Query: 155 EES 157
S
Sbjct: 174 VNS 176
>gi|29126367|gb|AAO66559.1| putative copia-type pol polyprotein [Oryza sativa Japonica Group]
gi|108709148|gb|ABF96943.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 36/183 (19%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQ--KMTDELKLKD 67
P F G Y W M ++S W +VE GY VL + K DE + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINPSIWRIVEKGY-------VLQNPENPTKEDDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++AK IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANAILSALSGSEFNRVDDIESAKVIWDTLRNLHEGTDSVRESKVEILKGQFERFIML 149
Query: 128 SGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE D +V+K++R +T + + +V I E D +L
Sbjct: 150 DGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTL 209
Query: 164 SEE 166
+
Sbjct: 210 TPH 212
>gi|357456157|ref|XP_003598359.1| hypothetical protein MTR_3g010730 [Medicago truncatula]
gi|355487407|gb|AES68610.1| hypothetical protein MTR_3g010730 [Medicago truncatula]
Length = 326
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
++ L +AI + + K TAK ++ ++ +EG+ +V++++ L ++E +MK
Sbjct: 74 IRGALVKAIPKAEYMKMSDKSTAKSMFSSLCANYEGSKKVRETKALMLVHQYELFKMKDD 133
Query: 130 EEDVKI---VEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTL-LGAEEEEE 185
E K V KILR+L ++ V +IEE+ D+++LS E V +V + L E +
Sbjct: 134 EVLSKSSDHVSKILRSLPARWRSKVTAIEEANDLNTLSVEDLVNSLKVHEISLNEHEPSK 193
Query: 186 AGKF 189
KF
Sbjct: 194 KSKF 197
>gi|307136237|gb|ADN34073.1| retrotransposon protein [Cucumis melo subsp. melo]
Length = 479
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 13/97 (13%)
Query: 99 MKKKFEGNARVKKSQLQALRREFETLEMKSGE-------EDVKIVEKILRTLTEKFNDI- 150
MKKK++ VK+ QL+ALR+EFE L+MK GE + IV K +R EK D+
Sbjct: 1 MKKKYQSTTTVKRQQLEALRKEFEILQMKQGESVDEYFSRTLAIVNK-MRIRGEKIEDVA 59
Query: 151 -VCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEEA 186
V I +SK+I ++ ED V+ + G +E++E
Sbjct: 60 MVEKILQSKEICICEDQI---EDVVEVVEGGQEKDEV 93
>gi|50872417|gb|AAT85017.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1116
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++LM ++++ W V EP V+ H+ D + L + + A
Sbjct: 53 NYNDWALLMKIKLQARNLWAAV-----EPDGMEVVF--HE---DRMAL------DAICSA 96
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--EDVKI 135
+ ++ T+ K +A+ D +K GN R++K+ Q +R E+E L ++ E ED +
Sbjct: 97 VPPEMIGTLATKASARAACDCIKTMRVGNDRIRKASAQKVRAEYEWLAFRADETVEDFAL 156
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
FN +V SIE DI +LS E
Sbjct: 157 -----------FNQLVLSIETLLDISTLSLE 176
>gi|110288684|gb|ABB46911.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1453
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 60 TDELKLK---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
TD LK + + K +N L I R+ D + +TA EIW+A++ +G +K+ +
Sbjct: 121 TDALKTEFENNCKARNILLSGISRSEYDRVAHLETAHEIWNALRNFHQGTNNIKELRRDL 180
Query: 117 LRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDID 161
++E+ EMKSG K L +FN I+ S++ S D++
Sbjct: 181 FKKEYIKFEMKSG--------KALDNYLSRFNKILSDLRSVDSSYDVN 220
>gi|77548331|gb|ABA91128.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1258
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M ++ +++Y W V Y P + + A +K+ E ++ K +N L
Sbjct: 19 FSHWCSRMQFYILAEDYDIWRKVSHPYVIPEA---INTAAEKIAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTAHEIWTALSNFHQGTNNIKELRRNLFKKEYIKFEMKPGE 126
>gi|21672057|gb|AAM74419.1|AC123594_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1499
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW+ + +G +K+ + ++E+ EMK GE +
Sbjct: 73 GISRSDYDRVTHFRTAHEIWNVLSNFHQGTNNIKELRRDIFKKEYIKFEMKPGEALNDYL 132
Query: 137 EKILRTLT 144
+ ++ L+
Sbjct: 133 SRFIKILS 140
>gi|16924049|gb|AAL31661.1|AC079179_16 Putative copia-type pol polyprotein [Oryza sativa]
gi|20042887|gb|AAM08715.1|AC116601_8 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
gi|31429920|gb|AAP51904.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 998
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P V+ A K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPYVIP---EVINTAAAKTKFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW+A+ +G +K+ + ++E+ E+K GE
Sbjct: 73 GISRSDYDRVAHFQTAHEIWNALSNFHQGTNNIKELRRAIFKKEYIKFEIKPGE 126
>gi|38346107|emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa Japonica Group]
Length = 1134
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHAYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTAHEIWVALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGE 126
>gi|147835821|emb|CAN66250.1| hypothetical protein VITISV_026924 [Vitis vinifera]
Length = 406
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W + M +++ + W VE Y+ P G++ A K+ E K + K K LF A
Sbjct: 17 NYETWVVRMIVHLQALDVWEAVEENYEVPLLGAIPTVAQMKLHKERKTRKAKAKACLFAA 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ + + +I +++T N + + L +EF + KIV+
Sbjct: 77 LQK--IRSISRRNT--------------NEMKESRTCKLLGKEF---------SNEKIVQ 111
Query: 138 KILRTLTEKFNDIVCSIEESKDIDSLS 164
KIL L EK+ + S+E KD+ ++S
Sbjct: 112 KILVILPEKYEATISSLENLKDLSTIS 138
>gi|62733274|gb|AAX95391.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|108864296|gb|ABA92891.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1584
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTTAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW+A+ +G +K+ ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHFRTAHEIWNALSNFHQGTNNIKELHRDIFKKEYIKFEMKPGEA----- 127
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I+ + + +DS S +A + E+
Sbjct: 128 ---LDDYLSRFNKILSDL---RSVDS-SYDANYPQSEI 158
>gi|57834078|emb|CAE02851.4| OSJNBa0014F04.17 [Oryza sativa Japonica Group]
Length = 491
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 19 YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKDLKVKNYL 74
Y W M ++S W +VE GY VL + K DE + K+ + N +
Sbjct: 44 YVAWKHKMKMHLKSINPSIWRIVEKGY-------VLQNPEDPTKEDDENEHKNAQAANAI 96
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE--- 131
A+ + + + ++AK IWD ++ EG V++S+++ L+ +FE M GE
Sbjct: 97 LSALSESEFNCVDGIESAKVIWDTLQNLHEGTNSVRESKVEILKGQFERFVMLDGESPSD 156
Query: 132 ---------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +V+K++R +T + + +V I E D +L+
Sbjct: 157 MYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTLT 210
>gi|22711551|gb|AAM01150.2|AC113336_2 Putative retroelement [Oryza sativa Japonica Group]
gi|22711567|gb|AAM08852.2|AC113337_16 Putative retroelement [Oryza sativa Japonica Group]
Length = 1813
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 60 TDELKLK---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
TD LK + + K +N L I R+ D + +TA EIW+A++ +G +K+ +
Sbjct: 135 TDALKTEFENNCKARNILLSGISRSEYDRVAHLETAHEIWNALRNFHQGTNNIKELRRDL 194
Query: 117 LRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDID 161
++E+ EMKSG K L +FN I+ S++ S D++
Sbjct: 195 FKKEYIKFEMKSG--------KALDNYLSRFNKILSDLRSVDSSYDVN 234
>gi|449461653|ref|XP_004148556.1| PREDICTED: uncharacterized protein LOC101218085 [Cucumis sativus]
Length = 388
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAH--QKMTDE 62
S+P P F G +Y +W M +++S +Y W +V G P +D ++ DE
Sbjct: 16 SRP--PYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDE 73
Query: 63 LKLK----DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
++K + K N L+ A+ + + I +A+EIW+ ++ EG +VK+S++
Sbjct: 74 NEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQEIWNTLEITHEGTNQVKESKISMFV 133
Query: 119 REFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDIVCSIE 155
+E +M + E + V KILR+L + + V +I+
Sbjct: 134 HNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQ 193
Query: 156 ESKDIDSLSEE 166
E+KD+ L E
Sbjct: 194 EAKDLTKLPLE 204
>gi|242055085|ref|XP_002456688.1| hypothetical protein SORBIDRAFT_03g040848 [Sorghum bicolor]
gi|241928663|gb|EES01808.1| hypothetical protein SORBIDRAFT_03g040848 [Sorghum bicolor]
Length = 1145
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 42/173 (24%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS LM M++++ W VE G D P D + +
Sbjct: 46 NYHEWSTLMRLKMQARQLWDAVEYG-DLPYH-----------------DDRRALEAIIVG 87
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------ 131
+ + + ++ K TAKE+W+++ G RV+++ LQ LR+E+E L + E+
Sbjct: 88 VPQEMQVSLADKLTAKEVWNSIAAARIGIDRVRRATLQRLRKEWENLSFRPREQIEDFAL 147
Query: 132 ------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
+ + VEK+LR +K+ + +IE D L+ E
Sbjct: 148 RLATLKQQMILHGERNLDEERAVEKLLRATPKKYAQLKIAIETLLDFQDLTIE 200
>gi|147804885|emb|CAN60382.1| hypothetical protein VITISV_028713 [Vitis vinifera]
Length = 342
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 32/186 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPAS--GSVLMDAHQKMTDELKLK- 66
P F G Y + M F +S + W ++E G P+ V++ + DE K
Sbjct: 19 PLFTGTDYPYXKTKMTWFXQSINLDLWDVIEDGPHIPSKLENGVMVPKPKHEXDEFDRKK 78
Query: 67 ---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
++K L IDR + I +AKEIW ++ +EGN VK+ ++ L + E
Sbjct: 79 VQLNVKAVFILHCXIDRNEFNRIWHCKSAKEIWRLLEITYEGNNXVKEXRINILVHDXEL 138
Query: 124 LEMKSGEEDVKIVE-----------------------KILRTLTEKFNDIVCSIEESKDI 160
+K+ E V++ KILR+L +K+ V +I+E+KD+
Sbjct: 139 FSIKNFESIVEMFSRFIVIVNELEALGKTYTEVEKXMKILRSLPKKWETKVTTIQEAKDL 198
Query: 161 DSLSEE 166
LS E
Sbjct: 199 TKLSLE 204
>gi|77555275|gb|ABA98071.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1408
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 34 EYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAK 93
+ W V Y P V+ A +K E ++ K +N L I R+ D + +TA+
Sbjct: 6 DIWRKVSHAYVIP---EVINTAAEKTAFE---QNCKARNILLSGISRSDYDRVAHLETAQ 59
Query: 94 EIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCS 153
EIW+A+K +G +K+ + ++E+ EMKSG K L +FN I+
Sbjct: 60 EIWNALKNFHQGTNNIKELRRDLFKKEYNKFEMKSG--------KALDDYLSRFNKILSD 111
Query: 154 IEESKDIDSLSEEAEVKEDEV 174
+ + +DS S +A + E+
Sbjct: 112 L---RSVDS-SYDANYPQSEI 128
>gi|116317866|emb|CAH65896.1| OSIGBa0132G14.4 [Oryza sativa Indica Group]
Length = 1085
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+++M ++++ W V TG + + M+A + +A
Sbjct: 23 NYGDWALMMKVMLQARSLWEAVNTGDTDFQEDPMAMEA------------------ITRA 64
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ +L T+ K AK+ WDA+K G RV+KS+ Q L R++ ++E G K VE
Sbjct: 65 VPPKMLSTLAVKLMAKDAWDAIKLMRVGVNRVRKSKAQQLERQYNSIEFAEG----KTVE 120
Query: 138 KILRTLTEKFNDIVCSIEE-SKDIDSLSEEAEVK----EDEVKTLLGAEEEEEAGKFA-- 190
+ + + + IV S+ I ++ + V E + G + ++AGK
Sbjct: 121 E----FSLRLSSIVTSLATLGAPIPNIFRASFVTGRLCNAEERKGCGGKGGQDAGKLYLT 176
Query: 191 -EHWTTSRKGSS 201
E W TS+ +S
Sbjct: 177 EEQWGTSKGETS 188
>gi|298205141|emb|CBI17200.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 9 QPAIPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGY-DEPASGSVLMDAHQKMTDELKLK 66
Q IP F G YD WS M S++ W LV+ GY +E S + + D +K
Sbjct: 6 QSIIPCFQGSGYDIWSSKMRTLFISEDLWELVDMGYIEEEISKNAIRDVRKK-------- 57
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL-- 124
D K + QAI I I K +KE WDA++ +++ +V + +T+
Sbjct: 58 DAKALFLIQQAIAENIFPQISKATKSKEAWDALQIEYQRTTKVATQDGDGSQTNIKTMVD 117
Query: 125 --EMKSGEEDVKIVEKILRT-----LTEKFNDIV 151
+ D+KI+E+I + L+ K N I+
Sbjct: 118 IVYEAAAMGDIKILEEIPESEFEVQLSPKHNTIL 151
>gi|77555292|gb|ABA98088.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1052
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M + FS A ++ HW M +++ + E + V+++A T
Sbjct: 1 MATPARFSTKAHIFDGTYFPHWCSKMQSYIMA------------EVSHPYVILEAIN--T 46
Query: 61 DELKL---KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
D LK + K +N L I R+ D + +TA EIW+A+K +G +K+ +
Sbjct: 47 DALKTEFENNCKARNMLLSGISRSDYDCVAHLETAHEIWNALKNFHQGTNNIKELRRDLF 106
Query: 118 RREFETLEMKSGE 130
++E+ EMK GE
Sbjct: 107 KKEYIKFEMKPGE 119
>gi|222612921|gb|EEE51053.1| hypothetical protein OsJ_31715 [Oryza sativa Japonica Group]
Length = 753
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 SKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDT 91
S Y L T Y E S+ M A TD+L + V + + + +L ++ +K+T
Sbjct: 515 SIAYCSLTRTNYTE---RSMAMQAVDPGTDDL-CSNCTVLTTILCVVPQDVLTSLAQKET 570
Query: 92 AKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS---------GEEDVKIVEKILRT 142
E+W+A++ G +V ++ +Q LR++F + K D ++++K+L
Sbjct: 571 THEVWEAIRAVCVGVEQV-EANVQKLRQDFAAIAFKPESTSRTSRSASPDKEVIKKMLEV 629
Query: 143 LTEKFNDIVCSIEESKDIDSLSEEAEVKE----DEVKTLLGAEEEEEAGKF---AEHWTT 195
+ E + SIE D+ ++S E ++ +E K +E + +G+ AE W
Sbjct: 630 VPEYHKQVAISIETILDLGTVSIEELTRKLRGVEEWKKPASSEATDSSGRLLLSAEDWLI 689
Query: 196 SRKG 199
+K
Sbjct: 690 HQKA 693
>gi|31432381|gb|AAP54018.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 999
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 SKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDT 91
S Y L T Y E S+ M A TD+L + V + + + +L ++ +K+T
Sbjct: 588 SIAYCSLTRTNYTE---RSMAMQAVDPGTDDL-CSNCTVLTTILCVVPQDVLTSLAQKET 643
Query: 92 AKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS---------GEEDVKIVEKILRT 142
E+W+A++ G +V ++ +Q LR++F + K D ++++K+L
Sbjct: 644 THEVWEAIRAVCVGVEQV-EANVQKLRQDFAAIAFKPESTSRTSRSASPDKEVIKKMLEV 702
Query: 143 LTEKFNDIVCSIEESKDIDSLSEEAEVKE----DEVKTLLGAEEEEEAGKF---AEHWTT 195
+ E + SIE D+ ++S E ++ +E K +E + +G+ AE W
Sbjct: 703 VPEYHKQVAISIETILDLGTVSIEELTRKLRGVEEWKKPASSEATDSSGRLLLSAEDWLI 762
Query: 196 SRKG 199
+K
Sbjct: 763 HQKA 766
>gi|41469483|gb|AAS07268.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709990|gb|ABF97785.1| hypothetical protein LOC_Os03g43550 [Oryza sativa Japonica Group]
Length = 446
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ ++ Y W V Y P V+ A K EL + K +N L
Sbjct: 19 FSHWCSRMQSYIMAENYDIWRKVSHPYVIP---EVINTAAAKTEFEL---NCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 73 GIPRSDYDRVAHLQTAHEIWIALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGE 126
>gi|147795689|emb|CAN76677.1| hypothetical protein VITISV_022012 [Vitis vinifera]
Length = 889
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 41/166 (24%)
Query: 36 WGLVETGYDEPASGSVLMDA------------HQKMTDELKLKDLKVKNYLFQAIDRTIL 83
W ++E D+P S L+D H + +L ++KV L ++DR
Sbjct: 13 WDVIE---DDPTFSSKLVDGVMVPKPKQEWDEHDRXNFQL---NVKVVYTLRCSMDRNEY 66
Query: 84 DTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI-------- 135
+ I + +AKEIW ++ EG +VKKS++ L +E MK E V++
Sbjct: 67 NRICQCKSAKEIWRLLEITHEGTNQVKKSKINLLVHSYELFFMKDNETIVEMITRFTBIV 126
Query: 136 ---------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR+L K++ V +I+E+KD+ L E
Sbjct: 127 NGLEXLGKTYKESKKVMKILRSLPSKWHTKVTTIQEAKDLTKLPLE 172
>gi|22748361|gb|AAN05363.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1099
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW+ + +G +K+ + ++E+ EMK GE +
Sbjct: 73 GISRSDYDRVTHFRTAHEIWNVLSNFHQGTNNIKELRRDIFKKEYIKFEMKPGEALNDYL 132
Query: 137 EKILRTLT 144
+ ++ L+
Sbjct: 133 SRFIKILS 140
>gi|38605883|emb|CAD40009.3| OSJNBb0052B05.12 [Oryza sativa Japonica Group]
Length = 1549
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 36/215 (16%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQ--KMTDELKLKD 67
P F G Y W M ++S W +VE GY VL + + K DE + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINPLIWRIVEKGY-------VLQNPEEPTKENDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++AK IWD ++ EG V++S ++ L+ +FE M
Sbjct: 90 AQAANAILSALSGSEFNRVDGIESAKVIWDTLRNLHEGTDSVRESMVEILKGQFERFVML 149
Query: 128 SGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE D +V+K+++ +T + + +V I E D +L
Sbjct: 150 DGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVQAITPRNSTLVTIIRERPDYKTL 209
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRK 198
+ + +L E +E + TTS K
Sbjct: 210 TPHDLLGRILAHDMLEQESKEVIQYINQTLTTSIK 244
>gi|108709270|gb|ABF97065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1907
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE GY VL K DE + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINPSIWRIVEKGY-------VLQKPEDPTKEDDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++AK IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANVILSALSGSEFNRVDDIESAKVIWDTLRNLHEGTDSVRESKVEILKGQFERFVML 149
Query: 128 SGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE D +V+K++R +T + + +V I E D +L
Sbjct: 150 DGESPSDMYDHLSKIVNEIKGLGSKDMTDEVVVKKMVRAITLRNSTLVTIIRERPDYKTL 209
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRK 198
+ + +L E +E + TTS K
Sbjct: 210 TPHDLLGRILAHDMLVQESKEVIQYINQSSTTSIK 244
>gi|357116160|ref|XP_003559851.1| PREDICTED: uncharacterized protein LOC100825461 [Brachypodium
distachyon]
Length = 466
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 36/182 (19%)
Query: 12 IPRFVG-HYDHWSMLMDNFMRSKE--YWGLVETGYDEPASGSVLMDAHQKMTDELKL--K 66
+P F G +Y W M + S W +VETG+ V++D E +L
Sbjct: 250 VPYFDGTNYASWKHRMKFHLYSMNPLVWRIVETGF-------VVVDEANPTVTEYRLLHN 302
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
+ + N LF A+ + + AKEIW+ +++ EG++ V+++++ LR + + E+
Sbjct: 303 NAQATNALFCALSEDEFSLVCTLENAKEIWNTLQEIHEGSSSVREAKVDLLRCKLDWFEL 362
Query: 127 KSGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDS 162
GE ++ +V+K+LR + + +V I +S D +
Sbjct: 363 SEGESLHDMYTRLNSLVNEIKDLGGKDMTNLCVVKKLLRVMETRNPSLVNIIRQSDDFNE 422
Query: 163 LS 164
L+
Sbjct: 423 LT 424
>gi|18568272|gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]
Length = 1694
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS LM + S K W +VE G P+ G D + +++ + +
Sbjct: 132 PTFDGEDYARWSDLMRFHLTSLHKSIWDVVEFGAQVPSVGD--KDYDEDEVAQIEHFNSQ 189
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + ++ +AKE+WD +K EG+ K ++ + + E ++ G
Sbjct: 190 ATTILLASLSREEYNKVQGLKSAKEVWDVLKTAHEGDELTKITKRETIEGELGRFRLRKG 249
Query: 130 EEDVKIVEKILRTLTEKFNDIVCSIEESK 158
EE + + L+TL + VC++E K
Sbjct: 250 EEPQHMYNR-LKTLVNQ----VCNLESKK 273
>gi|108709899|gb|ABF97694.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1523
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW + +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTAHEIWTTLSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEA----- 127
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I+ + + +DS S +A + E+
Sbjct: 128 ---LDDYLSRFNKILSDL---RSVDS-SYDANYPQSEI 158
>gi|78708301|gb|ABB47276.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1062
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW+ + +G +K+ + ++E+ EMK GE +
Sbjct: 73 GISRSDYDRVTHFRTAHEIWNVLSNFHQGTNNIKELRRDIFKKEYIKFEMKPGEALNDYL 132
Query: 137 EKILRTLT 144
+ ++ L+
Sbjct: 133 SRFIKILS 140
>gi|14018085|gb|AAK52148.1|AC084831_2 putative gag-pol polyprotein, 3'-partial [Oryza sativa Japonica
Group]
Length = 1074
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE GY VL K DE + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINPSIWRIVEKGY-------VLQKPEDPTKEDDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++AK IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANVILSALSGSEFNRVDDIESAKVIWDTLRNLHEGTDSVRESKVEILKGQFERFVML 149
Query: 128 SGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE D +V+K++R +T + + +V I E D +L
Sbjct: 150 DGESPSDMYDHLSKIVNEIKGLGSKDMTDEVVVKKMVRAITLRNSTLVTIIRERPDYKTL 209
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRK 198
+ + +L E +E + TTS K
Sbjct: 210 TPHDLLGRILAHDMLVQESKEVIQYINQSSTTSIK 244
>gi|62701785|gb|AAX92858.1| hypothetical protein LOC_Os11g17420 [Oryza sativa Japonica Group]
gi|77549808|gb|ABA92605.1| hypothetical protein LOC_Os11g17420 [Oryza sativa Japonica Group]
Length = 176
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 8 SQPAIPRFVGHYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKL 65
S+P I V Y +W M++++ S+ Y W V T Y+ P + QK E
Sbjct: 7 SKPHIYNGVDFY-YWKKKMESYITSQGYDIWMKVATVYEIPDRIETIA---QKTDFE--- 59
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+ K +N L I R+ D + A EIW A+ G+ +K+ + ++++ E
Sbjct: 60 NNCKARNILLSGISRSDFDRVSHLAAANEIWKALNNFHTGSTNIKELRKDVFKKDYIKFE 119
Query: 126 MKSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDID 161
M SGE L +FN I+ S+++S D++
Sbjct: 120 MSSGES--------LDDYLGRFNKILSDLRSVDDSYDVN 150
>gi|51854386|gb|AAU10766.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1282
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W + Y P + ++ A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKISHPYVIPEAINI---AAKKSDFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTAHEIWTALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGE 126
>gi|40737034|gb|AAR89047.1| putative integrase [Oryza sativa Japonica Group]
Length = 1507
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW + +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTAHEIWTTLSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEA----- 127
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I+ + + +DS S +A + E+
Sbjct: 128 ---LDDYLSRFNKILSDL---RSVDS-SYDANYPQSEI 158
>gi|147843545|emb|CAN79440.1| hypothetical protein VITISV_043487 [Vitis vinifera]
Length = 822
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 38/196 (19%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDE 62
NFS+ F G Y +W M +++S + W ++E D+P + L+D +
Sbjct: 12 NFSKHRAQFFKGTDYPYWKTRMIWYLQSTDLDVWDVIE---DDPTFPTKLVDGVLVPKPK 68
Query: 63 LKLKDLKVKNYLFQA---------IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
+ +L +N+ A +DR + I + AKEIW ++ EG +VK+S+
Sbjct: 69 QEWNELDRRNFQLNAKTIFTLQCVMDRNEYNRICQCKLAKEIWRLLEITHEGTNQVKESK 128
Query: 114 LQALRREFETLEMKSGEEDVKIVE-----------------------KILRTLTEKFNDI 150
+ L +E MK E V+++ KILR+L ++
Sbjct: 129 INLLVHNYELFSMKENEAIVEMITRFTDIVDGLKVLGKTYKESKKVIKILRSLPSMWHTK 188
Query: 151 VCSIEESKDIDSLSEE 166
V +I+E KD+ L E
Sbjct: 189 VTTIQEVKDLTKLPME 204
>gi|147780996|emb|CAN65924.1| hypothetical protein VITISV_005717 [Vitis vinifera]
