BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043998
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1
Length = 220
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G C +R Q + + D NSHHAQEAL RAKFKFP RQKIIVSRKWGFTKF+R DY+
Sbjct: 124 GTC-ARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYI 182
Query: 89 RWKSENRM 96
+WKS+NR+
Sbjct: 183 KWKSQNRI 190
>sp|P93847|RL10_SOLME 60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1
Length = 219
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G+C +R Q + + D NS+HAQEAL RAKFKFP RQKIIVSRKWGFTKFSR DYL
Sbjct: 124 GVC-ARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYL 182
Query: 89 RWKSENRM 96
++KSENR+
Sbjct: 183 KYKSENRI 190
>sp|Q40592|RL10_TOBAC 60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10
PE=2 SV=1
Length = 150
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G+C +R Q + + D N++HAQEAL RAKFKFP RQKIIVSRKWGFTKFSR DYL
Sbjct: 53 GVC-ARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYL 111
Query: 89 RWKSENRM 96
++KSENR+
Sbjct: 112 KYKSENRI 119
>sp|Q9M5M7|RL10_EUPES 60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1
Length = 220
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G+C +R Q + + D+NSH+AQEAL RAKFKFP RQKIIVSRKWGFTK +RADY
Sbjct: 124 GVC-ARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYP 182
Query: 89 RWKSENRM 96
R KSENR+
Sbjct: 183 RLKSENRI 190
>sp|O22431|RL10_PINTA 60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1
Length = 228
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G C +R Q + + D++S+HAQEAL RAKFKFP R+KIIV+RKWGFTK++RADYL
Sbjct: 124 GTC-ARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYL 182
Query: 89 RWKSENRM 96
+WK+ENR+
Sbjct: 183 KWKTENRI 190
>sp|P45633|RL10_MAIZE 60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1
Length = 220
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G C +R Q + + D+N+ HA EAL RAKFKFP RQKII SRKWGFTKFSRADYL
Sbjct: 124 GTC-ARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYL 182
Query: 89 RWKSENRM 96
++KSE R+
Sbjct: 183 KYKSEGRI 190
>sp|Q08770|RL102_ARATH 60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2
SV=2
Length = 221
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 27 SMGICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRAD 86
++G C +R Q + + D++ HHAQEAL RAKFKFP RQKIIVSRKWGFTKF+RAD
Sbjct: 122 ALGTC-ARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180
Query: 87 YLRWKSENRM 96
Y + + E R+
Sbjct: 181 YTKLRQEKRI 190
>sp|Q93VT9|RL101_ARATH 60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=1
SV=1
Length = 220
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 27 SMGICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRAD 86
++G C +R Q + + D++ HHAQEAL RAKFKFP RQKIIVSRKWGFTKF+RAD
Sbjct: 122 ALGTC-ARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180
Query: 87 YLRWKSENRM 96
+ + + E R+
Sbjct: 181 FTKLRQEKRV 190
>sp|Q0ITS8|RL101_ORYSJ 60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34
PE=2 SV=1
Length = 224
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G C +R Q + + +SN+ HA+EAL RAKFKFP RQKII SRKWGFTKF+R +Y+
Sbjct: 124 GTC-ARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYV 182
Query: 89 RWKSENRM 96
+ K+E R+
Sbjct: 183 KLKAEGRI 190
>sp|A2ZCQ7|RL101_ORYSI 60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34
PE=2 SV=2
Length = 224
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G C +R Q + + +SN+ HA+EAL RAKFKFP RQKII SRKWGFTKF+R +Y+
Sbjct: 124 GTC-ARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYV 182
Query: 89 RWKSENRM 96
+ K+E R+
Sbjct: 183 KLKAEGRI 190
>sp|Q93W22|RL103_ARATH 60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2
SV=1
Length = 221
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 27 SMGICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRAD 86
++G C +R Q + + D++ HAQEAL RAKFKFP RQKIIVSRKWGFTKF+RA+
Sbjct: 122 ALGTC-ARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180
Query: 87 YLRWKSENRM 96
Y + ++ R+
Sbjct: 181 YTKLRAMKRI 190
>sp|Q0DKF0|RL102_ORYSJ 60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12
PE=2 SV=1
Length = 219
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G C +R Q + + +N+ HA EAL RAKFKFP RQKII SRKWGFTKFSR +Y+
Sbjct: 124 GTC-ARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYV 182
Query: 89 RWKSENRM 96
R KSE R+
Sbjct: 183 RLKSEGRI 190
>sp|A2Y0T4|RL102_ORYSI 60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12
PE=2 SV=2
Length = 219
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 29 GICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYL 88
G C +R Q + + +N+ HA EAL RAKFKFP RQKII SRKWGFTKFSR +Y+