Length = 266
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 64/177 (36%)
Query: 13 PRFVG-HYDHWSMLMDNFMR--SKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P G +Y HW + M F++ S++ W VE G+ P ++D + T+ +K K
Sbjct: 14 PFLTGENYSHWKVRMQYFLKRQSEKVWNAVEFGWSPPK----VLDREGRPTNVIKPK--- 66
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L+ R + A S+LQ L FET+ M+
Sbjct: 67 -------------LEWDRGDNEAM------------------SKLQMLTSRFETIRMEDH 95
Query: 130 E-----------------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
E + K+V KILR+L E+F V +IEESKD+DSL
Sbjct: 96 ENFGEFYAXLMDIVNSSFNLGEPIPNSKVVRKILRSLPERFRAKVIAIEESKDVDSL 152
>gi|218201037|gb|EEC83464.1| hypothetical protein OsI_28970 [Oryza sativa Indica Group]
Length = 260
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 41/193 (21%)
Query: 2 TSEGNFSQPAIPRFVGHYDHWSM-LMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
+ G P + R +Y W++ M +R+ WG + E SG++ +
Sbjct: 27 ATTGRLPFPMLTR--ANYVAWAISRMKFLLRTNGAWGAINR---EKTSGAI-----NESK 76
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
D+L L + Q+ID L + +K+TA ++W A++ G RV+ +++Q+L +
Sbjct: 77 DQLAL------TIILQSIDGETLLRVVEKETASDVWVALRYMHVGGERVRVARIQSLHSD 130
Query: 121 FETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDIVCSIEES 157
F+ L+M E ++ +V+K LR ++ KF + S+
Sbjct: 131 FDNLKMSDVESVDDFAAKFTALVGRIRELGEAMDEKYVVKKKLRAVSTKFISVASSLMLF 190
Query: 158 KDIDSLS-EEAEV 169
+I+ ++ EEA V
Sbjct: 191 SNINKMAMEEAIV 203
>gi|224170027|ref|XP_002339334.1| predicted protein [Populus trichocarpa]
gi|222874891|gb|EEF12022.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 5 GNFSQPA-IPRFVGH-YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
NF PA P F GH Y W++ ++ ++++ + W +VE+ G+ A K +E
Sbjct: 4 ANF--PAKTPVFTGHNYGVWAVKIETYLKAFDLWEIVESDRQPTPLGNNPTIAQMKFFNE 61
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKF 103
K K K L A+ I I +AKE WD +K +F
Sbjct: 62 EKAKRFKALTCLHNAVSEEIFTRIMACKSAKETWDKLKAEF 102
>gi|147768205|emb|CAN71530.1| hypothetical protein VITISV_038745 [Vitis vinifera]
Length = 598
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 35/133 (26%)
Query: 55 AHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL 114
A K+ E K + K K LF + +IL I MK +++G+ R+K Q+
Sbjct: 8 AQIKLHKERKTRKAKTKACLFATVSPSILIKI------------MKIEYKGDERIKNMQV 55
Query: 115 QALRREFETLEMKS---------------------GEE--DVKIVEKILRTLTEKFNDIV 151
L REFE +MK G+E + KIV+KIL TL +K+ +
Sbjct: 56 MNLIREFEMKKMKESNAVKDYAAQLLSIADKVRLLGKEFSNEKIVQKILVTLPKKYEATI 115
Query: 152 CSIEESKDIDSLS 164
S+E SKD+ ++S
Sbjct: 116 SSLENSKDLSTIS 128
>gi|78708259|gb|ABB47234.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 794
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHSYVIPEA---INTAAEKTAFE---QNCKSHNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTAHEIWTALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEA----- 127
Query: 137 EKILRTLTEKFNDIVC---SIEESKDID 161
L +FN I+ SI+ S D +
Sbjct: 128 ---LDDYLSRFNKILSDLRSIDSSYDTN 152
>gi|253761775|ref|XP_002489262.1| hypothetical protein SORBIDRAFT_0011s005440 [Sorghum bicolor]
gi|241947011|gb|EES20156.1| hypothetical protein SORBIDRAFT_0011s005440 [Sorghum bicolor]
Length = 1292
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
M +G P + +Y WS LM M++++ W VE G
Sbjct: 189 MYKDGGAGTPWLMLTKSNYHEWSTLMRLNMQARQLWDAVEYG------------------ 230
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
D L D + + ++ + + ++ K +AKE WD++ G V+++ LQ R+E
Sbjct: 231 DLLYHDDRRTLEAIITSVPQEMQVSLADKLSAKEAWDSIAAACIGVDHVRRATLQRRRKE 290
Query: 121 ---------FETLEMK---SGEEDV---KIVEKILRTLTEKFNDIVCSIEESKDIDSLSE 165
TL+ + GE ++ + VEK+LR + +K+ + +IE D L+
Sbjct: 291 EQIEDFALRLATLKQQMILHGERNLDEERTVEKLLRAMPKKYAQLKIAIETLLDFQDLTI 350
Query: 166 EAEVK 170
E ++
Sbjct: 351 EEVIR 355
>gi|147845918|emb|CAN80072.1| hypothetical protein VITISV_023554 [Vitis vinifera]
Length = 269
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 7 FSQPAIPRFV-GHYDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMTD 61
FS+ P F Y +W M +++S + W ++E G P VL+ ++ +
Sbjct: 13 FSKHRAPFFTRTDYPYWKTRMTWYLQSTDLDVWDVIEDGPTFPTKLVTGVLVPKPKQEWN 72
Query: 62 ELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKK-----S 112
EL ++ KV L A+DR + I + AKEIW ++ EG +VK+ +
Sbjct: 73 ELDRRNFQLAAKVVFTLQCAMDRNEYNRICQCKLAKEIWRLLEITHEGTNQVKEFTDIVN 132
Query: 113 QLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
L+AL + ++ E V KILR+L K++ V +I+E+KD+ L E
Sbjct: 133 GLEALGKTYKESEK---------VMKILRSLPSKWHTKVTTIQEAKDLTKLPME 177
>gi|147821530|emb|CAN76743.1| hypothetical protein VITISV_009863 [Vitis vinifera]
Length = 263
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
KV L IDR + I +AKEIW ++ +EGN +VK+S++ L ++E +K
Sbjct: 22 KVVFILHCVIDRNEFNRIWHCKSAKEIWKLLEVTYEGNDQVKESKINILMHDYELFSIKD 81
Query: 129 GEEDVKI-----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSE 165
E V++ V KILR+L K+ V +I+E KD+ LS
Sbjct: 82 FESIVEMFSKFLVIVNELEALGKTYTEVEKVMKILRSLPMKWETKVTTIQEVKDLTKLSL 141
Query: 166 E 166
E
Sbjct: 142 E 142
>gi|108863974|gb|ABA91368.2| phosphoglycerate mutase family protein, expressed [Oryza sativa
Japonica Group]
Length = 1024
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ ++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMKSYIMVEDYDIWRKVSHPYVIPEA---INTAAEKTALE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW A+ +G +K+ + ++E+ EMK GE +
Sbjct: 73 GISRSDYDRVAHLQTAHEIWIALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEALDDYL 132
Query: 137 EKILRTLT 144
+ +TL+
Sbjct: 133 SRFNKTLS 140
>gi|110289097|gb|ABB47647.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E + K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHAYVIPEA---INTAAKKTAFE---QSCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVSHLLTAHEIWVALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEA----- 127
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I+ + + +DS S +A + E+
Sbjct: 128 ---LDDYLSRFNKILSDL---RSVDS-SYDANYPQSEI 158
>gi|62734393|gb|AAX96502.1| Transposable element protein, putative [Oryza sativa Japonica
Group]
gi|77550469|gb|ABA93266.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 655
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKL---KDLKVKNY 73
+ HW M +++ +K+Y W V Y P + T LKL ++ K +N
Sbjct: 17 FSHWCSRMQSYIMAKDYDIWRKVSHPYVIP---------EEINTTALKLEFEQNCKARNI 67
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
L I R+ D + A EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 68 LLSGISRSDYDRVAHLQAAHEIWIALSNFHQGTYNIKELRRGLFKKEYIKFEMKPGEA-- 125
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I+ + + +DS S +A + E+
Sbjct: 126 ------LDDYLSRFNKILSDL---RSVDS-SYDANYPQSEI 156
>gi|11994606|dbj|BAB02660.1| unnamed protein product [Arabidopsis thaliana]
Length = 221
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 71 KNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
+ L Q+I + TAKE+WD++K + G RVK++++Q L +FE ++MK E
Sbjct: 3 RGLLVQSIPEAFTLQVGNLQTAKEVWDSIKTRHVGAERVKEARVQTLMADFEKMKMKEAE 62
Query: 131 -----------------------EDVKIVEKILRTLT-EKFNDIVCSIEESKDIDSLSEE 166
E K+V+K L +L +K+ I+ S+E+ D+++ + E
Sbjct: 63 KIDDFAGRLSELSTKSAPLGVNIEVPKLVKKFLNSLPRKKYIHIIASLEQVLDLNNTTFE 122
>gi|224124880|ref|XP_002319445.1| predicted protein [Populus trichocarpa]
gi|222857821|gb|EEE95368.1| predicted protein [Populus trichocarpa]
Length = 134
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 23/97 (23%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------------- 130
+ K +WD +KK++ G+ R++ Q L REFE MK E
Sbjct: 5 STKNVWDYLKKEYAGDDRIRGMQSLNLIREFEPQRMKDSETIKKYSDKLLGIVNKVRLLS 64
Query: 131 ---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +IVEKIL T+ E++ + ++E +KD+ ++
Sbjct: 65 INFSDCRIVEKILVTVPERYKASITTLENTKDLSKIT 101
>gi|11994262|dbj|BAB01445.1| gag-pol polyprotein-like [Arabidopsis thaliana]
Length = 411
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK-NYLFQA 77
Y+ WS ++ + W +V+ G + + + A K D + ++L VK N +
Sbjct: 15 YEDWSPMVKTRLVENGVWDVVQNGVSPNPTTNPELAATIKAVDLAQWRNLVVKDNKALKI 74
Query: 78 IDRTILDTIRKKD----TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-- 131
+ ++ D++ +K +AKE+WD +KK GN K+++L+ L ++FE L M GE
Sbjct: 75 MQSSLPDSVFRKTISIASAKELWDLLKK---GND-TKEAKLRRLEKQFENLMMYEGERMK 130
Query: 132 ---------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
D K++ K+L +L ++D V ++E + L+ +K
Sbjct: 131 LYLKRLEKIIEELFVLGNPISDDKVIAKLLTSLPRSYDDSVPVLKEFMTLPELTHRDLLK 190
Query: 171 EDEV 174
E+
Sbjct: 191 AFEM 194
>gi|77556051|gb|ABA98847.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1417
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW + +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRLQSYIMAEDYDIWIKVSHAYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW A+ +G +K+ + + E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTAHEIWVALSNFHQGTNNIKELRRDLFKNEYIKFEMKPGE 126
>gi|77552019|gb|ABA94816.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 370
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 25/151 (16%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLK---DLKVKNY 73
+ +W M +++ +++Y W V Y+ P Q T LK K + K +N
Sbjct: 17 FPYWCDKMQSYIMAQDYDIWPKVAQPYEIP---------DQINTTALKTKFENNCKARNI 67
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
L I R+ D + T EIW+A++ +G + +K+ + ++++ EMKS
Sbjct: 68 LLSGISRSDFDRVSHLKTGNEIWNALRNFHQGTSNIKELRKDIFKKDYIKFEMKS----- 122
Query: 134 KIVEKILRTLTEKFNDIVC---SIEESKDID 161
E+ L +FN I+ S++ S D++
Sbjct: 123 ---EEALDDYLARFNKILSNLRSVDSSYDVN 150
>gi|147810766|emb|CAN71795.1| hypothetical protein VITISV_024306 [Vitis vinifera]
Length = 441
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W + M +++ + W +E Y+ P G+ A K+ E K + K K L +
Sbjct: 17 NYETWGVKMIVHLQALDVWEAMEENYEVPPLGANPTVAQMKLHKERKSRKAKAKACLIKN 76
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
I +++ IR+ + MKK E + VK Q L + + + KI++
Sbjct: 77 I--RVMNLIREFE--------MKKMKESDV-VKDYATQLLSXAYXVRLLGKEFSNEKILQ 125
Query: 138 KILRTLTEKFNDIVCSIEESKDI 160
KIL TL EK+ + S+E SKD+
Sbjct: 126 KILVTLPEKYEATISSLENSKDL 148
>gi|27764674|gb|AAO23099.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710202|gb|ABF97997.1| hypothetical protein LOC_Os03g45690 [Oryza sativa Japonica Group]
Length = 276
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 27/161 (16%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKL---KDLKVKNY 73
+ +W M +++++++Y W V Y P +K+ LK + K +N
Sbjct: 17 FSYWCSKMQSYIQAEDYDVWQKVAQPYVIP----------EKIDIALKTEFNNNFKARNI 66
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
L I R+ D + TA EIW+A+ +G +K+ + ++E+ EMK GE
Sbjct: 67 LLSGISRSDFDRVSHLKTAHEIWNALSNFHQGTNNIKELRQDLFKKEYIKFEMKPGEA-- 124
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I+ + + +DS S +A + E+
Sbjct: 125 ------LDDYLSRFNKILSDL---RSVDS-SYDANYTQSEI 155
>gi|15042813|gb|AAK82436.1|AC091247_3 putative polyprotein [Oryza sativa Japonica Group]
Length = 928
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE Y VL + K DE + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINSSIWRIVEKCY-------VLQNPEDPTKEDDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++ K IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANAILSALSGSEFNRVDGIESDKVIWDTLRNLHEGTDSVRESKVEILKGQFERFVML 149
Query: 128 SG-----EEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G D +V+K++R +T + + +V I E D +L+
Sbjct: 150 DGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTLT 191
>gi|108711867|gb|ABF99662.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 944
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE Y VL + K DE + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINSSIWRIVEKCY-------VLQNPEDPTKEDDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++ K IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANAILSALSGSEFNRVDGIESDKVIWDTLRNLHEGTDSVRESKVEILKGQFERFVML 149
Query: 128 SG-----EEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G D +V+K++R +T + + +V I E D +L+
Sbjct: 150 DGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTLT 191
>gi|297725389|ref|NP_001175058.1| Os07g0150400 [Oryza sativa Japonica Group]
gi|255677518|dbj|BAH93786.1| Os07g0150400 [Oryza sativa Japonica Group]
Length = 821
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 19/117 (16%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVET-GYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y+ W++LM +++ W +E G D P H+ D + L + +
Sbjct: 53 NYNDWALLMKIKLQAHCLWAAIEPDGVDVPL--------HE---DRMAL------DAICS 95
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
A+ ++ T+ K +A+E W+ +K GN R++K+ Q +R E+E+L + G+E V
Sbjct: 96 AVPPEMIGTLATKASAREAWECIKTMRVGNDRIRKASAQKVRAEYESLAFR-GDETV 151
>gi|147791264|emb|CAN76839.1| hypothetical protein VITISV_004488 [Vitis vinifera]
Length = 349
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++ M +++ + W VE Y+ P G+ A K+ E K + +K K LF
Sbjct: 17 NYETWAIRMIVHLQAFDVWEAVEENYEVPPLGANPTVAQMKLHKERKTRKVKAKACLFAV 76
Query: 78 -IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
+ + ++ KD A ++ K ++ L +EF S E KIV
Sbjct: 77 NFKKKMRESDAVKDYATQLLSIADK------------VRLLGKEF------SNE---KIV 115
Query: 137 EKILRTLTEKFNDIVCSIEESKDI 160
+KIL TL EK+ + S+E SKD+
Sbjct: 116 QKILVTLPEKYEATISSLENSKDL 139
>gi|357450879|ref|XP_003595716.1| hypothetical protein MTR_2g059560 [Medicago truncatula]
gi|355484764|gb|AES65967.1| hypothetical protein MTR_2g059560 [Medicago truncatula]
Length = 174
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 37/166 (22%)
Query: 31 RSKEYWGLVETGYDEPASGSVLMD---------AHQKMTDELKLKDLKVKNYLFQAIDRT 81
+++E W ++E G G +++D H +L K ++ L +AI +
Sbjct: 10 QNEELWDILEGGI-----GDLVVDEEGADVDRRKHTPAQKKLYKKHHTIRGALVKAIPKA 64
Query: 82 ILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI------ 135
+ K TAK ++ ++ +EG+ +V++++ L ++E +MK GE ++
Sbjct: 65 EYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQYELFKMKDGESIEQMYSRFHT 124
Query: 136 -----------------VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
V KILR+L ++ V +IEE+KD+++LS
Sbjct: 125 LVSGLQILKKSCVASDHVSKILRSLPARWRPKVTAIEETKDLNTLS 170
>gi|108707086|gb|ABF94881.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 702
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 43 YD-EPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKK 101
YD P S S + K DE + K+ +V N + A+ + + + ++AK IWD ++
Sbjct: 19 YDYPPTSTSYNPEDPTKEDDENEHKNAQVANVILSALSGSEFNRVDGIESAKVIWDTLRN 78
Query: 102 KFEGNARVKKSQLQALRREFETLEMKSGEED-------VKIVEKILRTLTEKFNDIVCSI 154
EG V++S+++ L+ +FE M GE KIV +I ++ D V
Sbjct: 79 LHEGTDSVRESKVEILKGQFERFVMLDGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVK 138
Query: 155 EESKDI 160
+ESKD+
Sbjct: 139 DESKDV 144
>gi|18855046|gb|AAL79738.1|AC096687_2 putative polyprotein [Oryza sativa Japonica Group]
Length = 890
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKD 67
P F G Y W M ++S W +VE Y VL + K DE + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINSSIWRIVEKCY-------VLQNPEDPTKEDDENEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++ K IWD ++ EG V++S+++ L+ +FE M
Sbjct: 90 AQAANAILSALSGSEFNRVDGIESDKVIWDTLRNLHEGTDSVRESKVEILKGQFERFVML 149
Query: 128 SG-----EEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G D +V+K++R +T + + +V I E D +L+
Sbjct: 150 DGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTLT 191
>gi|357161714|ref|XP_003579181.1| PREDICTED: uncharacterized protein LOC100829549 [Brachypodium
distachyon]
Length = 363
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSV--LMDAHQKMTDELKLKDLKVKNYL 74
+ W M ++ ++ Y W + Y+ PA ++ + H + + K +NY+
Sbjct: 16 FQFWKAKMKAYIMAQSYAIWEKIAKPYELPADNAITPINLVHVE-------NNYKARNYI 68
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
Q + R+ D + +A E+W+A+ EG+ VK+ + ++E+ EM +GE
Sbjct: 69 IQGLQRSDFDRVAHLASAHEVWNALCSYHEGSNSVKEVRQDMYKKEYMRFEMNTGE 124
>gi|27764656|gb|AAO23081.1| putative copia-type retrotransposon protein [Oryza sativa Japonica
Group]
gi|108709055|gb|ABF96850.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1183
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 33/177 (18%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+ L +
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGTPLTEIDH 57
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ L+L + + N LF ++ + D + ++ EIW+ + + EG + K ++L L
Sbjct: 58 R---NLQL-NAQAMNALFNSLSQEEFDRVSNLESTYEIWNKLAEIHEGTSEYKDAKLHFL 113
Query: 118 RREFETLEMKSGE-------------EDVK----------IVEKILRTLTEKFNDIV 151
++ET M E D+K + +K+LR L EK+ +V
Sbjct: 114 EIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYNVLEVAQKMLRALPEKYETLV 170
>gi|440577378|emb|CCI55402.1| PH01B015M02.3 [Phyllostachys edulis]
Length = 478
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+M M MR++ WG V+ + +++ D++ L + +++A
Sbjct: 23 NYPVWAMKMKANMRAQGVWGAVDPKAKD-----------KEVDDKVDQTALAI---IYKA 68
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ +++ + K+TA+E W ++K EG RVK E + + E+ V+
Sbjct: 69 VPDSMMWQLIGKETAREAWVTLQKMHEGIDRVK-----------EIVSLGDKMEESVAVK 117
Query: 138 KILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEE 183
K LR L EKF +V ++ S +++ E K +E+ + L A EE
Sbjct: 118 KYLRVLPEKFVPVVTTLMYSPNLE------EKKIEEITSSLKAHEE 157
>gi|110738943|dbj|BAF01392.1| hypothetical protein [Arabidopsis thaliana]
Length = 438
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 33/175 (18%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNY-LFQ 76
+Y+ W+ + + K W +VE G S + A + + K +DL K+ Q
Sbjct: 16 NYEIWAPIAKTTLTEKGLWDVVENGVPPDPSKVPELAATIQAEEFSKWRDLAEKDMKALQ 75
Query: 77 AIDRTILDTIRKK----DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE- 131
+ ++ D+ +K +AK++WD+++K GN ++++L+ L ++FE L M GE
Sbjct: 76 ILQSSLTDSAFRKTLSASSAKDLWDSLEK---GNN--EQAKLRRLEKQFEELSMNEGEPI 130
Query: 132 ----------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +++EK+L TL+ ++D+ + + D+ ++S
Sbjct: 131 NPYIDRVIEIVEQLRRFKIAKSDYQVIEKVLATLSGSYDDVAPVLGDLVDLKNMS 185
>gi|147859747|emb|CAN78883.1| hypothetical protein VITISV_038541 [Vitis vinifera]
Length = 457
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 16/149 (10%)
Query: 22 WSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKN-YLFQAIDR 80
W++ M +++ + W +E Y+ P G+ + A K+ E K + K KN + ++ +R
Sbjct: 21 WAVRMTVHLQALDVWEAMEENYEVPPLGANPIVAQMKLHKERKTRKAKAKNLHEYKEDER 80
Query: 81 T----ILDTIRKKDTAKEIWDAMKKKFEGNA-RVKKSQLQALRREFETLEMKSGEEDVKI 135
+++ IR+ + MKK E +A + +QL ++ + L + E KI
Sbjct: 81 IKNMQVMNLIREFE--------MKKMRESDAVKDYAAQLLSIADKVRLLGKEFSNE--KI 130
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
V+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 131 VQKILVTLPEKYEVTISSLENSKDLSTIS 159
>gi|147816559|emb|CAN66099.1| hypothetical protein VITISV_009519 [Vitis vinifera]
Length = 288
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 26 MDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDT 85
M+ ++ + + W VE YD P A K E K + K K LF AI TI
Sbjct: 1 MEAYLDAVDLWEAVEDDYDIPLILDNPTMAQVKNHKERKTRKSKAKACLFAAISATIFTR 60
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
I +AK IW +K ++EG+ R+K + Q
Sbjct: 61 IMSLKSAKVIWSYLKFEYEGDDRIKGMKAQ 90
>gi|3805758|gb|AAC69114.1| putative gag-protease polyprotein [Arabidopsis thaliana]
Length = 627
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYD--EPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
Y +W + M +R +E G+ +P + A +K+ + + +K +F
Sbjct: 21 YGYWKVCMTQIIRGQE------DGFKITKPKANWT---AEEKLQSKFNARAMKA---IFN 68
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
+D I+ +AK+ WD ++K EG + VK+++L + +FE L+M+ E+ VK
Sbjct: 69 GVDEDEFKLIQGCKSAKQAWDTLQKSHEGTSSVKRTRLDHIATQFEYLKMEPDEKIVKFS 128
Query: 137 EKI 139
KI
Sbjct: 129 SKI 131
>gi|357139286|ref|XP_003571214.1| PREDICTED: uncharacterized protein LOC100827279 [Brachypodium
distachyon]
Length = 312
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
+ K +NY+ Q + R+ D + +A E+W+A+ EG+ VK+ + ++E+ EM
Sbjct: 61 NYKARNYIIQDLQRSDFDRVTHLASAHEVWNALCSYHEGSNSVKEVRQDMYKKEYMKFEM 120
Query: 127 KSGEEDVKIVEKILRTLTEKFNDIVCSI 154
K+GE L L +FN I+ ++
Sbjct: 121 KTGES--------LDELFARFNKILSNL 140
>gi|356532964|ref|XP_003535039.1| PREDICTED: uncharacterized protein LOC100817644, partial [Glycine
max]
Length = 335
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 82 ILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILR 141
I I + + K IWD +K+++ G+ R++ Q+ LR+EFE M+ E + K+L
Sbjct: 1 IFTRIMTRKSPKAIWDYLKEEYAGDDRIRSMQVLNLRKEFELQRMQESEIIKEYSNKLL- 59
Query: 142 TLTEKFNDIVCSIEESKDIDSLSEEAEV----KEDEVKTLLGAEEEEEAGKFAEHWTTSR 197
++ K + S+E +KD+ ++ AEV + E + L+ + E A+H +
Sbjct: 60 SIANKIKLLGTSLENTKDLSKIT-LAEVLHALQAQEQRRLMRQDRVVEGALPAKHHEDEK 118
Query: 198 KGSSNCHSTWKAQDVSFR 215
K C K ++
Sbjct: 119 KNHPPCQHCGKLGHPPYK 136
>gi|338808430|gb|AEJ07932.1| Ji4 gag protein [Zea mays subsp. mexicana]
Length = 897
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS LM + S K W +VE G P+ G D + +++ + +
Sbjct: 132 PTFDGEDYARWSDLMRFHLTSLHKSIWDVVEFGVQVPSVGDENYDEDE--VAQIEHFNSQ 189
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + ++ +AKEIWD +K EG+ K ++ + + E ++ G
Sbjct: 190 ATTILLASLSREEYNKVQGLKSAKEIWDVLKTAHEGDELTKITKRETIEGELGRFRLRKG 249
Query: 130 EEDVKIVEKILRTLTEKFNDI 150
EE + + L+TL + ++
Sbjct: 250 EEPQHMYNR-LKTLVNQVRNL 269
>gi|62734127|gb|AAX96236.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77549895|gb|ABA92692.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1500
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 1 MTSEGNFS-QPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAH 56
M + FS +P I F G + W +M +++ ++ Y W V Y P + ++
Sbjct: 1 MATPARFSTKPHI--FDGTDFPDWCSMMQSYIMAENYDIWRKVSHPYVIPEAINI----- 53
Query: 57 QKMTDELKLK---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
D LK + + K +N L I R D + +TA EIW+++K +G +K+ +
Sbjct: 54 ----DALKTEFENNCKARNILLSGISRADYDRVVHLETAHEIWNSLKNFHQGTNNIKEHR 109
Query: 114 LQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIV 151
+ E+ EMK G K L +FN I+
Sbjct: 110 RDLFKNEYIKFEMKPG--------KALDDYLSRFNKIL 139
>gi|440577371|emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]
Length = 2029
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y W M+ +++++ Y W V+ + PA ++ +A + E + K
Sbjct: 9 PVFDGIDYPFWKSRMETYIQAQGYAIWRKVKVRFAVPADENI--NAGNMVDVE---ANAK 63
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
+N + Q + R+ D I +A +IW + EG ++K + +RE+ EM +G
Sbjct: 64 ARNIIIQGLSRSEFDRISHLSSAYDIWVTLDAYHEGTTQIKTVRQDQFKREYNKFEMLAG 123
Query: 130 E 130
E
Sbjct: 124 E 124
>gi|147765311|emb|CAN69241.1| hypothetical protein VITISV_009386 [Vitis vinifera]
Length = 925
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDI 150
T EIW+ +KK++EGN RVK Q+ L REFE MK E ++++L + + ++
Sbjct: 55 TKNEIWNFLKKEYEGNERVKGMQVLNLIREFEMQRMKESETIKDYLDRLLSIVNKVLVEL 114
Query: 151 VCSIEE 156
C + +
Sbjct: 115 GCKMSQ 120
>gi|147801937|emb|CAN66076.1| hypothetical protein VITISV_026162 [Vitis vinifera]
Length = 523
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 29/163 (17%)
Query: 36 WGLVETGYDEPAS--GSVLMDAHQKMTDELKLKDL----KVKNYLFQAIDRTILDTIRKK 89
W ++E G P VL+ ++ +EL ++ KV L A+DR + I +
Sbjct: 13 WDVIEDGPTFPTKLVDGVLVPKPKQEWNELDRRNFQLNAKVVFTLQCAMDRNEYNRICQC 72
Query: 90 DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI-------------- 135
+AKEIW ++ EG +VK+S++ L +E MK E V++
Sbjct: 73 KSAKEIWRLLEITHEGTNQVKESKINLLVHNYELFSMKETETIVEMITRFTDIVNGLEAL 132
Query: 136 ---------VEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
V KILR L K++ + +I+E+KD+ L E V
Sbjct: 133 GKTYKESEKVMKILRFLPSKWHTKLTAIQEAKDLTKLPMEELV 175
>gi|116308817|emb|CAH65957.1| OSIGBa0113D21.2 [Oryza sativa Indica Group]
Length = 1345
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 34 EYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAK 93
+ W V Y P V+ A +K E ++ K +N L I R+ D + +TA
Sbjct: 6 DIWRKVSHAYVIP---EVINTAAEKTAFE---QNCKARNILLSGISRSDYDRVAHLETAH 59
Query: 94 EIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
EIW+A+K +G +K+ + ++++ EMKSGE
Sbjct: 60 EIWNALKNFHQGTNNIKELRRDLFKKKYIKFEMKSGE 96
>gi|356542322|ref|XP_003539617.1| PREDICTED: uncharacterized protein LOC100778503 [Glycine max]
Length = 572
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 30/143 (20%)
Query: 28 NFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIR 87
NF+ SK+ W D P V + + L ++ A+ + I
Sbjct: 436 NFLHSKKMWNPSPLP-DNPTVNQVRFHIEEVAKEGRALAIIQA------ALHDDVFIKIV 488
Query: 88 KKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE----------------- 130
+TAKE D +K F+G+ R K+ ++ LRREFE ++MK E
Sbjct: 489 NLETAKEAGDKLKAAFQGSERTKRMKVLNLRREFEAIKMKEAETVKDFADRLSKVVTNIR 548
Query: 131 ------EDVKIVEKILRTLTEKF 147
D ++VEKI L E+F
Sbjct: 549 LLGEELSDQRVVEKIFLCLPERF 571
>gi|58533052|emb|CAI44656.1| OSJNBa0061C06.6 [Oryza sativa Japonica Group]
Length = 209
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
V + +A+ +L + K+ K+ WDA+K G RV+KS+ Q LR++F+ +E K G
Sbjct: 2 VLEAVLKAVPADLLPVLAVKEMTKDAWDAIKTMRVGVNRVRKSKAQELRKQFDAIEFKEG 61
Query: 130 EEDVKIVEKILRTLTEKFNDIVC---SIEESKDIDSL 163
E VE+ L+ N++ +EESK+ L
Sbjct: 62 ES----VEEFSIRLSWLVNNLAVLGIQLEESKNSGPL 94
>gi|224153976|ref|XP_002337421.1| predicted protein [Populus trichocarpa]
gi|222839166|gb|EEE77517.1| predicted protein [Populus trichocarpa]
Length = 123
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-----EPASGS---------VLMDAHQ 57
P+F G +YD W++ M + + + W +VE G + E A GS +++ A
Sbjct: 14 PQFNGTNYDFWAVKMKTVLIALDLWEVVEDGINSHQAPEIAGGSGDEESEADQIILHAST 73
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGN 106
+E K+K+ K + + A+ + IR + TAKE WD + ++F G+
Sbjct: 74 TSREE-KIKNAKALSLIQGALTDDLFPRIRNEKTAKEAWDILSREFRGD 121
>gi|11994264|dbj|BAB01447.1| gag-pol polyprotein-like [Arabidopsis thaliana]
Length = 420
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK-NYLFQA 77
Y+HWS + + W +V+ G + + A + D + ++ +K N +
Sbjct: 15 YEHWSPIAKKRLVENGVWDVVQNGVSPNPTKIPQLAATIQAVDLAQWRNRVIKDNKALKI 74
Query: 78 IDRTILDTIRKKD----TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
+ ++ D++ +K +AKE+WD +KK GN K+++L+ L ++FE L M GE +
Sbjct: 75 MQSSLPDSVFRKTISIASAKELWDLLKK---GND-TKEAKLRRLEKQFEKLMMYEGEP-M 129
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K + +TE+F + I + K I L
Sbjct: 130 DLYLKRVEEITERFEVLGNPISDDKVITKL 159
>gi|147863595|emb|CAN79779.1| hypothetical protein VITISV_013617 [Vitis vinifera]
Length = 1190
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 6 NFSQPAIPRFVGH-YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDE 62
NFS+ F G Y +W M +++S + W ++E D+P + L+D +
Sbjct: 12 NFSKHKTSFFTGTDYPYWKTRMTWYLQSTDLDVWDVIE---DDPTFPTKLIDGVLVPKPK 68
Query: 63 LKLKDLKVKNYLFQA---------IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
+ +L +N+ A +DR + I + +AKEI ++ EG +VK+S+
Sbjct: 69 QEWNELDRRNFQLNAKTVFTLQCVMDRNEYNRICQCKSAKEISRLLEITHEGTNQVKESK 128
Query: 114 LQALRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDI 150
+ L +E MK E V++ V KILR+L K++
Sbjct: 129 INLLVHNYELFSMKENETIVEMITRFTDIVNGLEALGKTYKESEKVMKILRSLPSKWHTK 188
Query: 151 VCSIEESKDIDSLSEE 166
V +I+E+K + L E
Sbjct: 189 VTAIQEAKVLTKLPME 204
>gi|357140566|ref|XP_003571836.1| PREDICTED: uncharacterized protein LOC100834324 [Brachypodium
distachyon]
Length = 295
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ M MR++ W V D AS V +D KD + Q
Sbjct: 18 NYSIWAIKMRAIMRAQGVWEAV----DPDASNKVAIDEK---------KDETAIVAIHQG 64
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
I ++ I K A+E W+ +K + R+K++++Q L EF L++K E
Sbjct: 65 IPEDLVIMITDKKAAREAWETLKTIRLADDRIKEARVQTLTSEFHRLQVKDTEFVDDFTL 124
Query: 131 ----------------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
E++ V+K LR + K I +IE+ ++ +++ E EV
Sbjct: 125 RMTTIINEIRVLGEKFEELYAVKKFLRAVPSKVLQIASAIEQFGNLKTMTME------EV 178
Query: 175 KTLLGAEEEE 184
L A E E
Sbjct: 179 VGRLKAHESE 188
>gi|62701838|gb|AAX92911.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77549906|gb|ABA92703.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1323
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E + K +N L
Sbjct: 19 FFHWCSRMQSYIMAEDYDIWRKVSHPYVIPEA---INTAAEKTAFE---QICKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + TA EIW A+ +G +K+ + E+ EMK GE
Sbjct: 73 GISRSGYDRVAHLQTAHEIWVALSNFHQGTNNIKELHRDLFKTEYIKFEMKPGEA----- 127
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I + + + +DS S +A E E+
Sbjct: 128 ---LDDYLSRFNKI---LSDLRFVDS-SYDANYPESEI 158
>gi|357152115|ref|XP_003576015.1| PREDICTED: uncharacterized protein LOC100821230 [Brachypodium
distachyon]
Length = 421
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKD-LKVKNYLF 75
+ W M ++ ++ Y W V Y+ PA + T+ + +++ K +NY+
Sbjct: 16 FQFWKAKMKAYIMAQSYAIWEKVAKPYELPADDVI------TPTNLVHVENNYKARNYII 69
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI 135
Q + R+ D + + +A E+W+A+ EG+ V + + ++E+ EMK+ E
Sbjct: 70 QGLQRSDFDRVAQFASAHEVWNALYSCHEGSNSVNEVRQDMYKKEYMKFEMKTVES---- 125
Query: 136 VEKILRTLTEKFNDIVCSI 154
L L +FN+I ++
Sbjct: 126 ----LDELFARFNEIFSNL 140
>gi|15217314|gb|AAK92658.1|AC079634_19 Putative retroelement [Oryza sativa Japonica Group]
Length = 1131
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 38/146 (26%)
Query: 44 DEPASGSVLMDAHQKMTD-----------ELKLKDLKVK----NYLFQAIDRTILDTIRK 88
D+P SG + + D E+ ++L++ N LF ++ + D +
Sbjct: 45 DQPGSGGLTGGCRPSIVDVGFAITGKPLTEIDHRNLQLNAQAMNALFNSLSQEEFDRVSN 104
Query: 89 KDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE----------------- 131
+TA EIW+ + + EG + K ++L L+ ++ET M E
Sbjct: 105 LETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQYETFSMLPHESVNDMYGRLNVIVNDLKG 164
Query: 132 ------DVKIVEKILRTLTEKFNDIV 151
D++I +K+LR L EK+ +V
Sbjct: 165 LGANYTDLEIAQKMLRALPEKYETLV 190
>gi|108707426|gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2111
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 31/180 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G HY W M + S W +V TG D P L +++ ++ +
Sbjct: 53 PQFDGTHYAAWKHKMKLHLISLHPSIWKVVCTGVDVPHDDMELTSEQEQLIH----RNAQ 108
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + A+ + + + AKEIWD ++ EG+ V++++++ L M
Sbjct: 109 ASNAILSALSPEEFNKVDGLEEAKEIWDTLQLAHEGSPAVREAKIELLEGRLGRFMMDDK 168
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLSE 165
G ED+ +V+++LR ++ +V I E KD L+
Sbjct: 169 ETPQEMYDRMMILVNKIKGLGSEDMTNHFVVKRLLRAFGPRYPTLVSMIRERKDFKRLTP 228
>gi|23928449|gb|AAN40035.1| putative gag-pol polyprotein [Zea mays]
Length = 1706
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS LM + S K W +VE G P+ G D + +++ + +
Sbjct: 132 PTFDGEDYARWSDLMRFHLISLHKSIWDVVEFGAQVPSVGDENYDEDE--VAQIEHFNSQ 189
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + ++ +AKEIWD +K EG+ K ++ + + E ++ G
Sbjct: 190 ATTILLASLSREEYNKVQGLKSAKEIWDVLKTAHEGDELTKITKRETIEGELGRFRLRKG 249
Query: 130 EEDVKIVEKILRTLTEKFNDI 150
EE + + L+TL + ++
Sbjct: 250 EEPQHMYNR-LKTLVNQVRNL 269
>gi|147817121|emb|CAN62160.1| hypothetical protein VITISV_017633 [Vitis vinifera]
Length = 645
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMT 60
NFS+ F G Y + M +++S + W ++E G P VL+ ++
Sbjct: 12 NFSKHRALFFTGTDYPYRKTKMTWYLQSTDLDVWDVIEDGPTFPTKLVDGVLVPKPKQEW 71
Query: 61 DELKLKDLKVKN---YLFQ-AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL K+ ++ + Q A+DR + I + +AKEIW ++ EG +VK+S++
Sbjct: 72 NELDRKNFQLNAKAVFTLQCAMDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINL 131
Query: 117 LRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIE 155
L +E MK E V+++ +F DIV +E
Sbjct: 132 LVHNYELFSMKETETTVEMI--------TRFTDIVNGLE 162
>gi|357469437|ref|XP_003605003.1| hypothetical protein MTR_4g022750 [Medicago truncatula]
gi|355506058|gb|AES87200.1| hypothetical protein MTR_4g022750 [Medicago truncatula]
Length = 135
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 135 IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+VEKILR++T +FN +VCSIEES D+ + S
Sbjct: 1 MVEKILRSMTSRFNYVVCSIEESNDLTTFS 30
>gi|62734187|gb|AAX96296.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77548987|gb|ABA91784.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1325
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M ++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSRMQFYIMAEDYDIWRKVSHPYVIPEA---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R+ D + T EIW + +G +K+ + ++E+ EMK GE
Sbjct: 73 GISRSDYDRVAHLQTVHEIWTTLSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEA----- 127
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I+ ++ + +DS S +A + E+
Sbjct: 128 ---LDDYLSQFNKILSNL---RSVDS-SCDANYPQSEI 158
>gi|284434583|gb|ADB85321.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1147
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y W M+ +++++ Y W V+ + PA ++ +A E + K
Sbjct: 11 PVFDGIDYPFWKSRMETYIQAQGYAIWRKVKVRFAVPADENI--NAGNMADVE---ANAK 65
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
+N + Q + R+ D I +A +IW + EG ++K + +RE+ EM +G
Sbjct: 66 ARNIIIQGLSRSEFDRISHLSSAYDIWVTLDAYHEGTTQIKTVRQDQFKREYNKFEMLAG 125
Query: 130 E 130
E
Sbjct: 126 E 126
>gi|147794641|emb|CAN69159.1| hypothetical protein VITISV_041594 [Vitis vinifera]
Length = 597
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 23/113 (20%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-- 131
+F AI I +AK+ WD ++ EG VK S LQ L FE + M+ E
Sbjct: 463 IFNAISXDEFRRIATCTSAKKAWDILQVTHEGTNAVKVSILQMLTSRFEIIRMEDHENFG 522
Query: 132 -------DV--------------KIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
D+ K+V KIL +L E+F V I ESK +D L
Sbjct: 523 EFHAKLMDIVNSSFNLGGLILKSKVVRKILXSLPERFRAKVTIIRESKGVDFL 575
>gi|357459253|ref|XP_003599907.1| hypothetical protein MTR_3g048800 [Medicago truncatula]
gi|355488955|gb|AES70158.1| hypothetical protein MTR_3g048800 [Medicago truncatula]
Length = 448
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 12 IPRFVGHYDHWSMLMDNFMR-----SKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+P+F G +S+ NF +E W ++E G G +++D D K
Sbjct: 29 MPKFNGDPQEFSLWKTNFYSHVMGLDEELWDILEDGI-----GDLVVDEEGFAIDRRKHI 83
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
+ KN R+I + K TA ++ + EG+ +V++++ L ++E +M
Sbjct: 84 PAQ-KNST-----RSITQSEDDKSTAMSMFAFLCANCEGSKKVREAKALMLVHQYELFKM 137
Query: 127 KSGEEDVKIVE----KILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEE 182
K E +V KILR+L ++ V +IEE+KD+++LS E V +V + +
Sbjct: 138 KDDENIDYVVSDHLSKILRSLPARWRPKVTAIEEAKDLNTLSVEDLVNSLKVHEI--SLN 195
Query: 183 EEEAGKFAEHWTTSRKGSSN 202
E E K ++ KG S+
Sbjct: 196 EHEPSKKSKSIALPSKGKSS 215
>gi|357453875|ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula]
gi|355486266|gb|AES67469.1| Beta-galactosidase [Medicago truncatula]
Length = 2260
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ +N +R +++WG + PA+ + D ++ DE + VK++L A
Sbjct: 547 NYTEWALNAENKIRGRKHWGYISGKKVTPATKT--SDEYETWEDE----NCLVKSWLLDA 600
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+ + + + TAK+IW+++K+ + V + +A + E + +K V
Sbjct: 601 MTKDVRSLFIRLPTAKKIWESVKETYS----VSQDASKAYQLYCEVISIKQDGGSVVTYF 656
Query: 138 KILRTLTEKFNDIV-CSIEESKDIDSLSEE 166
L+ L ++ + I C++ +KD+++ + +
Sbjct: 657 AKLQKLWQEIDAIEDCTMVCTKDVETYTNK 686
>gi|99866707|gb|ABF67922.1| Ji1 putative gag protein [Zea mays]
Length = 898
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS LM + S K W +VE G P+ G D + +++ + +
Sbjct: 134 PTFNGEDYAMWSNLMRFHLTSLHKRLWDVVEYGVQVPSVGDEDYDTDE--VAQIEHFNSQ 191
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ + + ++ AKEIWD +K EG+ K ++ + L E ++ G
Sbjct: 192 ATTILLASLSKEEYNKVQGLKNAKEIWDLLKTAHEGDELTKITKRETLEGELGRFRLRQG 251
Query: 130 EEDVKIVEKILRTLTEKFNDI 150
EE + + L+TL + ++
Sbjct: 252 EEPQDMYNR-LKTLVNQVRNL 271
>gi|108862632|gb|ABA98050.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1290
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWCSSMQSYIMAEDYDIWRKVSHAYVIPEA---INTAAKKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
+ D + TA EIW A+ +G +K+ + + E+ EMK GE
Sbjct: 73 GFSHSDYDRVAHLQTAHEIWVALSNFHQGTNNIKQLRRDLFKNEYIKFEMKPGE 126
>gi|19697443|gb|AAL93078.1|AC093180_25 putative polyprotein [Oryza sativa Japonica Group]
Length = 697
Score = 43.9 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA+EIW A+ +G +K+ + ++E+ E
Sbjct: 32 QNCKARNILLSGISRSDYDRVAHLQTAQEIWSALSNFHQGTNNIKELRRDLFKKEYIKFE 91
Query: 126 MKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
MK GE L +FN I + + + +DS S +A + E+
Sbjct: 92 MKPGEA--------LDDYLSRFNKI---LSDRRSVDS-SYDANYPQSEI 128
>gi|108709066|gb|ABF96861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 695
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA+EIW A+ +G +K+ + ++E+ E
Sbjct: 32 QNCKARNILLSGISRSDYDRVAHLQTAQEIWSALSNFHQGTNNIKELRRDLFKKEYIKFE 91
Query: 126 MKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
MK GE L +FN I + + + +DS S +A + E+
Sbjct: 92 MKPGEA--------LDDYLSRFNKI---LSDRRSVDS-SYDANYPQSEI 128
>gi|357150715|ref|XP_003575552.1| PREDICTED: uncharacterized protein LOC100846331 [Brachypodium
distachyon]
Length = 363
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSV--LMDAHQKMTDELKLKDLKVKNYL 74
+ W M ++ ++ Y W + Y+ PA ++ + H + + K +NY+
Sbjct: 16 FQFWKAKMKAYIMAQSYAIWEKIAKPYELPADNAITPINLVHVE-------NNYKARNYI 68
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
Q + R+ D + +A E+W+A+ EG+ VK+ + ++E+ EM + E
Sbjct: 69 IQGLQRSDFDRVAHLASAHEVWNALCSYHEGSNSVKEVRQDMYKKEYMRFEMNTSE 124
>gi|357466921|ref|XP_003603745.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355492793|gb|AES73996.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 627
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
++ L +AI + + K T K + ++ +EG+ +V++++ L ++E +MK
Sbjct: 115 IRGALVKAIPKEEYMKMSNKSTVKSMSASLCANYEGSKKVREAKTLMLIHQYELFKMKDD 174
Query: 130 EEDVKI----VEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
E + V KILR+L ++ V +IEE+KD+ +LS E V
Sbjct: 175 ESIDYVASDHVSKILRSLPARWRPKVTAIEEAKDLKTLSVENLV 218
>gi|147854125|emb|CAN81294.1| hypothetical protein VITISV_003263 [Vitis vinifera]
Length = 748
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMT 60
NFS+ P F+G Y +W M +++S + W ++E P VL+ ++
Sbjct: 12 NFSKHRAPFFMGTDYPYWKTRMTWYLQSTDLDVWDVIENDPTFPTKLVDEVLVPKPKQEW 71
Query: 61 DELKLKD--LKVKN-YLFQ-AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
+EL ++ L VK + Q A+DR + I + +AKEIW ++ E +VK S++
Sbjct: 72 NELDRRNFQLNVKAIFTLQCAMDRNEYNRICQCKSAKEIWRLLEITHERTNQVKGSKINL 131
Query: 117 LRREFETLEMKSGEEDVKIVEKILRTL 143
L +E MK E V+++ + L
Sbjct: 132 LVHNYELFSMKETETIVEMITSFRKNL 158
>gi|111184721|gb|ABH08430.1| putative integrase [Beta vulgaris]
Length = 1516
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 4 EGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGS--------VL 52
E +S P F G +Y++W M+ F++++ Y W ++E G E + + L
Sbjct: 8 EEGYSTQRPPMFNGKYYNYWKNRMEIFIKAENYQVWRVIEVGDFEVTTTNDKNEVTLKPL 67
Query: 53 MDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKS 112
D + +++++ + +K L + + I +AK+IWD ++ EG VK+S
Sbjct: 68 SDYDKSDFEKMEVNAMAIK-LLHCGLGPHEHNRIMGCKSAKQIWDLLEVTHEGTNEVKRS 126
Query: 113 QLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIV 151
++ L ++E MKS E +R + +F +I+
Sbjct: 127 KIDLLMNQYELFCMKSKES--------IRDMFTRFTNII 157
>gi|121501697|gb|ABM55238.1| integrase [Beta vulgaris]
Length = 1516
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 4 EGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGS--------VL 52
E +S P F G +Y++W M+ F++++ Y W ++E G E + + L
Sbjct: 8 EEGYSTQRPPMFNGKYYNYWKNRMEIFIKAENYQVWRVIEVGDFEVTTTNDKNEVTLKPL 67
Query: 53 MDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKS 112
D + +++++ + +K L + + I +AK+IWD ++ EG VK+S
Sbjct: 68 SDYDKSDFEKMEVNAMAIK-LLHCGLGPHEHNRIMGCKSAKQIWDLLEVTHEGTNEVKRS 126
Query: 113 QLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIV 151
++ L ++E MKS E +R + +F +I+
Sbjct: 127 KIDLLMNQYELFCMKSKES--------IRDMFTRFTNII 157
>gi|357167499|ref|XP_003581193.1| PREDICTED: uncharacterized protein LOC100820973 [Brachypodium
distachyon]
Length = 313
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKD-LKVKNYLF 75
+ W M ++ ++ Y W + Y+ PA ++ T+ + +++ K +NY+
Sbjct: 16 FQFWKAKMKAYIMTQSYAIWEKIAKSYELPADDAI------TPTNLVHVENNYKARNYII 69
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI 135
Q + R+ D + +A E+W+ + EG+ VK+ + ++E EMK+GE +
Sbjct: 70 QGLQRSDFDRVAHLASAHEVWNTLCSYHEGSNSVKEVRKDTYKKEDMKFEMKTGESLYEF 129
Query: 136 VEKI------LRTLTEKFNDIVCS 153
+ LR L + D+ S
Sbjct: 130 FARFNKILSNLRALGVTYTDVEAS 153
>gi|147767704|emb|CAN66703.1| hypothetical protein VITISV_028977 [Vitis vinifera]
Length = 753
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 2 TSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
+ G+ S +P F G +Y W++ M + + + W VE Y+ P K+
Sbjct: 39 NTNGDTSFLPVPVFNGDNYQAWAIRMTVHLEALDLWEAVEEDYEVPPLXDNPSINQMKIH 98
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKK 111
E K + K K LF A+ +IL I + ++A IW+ +K ++ N RV K
Sbjct: 99 RERKTRKXKAKAXLFYAVSPSILTRIMQMESAAAIWEYLKNEYXENERVMK 149
>gi|338808445|gb|AEJ07946.1| Ji4 putative gag protein [Zea diploperennis]
Length = 897
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS LM + S K W +VE G P+ G D + +++ + +
Sbjct: 131 PTFDGEDYAMWSNLMRFHLTSLHKSIWDVVEFGVQVPSVGD--EDYDEDEVAQIEHSNSQ 188
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ + + ++ +AKEIWD +K EG+ K ++ + + E ++ G
Sbjct: 189 ATTILLASLSKEEYNKVQGLKSAKEIWDLLKTAHEGDELTKITKRETIEGELGRFRLRQG 248
Query: 130 EEDVKIVEKILRTLTEKFNDI 150
EE + + L+TL + ++
Sbjct: 249 EEPQDMYNR-LKTLVNQVRNL 268
>gi|62733490|gb|AAX95607.1| RNase H, putative [Oryza sativa Japonica Group]
gi|108709336|gb|ABF97131.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2282
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 19 YDHWSMLMDNFMR--SKEYWGLVETGYDEPASGSVLMDAH--QKMTDELKLKDLKVKNYL 74
Y W M ++ + W +VE GY VL K DE + K+ + N +
Sbjct: 44 YAAWKHKMKMHLKFINPSIWRIVEKGY-------VLQKPEDPTKEDDENEHKNAQAANAI 96
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE--- 131
A+ + + + ++AK IWD ++ EG V++S+++ L+ +FE M GE
Sbjct: 97 LSALSGSEFNRVDGIESAKVIWDTLRNLHEGTDSVRESKVEILKGQFERFVMLDGESPSD 156
Query: 132 ---------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +V+K++R +T + + +V I E D +L+
Sbjct: 157 MYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRERLDNKTLT 210
>gi|242034621|ref|XP_002464705.1| hypothetical protein SORBIDRAFT_01g024630 [Sorghum bicolor]
gi|241918559|gb|EER91703.1| hypothetical protein SORBIDRAFT_01g024630 [Sorghum bicolor]
Length = 513
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 43/179 (24%)
Query: 8 SQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKD 67
S P + R +Y W++ M +R++ W ++ G D + D
Sbjct: 162 SWPMLTRT--NYGEWAVTMKVKLRARRLWNAIDKGTDN------------------EEDD 201
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ + A+ + + K TAKE W+A+ G+ R KK+ Q L++E+ L+ K
Sbjct: 202 MSAMETILAAVPTEYREPLGAKKTAKEAWEAIAAMRVGSDRAKKATAQLLKQEYANLKFK 261
Query: 128 S------------------GEEDVKIVE-----KILRTLTEKFNDIVCSIEESKDIDSL 163
G V I E K L ++ K+ I SIE D+ +L
Sbjct: 262 DRESVEEFSLRLSSLISKLGSYGVTINEEEAVFKYLHSVPPKYIQIALSIETMLDLSTL 320
>gi|23928439|gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
Length = 1892
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS LM + S K W +VE G P+ G D + +++ + +
Sbjct: 134 PTFNGEDYAMWSNLMRFHLTSLHKRIWDVVEYGVQVPSIGDEDYDTDE--VAQIEHFNSQ 191
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ + + ++ AKEIWD +K EG+ K ++ + + E ++ G