Sbjct: 124 GTC-ARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYV 182
Query: 89 RWKSENRM 96
R KSE R+
Sbjct: 183 RLKSEGRI 190
>sp|Q09533|RL10_CAEEL 60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=3
SV=1
Length = 214
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R +F + + N HA EA RAKFKFP RQ I+ SRKWGFTK+ R DY R ++
Sbjct: 127 ARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTKWDREDYERMRA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EGRL 190
>sp|O61231|RL10_DROME 60S ribosomal protein L10 OS=Drosophila melanogaster GN=RpL10 PE=2
SV=1
Length = 218
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R + Q I + D EAL RAKFKFP RQKI VS+KWGFTK+ R Y +
Sbjct: 127 ARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRD 186
Query: 93 ENRMS 97
+NR+
Sbjct: 187 DNRLE 191
>sp|Q54J69|RL10_DICDI 60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=1
SV=2
Length = 217
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q IF + D+ + EAL R+ +KFP RQKI+VS+KWGFT ++R Y + K+
Sbjct: 127 ARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLKA 186
Query: 93 ENRM 96
+ R+
Sbjct: 187 DGRL 190
>sp|O96647|RL10_BOMMA 60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1
Length = 219
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R + Q I + D EAL RAKFKFP RQKI VS+KWGFTK+ R ++ + +
Sbjct: 127 ARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLRE 186
Query: 93 ENRMS 97
E R++
Sbjct: 187 EGRLA 191
>sp|P41805|RL10_YEAST 60S ribosomal protein L10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL10 PE=1 SV=1
Length = 221
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLR 89
+R Q IF + DSN E L RA++KFP +QKII+S+KWGFT R +YL+
Sbjct: 127 ARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLK 183
>sp|A8D8X1|RL10_SHEEP 60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1
Length = 214
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|Q29195|RL10_PIG 60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3
Length = 214
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|Q9XSI3|RL10_BOVIN 60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4
Length = 214
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|Q6PDV7|RL10_RAT 60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3
Length = 214
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|A9CB60|RL10_PAPAN 60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1
Length = 214
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|Q6ZWV3|RL10_MOUSE 60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3
Length = 214
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|P27635|RL10_HUMAN 60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4
Length = 214
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|Q5R931|RL10_PONAB 60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3
Length = 214
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|Q4R7Y2|RL10_MACFA 60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1
Length = 214
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA 186
Query: 93 ENRM 96
E R+
Sbjct: 187 EKRL 190
>sp|Q08200|RL10_CHICK 60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2
SV=1
Length = 210
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ + +
Sbjct: 122 ARVHMGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEEMVA 181
Query: 93 ENRM 96
+ R+
Sbjct: 182 QKRL 185
>sp|Q235M8|RL10_TETTS 60S ribosomal protein L10 OS=Tetrahymena thermophila (strain SB210)
GN=RPL10 PE=1 SV=1
Length = 215
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R +F + + + +A +AL RAK KFP RQK++ S+KWGFTK +RA Y R ++
Sbjct: 127 ARVDIGSILFSVRVKEPHVKYAIDALTRAKAKFPGRQKVVTSQKWGFTKLTRAQYSRLRN 186
Query: 93 ENRM 96
+ ++
Sbjct: 187 QKKL 190
>sp|Q4R4D3|RL10L_MACFA 60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L
PE=2 SV=1
Length = 214
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++ +
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVA 186
Query: 93 ENRM 96
+ R+
Sbjct: 187 KKRL 190
>sp|Q96L21|RL10L_HUMAN 60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3
Length = 214
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADY 87
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++
Sbjct: 127 ARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEF 181
>sp|Q2TBW8|RL10L_BOVIN 60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1
Length = 214
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADY 87
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEF 181
>sp|P86048|RL10L_MOUSE 60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1
Length = 214
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADY 87
+R Q I + N H EAL RAKFKFP RQKI +S+KWGFTKF+ ++