Sbjct: 192 AATILLASLSKEEYNKVQGLKNAKEIWDLLKTAHEGDELTKITKRETIEGELGRFHLRQG 251
Query: 130 EEDVKIVEKILRTLTEKFNDI 150
EE + + L+TL + ++
Sbjct: 252 EEPQDMYNR-LKTLVNQVRNL 271
>gi|77555715|gb|ABA98511.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 403
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 29/139 (20%)
Query: 36 WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI 95
W +V+ G+ + +D H L+L + + N LF ++ + D + +TA EI
Sbjct: 13 WSIVDVGFAITGTPLTEIDHHN-----LQL-NAQAMNALFNSLSQEEFDRVSNLETAYEI 66
Query: 96 WDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-----------------------D 132
W+ + K EG + K ++L L+ ++ET + E D
Sbjct: 67 WNKLAKIHEGASEYKDAKLHFLKIQYETFSILPHESVNDMYGRLNVIVNDLKGLGATYTD 126
Query: 133 VKIVEKILRTLTEKFNDIV 151
++ +K+LR L EK+ +V
Sbjct: 127 LEDAQKMLRALPEKYETLV 145
>gi|147857328|emb|CAN79188.1| hypothetical protein VITISV_033760 [Vitis vinifera]
Length = 902
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI-- 135
+DR + I + +AKEIW ++ EG +VK+S++ L +E MK E V++
Sbjct: 1 MDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINLLVHNYELFSMKENETIVEMIT 60
Query: 136 ---------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR+L K++ V +I+E+KD+ L E
Sbjct: 61 RFTDIVNGLEALGKTYKESEKVMKILRSLPSKWHTKVTAIQEAKDLTKLPME 112
>gi|357469755|ref|XP_003605162.1| hypothetical protein MTR_4g024880 [Medicago truncatula]
gi|355506217|gb|AES87359.1| hypothetical protein MTR_4g024880 [Medicago truncatula]
Length = 87
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 9 QPAIPRFVGHYDHWSMLMDNFM 30
QPAIPRF G+YD WS+LM+N +
Sbjct: 6 QPAIPRFGGYYDQWSILMENLL 27
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 23/62 (37%)
Query: 114 LQALRREFETLEMKSGE-----------------------EDVKIVEKILRTLTEKFNDI 150
L LR+EFE L M+ E E+V +VEKIL++LT KFN +
Sbjct: 26 LLTLRKEFEVLTMRECEAVDEYFAIVFAAANCMTAHGETTENVLVVEKILKSLTSKFNHV 85
Query: 151 VC 152
VC
Sbjct: 86 VC 87
>gi|32488438|emb|CAE03280.1| OSJNBa0072K14.13 [Oryza sativa Japonica Group]
Length = 901
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
DE + K+++ N + A+ + + + ++AK IWD ++ EG V++S+++ L+ +
Sbjct: 38 DENEHKNVQAANAILSALSGSEFNRVDDIESAKVIWDTLRNLHEGTDSVRESKVEILKGQ 97
Query: 121 FETLEMKSGEE------------------------DVKIVEKILRTLTEKFNDIVCSIEE 156
FE + GE D +V+K++R +T + + +V I E
Sbjct: 98 FERFVILDGESPSDMYDRLNKIVNEIKGFGSKDMIDEVVVKKMIRAITPRNSILVTIIRE 157
Query: 157 SKDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTS-------RKGSSNCHSTWKA 209
D +L+ + +L E +E + TTS KGSS+ H + K+
Sbjct: 158 RPDYKTLTPYDLLGHTLAHDMLKQESKEVIQFINQSSTTSIKKEDLALKGSSSKHYSNKS 217
>gi|77555250|gb|ABA98046.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1328
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW + +++ +++Y W V Y P + + A +K E ++ K N L
Sbjct: 19 FSHWCSRIQSYIMAEDYDIWRKVSHAYVIPEA---INTAAEKTAFE---QNCKAHNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---EDV 133
I + D + TA EIW A+ +G +K+ + ++E+ EMK GE + +
Sbjct: 73 GISYSDYDHVAHLQTAHEIWVALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEALDDYL 132
Query: 134 KIVEKILRTL 143
+ KIL L
Sbjct: 133 SMFNKILSDL 142
>gi|357451995|ref|XP_003596274.1| Brassinosteroid signaling positive regulator-related protein
[Medicago truncatula]
gi|355485322|gb|AES66525.1| Brassinosteroid signaling positive regulator-related protein
[Medicago truncatula]
Length = 447
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
K KD K Y+ + + + + I +T+ E+WD + K G+A+VKK + + F T
Sbjct: 350 KNKDGKTLFYIHKCVGNKVFEKIVDANTSMEVWDTLVKYDGGDAKVKKMD-EKIAYYFST 408
Query: 124 L-----EMKSGEEDVK---IVEKILRTLTEKFNDIVCSI 154
L +MK + + I+EKI R L +F+ IV +I
Sbjct: 409 LVTITNQMKQCSDIMTHQVIIEKISRPLRYQFDHIVVTI 447
>gi|24899448|gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711344|gb|ABF99139.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1394
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W + + M + W +E PA+G+ + D KD K K++L Q+
Sbjct: 28 NYTSWVIRVQAMMEDQGVWEAIE-----PAAGAAV-DPR---------KDKKAKSHLLQS 72
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK-----SGEED 132
+ +L + KK +AKE +K KF L + ++ S D
Sbjct: 73 LPEDLLMQVAKKRSAKE---TLKGKFGAMVMEPGETLDQYAGRITAMSVRHSVLGSTLTD 129
Query: 133 VKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV 169
+V+K+ T+ EKF +V IE+ ++D + E V
Sbjct: 130 AAMVKKLFDTVPEKFVSLVAGIEQFYNVDDMPFEEAV 166
>gi|50878403|gb|AAT85178.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51038241|gb|AAT94044.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1398
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWYSRMQSYIMAEDYDIWRKVSHPYVIPET---INTAAEKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I R + + TA EIW A+ +G +K+ + ++E+ EMK E
Sbjct: 73 GISRLDYNRVAHLQTAHEIWTALSNFHQGTNNIKELRRDLFKKEYIKFEMKPREA----- 127
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
L +FN I + + + +DS S +A + E+
Sbjct: 128 ---LDDYLSRFNKI---LSDLRSVDS-SYDANYPQSEI 158
>gi|284434685|gb|ADB85388.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 2007
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 38 LVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWD 97
LVE Y+ PA V+ + + T +++ + K KN L Q + R I +A +IW
Sbjct: 585 LVENPYEVPA---VITNNN---TADIE-ANAKAKNILLQGLSRNEFVRIANIKSANKIWT 637
Query: 98 AMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEES 157
+ EG+ VK ++E+ EMK GE + L ++FN I+ ++
Sbjct: 638 TLADYHEGSKSVKGVHQNQFKKEYSKFEMKPGES--------VDALFDRFNKIISDLQSV 689
Query: 158 KDIDSLSEEA 167
I S S+ A
Sbjct: 690 DVIYSDSDNA 699
>gi|147861017|emb|CAN82931.1| hypothetical protein VITISV_040771 [Vitis vinifera]
Length = 265
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 39/147 (26%)
Query: 30 MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK-------------DLKVKNYLFQ 76
M+ K W +E G+ S+ +DA + ELKLK + + +F
Sbjct: 1 MQGKRVWNSIEYGW----GPSLTLDAQGRSIGELKLKHEWDKXDNEGSKANARALFSIFN 56
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I KE W ++ +EG E+ S K+V
Sbjct: 57 GACTNEFPRIANCKRVKEAWVILQVTYEG-------------------ELISNS---KVV 94
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSL 163
KILR L +KF +V +IEESKDIDS+
Sbjct: 95 RKILRFLPKKFRPMVTTIEESKDIDSM 121
>gi|357451475|ref|XP_003596014.1| hypothetical protein MTR_2g065100 [Medicago truncatula]
gi|355485062|gb|AES66265.1| hypothetical protein MTR_2g065100 [Medicago truncatula]
Length = 284
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 22 WSMLMDNFMRS--KEYWGLVETGYDE----PASGSVLMDAHQKMTDELKLKDLKVKNYLF 75
W M N++ +E W ++E G D+ ++ H +L K K+ +
Sbjct: 12 WKTNMYNYIMGLDEELWDILEDGVDDLDLDEEGVAIDRKIHTPAQKKLYKKHHKINGIIA 71
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK-------- 127
+I RT + K TAK ++ ++ ++G+ VK+++ L +++ +MK
Sbjct: 72 ASIPRTEYMKMSDKSTAKAMFTSLCANYKGSKTVKEAKALMLVHQYKLFKMKDDESIEEM 131
Query: 128 --------SGEEDVKI-------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
SG + +K V KI+R+L ++ V +IEE+KD+++LS E
Sbjct: 132 YSRFQTLVSGMQILKKSYVASDHVSKIMRSLPSRWRPKVTAIEEAKDLNTLSVE 185
>gi|147810328|emb|CAN76159.1| hypothetical protein VITISV_012002 [Vitis vinifera]
Length = 268
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI-- 135
+DR + I + +AKEIW ++ EG +VK+S++ L +E MK E VK+
Sbjct: 1 MDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINLLVHNYELFSMKENETIVKMIT 60
Query: 136 ---------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR L K++ V +I+E+KD+ L E
Sbjct: 61 RFTDIVNGLEALGKTYKESEKVMKILRYLPSKWHTKVTAIQEAKDLTKLPME 112
>gi|8777581|dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W+ + N +++K+ G ++ +P + L K + + ++ +
Sbjct: 35 NYSEWAEELMNSLQAKQKLGFLDGTIPKPTTEPAL--------SSWKAANSMIIGWIRTS 86
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
ID TI T+ AK++WD++K++F V+K L+ E L K + V +
Sbjct: 87 IDPTIRSTVAFVSDAKDLWDSLKQRFSNGNGVRKQLLKD-----EILACKQDGQSVLVYY 141
Query: 138 KILRTLTEKFNDI----VCSIEESKDIDSLSEEAEVKE 171
L L E+ + C+ E + DI E+ +V +
Sbjct: 142 GRLTKLWEELQNYKTSRTCTCEAAPDIAKEREDDKVHQ 179
>gi|359490852|ref|XP_002269150.2| PREDICTED: uncharacterized protein LOC100251999 [Vitis vinifera]
Length = 693
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 23/89 (25%)
Query: 99 MKKKFEGNARVKKSQLQALRREFETLEMKS---------------------GEE--DVKI 135
+K++++G+ R+K Q+ L REFE +M+ G+E + KI
Sbjct: 229 LKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAAQLLSIADKVRLLGKEFSNEKI 288
Query: 136 VEKILRTLTEKFNDIVCSIEESKDIDSLS 164
V+KIL TL EK+ + S+E SKD+ ++S
Sbjct: 289 VQKILVTLPEKYEATISSLENSKDLSTIS 317
>gi|4006831|gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1200
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 24/104 (23%)
Query: 81 TILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE---------- 130
+++ + K T+K +WD ++ + G RVK+++L+ L EF+ L+MK E
Sbjct: 32 SLILQVGKLKTSKAVWDKIQSRNLGAERVKEAKLKTLMAEFDKLKMKDNETIDECAGRLS 91
Query: 131 -------------EDVKIVEKILRTL-TEKFNDIVCSIEESKDI 160
E+ K+V+K L++L T+K+ IV ++E+ D+
Sbjct: 92 EISTKSTSLGEDIEETKVVKKFLKSLPTKKYIHIVAALEQVLDL 135
>gi|18254418|gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays]
Length = 1657
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE G +S S ++ +E ++ +
Sbjct: 101 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVENGMKFDSSDSPML------INEQIHRNAQ 154
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + + D AK+IWD +K EGN ++++ + E M G
Sbjct: 155 ATTVLLASLCREEYNKVSGLDNAKQIWDTLKISHEGNDVTMLTKMELVEGELGRFAMIRG 214
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 215 EEPTQTYNR-LKTLVNKI 231
>gi|4416301|gb|AAD20306.1| gag protein [Zea mays]
Length = 892
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS LM + S K W +VE G P+ G D + +++ + +
Sbjct: 134 PTFNGEDYAMWSNLMRFHLTSLHKRIWDVVEYGVQVPSIGDEDYDTDE--VAQIEHFNSQ 191
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ + + ++ AKEIWD +K EG+ K ++ + + E ++ G
Sbjct: 192 AATILLASLSKEEYNKVQGLKNAKEIWDLLKTAHEGDELTKITKRETIEGELGRFRLRQG 251
Query: 130 EEDVKIVEKILRTLTEKFNDI 150
EE + + L+TL + ++
Sbjct: 252 EEPQDMYNR-LKTLVNQVRNL 271
>gi|53981360|gb|AAV24914.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 106
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 36 WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEI 95
W V Y P V+ A +K+ EL + K +N L I R+ D + TA EI
Sbjct: 8 WRKVSLPYVIP---EVINTAAEKIAFEL---NCKARNILLSGISRSDYDRVAYLQTAHEI 61
Query: 96 WDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
W A+ +G +K+ + ++E+ EMK GE
Sbjct: 62 WVALNNFHQGTNNIKELRRDLFKKEYIKFEMKPGE 96
>gi|357448887|ref|XP_003594719.1| hypothetical protein MTR_2g033890 [Medicago truncatula]
gi|355483767|gb|AES64970.1| hypothetical protein MTR_2g033890 [Medicago truncatula]
Length = 57
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 132 DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D+ I++ ILRTL E F D+V SIEESK+ID +S
Sbjct: 3 DITIIDNILRTLIEIFADVVVSIEESKEIDEVS 35
>gi|147783659|emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
Length = 845
Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKMTDELKL 65
S P +F G +Y W+ + F++ K+ WG ++ T ++P++ D + +
Sbjct: 3 SAPLCVKFTGTNYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQDV--GFSPSWAV 60
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
D ++ ++L +++ I+ +R +A+ +W +KK + + ++ QL+
Sbjct: 61 LDARIMSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLE 110
>gi|38605857|emb|CAD41593.3| OSJNBb0034G17.15 [Oryza sativa Japonica Group]
Length = 768
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 26 MDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTIL 83
M +++ ++ Y W V Y P V+ A +K+ EL + K +N L I +
Sbjct: 290 MQSYIMAENYDIWRKVSLPYVIP---EVINTAAEKIAFEL---NCKARNILLSGISCSDY 343
Query: 84 DTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTL 143
D + TA EIW A+ +G +K+ + ++E+ EMK GE L
Sbjct: 344 DRVAHLQTAHEIWVALNNFHQGTNNIKEFRRDLFKKEYIKFEMKPGEA--------LDDY 395
Query: 144 TEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
+FN I + + + +DS S +A + E+
Sbjct: 396 LSRFNKI---LSDLRSVDS-SYDANYPQSEI 422
>gi|99866732|gb|ABF67945.1| putative Opie4 gag protein [Zea mays]
Length = 792
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE G +S S ++ +E ++ +
Sbjct: 102 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVENGMKFDSSDSPML------INEQIHRNAQ 155
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + + D AK+IWD +K EGN ++++ + E M G
Sbjct: 156 ATTVLLASLCREEYNKVSGLDNAKQIWDTLKISHEGNDITMLTKMELVEGELGRFAMIRG 215
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 216 EEPTQTYNR-LKTLINKI 232
>gi|99866697|gb|ABF67913.1| Opie2 gag protein [Zea mays]
gi|338808424|gb|AEJ07926.1| Opie2 gag protein [Zea mays subsp. mexicana]
Length = 798
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE G +S S ++ +E ++ +
Sbjct: 102 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVENGMKFDSSDSPML------INEQIHRNAQ 155
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + + D AK+IWD +K EGN ++++ + E M G
Sbjct: 156 ATTVLLASLCREEYNKVSGLDNAKQIWDTLKISHEGNDITMLTKMELVEGELGRFAMIRG 215
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 216 EEPTQTYNR-LKTLINKI 232
>gi|14091844|gb|AAK53847.1|AC016781_1 Putative copia-like retroelement [Oryza sativa Japonica Group]
Length = 381
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 33/155 (21%)
Query: 36 WGLVETGY--DEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAK 93
W +VE GY +P + K DE + K+ + N + A+ + + + ++AK
Sbjct: 11 WRIVEKGYVLQKPEDPT-------KEDDENEHKNAQAANAILSALSGSEFNRVDGIESAK 63
Query: 94 EIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE---------------------- 131
IWD ++ EG V++S+++ L+ +FE M GE
Sbjct: 64 VIWDTLRNLHEGTDSVRESKVEILKGQFERFVMLDGESPSDMYDRLSKIVNEIKGLGSKD 123
Query: 132 --DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +V+K++R +T + + +V I E D +L+
Sbjct: 124 MTDEVVVKKMVRAITPRNSTLVTIIRERLDNKTLT 158
>gi|22748369|gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431391|gb|AAP53179.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1299
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 23/103 (22%)
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
N LF ++ + D + +TA EIW+ + + EG + K ++L L+ ++ET M E
Sbjct: 34 NALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQYETFSMLPHES 93
Query: 132 -----------------------DVKIVEKILRTLTEKFNDIV 151
D++I +K+LR L EK+ +V
Sbjct: 94 VNDMYGRLNVIVNDLKGLGANYTDLEIAQKMLRALPEKYETLV 136
>gi|147816020|emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]
Length = 887
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI- 135
A+DR + I + +AKEIW ++ EG +VK+S++ L +E MK E V++
Sbjct: 60 AMDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINLLVHNYELFSMKETETIVEMI 119
Query: 136 ----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR+L K++ V +I+ +KD+ L E
Sbjct: 120 TRFTDIVNGLEALGKTYKESEKVMKILRSLPSKWHTKVTAIQGAKDLTKLPME 172
>gi|108707709|gb|ABF95504.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1196
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA EIW+A+ +G +K+ + ++E+ E
Sbjct: 212 QNYKARNILLSGISRSDYDRVAHLRTAHEIWNALSNFHQGTNNIKELRRDLFKKEYIKFE 271
Query: 126 MKSGE 130
MK GE
Sbjct: 272 MKPGE 276
>gi|50878355|gb|AAT85130.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1362
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G HY W M + S W +V TG D P L +++ ++ +
Sbjct: 53 PQFDGTHYAAWKHKMKLHLISLHPSIWKVVCTGVDVPHDDMELTSEQEQLIH----RNAQ 108
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + A+ + + + AKEIWD ++ EG+ V++++++ L M
Sbjct: 109 ASNAILSALSPEEFNKVDGLEEAKEIWDTLQLAHEGSPAVREAKIELLEGRLGRFVMGDK 168
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+++LR + +V I E KD L+
Sbjct: 169 ETPQEMYDRMMILVNKIKGLGSEDMTNHFVVKRLLRAFGPRNPTLVSMIRERKDFKRLT 227
>gi|19920091|gb|AAM08523.1|AC068654_25 Putative retroelement [Oryza sativa Japonica Group]
gi|31429833|gb|AAP51828.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
+ + +N L I R+ D + TA EIW A+ +G +K+ + ++E+ EM
Sbjct: 11 EFEARNILLSGISRSDYDRVAHLQTAHEIWTALSNFLQGTNNIKELRRDLFKKEYIKFEM 70
Query: 127 KSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDIDSLSEE 166
K GE L +FN I+ S++ S D + L E
Sbjct: 71 KPGEA--------LDDYLSRFNKILSDLRSVDSSYDANYLQSE 105
>gi|297729203|ref|NP_001176965.1| Os12g0503300 [Oryza sativa Japonica Group]
gi|255670325|dbj|BAH95693.1| Os12g0503300 [Oryza sativa Japonica Group]
Length = 1007
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K N L I R+ D + TA EIW+A+K +G + +KK + + L +++ E
Sbjct: 61 QNCKAHNILLSGICRSDFDRVSHFQTAHEIWNALKNFHQGTSNIKKLR-RDLFKKYIKFE 119
Query: 126 MKSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDID 161
MK GE L +FN I+ S++ S D++
Sbjct: 120 MKPGEA--------LDDYLSRFNKILSDLRSVDSSYDVN 150
>gi|284434587|gb|ADB85323.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 727
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
K KN L+ + R D I +TA EIW ++ EG++++K+ + + E+ EM+
Sbjct: 78 KAKNLLYAGLGRQEYDKICNLETAHEIWHTLETYHEGSSQIKQVRQTVFKSEYNKFEMRL 137
Query: 129 GE 130
GE
Sbjct: 138 GE 139
>gi|297722815|ref|NP_001173771.1| Os04g0176900 [Oryza sativa Japonica Group]
gi|255675182|dbj|BAH92499.1| Os04g0176900 [Oryza sativa Japonica Group]
Length = 812
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 30 MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKD-------LKVKNYLFQAIDRTI 82
M S W + + P VL + ++ DEL++ ++ N L I R+
Sbjct: 321 MASIGLWCIQVSPSSRPTMSKVL-EMFERSADELEIPPKHCFYSAIQAHNILLSGISRSD 379
Query: 83 LDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
D + TA EIW+A+ G +K+ + ++E+ EMK GE
Sbjct: 380 YDRVAHFQTAHEIWNALSNFHRGTNNIKELRRDIFKKEYIKFEMKPGE 427
>gi|147812137|emb|CAN70292.1| hypothetical protein VITISV_041258 [Vitis vinifera]
Length = 960
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD---EPASGSVLMDAH 56
M E +FS A F G +Y W++ M + + W VE Y+ P++ ++ H
Sbjct: 1 MEVESSFSSIAPLVFDGDNYRFWAIRMKTHLDVMDLWEAVEEDYEIIPLPSNPTMAQIKH 60
Query: 57 QKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
K E K++ KVK L + + ++E + R++ Q+
Sbjct: 61 HK---ERKIRKSKVKACLICCFFHNL--------------HSHHTEYEEDERIRGLQVLN 103
Query: 117 LRREFETLEMK---------SGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
L R FE +M+ S D +IVEKIL T+ E+F + ++E +KD+ +
Sbjct: 104 LIRNFELQKMEAESIKELLGSSLLDSRIVEKILVTVLERFEASITALENTKDLSMI 159
>gi|147765887|emb|CAN64520.1| hypothetical protein VITISV_030941 [Vitis vinifera]
Length = 1527
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 23/113 (20%)
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI- 135
A+DR + I + AKEIW ++ E +VK+S++ L +E MK E V++
Sbjct: 60 AMDRNEYNRICQCKLAKEIWRLLEITHERTNQVKESKINLLVHNYELFSMKENETIVEMI 119
Query: 136 ----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR+L K++ V +I+E+KD+ L E
Sbjct: 120 TRFTDIVNGLEALEKTYKESENVMKILRSLPSKWHTKVTAIQEAKDLTKLPME 172
>gi|99866719|gb|ABF67933.1| Opie3 gag protein [Zea mays]
Length = 796
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +V++G +S S + +E K+ +
Sbjct: 105 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVDSGMHFNSSDSPIF------INEQIHKNAQ 158
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + + D AK+IWD +K EGN ++++ + E M G
Sbjct: 159 ATTVLLASLCRDEYNKVSGLDNAKQIWDTLKISHEGNDATLLTKMELVEGELGRFAMIRG 218
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + ++ L+TL K
Sbjct: 219 EEPTQTYKR-LKTLINKI 235
>gi|57834061|emb|CAD40307.2| OSJNBb0013O03.2 [Oryza sativa Japonica Group]
Length = 1028
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKL-KDLKVKNYLF 75
+ HW M +++ +++Y W V Y V+ +A T++ ++ K +N L
Sbjct: 19 FSHWCSRMQSYIMAEDYDIWRKVSHPY-------VIPEAINTTTEKTAFEQNCKARNILL 71
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
I R+ D + TA EIW + + +K+ + ++E+ EMK GE
Sbjct: 72 SGISRSDYDRVAHLQTAHEIWTTLSNFHQETNNIKELRRDLFKKEYIKFEMKPGE 126
>gi|147794627|emb|CAN73512.1| hypothetical protein VITISV_028522 [Vitis vinifera]
Length = 274
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI- 135
A+DR + I + + KEIW ++ EG +VKKS++ L +E MK E V++
Sbjct: 30 AMDRNEYNRICQCKSTKEIWKLLEITHEGTNQVKKSKINLLVHSYELFFMKENETIVEMI 89
Query: 136 ----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR L+ K++ V +I+E+K++ L E
Sbjct: 90 TRFTDIVNGLEALGKTYKESEKVMKILRPLSSKWHTNVTAIQEAKNLTKLPME 142
>gi|338808428|gb|AEJ07930.1| Opie3 gag protein [Zea mays subsp. mexicana]
Length = 793
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE G +S S ++ +E ++ +
Sbjct: 102 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVENGMKFDSSDSPML------INEQIHRNAQ 155
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + + D AK+IWD +K EGN ++++ + E M G
Sbjct: 156 ATTVLLASLCREEYNKVSGLDNAKQIWDTLKISHEGNDITMLTKMELVEGELGRFAMIRG 215
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 216 EEPTQTYNR-LKTLINKI 232
>gi|108708754|gb|ABF96549.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1071
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA EIW+A+ +G +K+ + ++E+ E
Sbjct: 69 QNCKARNILLSGISRSDYDRVAHLRTAHEIWNALSNFHQGTNNIKELRRDLFKKEYIKFE 128
Query: 126 MKSGE 130
MK GE
Sbjct: 129 MKPGE 133
>gi|37991852|gb|AAR06298.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1086
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA EIW+A+ +G +K+ + ++E+ E
Sbjct: 69 QNCKARNILLSGISRSDYDRVAHLRTAHEIWNALSNFHQGTNNIKELRRDLFKKEYIKFE 128
Query: 126 MKSGE 130
MK GE
Sbjct: 129 MKPGE 133
>gi|147828735|emb|CAN75182.1| hypothetical protein VITISV_015996 [Vitis vinifera]
Length = 869
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKI------LRTLT 144
TAKE D +K +++G+ R+K+ Q+ L+R+FE+L M+ E K ++I +R+L+
Sbjct: 50 TAKEARDKLKLEYQGSDRIKQMQVLNLKRDFESLTMQEDETITKYSDRIALIVNKIRSLS 109
Query: 145 EKF 147
E+F
Sbjct: 110 EEF 112
>gi|3645898|gb|AAC49501.1| Gag [Zea mays]
Length = 602
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE G +S S ++ +E ++ +
Sbjct: 101 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVENGMKFDSSDSPML------INEQIHRNAQ 154
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + + D AK+IWD ++ EGN ++++ + E M G
Sbjct: 155 ATTVLLASLCREEYNKVSGLDNAKQIWDTLRISHEGNDITMLTKMELVEGELGRFAMIRG 214
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 215 EEPTQTYNR-LKTLINKI 231
>gi|359484000|ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854333 [Vitis vinifera]
Length = 1689
Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKMTDELKL 65
S P +F G +Y W+ + F++ K+ WG ++ T ++P++ D + +
Sbjct: 3 SAPLCVKFTGTNYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQDV--GFSPSWAV 60
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
D ++ ++L +++ I+ +R +A+ +W +KK + + ++ QL+
Sbjct: 61 LDARIMSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLE 110
>gi|357516265|ref|XP_003628421.1| hypothetical protein MTR_8g057760 [Medicago truncatula]
gi|355522443|gb|AET02897.1| hypothetical protein MTR_8g057760 [Medicago truncatula]
Length = 457
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVE--TGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
Y W+ + F+ K+ WG V+ T E V AH K +KD +V +++
Sbjct: 18 YSTWAFHFEIFVTGKDLWGHVDGSTPVPEKEKNKV---AHAKWV----VKDAQVMSWVLG 70
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
++D I+ +R TA +W+ +KK + N ++ QL+
Sbjct: 71 SVDPNIVLNLRAYKTAATMWNYLKKVYNQNNAARRFQLE 109
>gi|338808393|gb|AEJ07898.1| Opie3 putative gag protein [Zea mays subsp. mexicana]
Length = 800
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + S W +VE+G ++ S + +E K+ +
Sbjct: 105 PHFDGEDYGFWSHKMRTHLFSLHPSIWEIVESGMHFDSTDSPMF------INEQIHKNAQ 158
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + + D AK+IWD +K EGN ++++ + E M G
Sbjct: 159 ATTVLLASLCRDEYNKVSGLDNAKQIWDTLKISHEGNDITMLTKMELVEGELGRFAMIRG 218
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 219 EEPTQTYNR-LKTLVNKI 235
>gi|116310262|emb|CAH67269.1| OSIGBa0145C12.6 [Oryza sativa Indica Group]
Length = 1313
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWYSRMQSYIMAEDYDIWRKVSHTYVIPEA---INTAAKKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I + D + A EIW A+ +G +K + ++E+ EMK G
Sbjct: 73 GISCSDYDRVAHLQNAHEIWVALSNFHQGTNNIKDLRRDLFKKEYIKFEMKPG------- 125
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
K L +FN I + + + +DS S +A + E+
Sbjct: 126 -KALDDYLSRFNKI---LSDFRSVDS-SYDANYPQSEI 158
>gi|77554148|gb|ABA96944.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 951
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 26 MDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLK---DLKVKNYLFQAIDR 80
M +++ +++Y W V Y P Q TD LKL+ + K +N L I R
Sbjct: 127 MQSYIMAEDYDIWRKVSHPYVIP---------DQINTDALKLEFEHNCKARNILLSGISR 177
Query: 81 TILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKIL 140
+ D + TA EIW A+ +G +K+ + ++E+ EMK E L
Sbjct: 178 SDYDCVAHLQTAHEIWVALNNFHQGTNNIKELRRDLFKKEYIKFEMKPREA--------L 229
Query: 141 RTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
+FN I+ + + +DS S +A + E+
Sbjct: 230 DDYLSRFNKILSDL---RSVDS-SHDANYPQSEI 259
>gi|224161794|ref|XP_002338375.1| predicted protein [Populus trichocarpa]
gi|222872043|gb|EEF09174.1| predicted protein [Populus trichocarpa]
Length = 127
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 14/112 (12%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYD-----EPASGSVLMDAHQKMTD----- 61
P+F G +YD W + M+ + + + W ++E G E A+GS ++ + T
Sbjct: 14 PQFNGTNYDFWVVKMETLLIAFDLWDVIEVGIQSHQSPEVANGSGDEESEAEQTTLQTPT 73
Query: 62 ---ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVK 110
E K+K+ K + + A+ + IR + TAK W+ + ++F G+ +V+
Sbjct: 74 TSREDKIKNAKALSLIQGALTDDLFPRIRNEKTAKGAWEILSREFRGDKKVR 125
>gi|20042893|gb|AAM08721.1|AC116601_14 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
Length = 1018
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D V + + + +L ++ K T K W+A+K G RV+++ Q LRREF
Sbjct: 142 DRLVLAAILRVVPPEMLRSLSTKRTVKSAWEAIKTVCVGTRRVREANEQLLRREFADARF 201
Query: 127 KSGEE----DVKI--VEKILRTL---TEKFNDIVCSIEESKDIDSLS 164
K GE ++I + +RTL + + I SIE DI LS
Sbjct: 202 KDGENIDDFSMRIFGIANSIRTLGGDLPEIDVIAISIETLLDIRDLS 248
>gi|110288556|gb|AAP51910.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1012
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D V + + + +L ++ K T K W+A+K G RV+++ Q LRREF
Sbjct: 142 DRLVLAAILRVVPPEMLRSLSTKRTVKSAWEAIKTVCVGTRRVREANEQLLRREFADARF 201
Query: 127 KSGEE----DVKI--VEKILRTL---TEKFNDIVCSIEESKDIDSLS 164
K GE ++I + +RTL + + I SIE DI LS
Sbjct: 202 KDGENIDDFSMRIFGIANSIRTLGGDLPEIDVIAISIETLLDIRDLS 248
>gi|242071893|ref|XP_002451223.1| hypothetical protein SORBIDRAFT_05g026020 [Sorghum bicolor]
gi|241937066|gb|EES10211.1| hypothetical protein SORBIDRAFT_05g026020 [Sorghum bicolor]
Length = 460
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 25/100 (25%)
Query: 89 KDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------------------ 130
K + KE W+A+K G RVK+ Q L EFE++ K GE
Sbjct: 34 KKSFKEAWEAIKTMRLGADRVKEVDAQKLLAEFESIAFKLGEAIDDFAVRISKLASDLRG 93
Query: 131 ------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+D ++V K LR + ++N + +IE S D+ +LS
Sbjct: 94 LGETSVDDTRVV-KFLRVVPSRYNQVAVAIEMSSDLKTLS 132
>gi|357458377|ref|XP_003599469.1| hypothetical protein MTR_3g033820 [Medicago truncatula]
gi|355488517|gb|AES69720.1| hypothetical protein MTR_3g033820 [Medicago truncatula]
Length = 267
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 30/182 (16%)
Query: 34 EYWGLVETGYDEPASGSVLMDAHQKMTD---ELKLKDLKVKNYLFQAIDRTILDTIRKKD 90
E W ++E G + + +T+ ++ K +V+ L +AI + I K
Sbjct: 63 ELWDIIEDGIEIAVDKEGMARDRNSLTEAEKKIYRKHHRVRGSLVEAIPYSKYVKIVNKS 122
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM----------------KSGEEDVK 134
+AK I++++ +EGN +V +++ L +++ M +SG + +K
Sbjct: 123 SAKTIFESLCSTYEGNQQVTEAKANHLVNQYKLFRMSEYEYIKTMYSRFQLIQSGLQVLK 182
Query: 135 -------IVEKILRTLTEKFNDIVCSIEESKDIDSLSEE---AEVKEDEVKTLLGAEEEE 184
V+KILR+ +F + +I E+KD+D+L E + +K E++ L+G + E
Sbjct: 183 KRYTVSDHVKKILRSHPTRFRTNITAIHEAKDLDTLRLEDLISSLKSHEIE-LVGDKSAE 241
Query: 185 EA 186
++
Sbjct: 242 KS 243
>gi|338808441|gb|AEJ07942.1| Opie1 putative gag protein [Zea diploperennis]
Length = 790
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE+G ++ S + +E K+ +
Sbjct: 103 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVESGMKFDSTDSPMF------INEQIHKNAQ 156
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + D AK+IWD +K EGN ++++ + E M G
Sbjct: 157 ATTVLLASLCRDEYHKVSGLDNAKQIWDTLKISHEGNDVTMLTKMELVEGELGRFAMIRG 216
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 217 EEPTQTYNR-LKTLVNKI 233
>gi|242024106|ref|XP_002432471.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517904|gb|EEB19733.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 535
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 50 SVLMDAHQKMTDELKLKDLKVKNYL-FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNAR 108
S L H + D+ +L K + L F + +++D +R D KE+ D ++KF G +
Sbjct: 355 SPLPQYHPHLLDDPELIAGKHRTLLTFTSYMTSVIDYVRPADLKKELNDKFREKFPG-VK 413
Query: 109 VKKSQLQALRREFETL-EMKSGEEDVKIVEK-------ILRTLTEKFNDIVCS 153
+ S+L++L+RE + + + +SG + V + + ILR L K N +C+
Sbjct: 414 LTLSKLRSLKREMKKIAKTESGLDLVAVAQSYVYFEKLILRNLINKENRKLCA 466
>gi|38346205|emb|CAD39343.2| OSJNBa0094O15.12 [Oryza sativa Japonica Group]
Length = 1739
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 23/103 (22%)
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
N LF ++ + D + +TA EIW+ + + EG + K ++L L+ ++ET M E
Sbjct: 16 NALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGISEYKDAKLHFLKIQYETFSMLPHES 75
Query: 132 -----------------------DVKIVEKILRTLTEKFNDIV 151
D+++ +K+LR L EK+ +V
Sbjct: 76 VNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLV 118
>gi|38346085|emb|CAE54547.1| OSJNBa0084K01.25 [Oryza sativa Japonica Group]
gi|116309863|emb|CAH66898.1| OSIGBa0099L20.13 [Oryza sativa Indica Group]
Length = 440
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 23/103 (22%)
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
N LF ++ + D + +TA EIW+ + + EG + K ++L L+ ++ET M E
Sbjct: 2 NALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQYETFSMLPHES 61
Query: 132 -----------------------DVKIVEKILRTLTEKFNDIV 151
D+++ +K+LR L +K+ +V
Sbjct: 62 VNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPKKYETLV 104
>gi|357167637|ref|XP_003581260.1| PREDICTED: uncharacterized protein LOC100824567 [Brachypodium
distachyon]
Length = 395
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
+ K +NY+ Q R+ D + +A EIW+A+ EG+ VK+ + + E+ EM
Sbjct: 39 NYKARNYIIQGPQRSDFDRVAHLASAHEIWNALCSYHEGSNSVKEVRQDMYKTEYMRFEM 98
Query: 127 KSGE 130
+GE
Sbjct: 99 NTGE 102
>gi|147767961|emb|CAN77916.1| hypothetical protein VITISV_031396 [Vitis vinifera]
Length = 874
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 41/166 (24%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKM 59
MTS+ + + A F G +Y W + M+ ++ + + W +V Y+ P + A K+
Sbjct: 1 MTSKASLNALAPSVFDGINYQVWDVCMEAYLDASDLWEVVSEEYEVPPLSNNPTMAQIKL 60
Query: 60 TDELKLKDLKVK-NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALR 118
+E++ + K K NY +L + K ++ L
Sbjct: 61 HNEMRQRKSKAKANY-----SDKLLSIVNK-------------------------VRLLG 90
Query: 119 REFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+F D +IV+KI T+ EKF I+ S+E SKD+ S++
Sbjct: 91 TDFS---------DSRIVQKIFITVPEKFETIISSLENSKDVSSIT 127
>gi|11994263|dbj|BAB01446.1| unnamed protein product [Arabidopsis thaliana]
Length = 534
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVK-NYLFQA 77
Y+HWS + + + W +V+ G + + A K+ D + ++ ++ N +
Sbjct: 15 YEHWSPIAETRLVENGVWDVVQNGVSPNPTTDPEVAATIKVEDLTQWRNRMIEDNKALKI 74
Query: 78 IDRTILDTIRKKD----TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-- 131
+ + D++ +K ++KE+WD +KK GN + +L+ L ++ E L M GE
Sbjct: 75 MQSALPDSVFRKTISVASSKELWDLLKK---GNDNEEAKKLRRLEKQLENLTMYEGERMK 131
Query: 132 ---------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
D K++ K+L +L ++D + ++E + L+ +K
Sbjct: 132 SYLKRVEKIIEEFFVWGNPISDEKVIAKLLTSLPRPYDDSITVLKEFMTLPDLTHRDLLK 191
Query: 171 EDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSN 202
E + G+ + + + RK S+
Sbjct: 192 AFE---MFGSNPKTMPQELMKFINILRKAHSD 220
>gi|57834142|emb|CAD41183.2| OSJNBb0002J11.7 [Oryza sativa Japonica Group]
Length = 1081
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ +++Y W V Y P + + A +K E ++ K +N L
Sbjct: 19 FSHWYSRMQSYIMAEDYDIWRKVSHTYVIPEA---INTAAKKTAFE---QNCKARNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
I + D + A EIW A+ +G +K + ++E+ EMK G
Sbjct: 73 GISCSDYDRVAHLQNAHEIWVALSNFHQGTNNIKDLRRDLFKKEYIKFEMKPG------- 125
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
K L +FN I + + + +DS S +A + E+
Sbjct: 126 -KALDDYLSRFNKI---LSDFRSVDS-SYDANYPQSEI 158
>gi|357504285|ref|XP_003622431.1| hypothetical protein MTR_7g037630 [Medicago truncatula]
gi|355497446|gb|AES78649.1| hypothetical protein MTR_7g037630 [Medicago truncatula]
Length = 640
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 23/120 (19%)
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK-- 127
++ L +AI + + +K TAK + ++ +EG+ +V++++ L +E +MK
Sbjct: 96 IRGALVKAIPKAEYMKMSEKSTAKSMLASLCANYEGSKKVRETKALMLVHLYELFKMKDD 155
Query: 128 --------------SGEEDVKI-------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
SG + +K V KILR+L ++ +V +IEE+KD+++LS E
Sbjct: 156 ESIEQMYSRFQTLVSGLQILKKSYEASDHVSKILRSLLARWRPMVTTIEEAKDLNTLSVE 215
>gi|30017518|gb|AAP12940.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
gi|108708643|gb|ABF96438.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
Length = 1975
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLK-DL 68
P F G +Y W + M +++ + W +V+ G+ + H D L+ +
Sbjct: 773 PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF-------AITGTHLTGIDHRNLQLNA 825
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
+ N LF + + D + +TA E W+ + + EG + ++L L+ ++ET M
Sbjct: 826 QAMNALFNCLSQEECDRVSNLETAYENWNKLAEIHEGTSEYNDAKLHFLKIQYETFSMLP 885
Query: 129 GE 130
E
Sbjct: 886 HE 887
>gi|147805299|emb|CAN78267.1| hypothetical protein VITISV_006709 [Vitis vinifera]
Length = 980
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 1 MTSEGNFSQPAIPRFVGHYDHWSM--LMDNFMRSKEY-WGLVETGYDEPAS--GSVLMDA 55
+ +G + I +F+ + + + L + EY W ++E G P + VL+
Sbjct: 163 IPPQGGIKKVQIRKFIKGPNGYKIETLGRLLIIGNEYVWDVIEDGLTFPTTLVDGVLVSK 222
Query: 56 HQKMTDELKLKDL----KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKK 111
++ +EL ++ KV L A+DR + I + +AKEIW ++ EG +VK
Sbjct: 223 PKQEWNELDKRNFQLNAKVLFTLQCAMDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKW 282
Query: 112 SQLQALRREFETLEMKSGEEDVKIVEKI------LRTLTEKFNDI-----VCSIEESKDI 160
S++ L +E MK E V+++ + L+ L + + + V +I+E KD+
Sbjct: 283 SKMNFLVHNYELFSMKENETIVEMITRFTDIVNGLKALGKSYKESKKHTKVIAIQEVKDL 342
Query: 161 DSLSEE 166
L E
Sbjct: 343 TKLPME 348
>gi|108708750|gb|ABF96545.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1922
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G HY W M + S W +V TG D P L +++ ++ +
Sbjct: 52 PHFDGTHYAAWKHKMKLHIISLHPSIWKVVCTGIDVPHDDMELTSEQEQLIH----RNDQ 107
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
V N + A+ + + + + AK IWD ++ EG+ V++++++ L M
Sbjct: 108 VSNAILSALSPEEFNKVDRLEEAKAIWDTLQLAHEGSPAVREAKIELLEGRLGRFVMDDK 167
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+++LR + +V I E KD L+
Sbjct: 168 ETPQEMYDRMMILVNKIKGLGSEDMTNHFVVKRLLRAFGPRNPTLVSMIHERKDFKRLT 226
>gi|30017555|gb|AAP12977.1| putative copia-type pol polyprotein [Oryza sativa Japonica Group]
Length = 1896
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G HY W M + S W +V TG D P L +++ ++ +
Sbjct: 52 PHFDGTHYAAWKHKMKLHIISLHPSIWKVVCTGIDVPHDDMELTSEQEQLIH----RNDQ 107
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
V N + A+ + + + + AK IWD ++ EG+ V++++++ L M
Sbjct: 108 VSNAILSALSPEEFNKVDRLEEAKAIWDTLQLAHEGSPAVREAKIELLEGRLGRFVMDDK 167
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+++LR + +V I E KD L+
Sbjct: 168 ETPQEMYDRMMILVNKIKGLGSEDMTNHFVVKRLLRAFGPRNPTLVSMIHERKDFKRLT 226
>gi|22953963|gb|AAN11196.1| Putative retroelement [Oryza sativa Japonica Group]
gi|110288579|gb|ABG65897.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1148
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 85 TIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
TI +K TAKE WDA+ G+ RV+K+ Q LRR+F+ + GE
Sbjct: 729 TIAEKATAKEAWDAITTMRVGDDRVRKTVAQNLRRKFDLVTFNVGE 774
>gi|147783767|emb|CAN70258.1| hypothetical protein VITISV_024387 [Vitis vinifera]
Length = 530
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 23/85 (27%)
Query: 103 FEGNARVKKSQLQALRREFETLEMKSGEE-----------------------DVKIVEKI 139
+ G+ R ++ Q+ L+R+FE L MK E D ++VEK+
Sbjct: 2 YLGSDRTRQMQILNLKRQFEVLRMKDNESIKDYIDRLMEVVNKIRLLGEDLIDQRVVEKV 61
Query: 140 LRTLTEKFNDIVCSIEESKDIDSLS 164
L +L E+F + S+E+SKD+ +S
Sbjct: 62 LVSLLERFESKISSLEDSKDLTKIS 86
>gi|50399933|gb|AAT76321.1| putative integrase [Oryza sativa Japonica Group]
gi|108709546|gb|ABF97341.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1425
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA EIW A+ +G +K+ + L++E+ E
Sbjct: 125 QNCKARNILLSGISRSDYDRVAHLQTAHEIWIALSNFHQGTNNIKELRRDLLKKEYIKFE 184
Query: 126 MKSGE 130
MK GE
Sbjct: 185 MKLGE 189
>gi|147771204|emb|CAN65237.1| hypothetical protein VITISV_018674 [Vitis vinifera]
Length = 563
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 109 VKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
V K +L+ R E E + + K+V KILR+L E+F V +IEESKD+DSL
Sbjct: 29 VIKPKLEWDRSENEATLLGEPIPNSKVVRKILRSLPERFKAKVTAIEESKDVDSL 83
>gi|284434664|gb|ADB85374.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 325
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 108 RVKKSQLQALRREFETLEMKSGE--EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
RV+++ Q LR+EFE +E G E+ K+V+K LR + ++ + SIE D+ +L
Sbjct: 9 RVREANAQKLRKEFEDIEFNDGNTLEEEKVVKKFLRVVPPRYTQVAISIETLLDLSTL 66
>gi|147843192|emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEP----ASGSVLMDAH---QKMTDELKLKDLKV 70
+Y W M N +R + G ++ P ASGS L A+ QK KD+ +
Sbjct: 30 NYLAWKMQFLNLLRGHDLMGFIDGTEACPPKHTASGS-LNPAYVVWQK-------KDVCL 81
Query: 71 KNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
++ ++ ++ TI +T+K++W A++ +F +R S++ L+R+ +TL
Sbjct: 82 LGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSR---SRISHLKRQLQTL 132
>gi|33113970|gb|AAP94592.1| retrotransposon Opie-2 [Zea mays]
Length = 1512
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + S W +VE+G +S S + +E K+ +
Sbjct: 102 PHFDGEDYGFWSHKMRTHLFSLHPSIWEIVESGMKFDSSDSPVF------INEQIHKNAQ 155
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + D AK+IWD +K EGN ++++ + E M G
Sbjct: 156 ATTVLLASLCRDEYHKVSGLDNAKQIWDTLKISHEGNDVTLLTKMELVEGELGRFAMIRG 215
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 216 EEPTQTYNR-LKTLINKI 232
>gi|147801656|emb|CAN61346.1| hypothetical protein VITISV_040686 [Vitis vinifera]
Length = 523
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 38/199 (19%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDA-----HQ 57
+F++ F+G Y +W M F++S + W ++ D+P S L+D +
Sbjct: 12 SFAKNRPQFFMGTDYPYWKTKMTWFLQSTDLDIWDFIK---DDPIFLSKLVDGVMVSKPK 68
Query: 58 KMTDELKLKDLKVKN---YLFQ-AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQ 113
+ DE ++ ++ Y Q ++DR + I + +AK IW ++ EG +VK+S+
Sbjct: 69 QERDERDRRNFQLNAKTVYTLQCSMDRNEYNRICQCKSAKGIWRLLEJTHEGTNQVKESK 128
Query: 114 LQALRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFNDI 150
+ L +E K E V++ V KILR+L K++
Sbjct: 129 INLLVHSYEWFFRKENETIVEMITRFTDIVNGLETLGKAYKESENVMKILRSLPSKWHKK 188
Query: 151 VCSIEESKDIDSLSEEAEV 169
V +I+E+KD+ L E +
Sbjct: 189 VTAIQEAKDLTKLHIEGLI 207
>gi|108708393|gb|ABF96188.1| hypothetical protein LOC_Os03g25570 [Oryza sativa Japonica Group]
Length = 211
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 44/173 (25%)
Query: 1 MTSEGNFSQPAIPRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQ 57
M++E N A P F G +Y W + M +++ + W +V+ G+ +G+
Sbjct: 1 MSNEVNHVGKA-PMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--AITGT------- 50
Query: 58 KMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
L ++ N F A + D + +TA +IW+ + + EG + K +QL L
Sbjct: 51 ------PLTEIVHHNLQFNAQEE--FDRVSNLETAYDIWNKLAEIHEGTSEYKDAQLHFL 102
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKF 147
+ ++ET M E D+++ +K+LR L EK
Sbjct: 103 KIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKM 155
>gi|17082478|gb|AAL35395.1| Opie2a gag protein [Zea mays]
gi|168251074|gb|ACA21857.1| Opie2a gag protein [Zea mays]
Length = 794
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE+G +S S + +E ++ +
Sbjct: 105 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVESGMKFDSSDSPMF------INEQIHRNAQ 158
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + D AK+IWD +K EGN ++++ + E M G
Sbjct: 159 ATTVLLASLCRDEYHKVSGLDNAKQIWDTLKISHEGNDVTLLTKMELVEGELGRFAMIRG 218
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 219 EEPTQTYNR-LKTLINKI 235
>gi|396582326|gb|AFN88190.1| gag-pol polyprotein [Phaseolus vulgaris]
gi|396582341|gb|AFN88205.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 78
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFE 122
+LF + + IL I ++++IWD +K K+EGN +++ ++ + REFE
Sbjct: 22 FLFAGVSQMILTRIMAIKSSEKIWDYLKGKYEGNKKIQGMKVLNIIREFE 71
>gi|338808444|gb|AEJ07945.1| Opie1 putative gag protein [Zea diploperennis]
Length = 713
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE+G ++ S + +E K+ +
Sbjct: 102 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVESGMHFDSTDSPMF------INEQIHKNAQ 155
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + D AK+IWD +K EGN ++++ + E M G
Sbjct: 156 ATTVLLASLCRDEYHKVSGLDNAKQIWDTLKISHEGNDVTLLTKMELVEGELGRFAMIRG 215
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 216 EEPTQTYNR-LKTLINKI 232
>gi|77555858|gb|ABA98654.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 475
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K N L I R+ D + TA EIW+A+K +G + +KK + + L +++ E
Sbjct: 37 QNCKAHNILLSGICRSDFDRVSHFQTAHEIWNALKNFHQGTSNIKKLR-RDLFKKYIKFE 95
Query: 126 MKSGEEDVKIVEKILRTLTEKFNDIVC---SIEESKDID 161
MK GE L +FN I+ S++ S D++
Sbjct: 96 MKPGEA--------LDDYLSRFNKILSDLRSVDSSYDVN 126
>gi|40786601|gb|AAR89876.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709765|gb|ABF97560.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 554
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 60 TDELKLK---DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
TD LK + + K +N L I R+ D + TA EIW A+ G +K+ +
Sbjct: 103 TDALKTEVENNCKARNILLSGISRSDYDRVAHLQTAHEIWVALSNFHRGTNNIKELRRDL 162
Query: 117 LRREFETLEMKSGE 130
++E+ EMK GE
Sbjct: 163 FKKEYIKFEMKPGE 176
>gi|12321355|gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W+ +RS++ +G ++ +P GS + D L + L V +++
Sbjct: 42 NYEEWACGFKTALRSRKKFGFLDGTIPQPLDGS------PDLEDWLTINALLV-SWMKMT 94
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
ID +L I +D A+++W+ ++K+F + K +++A
Sbjct: 95 IDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKA 133
>gi|338808404|gb|AEJ07908.1| Opie1 putative gag protein [Zea luxurians]
Length = 796
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 13 PRFVGHYDH--WSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDL 68
P F G DH WS M + + S W +VE+G +S S + +E K+
Sbjct: 104 PHFDGE-DHGFWSHKMRSHLFSLHPSIWEIVESGMHFDSSDSPMF------INEQIHKNA 156
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
+ L ++ R + D AK+IWD +K EGN ++++ + E M