Sbjct: 127 ARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEF 181
>sp|Q9P769|RL10B_SCHPO 60S ribosomal protein L10-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl10b PE=3 SV=1
Length = 221
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q + + DS+ A EAL R ++KFP +Q+IIVS+KWGF++++R +Y+ +S
Sbjct: 127 ARVNIGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRS 186
Query: 93 ENRM 96
+
Sbjct: 187 RGEI 190
>sp|Q09127|RL10A_SCHPO 60S ribosomal protein L10-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl10a PE=2 SV=2
Length = 221
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKS 92
+R Q + + DS+ A EAL R ++KFP +Q+IIVS+KWGF++++R +Y+ +S
Sbjct: 127 ARVNIGQILMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRS 186
Query: 93 ENRM 96
+
Sbjct: 187 RGEI 190
>sp|Q39724|RL10_EUGGR 60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1
Length = 215
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 57 ALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKSENR 95
AL RA +KF RQ I S WGFT+ +Y++WK E +
Sbjct: 151 ALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEGK 189
>sp|Q8SR96|RL10_ENCCU 60S ribosomal protein L10 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL10 PE=1 SV=1
Length = 219
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 39 QTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWKSENRMSW 98
Q I + +S A EAL RAK KFP QKI VS K+GFT ++ + R+
Sbjct: 133 QPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESGRIIL 192
Query: 99 SFG 101
G
Sbjct: 193 RGG 195
>sp|A6USY4|RL10_META3 50S ribosomal protein L10e OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl10e PE=3 SV=1
Length = 173
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTK 81
+R + Q I + N HA+EAL R K PV+ KI++ + K
Sbjct: 124 ARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKCKIVIGKGAELVK 172
>sp|Q32N25|GRP2A_XENLA RAS guanyl-releasing protein 2-A OS=Xenopus laevis GN=rasgrp2-a
PE=2 SV=1
Length = 594
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 30 ICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFP 66
+CQ K ++++F+LF D + H +QE + FP
Sbjct: 415 LCQHIEKMVESVFRLFDEDGDGHISQEEFQSVRSNFP 451
>sp|Q6DCK3|GRP2B_XENLA RAS guanyl-releasing protein 2-B OS=Xenopus laevis GN=rasgrp2-b
PE=2 SV=1
Length = 594
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 30 ICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFP 66
+CQ K ++++F+LF D + H +QE + FP
Sbjct: 415 LCQHIEKMVESVFRLFDEDGDGHISQEEFQSVRSNFP 451
>sp|A8MDE4|RL10_CALMQ 50S ribosomal protein L10e OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rpl10e
PE=3 SV=1
Length = 175
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 48 DSNSHHAQEALHRAKFKFPVRQKIIVSRK 76
D N HA+EAL+RA+ K P+ +I ++RK
Sbjct: 142 DRNITHAKEALNRARAKLPLPCRIELTRK 170
>sp|Q9LXS6|CISY2_ARATH Citrate synthase 2, peroxisomal OS=Arabidopsis thaliana GN=CSY2
PE=2 SV=1
Length = 514
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 7 HRAKEKQRPSVIQRQQSNQSSMGICQSRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFP 66
H A + +IQ + MG+ S AL +FHPD+N + + ++++K
Sbjct: 163 HSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALS----IFHPDANPALSGQDIYKSK---Q 215
Query: 67 VRQKIIVSRKWGFTKFSRADYLR 89
VR K IV + A YLR
Sbjct: 216 VRDKQIVRILGKAPTIAAAAYLR 238
>sp|O27191|RL10_METTH 50S ribosomal protein L10e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl10e PE=3 SV=1
Length = 160
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 39 QTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKWGFTK 81
Q I + N A+EAL RA KFPV +I++ R K
Sbjct: 118 QKIITIETNKKNFKDAKEALRRAAMKFPVPCRIVIDRGEELVK 160
>sp|A1RXM2|RL10_THEPD 50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5)
GN=rpl10e PE=3 SV=1
Length = 168
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 33 SRFKALQTIFKLFHPDSNSHHAQEALHRAKFKFPVRQKIIV 73
+R +A Q + + N HA+EAL RA K P+ +IIV
Sbjct: 124 ARVEAGQIVMLVKVDAKNIDHAKEALRRAASKIPLPSRIIV 164
>sp|B1YDH6|RL10_PYRNV 50S ribosomal protein L10e OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl10e PE=3 SV=1
Length = 182
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 33 SRFKALQTIFKL-FHPDSNSHHAQEALHRAKFKFPVRQKIIVSRKW 77
+R +A Q IF F P+ +H +EAL RA K P+ +I++ K
Sbjct: 128 ARVEAGQVIFYAEFKPEHVAHM-KEALRRASTKLPLPTRIVIEAKG 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.129 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,086,348
Number of Sequences: 539616
Number of extensions: 1012750
Number of successful extensions: 3404
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3360
Number of HSP's gapped (non-prelim): 47
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)