Sbjct: 157 QATTVLLASLCRDEYHKVSGLDNAKQIWDTLKISHEGNDVTLLTKMELVEGELGRFAMIR 216
Query: 129 GEEDVKIVEKILRTLTEKF 147
GEE + + L+TL K
Sbjct: 217 GEEPTQTYNR-LKTLINKI 234
>gi|357450779|ref|XP_003595666.1| hypothetical protein MTR_2g058860 [Medicago truncatula]
gi|355484714|gb|AES65917.1| hypothetical protein MTR_2g058860 [Medicago truncatula]
Length = 278
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK-- 127
++ L A+ R + K TAK ++ ++ +EGN +V++++ L ++E +MK
Sbjct: 1 MRGILVAALPRAEYLKMSNKSTAKAMFASLYANYEGNKKVREAKAIMLVHQYELFKMKYY 60
Query: 128 --------------SGEEDVK-------IVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
S + +K V K++R+L ++ V I+E+KD+++LS
Sbjct: 61 ESIEAMYSRFQTLFSRPQILKKNYVASDYVSKLMRSLPARWRPKVTVIDEAKDLNTLS-- 118
Query: 167 AEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKA 209
V+ L+ + + E G EH +T + S WK+
Sbjct: 119 -------VEDLISSLKVHEIG-LNEHESTKKPKFIALTSKWKS 153
>gi|147768394|emb|CAN66969.1| hypothetical protein VITISV_044241 [Vitis vinifera]
Length = 278
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 28/137 (20%)
Query: 54 DAHQKMTDELKLKDLKVKNYLFQA-IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKS 112
D H + +L +K + Y Q ++R + I + +AKEIW ++ E +VKKS
Sbjct: 10 DEHDRRNFQLNVKTI----YTLQCFMNRNEYNRIFQCKSAKEIWRLLEINHERTNQVKKS 65
Query: 113 QLQALRREFETLEMKSGEEDVKI-----------------------VEKILRTLTEKFND 149
++ L +E MK E V++ V KILR+L K +
Sbjct: 66 KINLLVHSYELFXMKDNETIVEMITRFTDIVNGLEVLGKIYKEFEKVMKILRSLPSKXHT 125
Query: 150 IVCSIEESKDIDSLSEE 166
V +I+E+KD+ L E
Sbjct: 126 NVIAIQEAKDLSRLXLE 142
>gi|147767925|emb|CAN73401.1| hypothetical protein VITISV_006543 [Vitis vinifera]
Length = 714
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K+V KILR+L EKF V +IEESKD+DSL
Sbjct: 42 KVVRKILRSLLEKFRAKVTAIEESKDVDSL 71
>gi|158828152|gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 1296
Score = 40.4 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 30/140 (21%)
Query: 53 MDAHQKMTDEL----KLKDLKVKNYLFQAIDRTILDTIRKKD-TAKEIWDAMKKKFEGNA 107
+D K T E+ K +D VK +++ I +I+DT+ KK+ TA+E+W A++ F N
Sbjct: 52 LDGSTKSTPEIAKEWKERDGHVKMWIYGTISESIIDTVLKKNSTARELWLAIETLFLDNK 111
Query: 108 RVKKSQLQALRREFETL------------EMKSGEE----------DVKIVEKILRTLTE 145
+ QL+ E T+ +MK+ + D +V +L L++
Sbjct: 112 EARALQLE---NELRTMVIGDLSVHDYCKKMKNLADLLANIDFPVTDRALVMHMLNGLSD 168
Query: 146 KFNDIVCSIEESKDIDSLSE 165
KF+ I+ I+ S E
Sbjct: 169 KFDSIINVIKHKSPFLSFLE 188
>gi|147765749|emb|CAN75624.1| hypothetical protein VITISV_007027 [Vitis vinifera]
Length = 166
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 130 EEDVKIVEKILRTLTEKFNDIVCSIEESKDIDS 162
+ D K+V KILR+L ++F V +IEESKDIDS
Sbjct: 103 QRDSKVVRKILRSLPKRFRPKVTTIEESKDIDS 135
>gi|38344211|emb|CAE01974.2| OSJNBb0051N19.3 [Oryza sativa Japonica Group]
Length = 1414
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 57 QKMTDELKLKDL-KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
++ T ++ DL + N L I R+ D + TA EIW+A+ G +K+ +
Sbjct: 54 RQATSAVRPVDLHRAHNILLSGISRSDYDRVAHFQTAHEIWNALSNFHRGTNNIKELRRD 113
Query: 116 ALRREFETLEMKSGE 130
++E+ EMK GE
Sbjct: 114 IFKKEYIKFEMKPGE 128
>gi|396582329|gb|AFN88193.1| putative receptor-like protein kinase [Phaseolus vulgaris]
Length = 1203
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 32/118 (27%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE------------- 137
+AKE+WD ++ EG VK+++ L +E+E M+ GE ++ +
Sbjct: 72 SAKEMWDTLEVTHEGTNEVKRARKHTLIQEYEMFRMQKGETIAEVQKRFTHIINHLMSLD 131
Query: 138 ----------KILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEEE 185
KIL+ L + V +I ESKD+ SLS V +L G E E
Sbjct: 132 KTFDKDELNIKILKCLDSTWKPKVTAISESKDLTSLS---------VASLFGKLREHE 180
>gi|21740988|emb|CAD41679.1| OSJNBa0019K04.26 [Oryza sativa Japonica Group]
Length = 559
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G HY W M + S W +V TG D P L +++ ++ +
Sbjct: 52 PHFDGTHYAAWKHKMKLHLISLHPSIWKVVCTGIDVPNDDMELTSEQEQLIH----RNAQ 107
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + A+ + + AKEIWD ++ EG+ V++ +++ L M
Sbjct: 108 ASNTILSALSPKEFNKFDGLEEAKEIWDTLQLAHEGSPAVREDKIELLEGRLGRFVMDDK 167
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+++LR + +V I E KD L+
Sbjct: 168 ETPQEMYDRMMILVNKIKGFGSEDMTNHFVVKRLLRAFGPRNPTLVSMIRERKDFKRLT 226
>gi|147837028|emb|CAN70327.1| hypothetical protein VITISV_041473 [Vitis vinifera]
Length = 433
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 26 MDNFMRSKEY--WGLVETGYDEPAS--GSVLMDAHQKMTDELKLKD--LKVKNY--LFQA 77
M +++S + W ++E G P VL+ ++ +EL ++ L VK L A
Sbjct: 1 MTRYLQSTDLDVWDVIEDGLTFPTKLVDGVLVPKPKQEWNELNRRNFQLNVKAVFTLQGA 60
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVE 137
+DR + I + +A+EIW ++ EG +VK+S++ L +E MK E IVE
Sbjct: 61 MDRNEYNRICQCKSAEEIWRLLEITHEGTNQVKESKINLLVHNYELFSMKEXE---TIVE 117
Query: 138 KILRTLTEKFNDIVCSIE 155
I R F DIV +E
Sbjct: 118 MITR-----FXDIVNGLE 130
>gi|357483983|ref|XP_003612278.1| hypothetical protein MTR_5g023220 [Medicago truncatula]
gi|355513613|gb|AES95236.1| hypothetical protein MTR_5g023220 [Medicago truncatula]
Length = 67
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 81 TILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
+I ++I ++ KE WD ++K + + ++KK +L ALRR++E L
Sbjct: 2 SIFESIMHCESVKEAWDILEKVYAADEKLKKVKLHALRRQYELLH 46
>gi|147810276|emb|CAN64705.1| hypothetical protein VITISV_029007 [Vitis vinifera]
Length = 604
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
A+DR + I + +AKEIW ++ EG +VK+S++ L +E MK E IV
Sbjct: 311 AMDRNEYNRIFQCKSAKEIWRLLEITHEGTNQVKESKINLLVHNYELFSMKEIET---IV 367
Query: 137 EKILRTLTEKFNDIVCSIE 155
E I R F DIV +E
Sbjct: 368 EMITR-----FTDIVNGLE 381
>gi|357486529|ref|XP_003613552.1| hypothetical protein MTR_5g037990 [Medicago truncatula]
gi|355514887|gb|AES96510.1| hypothetical protein MTR_5g037990 [Medicago truncatula]
Length = 208
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 132 DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEE 182
D +IVEKI+RTL+ +F+ IV I+ESKD+ +L K E+K+ L A E
Sbjct: 69 DPQIVEKIMRTLSLRFDFIVVDIQESKDVKTL------KIQELKSSLEAHE 113
>gi|77553755|gb|ABA96551.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1487
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 25/151 (16%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKL---KDLKVKNY 73
+ HW M ++ +++Y W V Y + Q T LK ++ K +N
Sbjct: 17 FSHWCSRMQYYIMAEDYDIWRKVSHPY---------VIHEQINTAALKTEFEQNCKARNI 67
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
L I + D + T+ EIW A+ +G +K+ + ++E+ EMK GE
Sbjct: 68 LLSGISCSDYDRVAHIQTSHEIWIALSNFHQGTNNIKELRRDLFKKEYIKFEMKPGEA-- 125
Query: 134 KIVEKILRTLTEKFNDIVC---SIEESKDID 161
L +FN I+ S++ S D++
Sbjct: 126 ------LDDYLSRFNKILSDLRSVDSSYDVN 150
>gi|357505795|ref|XP_003623186.1| hypothetical protein MTR_7g065450 [Medicago truncatula]
gi|355498201|gb|AES79404.1| hypothetical protein MTR_7g065450 [Medicago truncatula]
Length = 193
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 29/145 (20%)
Query: 17 GHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
G+++ WS+++ ++W +D L++ Q +EL K + + +
Sbjct: 17 GNWERWSVVLKT-----QFWA-----HD-------LIEIMQNGNEELGTNATKPQRNVHK 59
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-EDVKI 135
+++ I K A ++ D ++ EG+ +VK+ +++ + SG D +I
Sbjct: 60 DLNKKDCQKISKITNATKLLDILENYNEGDEKVKQ-----IKKAW------SGTIYDQQI 108
Query: 136 VEKILRTLTEKFNDIVCSIEESKDI 160
VEKI+RTL+ +FN IV +I+ES D+
Sbjct: 109 VEKIMRTLSPRFNFIVVAIQESMDV 133
>gi|147859773|emb|CAN79271.1| hypothetical protein VITISV_021155 [Vitis vinifera]
Length = 563
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 25/126 (19%)
Query: 6 NFSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELK 64
N + IP F G HY W + M ++RS+ W +V + D P G+ + + K +E K
Sbjct: 5 NSTSFVIPVFNGKHYHIWIVKMRFYLRSQGLWNVVMSKADPPPLGANHIVSQMKAYEEEK 64
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
LK K L + I I +T K+ REFE +
Sbjct: 65 LKKDKTITCLHSGLANHIFTKIMDLETPKQ------------------------REFELM 100
Query: 125 EMKSGE 130
+MK E
Sbjct: 101 KMKDNE 106
>gi|62732769|gb|AAX94888.1| hypothetical protein LOC_Os11g19600 [Oryza sativa Japonica Group]
gi|77550138|gb|ABA92935.1| hypothetical protein LOC_Os11g19600 [Oryza sativa Japonica Group]
Length = 263
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 83/215 (38%), Gaps = 33/215 (15%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G +Y W +M + S W +V TG D P L +++ ++ +
Sbjct: 53 PQFDGTYYAAWKHMMKVHLISLHPSIWNVVCTGIDIPHDDMELTSEQEQLIH----RNAQ 108
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
N + A+ + + + AKEIWD ++ EG+ V++++++ L M
Sbjct: 109 ASNAILSALSPEEFNKVDGLEEAKEIWDTLQLTHEGSPAVREAKIELLEGRLGRFVMDDK 168
Query: 130 EEDVKIVEKIL---------------------RTLTEKFNDIVCSIEESKDIDSLSEEAE 168
E ++ ++++ R + +V I E KD L+
Sbjct: 169 ETPQEMYDRMMILVNKIKGLGSEDMTNHFVVKRLFGPRNPTLVSMIRERKDFKRLT---- 224
Query: 169 VKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNC 203
D + ++ E +EE G+ +R S C
Sbjct: 225 -PSDILGRIVSHEMQEEEGRCHAQKFPNRIPSRMC 258
>gi|284434730|gb|ADB85427.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1487
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
K +N+L Q + R+ + + +A EIW + EG+ +K+ + L++E+ +E +
Sbjct: 37 KARNFLIQGLSRSEFECVTHLRSAHEIWKTICDYHEGSTAIKEVRQNQLKKEYSKIEQRP 96
Query: 129 GE 130
GE
Sbjct: 97 GE 98
>gi|50838923|gb|AAT81684.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 429
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 49/181 (27%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y W M ++S W +VE GY +L Q D K D
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINPSIWRIVEKGY-------IL----QNPEDPTKEDD-- 83
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
+N F +D ++AK IWD ++ +EG V +S+++ L+ +FE M G
Sbjct: 84 -ENDEFNHVDGI--------ESAKVIWDTLRNMYEGTDSVHESKVEILKGQFERFVMLDG 134
Query: 130 EE------------------------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSE 165
E D +V+K++R +T + + +V I E D +L+
Sbjct: 135 ESPSNMYDRLSKIINEIKGLGSKDNTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTLTP 194
Query: 166 E 166
Sbjct: 195 H 195
>gi|108709823|gb|ABF97618.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 434
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 24/101 (23%)
Query: 90 DTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE------------------ 131
++AK IWD ++ +EG V +S+++ L+ +FE M GE
Sbjct: 100 ESAKVIWDTLRNMYEGTDSVHESKVEILKGQFERFVMLDGESPSNMYDRLSKIINEIKGL 159
Query: 132 ------DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
D +V+K++R +T + + +V I E D +L+
Sbjct: 160 GSKDNTDEVVVKKMVRAITPRNSTLVTIIRERPDYKTLTPH 200
>gi|396582331|gb|AFN88195.1| phytoalexin-deficient 4-2 protein [Phaseolus vulgaris]
Length = 1004
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 23/102 (22%)
Query: 86 IRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE--------------- 130
I + + AKE+WD ++ EG VK+++ AL +E+E M+ GE
Sbjct: 573 ISQCEIAKEMWDILEVTHEGTNDVKRARKHALIQEYEMFRMQKGETISEVHKRFSHIVNH 632
Query: 131 --------EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
E+ ++ KIL+ L + V ++ ESKD+ S+S
Sbjct: 633 LMGFGKTFEEEELNIKILKCLDRTWQPKVTAMSESKDLTSMS 674
>gi|147835879|emb|CAN68421.1| hypothetical protein VITISV_031322 [Vitis vinifera]
Length = 548
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 4 EGN--FSQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMT 60
EGN FS A P F G +Y W++ M+ ++ + + W V+ YD P L D +
Sbjct: 2 EGNSSFSAMAPPVFNGDNYTIWAVRMEAYLDAVDLWEAVDDDYDVPP----LSDNPTYLK 57
Query: 61 DELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
E + D Q +L+ IR + K K++ ++++ L E
Sbjct: 58 FEYEGDD--------QIKGMKVLNLIRDFELQKMKESETIKEYSERLLSIANRVRLLGSE 109
Query: 121 FETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
F +D +IVEKI+ T+ E+F + ++E ++D+ ++
Sbjct: 110 F---------KDSRIVEKIMVTIPERFEATITTLENTRDLSKIT 144
>gi|2961349|emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana]
Length = 1109
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAI 78
Y+ W+ +RS++ +G ++ +P GS + D L + L V +++ I
Sbjct: 43 YEEWACGFKTALRSRKKFGFLDGTIPQPLDGS------PDLEDWLTINALLV-SWMKMTI 95
Query: 79 DRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
D +L I +D A+++W+ ++K+F + K +++A
Sbjct: 96 DSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKA 133
>gi|147807409|emb|CAN70762.1| hypothetical protein VITISV_009965 [Vitis vinifera]
Length = 160
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
KV L ++DR + I + AKEIW ++ EG +VK+ ++ L +E MK
Sbjct: 22 KVVYTLQYSMDRNEYNRICQCKLAKEIWRLLEITHEGTNQVKELKINLLVCSYELFLMKD 81
Query: 129 GEEDVKI-----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSE 165
E V++ V KILR+L K++ V +I+E+KD+ L
Sbjct: 82 NETIVEMITRIIDIVNGLEALGKTYKESEKVMKILRSLPSKWHTKVTTIQEAKDLTKLPL 141
Query: 166 E 166
E
Sbjct: 142 E 142
>gi|307191321|gb|EFN74944.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Camponotus floridanus]
Length = 305
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEP--ASGSVLMDAHQKMTDELKLKDLKVKNYLF 75
+YD W++ M+ + + WG V +P G + + D ++D K K +
Sbjct: 14 NYDTWAIQMEAILTKNDAWGYVCGNKVKPEVIEGDAVSAEAARTWD---IQDKKAKADII 70
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL----------------QALRR 119
+I + L I+ T++E+W +K ++ + +K+ L LRR
Sbjct: 71 LSIKSSELKQIKGCCTSREVWLKLKSIYQSSGPARKATLLKQLTLHKMNDGGDVRDHLRR 130
Query: 120 EFETLEMKSGEEDVKI-----VEKILRTLTEKFNDIVCSIEESKDIDS 162
F+T++ K E DV I +L +L F++ C+IE ++ S
Sbjct: 131 FFDTID-KLSEMDVDINADLLTIMLLYSLPLTFDNFRCAIESRDELPS 177
>gi|147832736|emb|CAN63748.1| hypothetical protein VITISV_009060 [Vitis vinifera]
Length = 1066
Score = 39.7 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
Query: 14 RFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKN 72
RF G +Y W F++ KE WG ++ P L + ++KD +V
Sbjct: 12 RFTGKNYCXWEFQFKLFVKGKELWGHIDGSNPAPRDAEAL--------SKWEIKDAQVMT 63
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEED 132
++ +++ ++ +R TA +W+ + + + + QL E+E G
Sbjct: 64 WILSSVEPHLILKLRPYKTAAAMWNYLHMVYNQDNFARCFQL-----EYEMANFTQGSLS 118
Query: 133 VKIVEKILRTLTEKFNDI 150
++ +TL ++DI
Sbjct: 119 IEEYFSCFQTLWTDYSDI 136
>gi|147839206|emb|CAN76923.1| hypothetical protein VITISV_015625 [Vitis vinifera]
Length = 430
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI- 135
A+DR + I + +AKEIW + +G +VK+S++ L +E MK E V++
Sbjct: 60 AMDRNEYNRICQCKSAKEIWRLLGITHKGTNQVKESKINLLVHNYELFSMKEIETIVEMI 119
Query: 136 ----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR+L K++ V +I+++KD+ L E
Sbjct: 120 TRFTDIVNGLEALGKTYKKSEKVMKILRSLPSKWHTKVTAIQKAKDLTKLPME 172
>gi|48209880|gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W+ M N R+K+ G ++ +P +D + L + ++F
Sbjct: 29 NYEEWAKAMRNAFRAKKKLGFIDGLITQPKEEGFELDDWYAVNSMLIV-------WVFNT 81
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKF 103
ID ++ TI +T KE+W+ ++++F
Sbjct: 82 IDPSLRSTISYMETVKELWEDLRERF 107
>gi|77554614|gb|ABA97410.1| NB-ARC domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 757
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA EIW A+ +G +K+ + ++E+ +
Sbjct: 315 QNCKARNILLSGISRSDYDRVAHLQTAHEIWIALSNFHQGTNNIKELRRDLFKKEYIKFQ 374
Query: 126 MKSGE 130
MK GE
Sbjct: 375 MKPGE 379
>gi|359482662|ref|XP_002281245.2| PREDICTED: disease resistance protein RFL1-like [Vitis vinifera]
Length = 1112
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K+V KILR+L E+F V +IEESKD+DSL
Sbjct: 32 KVVRKILRSLPERFRAKVTAIEESKDVDSL 61
>gi|2642431|gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y WS + NF+R+K+ G ++ +PA A +++ + + + V ++ +
Sbjct: 43 NYAEWSEELQNFLRAKQKLGFIDGSIPKPA-------ADPELSLWIAINSMIV-GWIRTS 94
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
ID TI T+ A ++W+ ++++F V+K+ L+
Sbjct: 95 IDPTIRSTVGFVSEASQLWENLRRRFSVGNGVRKTLLK 132
>gi|14028995|gb|AAK52536.1|AC078891_5 Putative polyprotein [Oryza sativa Japonica Group]
gi|31429879|gb|AAP51868.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 467
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 46 PASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEG 105
PA+ + D H+ + +N L I R+ D TA EIW+A+K +
Sbjct: 131 PAATGLRRDFHR----------FEARNILLSGISRSDFDRASHFQTAHEIWNALKNFHQE 180
Query: 106 NARVKKSQLQALRREFETLEMKSGE 130
+ +K+ + ++E+ EMK GE
Sbjct: 181 TSNIKELRRDLFKKEYIKFEMKPGE 205
>gi|17082480|gb|AAL35397.1| Opie2b gag protein [Zea mays]
Length = 796
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 13 PRFVGH-YDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G Y WS M + + S W +VE+G +S + + +E K+ +
Sbjct: 105 PHFDGEDYGFWSHKMRSHLFSLHPSIWEIVESGMHFDSSDNPMF------INEQIHKNAQ 158
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
L ++ R + D AK+IWD + EGN ++++ + E M G
Sbjct: 159 ATTVLLASLCRDEYHKVSGLDNAKQIWDTLNISHEGNDVTLLTKMELVEGELGRFAMIRG 218
Query: 130 EEDVKIVEKILRTLTEKF 147
EE + + L+TL K
Sbjct: 219 EEPTQTYNR-LKTLINKI 235
>gi|147790748|emb|CAN74955.1| hypothetical protein VITISV_043980 [Vitis vinifera]
Length = 224
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI-- 135
+DR + I + +AKEIW ++ EG +VK+S++ L +E M E V++
Sbjct: 1 MDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKINLLVHNYELFSMNETETIVEMIT 60
Query: 136 ---------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
V KILR+L K++ V +I+E+KD+ L E
Sbjct: 61 RFTDIINGLEALGKTYKESEKVMKILRSLPSKWHTKVTAIQEAKDLTKLPME 112
>gi|147844093|emb|CAN80042.1| hypothetical protein VITISV_041848 [Vitis vinifera]
Length = 512
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 132 DVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
+ K+V K+LR+L E+F V +IEESKD+DSL
Sbjct: 134 NTKVVRKMLRSLPERFKAKVTTIEESKDVDSL 165
>gi|110288717|gb|AAP52457.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1305
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G HY W M + S W +V G D P L +++ ++ +
Sbjct: 7 PQFDGTHYAAWKHKMKLHLISLHPSIWKVVCIGVDVPHDDMELTSEQEQLIH----RNAQ 62
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + + + + + AKEIWDA++ EG+ V++++++ L M
Sbjct: 63 ASNAILFVLSLEEFNKVDGLEEAKEIWDALQLAHEGSPTVREAKIELLEGRLGRFVMDDK 122
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+++LR + +V I E KD L+
Sbjct: 123 ETPQEIYDRMMILVNKIKGLGSEDMTNHFVVKRLLRAFGPRNPTLVSMIRERKDFKRLT 181
>gi|14589376|gb|AAK70631.1|AC091238_9 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
gi|21321748|gb|AAM47283.1|AC122146_2 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
Length = 1289
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G HY W M + S W +V G D P L +++ ++ +
Sbjct: 7 PQFDGTHYAAWKHKMKLHLISLHPSIWKVVCIGVDVPHDDMELTSEQEQLIH----RNAQ 62
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + + + + + AKEIWDA++ EG+ V++++++ L M
Sbjct: 63 ASNAILFVLSLEEFNKVDGLEEAKEIWDALQLAHEGSPTVREAKIELLEGRLGRFVMDDK 122
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+++LR + +V I E KD L+
Sbjct: 123 ETPQEIYDRMMILVNKIKGLGSEDMTNHFVVKRLLRAFGPRNPTLVSMIRERKDFKRLT 181
>gi|302756671|ref|XP_002961759.1| hypothetical protein SELMODRAFT_403909 [Selaginella moellendorffii]
gi|300170418|gb|EFJ37019.1| hypothetical protein SELMODRAFT_403909 [Selaginella moellendorffii]
Length = 612
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 36 WGLVETGYDEPASGSVL-----MDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKD 90
W +V ++P+ +D+H+K K+ + K+ + + +D+ TI + D
Sbjct: 40 WDIVNADLNKPSPPPAEAAEGEIDSHKKELKVFKVHKARAKSLIMRWLDKGDKATIARTD 99
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDI 150
+ E WD +KK + + V K LQ + E + E + E L L E+F D+
Sbjct: 100 SVAEAWDQLKKLYLEKSFVSKVGLQGKLNQAERMGHPIPTE--TLAEVALLGLGEEF-DV 156
Query: 151 VCSIEESKDIDSLSE-EAEVKEDE 173
V S + ++D+ + E E ++E E
Sbjct: 157 VQSWKFTRDLPTFPEAEKAIREQE 180
>gi|3930515|gb|AAC80426.1| putative gag protein [Nicotiana tabacum]
Length = 457
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G +Y +W M F+R+ + W +++ G + Q M E K +
Sbjct: 17 PVFDGSNYAYWKERMRVFIRANNFRLWQIIKYG------EQMTEQVGQAMVSEHNTKAI- 69
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
N L++++++ I I +AKE+WD ++ +E + S M G
Sbjct: 70 --NMLYRSLNQEICRKISHCKSAKEVWDKLEDFYENTPQEADSSCDEPNVR---CYMADG 124
Query: 130 EEDVKIVEKI-LRTLTEKFNDIVCSIEESKDIDSLSEEAEVK 170
EE+V + L E FND+ E K + +++EA K
Sbjct: 125 EEEVSTYDSYSFEELQEAFNDL---FYELKKVSKIAKEATAK 163
>gi|147854508|emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera]
Length = 314
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 3 SEGNFSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDE 62
SEG F+ P I +YD WS L++ + +E + + P D ++K E
Sbjct: 11 SEGTFN-PGIILTESNYDVWSQLVEMHITEREKLSYIRGKTNLPKESE---DGYEKWYAE 66
Query: 63 LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKF 103
+ KVK +L ++ I+ + TA+EIW A+ K F
Sbjct: 67 ----NQKVKRWLLMSMSPEIMKRYLRLPTAQEIWSALSKAF 103
>gi|9759493|dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAI 78
Y+ W+ +RS++ +G ++ +P GS + D L + L V +++ I
Sbjct: 43 YEEWACGFKTALRSRKKFGFLDGTIPQPLDGS------PDLEDWLTINALLV-SWMKMTI 95
Query: 79 DRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQA 116
D +L I +D A+++W+ ++K+F + K +++A
Sbjct: 96 DSELLTNISHRDVARDLWEQIRKRFFVSNGPKNQKMKA 133
>gi|147860899|emb|CAN82949.1| hypothetical protein VITISV_018262 [Vitis vinifera]
Length = 724
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 38/147 (25%)
Query: 30 MRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK-------------DLKVKNYLFQ 76
M+S++ W V+ G+ P +++ + T+ +K K + +F
Sbjct: 1 MQSEKVWNAVKFGWSPPK----VLNRESRPTNVIKPKLEWDRSENEACENTARAMYSIFN 56
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
AI I +AK+ WD ++ EG K S+LQ L
Sbjct: 57 AISTDEFRRIATCTSAKKAWDILQVTHEGTNAGKVSKLQMLTS----------------- 99
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSL 163
R+L ++F V +IEESKD+DSL
Sbjct: 100 ----RSLPKRFRAKVTAIEESKDVDSL 122
>gi|147788620|emb|CAN67587.1| hypothetical protein VITISV_036279 [Vitis vinifera]
Length = 1034
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 8 SQPAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKM--TDEL 63
S P +F +Y W+ + F++ K+ WG ++ T ++P+ + D Q + +
Sbjct: 28 SAPVCVKFTDTNYSTWAFQFELFLKGKDLWGHIDGTDVEKPS----IFDKFQDVGSSPSW 83
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
+ D ++ ++LF +I I+ +R +A+ +W +KK + + + QL+
Sbjct: 84 VVLDARIMSWLFGSIVPLIVTHLRPHRSAQSMWAYLKKVYHQDNDTRCFQLE 135
>gi|77554006|gb|ABA96802.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 526
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA EIW A+ +G +K+ + ++E+ E
Sbjct: 75 QNCKARNILLSGISRSDYDRVAHLQTAHEIWIALSNFHQGTNNIKELRRDLFKKEYIKFE 134
Query: 126 MKSG 129
MK G
Sbjct: 135 MKPG 138
>gi|12583809|gb|AAG59661.1|AC084319_19 putative copia-type pol polyprotein [Oryza sativa Japonica Group]
Length = 1778
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G +Y W M + S W +V TG D P L +++ ++ +
Sbjct: 53 PQFDGTYYAAWKHKMKLHLISLHPNIWKVVCTGIDIPHDDMELTSEQEQLIH----RNAQ 108
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + A+ + I AKEIWD ++ EG+ V++++++ L M
Sbjct: 109 ASNAILFALSPEEFNKIDGLVEAKEIWDTLQLAHEGSPAVREAKIELLEERLGRFVMDDK 168
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+K+LR + +V I E KD L+
Sbjct: 169 ETPQEIYDRMMILVNKIKGLGSEDMTNHFVVKKLLRAFGPRNPTLVSMIRERKDFKRLT 227
>gi|15221942|ref|NP_175304.1| uncharacterized protein [Arabidopsis thaliana]
gi|51968950|dbj|BAD43167.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
gi|88900318|gb|ABD57471.1| At1g48720 [Arabidopsis thaliana]
gi|91805343|gb|ABE65401.1| hypothetical protein At1g48720 [Arabidopsis thaliana]
gi|110739223|dbj|BAF01526.1| hypothetical protein [Arabidopsis thaliana]
gi|332194218|gb|AEE32339.1| uncharacterized protein [Arabidopsis thaliana]
Length = 97
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKE 94
D K ++Q +D + + + +AK+
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKD 93
>gi|77556353|gb|ABA99149.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 381
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 28 NFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIR 87
NF R +E + L Y G VL D + + + D V+++L+ + +LD IR
Sbjct: 115 NFARWREQFLLKLGKYS--LQGHVLHDDCPLNSPDWERMDCVVRSWLYGTLSDNLLDIIR 172
Query: 88 KKD----TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTL 143
+ TA+ IW A++ +F GN + L A R F G+ V K+L+T
Sbjct: 173 HRGDQGVTARTIWLAIESQFLGNREARALILDAKLRTF-----VQGDLSVTDYCKLLKTT 227
Query: 144 TEKFNDI 150
D+
Sbjct: 228 AYNLADL 234
>gi|116830369|gb|ABK28142.1| unknown [Arabidopsis thaliana]
Length = 98
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 7 FSQPAIPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
F P + + +YD+WS+ M + + + W +VE G+ EP + L + + + +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKE 94
D K ++Q +D + + + +AK+
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKD 93
>gi|108709391|gb|ABF97186.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1759
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G +Y W M + S W +V TG D P L +++ ++ +
Sbjct: 53 PQFDGTYYAAWKHKMKLHLISLHPNIWKVVCTGIDIPHDDMELTSEQEQLIH----RNAQ 108
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + A+ + I AKEIWD ++ EG+ V++++++ L M
Sbjct: 109 ASNAILFALSPEEFNKIDGLVEAKEIWDTLQLAHEGSPAVREAKIELLEERLGRFVMDDK 168
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V+K+LR + +V I E KD L+
Sbjct: 169 ETPQEIYDRMMILVNKIKGLGSEDMTNHFVVKKLLRAFGPRNPTLVSMIRERKDFKRLT 227
>gi|77551568|gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1064
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKD-TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
D V+ +LF ++ ILD + + D TA+++W A+ F+ N K+ + L EF +
Sbjct: 85 DCCVRGWLFGSVSDAILDVVMEPDQTARDLWLAIDDLFQAN---KEPRAIYLSHEFHS-- 139
Query: 126 MKSGEEDVKIVEKILRTLTEKFNDIVCSIEESK 158
M G+ + I + ++T + D+ + ES+
Sbjct: 140 MTQGDMPIAIYCQKVKTAADALRDVGHPVTESQ 172
>gi|27764675|gb|AAO23100.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31415950|gb|AAP50970.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108710196|gb|ABF97991.1| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
Length = 286
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 73 YLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE 130
Y I R+ D + TA EIW+A K +G ++K+ + ++E+ EMK GE
Sbjct: 27 YRQHRISRSDFDRVSHLQTANEIWNAFKNFHQGTTKIKELRQGLFKKEYVKFEMKPGE 84
>gi|78708042|gb|ABB47017.1| hypothetical protein LOC_Os10g12780 [Oryza sativa Japonica Group]
Length = 267
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
D + + L A+ + ++ + TAKE WDA+ G+ RV+KS QALR+E
Sbjct: 214 DRRALDALIAAVPPEMKFSLSQNPTAKEAWDAIAAACIGSDRVRKSTPQALRKE 267
>gi|147828315|emb|CAN75398.1| hypothetical protein VITISV_004494 [Vitis vinifera]
Length = 236
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 8 SQPAIPRFV-GHYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKM--TDEL 63
S P +F +Y W+ + F++ K+ WG ++ T ++P++ D Q + +
Sbjct: 3 SAPLCVKFTDTNYSTWAFQFELFLKGKDLWGHIDGTDVEKPST----FDKSQDVGSSPSW 58
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
+ D ++ ++L +++ I+ ++ +A+ +W +KK + + ++ QL E
Sbjct: 59 AVLDARIMSWLLGSVEPHIVTHLQPHRSAQSMWAYLKKVYHQDNDARRFQL-----EHAI 113
Query: 124 LEMKSGEEDVKIVEKILRTLTEKFNDIV 151
+ + G ++ TL ++ D+V
Sbjct: 114 VMFQHGSLSIQDYYSAFLTLWHEYADLV 141
>gi|77551143|gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1508
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLK---DLKVKNY 73
+ HW M +++ ++ Y W V Y P + + +D LK K + K +N
Sbjct: 19 FPHWCSKMQSYIMAENYDIWKKVYHPYVIPEAIN---------SDALKTKFENNCKARNI 69
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRRE 120
L I R+ + +TA EIW+A+K +G +K+ + ++E
Sbjct: 70 LLSGISRSDYARVAHLETAHEIWNALKSFHQGTNNIKELRRDLFKKE 116
>gi|77554497|gb|ABA97293.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 275
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 23/103 (22%)
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
N LF ++ + D + +TA EIW+ + + EG + K ++L L+ ++ET M E
Sbjct: 43 NALFNSLSQEEFDRMSNLETAYEIWNKLVEIHEGTSEYKDAKLHFLKIQYETFSMLPHES 102
Query: 132 -----------------------DVKIVEKILRTLTEKFNDIV 151
D+++ +KILR L +K +V
Sbjct: 103 VNDMYGRLNIIINDLKGLGATYTDLEVAQKILRALPDKHETLV 145
>gi|359487104|ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]
Length = 1624
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL----KLKDLKVKNY 73
+Y WS +++ ++ K+ G + +P + TD + ++ VK +
Sbjct: 142 NYALWSQVVEMYVAGKDKLGYINDDLSQPLT-----------TDPFFRRWRTENATVKGW 190
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKK-FEGNARVKKSQLQALRREFETLEMKSG 129
L ++D +++ + TAK++WDA+ F+G+ +Q+ LRR L SG
Sbjct: 191 LIGSMDPSLIGNFIRFPTAKQVWDAIATTYFDGS---DATQVYELRRRVARLRQGSG 244
>gi|357458485|ref|XP_003599523.1| hypothetical protein MTR_3g034520 [Medicago truncatula]
gi|355488571|gb|AES69774.1| hypothetical protein MTR_3g034520 [Medicago truncatula]
Length = 503
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 12 IPRFVGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVL-MDAHQKMTDELKLKDLKV 70
+P+F G + +S NF + + + DE G+V+ H + K +
Sbjct: 29 VPKFNGDPEEFSWWKTNFYKD----DIGDLVLDE--EGAVIDRRKHTPAQKKFYKKHHTI 82
Query: 71 KNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK--- 127
+ L +AI + + K TAK ++ ++ +EG+ +V++++ L ++E +MK
Sbjct: 83 RGELVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKPLMLVHQYELFKMKDDE 142
Query: 128 -------------SGEEDVKI-------VEKILRTLTEKFNDIVCSIEESKDIDS 162
SG + +K V KILR+L ++ V +IEE+KD+++
Sbjct: 143 SIEKMYSRFQTLVSGHQILKKSYVASDHVRKILRSLPLRWRPKVTAIEEAKDLNT 197
>gi|147774140|emb|CAN76790.1| hypothetical protein VITISV_038838 [Vitis vinifera]
Length = 386
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 32/160 (20%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W + M +++ + W VE Y+ P G+ A K+ E K + K K LF
Sbjct: 17 NYETWDVRMTVHLQALDVWEAVEENYEVPLLGANPTVAQMKLHKERKTRKAKTKACLFV- 75
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE------- 130
+ +K++++ + R+K Q+ L REFE +MK +
Sbjct: 76 -------------------EYLKEEYKRDERIKNMQVMNLIREFEMKKMKESDVVKDYAA 116
Query: 131 EDVKIVEKILRTLTEKFND--IVCSI--EESKDIDSLSEE 166
+ + I +K+ R L ++F++ IV I E S +D EE
Sbjct: 117 QLLSIADKV-RLLGKEFSNEKIVQKILEETSATVDQCQEE 155
>gi|77554901|gb|ABA97697.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1639
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G HY W M + S W ++ TG D P L +++ + +
Sbjct: 53 PQFDGTHYAAWKHKMKLHLISLHPSIWKVICTGVDVPHDDMELTSEQEQLIHH----NAQ 108
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM--- 126
N + A+ + + + A EIWD ++ EG+ V+++++ L M
Sbjct: 109 ASNAILSALSPEEFNKVDGLEEAMEIWDTLQLAHEGSPAVREAKIDLLDGRLGRFVMDDK 168
Query: 127 ------------------KSGEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
+ G ED+ +V+++LR + +V I E KD L+
Sbjct: 169 ETPQEMYHRMMILVNKIKRLGSEDMTNHFVVKRLLRAFGPRNPTLVSMIRERKDFKRLT 227
>gi|147776830|emb|CAN72410.1| hypothetical protein VITISV_014973 [Vitis vinifera]
Length = 1201
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 10 PAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKMTDELKLKD 67
P +F G +Y W+ + F++ K+ WG + T ++P++ + D + + D
Sbjct: 5 PVCVKFTGTNYYTWAFQFELFLKGKDLWGHFDGTDVEKPSTFNKSQDVGS--SPSWVVLD 62
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
++ ++L +++ I+ +R +A+ +W +KK + + ++ QL E + +
Sbjct: 63 ARIMSWLLGSMEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQL-----EHAIVMFQ 117
Query: 128 SGEEDVKIVEKILRTLTEKFNDIVCS 153
G ++ TL ++ D+V +
Sbjct: 118 HGSISIQDYYSAFLTLWHEYADLVTA 143
>gi|46806458|dbj|BAD17594.1| hypothetical protein [Oryza sativa Japonica Group]
gi|46806644|dbj|BAD17724.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 178
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 54 DAHQKMTDE-LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKS 112
DA + DE ++ KD LF + +L I KK T KE W ++K ++ +VKK+
Sbjct: 110 DAIKITADEVMEKKDKAALACLFGPVPDDVLQQIAKKKTMKEAWKSLKTRYLSVDQVKKA 169
Query: 113 QLQALRREF 121
++Q L+ +F
Sbjct: 170 RVQTLKSQF 178
>gi|224089477|ref|XP_002308727.1| predicted protein [Populus trichocarpa]
gi|222854703|gb|EEE92250.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 23/97 (23%)
Query: 91 TAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE-------------------- 130
+AK++WD K+++ + R+ Q+ L REFE MK E
Sbjct: 5 SAKDVWDYPKEEYIRDERIHGMQILNLIREFELQRMKESETIKEYSNRLLAIVNKVRLLG 64
Query: 131 ---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
D +IVEKIL + E++ + ++E KD+ ++
Sbjct: 65 TTFTDSRIVEKILVAVPERYEASITTLENIKDLSKIT 101
>gi|147766883|emb|CAN67528.1| hypothetical protein VITISV_004308 [Vitis vinifera]
Length = 542
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 10 PAIPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDEL----K 64
P I + G +Y WS +++ F+ ++ G + +PAS TD L +
Sbjct: 44 PIIIKLDGSNYALWSQVVEMFISERDKLGYINGDLPQPAS-----------TDPLFRRWR 92
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKF 103
+++ VK +L +D +++ T T K++WDA+ F
Sbjct: 93 IENTIVKGWLINTMDSSLVSTFIFYPTTKKVWDAIAVTF 131
>gi|357459373|ref|XP_003599967.1| hypothetical protein MTR_3g049870 [Medicago truncatula]
gi|355489015|gb|AES70218.1| hypothetical protein MTR_3g049870 [Medicago truncatula]
Length = 267
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 34 EYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAK 93
E W ++E G D +++D + L K K+ L A+ + K TAK
Sbjct: 78 ELWDILEDGVD------LVLD-----EEGLYKKHHKIGGILVVALPHKECLKMSDKSTAK 126
Query: 94 EIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCS 153
++ ++ +EGN ++K+ + L +F+ L+ + D ++KILR+L K+ V +
Sbjct: 127 VMFASLCSNYEGNKKIKEYKATMLV-QFQILKKRYVAADH--LKKILRSLPAKWRPKVAA 183
Query: 154 IEESKDID 161
IEE++D++
Sbjct: 184 IEEARDLN 191
>gi|38347275|emb|CAE05322.2| OSJNBa0056L23.20 [Oryza sativa Japonica Group]
Length = 644
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 6 NFSQPAIPRFVGHYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDEL 63
N Q RF G M +++ +++Y W V Y P + + A +K E
Sbjct: 108 NLGQTDFLRFRGR-------MQSYIMAEDYDIWRKVSHAYVIPEA---INTAAEKTAFE- 156
Query: 64 KLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFET 123
++ K +N L I + D + TA EIW A+ +G +K+ + ++E+
Sbjct: 157 --QNCKARNILLSGISCSDYDRVVHLQTAHEIWIALSNFHQGTNNIKELRRDLFKKEYIK 214
Query: 124 LEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
+MK G K L +FN I+ + + +DS S +A + E+
Sbjct: 215 FDMKPG--------KALDDYLSRFNKILSDL---RSVDS-SYDANYPQSEI 253
>gi|77554869|gb|ABA97665.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 508
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE-- 131
+ +A+ +L T+ K+T +E W A+K + G RV+++ Q LRREF + K GE
Sbjct: 93 ILRAVPPEMLSTLAIKETVQEAWQAIKIRRIGVRRVREANEQQLRREFADMCFKDGESVD 152
Query: 132 ---------------------DVKIVEKILRTLTEKFNDIVCSIE 155
+ ++V+K+L + E I SIE
Sbjct: 153 DFSLRLCGPANNLHTLGDEITEAEVVKKLLHVVPENLQQIAISIE 197
>gi|28209475|gb|AAO37493.1| putative polyprotein [Oryza sativa Japonica Group]
gi|41393195|gb|AAS01918.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 623
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKL--KD 67
P+F G HY W M + S W +V TG D P D + +++++L ++
Sbjct: 53 PQFDGTHYAAWKHKMKLHLISLHPSIWKVVCTGLDVP------HDDMELTSEQVQLIHRN 106
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ N + A+ + + + AKEIWD ++ EG+ V++++++ L
Sbjct: 107 AQASNAILSALSPEEFNKVDGLEEAKEIWDTLQLAPEGSPAVREAKIELL 156
>gi|224066412|ref|XP_002302097.1| predicted protein [Populus trichocarpa]
gi|222843823|gb|EEE81370.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 12 IPRF-VGHYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTD---ELKLKD 67
+P F VG+Y+ WS M + + S+ W +V+ GY P + L D E + K+
Sbjct: 131 LPVFEVGNYEAWSKKMVDVLTSQHLWDIVQCGYKPPKDTTELAKWENSQKDGYREAQNKN 190
Query: 68 LKVKNYLFQAIDRTIL-DTIRKKDTAKEIWDAMKKKFEGNARVKKSQ---LQALRREFET 123
K + +A+ I+ + + D + + + K F+ K + + RE
Sbjct: 191 AKAWMLIHRAVGVKIMEEVLFASDKSTKNITGILKSFDQKRYADKPNNELIGEVLREPHM 250
Query: 124 LEMKSGEEDVKIVEKILRTLTEKFNDIVCS 153
+E+ + D V K+L+T ++K I CS
Sbjct: 251 VELVATSHD---VWKMLKTYSDKHKVIACS 277
>gi|147776421|emb|CAN74031.1| hypothetical protein VITISV_013542 [Vitis vinifera]
Length = 484
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 37/179 (20%)
Query: 62 ELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREF 121
E K + K K LF + IL + + EIW+ ++++++ N RV+ + L REF
Sbjct: 6 EKKTRKAKSKACLFSTVSPLIL----QLEFVAEIWEHLREEYQDNERVRNMHVMNLIREF 61
Query: 122 ETLEMKSGEEDVKIVEKIL------RTLTEKFND------------------IVCSIEES 157
E + M + VE++L R L +F+D + +E S
Sbjct: 62 EMVRMNESQTIKDYVEQLLTIANKVRLLGNEFSDHERVVQIFFVILPKKYEATISFLENS 121
Query: 158 KDIDSLSEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFRE 216
KD+ S++ AE+ + TL E+ +E W S H T+ QD+ FRE
Sbjct: 122 KDLSSIT-LAEL----LNTLQALEQRRLMRSTSESWLVD--SSCTNHMTYD-QDL-FRE 171
>gi|71834720|gb|AAZ41812.1| 01P13-2 [Brassica rapa subsp. pekinensis]
Length = 558
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 19 YDHWSMLMDNFMRSKEYWGLVETGYDEP----ASGSVLMDAHQKMTDELKLKDLKVKNYL 74
Y WS ++ + SK WG + TG + P G +++ ++ + +D+ V L
Sbjct: 20 YLVWSRMVKTAVGSKGLWGHITTG-EAPKLITQGGDQEEVSNEAAVEKWQQEDMLVMTVL 78
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGN 106
++D ILD ++AKE+WD + KK GN
Sbjct: 79 HASLDPAILDAYSYCESAKELWDTL-KKVHGN 109
>gi|108709179|gb|ABF96974.1| hypothetical protein LOC_Os03g33837 [Oryza sativa Japonica Group]
Length = 191
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKL--KD 67
P+F G HY W M + S W +V TG D P D + +++++L ++
Sbjct: 53 PQFDGTHYAAWKHKMKLHLISLHPSIWKVVCTGLDVP------HDDMELTSEQVQLIHRN 106
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
+ N + A+ + + + AKEIWD ++ EG+ V++++++ L
Sbjct: 107 AQASNAILSALSPEEFNKVDGLEEAKEIWDTLQLAPEGSPAVREAKIELL 156
>gi|209552794|gb|ACI62137.1| polyprotein [Drosophila melanogaster]
Length = 1319
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+YD WS+LM + + + + W +V Y +P GS + ++ + D K LF
Sbjct: 14 NYDVWSILMRSVLITADLWKVVCGQYVKPEDGS-------EDSERWNMLDQKALASLFLN 66
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL-QALRREFETLEMKSGEEDVKIV 136
+ T L I+ T+ + W + ++K QL Q L R L M G+ V+ V
Sbjct: 67 LKETQLMHIKACTTSADAWKKLCDVHLPGGPIRKVQLYQKLSR----LRMLEGDNVVQYV 122
Query: 137 EKILRTLTE 145
K T+ +
Sbjct: 123 NKFAETVNK 131
>gi|22830277|gb|AAN08660.1| putative gag-pol protein [Oryza sativa Japonica Group]
gi|78708367|gb|ABB47342.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 444
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 23/103 (22%)
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
N LF ++ + D + + A EIW+ + EG + K ++L L+ ++E + E
Sbjct: 2 NDLFNSLSKEAFDRVSNLEIAYEIWNKFVEIHEGTSEYKDAKLHFLKIQYEIFSLLLHES 61
Query: 132 -----------------------DVKIVEKILRTLTEKFNDIV 151
D+++ +K+LR LTEK+ +V
Sbjct: 62 VNDMYGRLNVIVNDLKGLGEIYTDLEVAQKMLRALTEKYETLV 104
>gi|147773391|emb|CAN60272.1| hypothetical protein VITISV_016416 [Vitis vinifera]
Length = 759
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 12 IPRFVG-HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKV 70
I RF G +Y F++ KE W ++ + PA G+ L + KD ++
Sbjct: 472 IVRFNGKNYLALEFQFRXFVKGKELWSHIDGKSEAPAGGTDLA--------QWDNKDARI 523
Query: 71 KNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
++L +I+ +++ +R AKE+W+ ++ + + ++ QL+
Sbjct: 524 VSWLLGSIEPHMVNNLRCFTIAKEMWEYLRPIYNQDNNARRFQLE 568
>gi|147788417|emb|CAN59961.1| hypothetical protein VITISV_003173 [Vitis vinifera]
Length = 174
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKI-- 135
+DR + I + + KEIW ++ EG +VK+S++ L +E MK E V++
Sbjct: 1 MDRNEYNRICQCKSTKEIWRLLEITHEGTNQVKESKINLLVHNYELFSMKENETIVEMIT 60
Query: 136 ---------------------VEKILRTLTEKFNDIVCSIEESKDIDSL 163
V KILR+L K++ V +I+E KD+ L
Sbjct: 61 RFTDIVNGLEVLGKTYKESEKVMKILRSLPSKWHTKVTAIQEVKDLTKL 109
>gi|108862627|gb|ABA98030.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1310
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 36/215 (16%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKE--YWGLVETGYDEPASGSVLMDAHQ--KMTDELKLKD 67
P F G Y W M ++S W +VE GY VL + + K D+ + K+
Sbjct: 37 PYFNGTDYAAWKHKMKMHLKSINPLIWRIVEKGY-------VLQNPVEPTKEDDKNEHKN 89
Query: 68 LKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMK 127
+ N + A+ + + + ++AK IWD ++ E V + +++ L+ +FE M
Sbjct: 90 AQAANAILSALSGSDFNRVDGIESAKVIWDTLRSLHEVTDSVSEFKVEILKGQFERFVML 149
Query: 128 SGE-------------EDVK-----------IVEKILRTLTEKFNDIVCSIEESKDIDSL 163
GE ++K +V+K++R +T + + +V I E D +L
Sbjct: 150 DGESPSDMYDRLSKIVNEIKVLGSKDMTNEVVVKKMVRAITPRNSTLVTIIRERPDYKTL 209
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRK 198
+ + +L E +E + TTS K
Sbjct: 210 TPHDLLGRILAHDMLEQESKEVIQYINQTSTTSIK 244
>gi|147795000|emb|CAN76332.1| hypothetical protein VITISV_006269 [Vitis vinifera]
Length = 850
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 42 GYDEPASGSVLM-DAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMK 100
G DE +G +M + + + K+++ + ++L +++ I + TAK+IWDA K
Sbjct: 20 GKDEYLTGEAVMPETTEPGFRKWKIENSMIMSWLINSMNNDIGENFLLFGTAKDIWDAAK 79
Query: 101 KKFEGNARVKKSQLQALRREFETLEMKSGEEDV---KIVEKILRTLTEKFNDIVCSIEES 157
+ ++ L+ + E + GE+ + K + K L + +D+ I
Sbjct: 80 XIYSSF----ENXLEXFQVELXLHXFRQGEQQIVEQKRLFKFFLGLNRELDDVRGRIMGI 135
Query: 158 KDIDSLSEE-AEVKEDEV--KTLLGAEEE 183
K + SL E +EV+ +E K ++G++E+
Sbjct: 136 KPLPSLREAFSEVRREESRKKVMMGSKEQ 164
>gi|147815780|emb|CAN77156.1| hypothetical protein VITISV_021655 [Vitis vinifera]
Length = 474
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
K+V KILR L E+F V +IEESKD+DSL
Sbjct: 18 KVVRKILRYLPERFRAKVNAIEESKDVDSL 47
>gi|108862639|gb|ABA98062.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1932
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 31/179 (17%)
Query: 13 PRFVG-HYDHWSMLMDNFMRS--KEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P+F G HY W M + S W +V TG D P L +++ + +
Sbjct: 53 PQFDGTHYAAWKHKMKLHIISLHPSIWKVVCTGIDVPYEDMELTSEQEQLIHH----NAQ 108
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS- 128
N + A+ + + + AKEIWD ++ EG+ V++++++ L M
Sbjct: 109 ASNAILSALSPEEFNKVDGLEEAKEIWDTLQLAHEGSPAVREAKIELLEGRLGRFVMDDK 168
Query: 129 --------------------GEEDVK---IVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
G ED+ +V++ LR + +V I E KD L+
Sbjct: 169 ETPQEMYDRMMILVNKIKELGSEDMTNHFVVKRFLRAFGLRNPTLVSMIWERKDFKRLT 227
>gi|18057143|gb|AAL58166.1|AC093181_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 433
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 23/103 (22%)
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
N LF ++ + D + + A EIW+ + EG + K ++L L+ ++E + E
Sbjct: 2 NDLFNSLSKEAFDRVSNLEIAYEIWNKFVEIHEGTSEYKDAKLHFLKIQYEIFSLLLHES 61
Query: 132 -----------------------DVKIVEKILRTLTEKFNDIV 151
D+++ +K+LR LTEK+ +V
Sbjct: 62 VNDMYGRLNVIVNDLKGLGEIYTDLEVAQKMLRALTEKYETLV 104
>gi|147818189|emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]
Length = 776
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+Y W+ + F++ K+ WG ++ T ++P++ D + + D ++ ++L
Sbjct: 655 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQDV--GFSPSWAVLDARIMSWLLG 712
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
+++ I+ +R +A+ +W +KK + + ++ QL+
Sbjct: 713 SVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLE 751
>gi|147843692|emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera]
Length = 154
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPA--SGSVLMDAHQKMTDELKLKDLKVKNYLF 75
+YD W + N +R+K G+++ ++P +G+ L + + + + +++F
Sbjct: 39 NYDMWEKAVKNALRAKNKLGIIDGTVNKPKGENGNEL--------NAWEACNSMIISWMF 90
Query: 76 QAIDRTILDTIRKKDTAKEIWDAMKKKFE-GNARVKKSQLQALRREFETLE 125
ID+++ ++ TAK++W+ +K+++ GNA ++ LR E L+
Sbjct: 91 NVIDKSLHSSVAYAQTAKDMWEDLKERYAVGNA----PRVHQLRSEIVNLK 137
>gi|147795051|emb|CAN69597.1| hypothetical protein VITISV_038518 [Vitis vinifera]
Length = 1893
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 38 LVETGYDEPASGSVLM-DAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIW 96
L+ G DE +G M + + + K+++ + ++L +++ I + TAK+IW
Sbjct: 633 LLGKGKDEYLTGETAMPETTEPGFRKWKIENSMIMSWLINSMNNDIGENFLLFGTAKDIW 692
Query: 97 DAMKKKFEGNARVKK-----SQLQALRREFETLEMKSGEEDVKIVE-----KILRTLTEK 146
DA K+ + + + K S L R+ +T+ KIVE K L +
Sbjct: 693 DAAKETYSSSENISKLFQVESALHDFRQGEQTVTQYYNTLTRKIVEQKRLFKFFLGLNRE 752
Query: 147 FNDIVCSIEESKDIDSLSEE-AEVKEDEV--KTLLGAEEEE 184
+D+ I K + SL E +EV+ +E K ++G++E+
Sbjct: 753 LDDVRGRIMGIKPLPSLREAFSEVRREESRKKVMMGSKEQP 793
>gi|334314744|ref|XP_001380667.2| PREDICTED: myosin-Vc [Monodelphis domestica]
Length = 1742
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 56 HQKMTDE-LKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL 114
H+ + +E ++ + ++V+N ++ ++ TIR+ +E D +KKKFE + VK S
Sbjct: 1251 HRNLEEEGIQRRTMEVQNEIYTKEKEKLIGTIRE---MQETSDHLKKKFETESEVKSSFK 1307
Query: 115 QALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEV----- 169
Q R +E K EE++ + ++I++ L ++ + ++E++ ++ + SE E
Sbjct: 1308 QEASR--LNMENKDLEEELDMKDRIIKKLQDQIKTLTKTMEKANEVHTSSEPKEYIGMME 1365
Query: 170 --KEDEVKTL 177
KEDEVK +
Sbjct: 1366 YKKEDEVKLV 1375
>gi|147785637|emb|CAN77640.1| hypothetical protein VITISV_007622 [Vitis vinifera]
Length = 314
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVE-TGYDEPASGSVLMDAHQKM--TDELKLKDLKVKNYL 74
+Y W+ + F++ K+ WG ++ T ++P++ D Q + + + D + ++L
Sbjct: 150 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPST----FDKSQDVGSSPSWVVLDAXIMSWL 205
Query: 75 FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+++ I+ ++ +A+ +W +KK R + L LR E+E++
Sbjct: 206 LGSVEPHIVTHLQPHRSAQSMWAYLKKTIHATTR-RDQFLMKLRPEYESI 254
>gi|147822071|emb|CAN63624.1| hypothetical protein VITISV_012388 [Vitis vinifera]
Length = 168
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
KV L ++DR + I + +AKEIW ++ E +VK+S++ L +E MK
Sbjct: 22 KVVYTLQCSMDRNEYNRICQCKSAKEIWRLLEITHEETNQVKESKINLLVHSYELFFMKD 81
Query: 129 GEEDVKIVE-----------------------KILRTLTEKFNDIVCSIEESKDIDSLS 164
E V+++ KILR+L K++ V +I+E+KD+ L
Sbjct: 82 NEIIVEMITRFTDIVNGLEALGKTYKEFEKLMKILRSLPSKWHTKVTTIQEAKDLTKLP 140
>gi|424964515|ref|ZP_18378596.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
P1190]
gi|402946522|gb|EJX64795.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
P1190]
Length = 769
Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K++ + L A + + + K T E A K+K E + + + Q LR E+E
Sbjct: 24 IKEINKEMNLAAAEYKNQVSAMDKDATQTEKLRAAKQKLEKQLGLAEQRSQMLREEYEKS 83
Query: 125 EMKSGE---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAE 181
++GE E K+ +++L + T + N + ++E++ D+L E+ +V D K L E
Sbjct: 84 VKETGEYSAESEKLYKQLLNSETGE-NKLRTALEQTN--DALKEQGDVSVDTAKKLQKIE 140
Query: 182 EEEEAGK 188
E E K
Sbjct: 141 ETGEKVK 147
>gi|224092631|ref|XP_002334881.1| predicted protein [Populus trichocarpa]
gi|222831996|gb|EEE70473.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y W++ N +R ++ WG + P D + + + + ++ +K++L A
Sbjct: 40 NYVEWALNAQNKIRGRKRWGFISGSKTAPN------DTNSEEYEAWEDENCLIKSWLLDA 93
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKS 112
+++ I + TAKEIWD K+ + + KS
Sbjct: 94 MNKDIRSIFLRLPTAKEIWDMAKQTYSVSQDASKS 128
>gi|357459451|ref|XP_003600006.1| hypothetical protein MTR_3g050470 [Medicago truncatula]
gi|355489054|gb|AES70257.1| hypothetical protein MTR_3g050470 [Medicago truncatula]
Length = 226
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 45/183 (24%)
Query: 12 IPRFVGHYDHWSMLMDNFMR-----SKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLK 66
+P+F G +S NF +E W ++E G G +++D + D + K
Sbjct: 33 VPKFNGDPGEFSWWNTNFYSHVMSLDEELWDILEDGI-----GDLVIDEEGAVVD--RRK 85
Query: 67 DLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEM 126
D+ + L++ D++I AKE++ ++ +EG+ +V++ + L ++E +M
Sbjct: 86 DIPDQKKLYKN-DKSI---------AKEMFASLYANYEGSKKVREPKALMLVHQYELFKM 135
Query: 127 KSGEEDVKI-----------------------VEKILRTLTEKFNDIVCSIEESKDIDSL 163
K E ++ V KILR L + V +IEE +D+++
Sbjct: 136 KDEESIEQMYLRFQTLVFGLQILKKSYVASDHVSKILRNLPARRRPKVTAIEEPRDLNTS 195
Query: 164 SEE 166
S E
Sbjct: 196 SVE 198
>gi|77549417|gb|ABA92214.1| hypothetical protein LOC_Os11g11870 [Oryza sativa Japonica Group]
Length = 276
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQA 77
+Y+ W++LM +R++ W VE G ++ H+ D + L + +
Sbjct: 111 NYNDWALLMKIKLRARCLWDAVEC-------GRAAVELHE---DRMAL------DGICST 154
Query: 78 IDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQ 115
+ ++ T+ K + KE WD +K G+ R++K+ Q
Sbjct: 155 VPPEMISTLATKASVKEAWDCIKTMRVGDDRIRKASAQ 192
>gi|147828230|emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 59 MTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEG-NARVKK 111
+ D K D +NY+ +D T+ + TAKE+WD++ KK++ +A +KK
Sbjct: 258 VVDAWKHSDFLCRNYMLNGLDNTLYNVYCSLKTAKELWDSLDKKYKTEDAGIKK 311
>gi|38347466|emb|CAE05286.2| OSJNBa0084N21.4 [Oryza sativa Japonica Group]
Length = 341
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 20/158 (12%)
Query: 19 YDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLKVKNYLFQ 76
+ HW M +++ ++ Y W V Y P + + + E +L + K N L
Sbjct: 19 FSHWYSRMQSYIMAENYDIWRKVSHPYVIPEAINT-----TALKTEFEL-NCKACNILLS 72
Query: 77 AIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIV 136
R+ D + TA EIW A+ +G + + + ++E+ EMK
Sbjct: 73 GFSRSDYDRVAHLQTAHEIWVALNNFHQGTNNIIELRRDLFKKEYIKFEMKP-------- 124
Query: 137 EKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEV 174
E+ L +FN I+ + + +DS S +A + E+
Sbjct: 125 EEALDDYLSRFNKILSDL---RSVDS-SYDANYPQSEI 158
>gi|147818293|emb|CAN66906.1| hypothetical protein VITISV_009378 [Vitis vinifera]
Length = 318
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 29 FMRSK--EYWGLVETGYDEP--ASGSVLMDAHQKMTDELKLK----DLKVKNYLFQAIDR 80
F++S + W ++E G P +++ ++ +EL K ++K L AID
Sbjct: 4 FLKSTNLDLWDVIEDGPXIPFKLENGLMVPKLKQEWNELDKKKVXLNVKEXYILHXAIDX 63
Query: 81 TILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKIL 140
+ + + +A+EIW ++ EG +VK+S++ L ++E MK E V++ + +
Sbjct: 64 NEFNRVWQCKSAREIWRLLEITLEGTNQVKESRINILVHDYELFSMKDFESIVEMFSRFM 123
Query: 141 RTLTE 145
+ E
Sbjct: 124 VIVNE 128
>gi|302144023|emb|CBI23128.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 134 KIVEKILRTLTEKFNDIVCSIEESKDIDSLS 164
KIV+KIL TL EK+ I+ S+E SKD+ ++S
Sbjct: 46 KIVQKILVTLPEKYEAIISSLENSKDLSTIS 76
>gi|31432023|gb|AAP53715.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 542
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 66 KDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLE 125
++ K +N L I R+ D + TA EIW + +G +K+ + + E+ E
Sbjct: 101 QNCKARNILLSGISRSDYDRVAHLQTAHEIWIFLSNFHQGTNNIKELRRDLFKTEYIKFE 160
Query: 126 MKSGE 130
MK GE
Sbjct: 161 MKPGE 165
>gi|357438687|ref|XP_003589620.1| Wall-associated receptor kinase [Medicago truncatula]
gi|355478668|gb|AES59871.1| Wall-associated receptor kinase [Medicago truncatula]
Length = 301
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 127 KSGEE--DVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAEEEE 184
++GE D+ +EK+L+ LT +F+ IV ++EESK++D + E +++ + K+ A +
Sbjct: 29 RNGETIIDLMKIEKVLKILTSRFHHIVVALEESKNLDEMKVE-DLQATDFKSKKVARDRA 87
Query: 185 EAGKFAEHWTTSRKGSSNCHSTWKAQD 211
+ +F+ + S G +T K +D
Sbjct: 88 DEEQFSYNEDESDAGGVLLMATIKGED 114
>gi|425004874|ref|ZP_18416159.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV102]
gi|402988317|gb|EJY03330.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV102]
Length = 769
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K++ + L A + + + K T E A K+K E + + + Q LR E+E
Sbjct: 24 IKEINKEMNLAAAEYKNQVSAMDKDATQTEKLRAAKQKLEKQLGLAEQRSQMLREEYEKS 83
Query: 125 EMKSGE---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAE 181
++GE E K+ +++L + T + N + ++E++ D+L E+ +V D K L E
Sbjct: 84 VKETGEYSAESEKLYKQLLNSETGE-NKLRTALEQTN--DALKEQGDVSVDTAKKLQKIE 140
Query: 182 EEEEAGK 188
E E K
Sbjct: 141 ETGEKVK 147
>gi|257879505|ref|ZP_05659158.1| phage minor tail protein [Enterococcus faecium 1,230,933]
gi|257881698|ref|ZP_05661351.1| phage minor tail protein [Enterococcus faecium 1,231,502]
gi|294621676|ref|ZP_06700841.1| tail tape measure protein [Enterococcus faecium U0317]
gi|424809902|ref|ZP_18235270.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
S447]
gi|424859525|ref|ZP_18283533.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
R499]
gi|424952165|ref|ZP_18367200.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
R496]
gi|424958987|ref|ZP_18373601.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
R446]
gi|424961830|ref|ZP_18376246.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
P1986]
gi|424969284|ref|ZP_18382867.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
P1140]
gi|424996322|ref|ZP_18408131.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV168]
gi|424998752|ref|ZP_18410415.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV165]
gi|425002731|ref|ZP_18414151.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV161]
gi|425011818|ref|ZP_18422683.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
E422]
gi|425019088|ref|ZP_18429474.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
C621]
gi|425031619|ref|ZP_18436740.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
515]
gi|431777113|ref|ZP_19565370.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E2560]
gi|431781421|ref|ZP_19569569.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E6012]
gi|431785052|ref|ZP_19573087.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E6045]
gi|257813733|gb|EEV42491.1| phage minor tail protein [Enterococcus faecium 1,230,933]
gi|257817356|gb|EEV44684.1| phage minor tail protein [Enterococcus faecium 1,231,502]
gi|291598841|gb|EFF29893.1| tail tape measure protein [Enterococcus faecium U0317]
gi|402918287|gb|EJX38996.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
S447]
gi|402926440|gb|EJX46479.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
R499]
gi|402927613|gb|EJX47564.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
R496]
gi|402938234|gb|EJX57257.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
R446]
gi|402942522|gb|EJX61102.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
P1986]
gi|402949109|gb|EJX67195.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
P1140]
gi|402973922|gb|EJX90005.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV168]
gi|402981915|gb|EJX97417.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV165]
gi|402982774|gb|EJX98216.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
ERV161]
gi|402995550|gb|EJY10003.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
E422]
gi|402999340|gb|EJY13536.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
C621]
gi|403015321|gb|EJY28236.1| phage tail tape measure protein, TP901 family [Enterococcus faecium
515]
gi|430640054|gb|ELB75908.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E2560]
gi|430648608|gb|ELB84014.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E6045]
gi|430649782|gb|ELB85150.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E6012]
Length = 769
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K++ + L A + + + K T E A K+K E + + + Q LR E+E
Sbjct: 24 IKEINKEMNLAAAEYKNQVSAMDKDATQTEKLRAAKQKLEKQLGLAEQRSQMLREEYEKS 83
Query: 125 EMKSGE---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAE 181
++GE E K+ +++L + T + N + ++E++ D+L E+ +V D K L E
Sbjct: 84 VKETGEYSAESEKLYKQLLNSETGE-NKLRTALEQTN--DALKEQGDVSVDTAKKLQKIE 140
Query: 182 EEEEAGK 188
E E K
Sbjct: 141 ETGEKVK 147
>gi|4512618|gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 18 HYDHWSMLMDNFMRSKEYWGLVETGYDEPA------SGSVLMDAHQKMTDELKLKDLKVK 71
+Y W ++ + S++ G V + P+ +G V + + + D V+
Sbjct: 25 NYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESWFCTDQLVR 84
Query: 72 NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEE 131
++LF + +L + T+++IW ++ + F ++ ++ +LR+ + L K E+
Sbjct: 85 SWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREF---SLRQNLQLLSKK--EK 139
Query: 132 DVKIVEKILRTLTEKFNDIVCSIEESKDI 160
+ + +T+ + + I ++ES I
Sbjct: 140 PFSVYCREFKTICDALSSIGKPVDESMKI 168
>gi|218184645|gb|EEC67072.1| hypothetical protein OsI_33832 [Oryza sativa Indica Group]
Length = 232
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 50 SVLMDAHQKMTDELKLKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARV 109
S+ M A T++L + V + + + + +L ++ +K+T E+W+A++ +V
Sbjct: 9 SMAMQAVDPGTNDL-CSNCTVLSTILCVVPQDVLTSLAQKETTHEVWEAIRAVCVSVEQV 67
Query: 110 KKSQLQALRREFETLEMKS---------GEEDVKIVEKILRTLTEKFNDIVCSIEESKDI 160
++ +Q LR++F + K D ++++K+L + E + SIE D+
Sbjct: 68 -EANVQKLRQDFAAIAFKPESTSRTSRSASPDKEVIKKMLEVVLEYHKQVAISIETILDL 126
Query: 161 DSLSEE 166
++S E
Sbjct: 127 GTVSIE 132
>gi|431651825|ref|ZP_19523754.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E1904]
gi|430600878|gb|ELB38504.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecium E1904]
Length = 767
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 65 LKDLKVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETL 124
+K++ + L A + + + K T E A K+K E + + + Q LR E+E
Sbjct: 24 IKEINKEMNLAAAEYKNQVSAMDKDATQTEKLRAAKQKLEKQLGLAEQRSQMLREEYEKS 83
Query: 125 EMKSGE---EDVKIVEKILRTLTEKFNDIVCSIEESKDIDSLSEEAEVKEDEVKTLLGAE 181
++GE E K+ +++L + T + N + ++E++ D+L E+ +V D K L E
Sbjct: 84 VKETGEYSAESEKLYKQLLNSETGE-NKLRTALEQTN--DALKEQGDVSVDTAKKLQKIE 140
Query: 182 EEEEAGK 188
E E K
Sbjct: 141 ETGEKIK 147
>gi|449682649|ref|XP_004210135.1| PREDICTED: uncharacterized protein LOC101238750, partial [Hydra
magnipapillata]
Length = 880
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 81 TILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKIL 140
T L + D KE + KK + VKKSQ++ +R + + S +ED++ E +
Sbjct: 529 TSLPLLEISDGHKEQKNEFDKKVSAKSDVKKSQVKISQRGAQQVSQYSAKEDIESNELEI 588
Query: 141 RTLTEKFNDIVCSIEESKDIDSLSEEAEVKE 171
+ L E + + +IE+ K++D+L E++ K+
Sbjct: 589 KILNEAMHKALITIEQQKNLDTLVEDSSKKK 619
>gi|73538740|ref|YP_299107.1| hypothetical protein Reut_B4915 [Ralstonia eutropha JMP134]
gi|72122077|gb|AAZ64263.1| PAS [Ralstonia eutropha JMP134]
Length = 1384
Score = 36.6 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 97 DAMKKKFEGNARVKKSQLQAL--RREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSI 154
D M + EG + K QLQA + E T E+K+ E+++ + + LR+ TE+ +
Sbjct: 680 DPMVSQLEGELQRTKEQLQATIEQSETSTEELKASNEELQAINEELRSATEE-------L 732
Query: 155 EESK-DIDSLSEEAEVKEDEVKTLLGAEEEEEAGK 188
E SK ++ S++EE E+K+ + EE GK
Sbjct: 733 ETSKEELQSINEELTTVNAELKS-----KVEETGK 762
>gi|377655441|gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
L A+ +L ++ +K+TAKEIWD + K +E + K L+R+ TL M E
Sbjct: 58 LHLALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKI---FLKRKLYTLRMA---EST 111
Query: 134 KIVEKI--LRTLTEKFNDIVCSIEES 157
+ + I L+TL + + +IEE+
Sbjct: 112 MVTDHINTLKTLFSQLTTLGHNIEEN 137
>gi|429333886|ref|ZP_19214569.1| two-component hybrid sensor and regulator [Pseudomonas putida
CSV86]
gi|428761409|gb|EKX83640.1| two-component hybrid sensor and regulator [Pseudomonas putida
CSV86]
Length = 1373
Score = 36.6 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 74 LFQAIDRTILDTIRK-KDTAKEIWDAMKKKFEGNARVKKSQLQAL--RREFETLEMKSGE 130
LF ++ T+ ++ +D K D++ + EG K QLQA + E T E+K+
Sbjct: 642 LFDEVEETMSAEVKSIRDDGK---DSVLSQLEGELHRTKEQLQATVEQSETSTEELKASN 698
Query: 131 EDVKIVEKILRTLTEKFNDIVCSIEESK-DIDSLSEEAEVKEDEVKTLLGAEEEEEAGK 188
E+++ + + LR+ TE+ +E SK ++ S++EE E+K+ + EE GK
Sbjct: 699 EELQAINEELRSTTEE-------LETSKEELQSINEELITVNQELKS-----KVEETGK 745
>gi|377655443|gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 74 LFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGEEDV 133
L A+ +L ++ +K+TAKEIWD + K +E + K L+R+ TL M E
Sbjct: 58 LHLALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKI---FLKRKLYTLRMA---EST 111
Query: 134 KIVEKI--LRTLTEKFNDIVCSIEES 157
+ + I L+TL + + +IEE+
Sbjct: 112 MVTDHINTLKTLFSQLTTLGHNIEEN 137
>gi|356507554|ref|XP_003522529.1| PREDICTED: uncharacterized protein LOC100801513 [Glycine max]
Length = 146
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 135 IVEKILRTLTEKFNDIVCSIEESKDIDS 162
I++K+LRTLT +F+ + EESKD+DS
Sbjct: 96 IIDKVLRTLTPRFDHVAVETEESKDLDS 123
>gi|147810094|emb|CAN75836.1| hypothetical protein VITISV_004968 [Vitis vinifera]
Length = 619
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 69 KVKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKS 128
+V +F AI I AK+ WD + +G+ VK S+LQ L FET+ M+
Sbjct: 500 RVXYSIFNAISMDEFRRIATCTLAKKAWDIFQXTHKGSNAVKVSKLQMLTSMFETIRMED 559
Query: 129 GEEDVKIVEKILRTLTEKFN--DIVCSIEESKDIDSLSEEAE 168
E + K++ FN + IEE LSE E
Sbjct: 560 HENFGEFHAKLMDIGNSSFNLAFMASVIEEPLKKXVLSESCE 601
>gi|189237561|ref|XP_974680.2| PREDICTED: similar to GA19426-PA [Tribolium castaneum]
Length = 531
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 56 HQKMTDELKLKDLKVKNYL-FQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQL 114
H + D+ +L K + L F + +++D +R D KEI D ++KF + ++ S+L
Sbjct: 357 HPNLLDDPELIAGKHRTLLTFTSYMTSVIDYVRPSDLKKEINDKFREKFP-HIQLTLSKL 415
Query: 115 QALRREFETLEMKSGEEDVKIVEK--------ILRTLTEKFNDIVCSIEESKDIDSLSEE 166
++++RE + D+ V + ILR L K N +C+ + ++
Sbjct: 416 RSIKREMRKIAKTECNIDLVTVAQAYVYFEKLILRGLINKQNRKLCA---GASLILSAKL 472
Query: 167 AEVKEDEVKTLL 178
+VK D +KTLL
Sbjct: 473 NDVKGDGLKTLL 484
>gi|15217348|gb|AAK92686.1|AC090714_19 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|62733511|gb|AAX95628.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709319|gb|ABF97114.1| hypothetical protein LOC_Os03g36370 [Oryza sativa Japonica Group]
Length = 400
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 27/123 (21%)
Query: 62 ELKLKDLKVK----NYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQAL 117
E+ L +L++ N F ++ + D + TA EIW+ + + EG + K ++L L
Sbjct: 110 EIDLHNLQLNAQAMNAWFNSLSQEEFDRVSNLATAYEIWNKLAEIHEGTSEYKDAKLHFL 169
Query: 118 RREFETLEMKSGEE-----------------------DVKIVEKILRTLTEKFNDIVCSI 154
+ ++ T M E D+++ +K+LR+L EK+ +V +
Sbjct: 170 KIQYVTFSMLPHESVNDMYGRLNVIVNDLKGLGATYTDLEVAQKMLRSLQEKYETLVTML 229
Query: 155 EES 157
S
Sbjct: 230 INS 232
>gi|147807788|emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]
Length = 1146
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 24/74 (32%)
Query: 94 EIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSGE----------------------- 130
E+ +A +K + ++K +LQALR+EFE L+MK GE
Sbjct: 356 ELTEAQQKSIT-DQKLKDLKLQALRKEFEVLQMKEGESVDAYFTRTLIIANKMKIHGENM 414
Query: 131 EDVKIVEKILRTLT 144
+ V I+EKILR++T
Sbjct: 415 QQVVIIEKILRSMT 428
>gi|315056167|ref|XP_003177458.1| fibronectin type III domain-containing protein [Arthroderma gypseum
CBS 118893]
gi|311339304|gb|EFQ98506.1| fibronectin type III domain-containing protein [Arthroderma gypseum
CBS 118893]
Length = 1094
Score = 36.2 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 104 EGNARVKKSQLQALRREFETLEMKSGEEDVKIVEKILRTLTEKFNDIVCSIEESKDIDSL 163
EG+ + +L+ L++E E+L+ + +ED K E++LR L ++ ND+ ++E D
Sbjct: 233 EGSLKQLAERLKVLQQENESLDKQLAQED-KEYEQLLRELEDQRNDLKQRVKEKDDATGD 291
Query: 164 SEEAEVKEDEVKTLLGAEEEEEAGKFAEHWTTSRKGSSNCHSTWKAQDVSFRERV 218
+ K + V + +E+ + K + RK S + W ++V R+ +
Sbjct: 292 LRKHINKLESVNRTVQSEKSKRE-KLLQQREAERKKRSEDIARWDEREVEIRDEL 345
>gi|357504503|ref|XP_003622540.1| hypothetical protein MTR_7g045090 [Medicago truncatula]
gi|355497555|gb|AES78758.1| hypothetical protein MTR_7g045090 [Medicago truncatula]
Length = 294
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 48/207 (23%)
Query: 13 PRFVG-HYDHWSMLMDNFMRSKEY--WGLVETGYDEPASGSVLMDAHQKMTDELKLKDLK 69
P F G +Y W M+ F+RS++ W ++ G P + + +T E
Sbjct: 17 PFFNGKNYYFWKGKMELFLRSQDVDMWKIITNGDHIPMTTDATTKV-ETLTPEASWSKED 75
Query: 70 VKNYLFQAIDRTILDTIRKKDTAKEIWDAMKKKFEGNARVKKSQLQALRREFETLEMKSG 129
K L + ++WD +K E + +K++++ R+FE EM
Sbjct: 76 KKKVLLNS----------------KVWDTLKIHHEETSHIKETRIDIGVRKFEIFEMNED 119
Query: 130 EEDVKI-----------------------VEKILRTLTEKFNDIVCSIEESKDIDSLSEE 166
E ++ + KILR L + +V +I ++KD++SL+ E
Sbjct: 120 ENIDEMYSRFTSIVNELRSLGKTYTTHDRIRKILRCLPSTWRPMVTAITQAKDLNSLALE 179
Query: 167 ---AEVKEDEVKTLLGAEEEEEAGKFA 190
+K E TLL ++ GK
Sbjct: 180 DLIGSLKAHE--TLLQDDKPSRKGKMG 204
>gi|432337899|ref|ZP_19589063.1| acetyl-CoA acetyltransferase [Rhodococcus wratislaviensis IFP 2016]
gi|430775428|gb|ELB90944.1| acetyl-CoA acetyltransferase [Rhodococcus wratislaviensis IFP 2016]
Length = 377
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 120 EFETLEMKSGEEDVKIVEKILRTLTEK--FNDIVCSIEESKDID----SLSEEAEVKEDE 173
EFE + M + +V IVE + LT++ + I C + K +D L + A++ EDE
Sbjct: 2 EFEVIPMTN---EVVIVEAVRSPLTQRQLYGRIHCELAAEKLLDVTVNGLLQRAKIDEDE 58
Query: 174 VKTLLGAEEEEEAGKFAEHW 193
+ T++ +E + + AE W
Sbjct: 59 ITTVVTVGDEAASRRHAESW 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,426,156,047
Number of Sequences: 23463169
Number of extensions: 139030926
Number of successful extensions: 539550
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 1881
Number of HSP's that attempted gapping in prelim test: 534978
Number of HSP's gapped (non-prelim): 5131
length of query: 222
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 85
effective length of database: 9,144,741,214
effective search space: 777303003190
effective search space used: 777303003190
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)